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Conserved domains on  [gi|1935448371|ref|YP_009947919|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Coenomyia ferruginea]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 3-308 1.87e-152

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 429.19  E-value: 1.87e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   3 YLISFIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFS 82
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  83 LFLSLLVWMCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLIM 162
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 163 GYSLFNFYFYQVYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLF 242
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1935448371 243 SVIFLGGDIYSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMFFIGLSVFI 308
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 3-308 1.87e-152

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 429.19  E-value: 1.87e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   3 YLISFIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFS 82
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  83 LFLSLLVWMCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLIM 162
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 163 GYSLFNFYFYQVYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLF 242
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1935448371 243 SVIFLGGDIYSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMFFIGLSVFI 308
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
11-300 6.37e-99

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 293.22  E-value: 6.37e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  11 LLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSLFLSLLVW 90
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  91 MCIPL--FVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLIMGYSLFN 168
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 169 FYFYQVYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFSVIFLG 248
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1935448371 249 G------DIYSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMF 300
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-295 7.05e-92

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 276.24  E-value: 7.05e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   1 MEYLISFIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPI 80
Cdd:COG1005     6 APLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPI 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  81 FSLFLSLLVWMCIPLF--VKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFV 158
Cdd:COG1005    86 LAFIPALLAFAVIPFGpgLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVV 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 159 FLIMGYSLFNFYFYQV-YLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILF 237
Cdd:COG1005   166 LLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFL 245

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 238 MSMLFSVIFLGG------------DIYSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSL 295
Cdd:COG1005   246 VSALATTLFLGGwlgpfpilplggLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 3-308 1.87e-152

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 429.19  E-value: 1.87e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   3 YLISFIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFS 82
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  83 LFLSLLVWMCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLIM 162
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 163 GYSLFNFYFYQVYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLF 242
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1935448371 243 SVIFLGGDIYSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMFFIGLSVFI 308
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 6-305 6.33e-132

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 377.07  E-value: 6.33e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   6 SFIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSLFL 85
Cdd:MTH00225    3 FLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLIL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  86 SLLVWMCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLIMGYS 165
Cdd:MTH00225   83 SLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYN 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 166 LFNFYFYQVYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFSVI 245
Cdd:MTH00225  163 LFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSIL 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1935448371 246 FLGG--DIYSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMFFIGLS 305
Cdd:MTH00225  243 FFGGffVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIIL 304
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 4-305 6.40e-125

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 359.57  E-value: 6.40e-125
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   4 LISFIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSL 83
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  84 FLSLLVWMCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLIMG 163
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 164 YSLFNFYFYQVYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFS 243
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1935448371 244 VIFLGGD-----IYSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMFFIGLS 305
Cdd:MTH00143  241 VLFFGGSsvlflLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-311 2.28e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 338.52  E-value: 2.28e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   1 MEYLISFIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPI 80
Cdd:MTH00071    2 MTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPT 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  81 FSLFLSLLVWMCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFL 160
Cdd:MTH00071   82 MALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILL 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 161 IMGYSLFNFYFYQVYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSM 240
Cdd:MTH00071  162 TGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNT 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1935448371 241 LFSVIFLGG-------DIYSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMFFIGLSVFILSL 311
Cdd:MTH00071  242 LSTILFLGStynhlqpELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGI 319
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 4-311 3.23e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 333.02  E-value: 3.23e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   4 LISFIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSL 83
Cdd:MTH00111    5 LLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILAL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  84 FLSLLVWMCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLIMG 163
Cdd:MTH00111   85 LLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGG 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 164 YSLFNFYFYQVYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFS 243
Cdd:MTH00111  165 YTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTT 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1935448371 244 VIFL-------GGDIYSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMFFIGLSVFILSL 311
Cdd:MTH00111  245 ILFLnpstlnlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGL 319
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 4-311 1.93e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 330.72  E-value: 1.93e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   4 LISFIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSL 83
Cdd:MTH00218    2 LLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILAL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  84 FLSLLVWMCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLIMG 163
Cdd:MTH00218   82 TLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGG 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 164 YSLFNFYFYQVYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFS 243
Cdd:MTH00218  162 FSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSV 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1935448371 244 VIFLGGDIYSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMFFIGLSVFILSL 311
Cdd:MTH00218  242 ILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASL 309
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-311 1.54e-112

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 328.51  E-value: 1.54e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   7 FIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSLFLS 86
Cdd:MTH00104    3 MINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLA 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  87 LLVWMCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLIMGYSL 166
Cdd:MTH00104   83 LTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTL 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 167 FNFYFYQVYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFSVIF 246
Cdd:MTH00104  163 STLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILF 242

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1935448371 247 LGG-------DIYSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMFFIGLSVFILSL 311
Cdd:MTH00104  243 LGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 4-304 6.11e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 313.99  E-value: 6.11e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   4 LISFIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSL 83
Cdd:MTH00195    2 MISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLAL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  84 FLSLLVWMCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLIMG 163
Cdd:MTH00195   82 ALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 164 YSLFNFYFYQVYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFS 243
Cdd:MTH00195  162 FDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTT 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1935448371 244 VIFLGGDiYSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMFFIGL 304
Cdd:MTH00195  242 ILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAI 301
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 4-306 1.23e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 313.85  E-value: 1.23e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   4 LISFIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSL 83
Cdd:MTH00134    6 ITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLAL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  84 FLSLLVWMCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLIMG 163
Cdd:MTH00134   86 TLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGG 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 164 YSLFNFYFYQVYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFS 243
Cdd:MTH00134  166 FTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSA 245

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 244 VIFLGGDIYSLFFYL-------KLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMFFIGLSV 306
Cdd:MTH00134  246 ILFLGASHIPTLPELttinlmtKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPI 315
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 5-309 4.32e-104

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 306.71  E-value: 4.32e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   5 ISFIGSLLL-IICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSL 83
Cdd:MTH00010    3 ISFFISILLsYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  84 FLSLLVWMCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLIMG 163
Cdd:MTH00010   83 ILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQT 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 164 YSLFNFYFYQvYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSmLFS 243
Cdd:MTH00010  163 FSFSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMS-LFT 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1935448371 244 VIFLGGDIYSLFFY-----LKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMFFIGLSVFIL 309
Cdd:MTH00010  241 SVFFTSFIPSIFISdlmliLKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 1-308 1.95e-103

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 305.75  E-value: 1.95e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   1 MEYLISFIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPI 80
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  81 FSLFLSLLVWMCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFL 160
Cdd:MTH00040   81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 161 IMGYSLFNFYFYQVYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSM 240
Cdd:MTH00040  161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1935448371 241 LFSVIFLGGD--------IYSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMFFIGLSVFI 308
Cdd:MTH00040  241 LSVILFLGGGspfneifpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
NADHdh pfam00146
NADH dehydrogenase;
11-300 6.37e-99

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 293.22  E-value: 6.37e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  11 LLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSLFLSLLVW 90
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  91 MCIPL--FVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLIMGYSLFN 168
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 169 FYFYQVYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFSVIFLG 248
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1935448371 249 G------DIYSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMF 300
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-295 7.05e-92

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 276.24  E-value: 7.05e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   1 MEYLISFIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPI 80
Cdd:COG1005     6 APLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPI 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  81 FSLFLSLLVWMCIPLF--VKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFV 158
Cdd:COG1005    86 LAFIPALLAFAVIPFGpgLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVV 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 159 FLIMGYSLFNFYFYQV-YLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILF 237
Cdd:COG1005   166 LLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFL 245

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 238 MSMLFSVIFLGG------------DIYSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSL 295
Cdd:COG1005   246 VSALATTLFLGGwlgpfpilplggLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
4-295 5.56e-86

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 260.89  E-value: 5.56e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   4 LISFIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSL 83
Cdd:PRK06076   10 LLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAF 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  84 FLSLLVWMCIPLF--VKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLI 161
Cdd:PRK06076   90 IPAFLAWAVIPFGpeLVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLA 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 162 MGYSLFNFYFYQVYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSML 241
Cdd:PRK06076  170 GSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSAL 249

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1935448371 242 FSVIFLGG----------DIYSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSL 295
Cdd:PRK06076  250 ITTLFLGGwlppfplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 8-304 1.52e-85

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 260.05  E-value: 1.52e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   8 IGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSLFLSL 87
Cdd:MTH00216   10 IKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLAL 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  88 LVWMCIPL--FVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLIMGYS 165
Cdd:MTH00216   90 IVWGVIPYerGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLS 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 166 LFNFYFYQV-YLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFSV 244
Cdd:MTH00216  170 ITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTI 249

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1935448371 245 IFLGG--------DIYSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMFFIGL 304
Cdd:MTH00216  250 LFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 4-304 4.43e-85

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 258.89  E-value: 4.43e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   4 LISFIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSL 83
Cdd:MTH00054    2 GIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  84 FLSLLVWMCIPL--FVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLI 161
Cdd:MTH00054   82 TLAFIAWGVIPYgeGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 162 MGYSLFNFYFYQVYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSML 241
Cdd:MTH00054  162 GSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTF 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1935448371 242 FSVIFLGGDIY----------SLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMFFIGL 304
Cdd:MTH00054  242 GVILFLGGWLVisgptsyfsnFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGI 314
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 3-304 1.35e-67

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 214.88  E-value: 1.35e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   3 YLISFIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFS 82
Cdd:MTH00029    6 YITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIIS 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  83 LFLSLLVWMCIPL--FVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFL 160
Cdd:MTH00029   86 FTLAILAWAIVTMdqGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILC 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 161 IMGYSLFNFYFYQVYLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSM 240
Cdd:MTH00029  166 VGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSC 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 241 LFSVIFLGGDI-----------------------YSLFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNY 297
Cdd:MTH00029  246 MMTIFFLGGWLspldgiptppeafsifeqiasskSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGL 325


                  ....*..
gi 1935448371 298 IMFFIGL 304
Cdd:MTH00029  326 VILTAGI 332
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-306 3.24e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 203.98  E-value: 3.24e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  11 LLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSLFLSLLVW 90
Cdd:MTH00090    3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  91 MCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLIMGYSLFNFY 170
Cdd:MTH00090   83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVSSF 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 171 fyqvYLWFLFIGFPlalvWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFSVIFLGgd 250
Cdd:MTH00090  163 ----SLSLFVIYLP----FLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK-- 232

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1935448371 251 iyslFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMFFIGLSV 306
Cdd:MTH00090  233 ----FSFLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 7-302 2.30e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 165.87  E-value: 2.30e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   7 FIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYpllsnyiSYYFSPIFSLFLS 86
Cdd:MTH00058    4 LVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVY-------GFQSRSWFSLFGV 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  87 LLVWMCIPLFVKLFSF-------NLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVF 159
Cdd:MTH00058   77 FLLVLLVVFYCFIYGSyysgsysSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGL 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 160 LIMGYSLFNFYFYQVYLWFLFigFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMS 239
Cdd:MTH00058  157 CYGSYSLVDFYYSGWLSVLLF--PLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFS 234

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1935448371 240 MLFSVIFLGGDIYSLFfylkLVFISFLFIWARGTLPRFRYDKLMYLAWKCFLPFSLNYIMFFI 302
Cdd:MTH00058  235 WLGSVLFFGGGFVSIM----LLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
 11-295 7.94e-38

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 137.78  E-value: 7.94e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  11 LLLIICIMVGVAFLTLLERSVLGYIQIRKGPNKVGFVGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSP---IFSLFLSL 87
Cdd:CHL00032   34 LTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPsiaVISILLSY 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  88 LVwmcIPLFVKLF--SFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLIMGYS 165
Cdd:CHL00032  114 LV---IPFGYHLVlaDLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLS 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 166 LFN-------FYFYQVYLWFLFIGFplaLVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFM 238
Cdd:CHL00032  191 TVDiveaqskYGFWGWNLWRQPIGF---IVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVS 267

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 239 SMLFSVIFLGGDIYSL--FFYLKL---------------VFIS------FLF--IWARGTLPRFRYDKLMYLAWKCFLPF 293
Cdd:CHL00032  268 SLFVTVLYLGGWNLSIpyIFIPELfeinktggvfgttigIFITlaktylFLFisITTRWTLPRLRMDQLLNLGWKFLLPI 347


                  ..
gi 1935448371 294 SL 295
Cdd:CHL00032  348 SL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
4-291 9.87e-26

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 103.72  E-value: 9.87e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371   4 LISFIGSLLLIICIMVGVAFLTLLERSVLGYIQIRKGPnkvgfvGIPQPFCDAIKLFTKEQTYPLLSNYIsYYFSPIFSL 83
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371  84 FLSLLVWMCIPLFVK--LFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSLALVLLSFVFLI 161
Cdd:COG0650    74 AAMLLAALLVPVLTTgpPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448371 162 MGYSLFNFYFYQV---YLWFLFIGFPLALVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFM 238
Cdd:COG0650   154 GSTSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1935448371 239 SMLFSVIFLGGDIYS------LFFYLKLVFISFLFIWARGTLPRFRYDKLMYLAWKCFL 291
Cdd:COG0650   234 LSLFVNLFLPWGIALtlllalLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFL 292
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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