|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
8.77e-155 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 438.10 E-value: 8.77e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 1 MNPYANTIITTSLIMGPLLTISSNHWILAWTGLEISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWT 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 81 LGQWSITQMSNNISCTILTTALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTAQSMNTPLMLTLGLT 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 161 STIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLTLLTFYTYIAMTSTMFLMIKLLETNKISVMMTSWTKLPTL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 241 NTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLSLFFYLRISYYTTITLPPNSTNYLQQWRHKIN 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 1935445371 321 QKHYLALMTTLSISLLPITPTLLTAI 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
9.61e-140 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 399.95 E-value: 9.61e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 1 MNPYANTIITTSLIMGPLLTISSNHWILAWTGLEISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWT 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 81 LGQWSITQMSNNISCTILTTALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTAQSmNTPLMLTLGLT 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 161 STIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLTLLTFYTYIAMTSTMFLMIKLLETNKISVMMTSWTKLPTL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 241 NTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLSLFFYLRISYYTTITLPPNSTNYLQQWRHKIN 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*
gi 1935445371 321 QKHY-LALMTTLSISLLPITPTLLT 344
Cdd:MTH00135 320 QLTLpLAISTTATLMLLPLTPAILA 344
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
6.66e-135 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 387.74 E-value: 6.66e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 1 MNPYANTIITTSLIMGPLLTISSNHWILAWTGLEISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWT 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 81 LGQWSITQMSNNISCTILTTALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTAQSMNTPLMLTLGLT 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 161 STIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLTLLTFYTYIAMTSTMFLMIKLLETNKISVMMTSWTKLPTL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 241 NTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLSLFFYLRISYYTTITLPPNSTNYLQQWRHKIN 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....
gi 1935445371 321 QKHYLALMTTLSISLLPITPTLLT 344
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILN 344
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
9.98e-118 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 344.14 E-value: 9.98e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 1 MNPYANTIITTSLIMGPLLTISSNHWILAWTGLEISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWT 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 81 LGQWSITQMSNNISCTILTTALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTAQSMNTPLMLTLGLT 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 161 STIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLTLLTFYTYIAMTSTMFLMIKLLETNKISVMMTSWTKLPTL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 241 NTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLSLFFYLRISYYTTITLPPNSTNYLQQWRHK-I 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFEnT 320
|
330 340
....*....|....*....|....*
gi 1935445371 320 NQKHYLALMTTLSISLLPITPTLLT 344
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSI 345
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
2.01e-99 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 297.27 E-value: 2.01e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 1 MNPYANTIITTSLIMGPLLTISSNHWILAWTGLEISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWT 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 81 LGQWSITQMSNNISCTILTTALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTAQSMNTPLMLTLGLT 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 161 STIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLTLLTFYTYIAMTSTMFLMIKLLETNKISVMMTSWTKLPTL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 241 NTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLSLFFYLRISYYTTITLPPNSTNYLQQWRHKIN 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....
gi 1935445371 321 QKHYLALMTTLSISLLPITPTLLT 344
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLF 344
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-336 |
7.87e-83 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 255.24 E-value: 7.87e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 1 MNPYANTIITTSLIMGPLLTISSNHWILAWTGLEISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWT 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 81 LGQWSITQMSNNISCTILTTALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTAQSMNTPLMLTLGLT 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 161 STIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLTLLTFYTYIAMTSTMFLMIKLLETNKISVMMTSWTKLPTL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 241 NTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLSLFFYLRISYYTTITLPPNSTNYLQQWRHKIN 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330
....*....|....*.
gi 1935445371 321 QKHYLALMTTLSISLL 336
Cdd:MTH00041 321 ITVYGVILSILSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
1.98e-56 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 186.57 E-value: 1.98e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 1 MNPYANTIITTSLIMGPLLTISSNHWILAWTGLEISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAwt 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNM-- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 81 lgqwSITQMSNNISCTILTTALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTaqsMNTPLMLTLGLT 160
Cdd:MTH00160 80 ----LNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 161 STIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLTLLTFYTYIAMTSTMFLMIKLLETNKISVMMTSWTKLPTL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 241 NTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLSLFFYLRISYYTTITLPPNSTNYLQQwrHKIN 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKK--KKNK 310
|
330 340
....*....|....*....|...
gi 1935445371 321 QKHYLALMTTLSISLLPITPTLL 343
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLLF 333
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-278 |
2.86e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 173.15 E-value: 2.86e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 13 LIMGPLLTISSNHWILAWTGLEISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWsitqmsnn 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW-------- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 93 ISCTILTTALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTAQSMNTPLML-TLGLTSTIIGGWNGLN 171
Cdd:MTH00144 85 FSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLcVISVLSALVGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 172 QTQLRKIMAFSSIAHLGWMITILTLSPKLTLLTFYTYIamTSTMFLMIKLLETNKISVMMTSWTKLPTLNTM-MMLTLMS 250
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYI--VSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGLsIISLLLS 242
|
250 260
....*....|....*....|....*...
gi 1935445371 251 LAGLPPLTGFMPKWLIIQELTKQHMLII 278
Cdd:MTH00144 243 LGGLPPFLGFCSKLLVLISSMESSPLLL 270
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
11-278 |
4.24e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 162.26 E-value: 4.24e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 11 TSLIMGPLLTISSNHWILAWTGLEISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIInawtlgQWSITQMS 90
Cdd:MTH00011 13 STMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSFPSLL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 91 NNISCTILTTALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTAQSMNTPLMLTLGLTSTIIGGWNGL 170
Cdd:MTH00011 87 KNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGM 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 171 NQTQLRKIMAFSSIAHLGWMITILTLSPKLTLLTFYTYIAMTSTMFLMIKLLETNKISVMMTSWTKLPTLNTMMMLTLMS 250
Cdd:MTH00011 167 NQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLS 246
|
250 260
....*....|....*....|....*...
gi 1935445371 251 LAGLPPLTGFMPKWLIIQELTKQHMLII 278
Cdd:MTH00011 247 LGGLPPFTGFMPKLMAIETLTSNSMILI 274
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
12-282 |
4.26e-37 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 135.57 E-value: 4.26e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 12 SLIMGPLLTISSNHWILAWTGLEISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSItqmsn 91
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLL----- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 92 niSCTILTTALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTAQSMNtpLMLTLGLTSTIIGGWNGLN 171
Cdd:MTH00197 81 --SVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFM--GLLICSVLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 172 QTQLRKIMAFSSIAHLGWMITILTLSPKLTLLTFYTYIAMTSTMFLMIKLLETNKISVMMTSWTKLPTLNTMMMLTLMSL 251
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSL 236
|
250 260 270
....*....|....*....|....*....|.
gi 1935445371 252 AGLPPLTGFMPKWLIIQELTKQHMLIIATMM 282
Cdd:MTH00197 237 GGLPPLSGFFLKWLILTSLLSSNISLITFML 267
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
1.48e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 110.89 E-value: 1.48e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 13 LIMGPLLTISSNHWILAWTGLEISTLAVIPLIA-KQHHPRAIEAAIKYFLTQATASTLILFS-------------SIINA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIAqNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 79 WTLGQWSITQMSNNISCTILTTALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTAQSMNtpLMLTLG 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 159 LTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTL----SPKLTLLTFYTYIAMTSTMFLMIKLLETNKISVMMTS- 233
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIgsfeSIQASLVYLFIYIIMSICVFSIILALNVYKNLIIEFSg 239
|
250 260 270
....*....|....*....|....*....|....*
gi 1935445371 234 -WTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLII 267
Cdd:MTH00196 240 lSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-280 |
4.01e-27 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 108.17 E-value: 4.01e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 23 SNHWILAWTGLEISTLAVIPLIA-KQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSITQMSNNISCTI---- 97
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 98 -------LTTALAIKLGLAPFHFWLPEVLQGT-TTTTALILTTWQKLAPL-----SLLMMTAQSMNTPLMLTLGLTSTII 164
Cdd:pfam00361 81 llllfllILVGFLFKSAQVPFHTWLPDAYEGApTPVSALLAATLVKAGGYglirrSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 165 GGWNGLNQTQLRKIMAFSSIAHLGWMITILTL----SPKLTLLTFYTYIAMTSTMFLMIKLLE-----TNKISVMMTSWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAgtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIyrrvhTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1935445371 236 KLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIAT 280
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVL 285
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-283 |
4.82e-26 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 107.89 E-value: 4.82e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 14 IMGPLLTISSNHWILAWTGLEISTLAVIPLIA-KQHHPRAIEAAIKYFLTQATASTLILF-SSIINAWTlGQWSITQMSN 91
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYGAT-GSLNLAGIAA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 92 NIS------------CTILTTALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLM-------MTAQSMNTP 152
Cdd:COG1007 191 ALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLrllveafPGLAADWQL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 153 LMLTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWM-ITILTLSPK-LTLLTFY--TYIAMTSTMFLMIKLLET-NKI 227
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLlLGLAAGTPLgVSAALFYllAYLFMNLGAFAVILLLSRkGGE 350
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 228 SVMMTSWTKL----PTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMA 283
Cdd:COG1007 351 AEEIEDLAGLarrsPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAV 410
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-279 |
7.35e-24 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 101.82 E-value: 7.35e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 14 IMGPLLTISSNHWILAWTGLEISTLAVIPLIA-KQHHPRAIEAAIKYFLTQATASTLILF-SSIINAWTlGQWSITQMSN 91
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYgMSLLYGAT-GSLSFAGIAK 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 92 NISCTI------------LTTALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLM-------MTAQSMNTP 152
Cdd:PRK05777 192 ALADGSgnsllllfglvfLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLrllvvafGGLSEDWQQ 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 153 LMLTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLTL--LTFY--TYIAMTSTMFLMIKLLETNKIS 228
Cdd:PRK05777 272 VLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYllAYLFMTLGAFGVISLLRRKGGE 351
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1935445371 229 V-MMTSWTKL----PTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIA 279
Cdd:PRK05777 352 AeSISDFAGLskrsPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLA 407
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
3.06e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 100.09 E-value: 3.06e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 13 LIMGPLLTISSNHWILAWTGLEISTLAVIPLIA-KQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 88 QMSNNISCTILTTALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTAQSMNtpLMLTLGLTSTIIGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICAVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 168 NGLNQTQLRKIMAFSSIAHLGWMITILTL----SPKLTLLTFYTYIAMTSTMFLMIKLLETNKISVMMTSWT--KLPTLN 241
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFILFGVAIgsfeSIQASLIYMIIYVIMSICSFSIILSLKLTKGLIVEVSGLsrKNPVIA 343
|
250 260
....*....|....*....|....*.
gi 1935445371 242 TMMMLTLMSLAGLPPLTGFMPKWLII 267
Cdd:MTH00199 344 LTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-283 |
4.55e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 96.37 E-value: 4.55e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 13 LIMGPLLTISSNHWILAWTGLEISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSITQMSNN 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 93 IS----------CTILTTALAIKLGLAPFHFWLPE-----------VLQGTTTttalilttwqKLAPLSLLMM------- 144
Cdd:COG0651 196 LAeldpglllaaFALLLVGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLT----------KVGVYAILRVltllfga 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 145 TAQSMNTPLMLTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLTLLTFYTYIA----MTSTMFL--- 217
Cdd:COG0651 266 DPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLnhalAKALLFLaag 345
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1935445371 218 -MIKLLETNKISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMA 283
Cdd:COG0651 346 aIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLL 412
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-282 |
1.71e-21 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 95.01 E-value: 1.71e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 14 IMGPLLTISSNHWILAWTGLEISTLAVIPLIA-KQHHPRAIEAAIKYFLTQATASTLILF-SSIINAWT-------LGQW 84
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFgISLIYGFTgslnfedLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 85 SITQMSNNISCTI----LTTALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLM-------MTAQSMNTPL 153
Cdd:TIGR01770 192 LSNGMLNISLLLLgivlILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 154 MLTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLTL--LTFY--TYIAMTSTMFLMIKLLETNK--- 226
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYifIYALMSLGAFGVLSLLRSYKdew 351
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1935445371 227 ---ISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMM 282
Cdd:TIGR01770 352 ieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIA 410
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-267 |
1.12e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 77.98 E-value: 1.12e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 15 MGPLLTISSNHWILAWTGLEISTLAVIPLIAKQHHPRAI---------EAAIKYFLTQATASTLILFS------------ 73
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGcalyfgftgneg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 74 ---SIINAwTLGQWSITQMSNNISCTILTTALAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLmmTAQSMN 150
Cdd:MTH00198 279 mlgTILSA-TLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILL--TSLVIT 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 151 TPLMLTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLTLLTFYTYIA--MTSTM--FLMIKLLE--- 223
Cdd:MTH00198 356 SKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVtyLVSALasFTVICTLEefg 435
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1935445371 224 --------------TNKISVMMTSWTKL----PTLNTMMMLTLMSLAGLPPLTGFMPKWLII 267
Cdd:MTH00198 436 trtptsrqrdgsfgNYNLVRRLVDLTILsrgqPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
4-268 |
1.18e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 68.43 E-value: 1.18e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 4 YANTIITTSLIMGPLLTISSNHWILAWtglEISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAW-TLG 82
Cdd:TIGR01972 109 YALLLLLEAGVIGVFLALDLFLFYVFW---EAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGLYFlGGG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 83 QWSITQMSNNISCTILTT--------ALAIKLGLAPFHFWLPEV-LQGTTTTTALILTTWQKLAPLSL------LMMTAQ 147
Cdd:TIGR01972 186 TFDLLELLNLPLPFGVQTwlflaffiAFAVKVPLFPLHTWLPDAhVEAPTAGSVILAGVLLKMGTYGFlrfnlpLFPDAS 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 148 SMNTPLMLTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGW-MITILTLSPKLTLLTFYTYIA---MTSTMFLMIKLLE 223
Cdd:TIGR01972 266 LYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLGIFSFNELGISGAVFQMIShglITAALFLLVGVLY 345
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1935445371 224 ----TNKISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQ 268
Cdd:TIGR01972 346 erahTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILL 394
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-267 |
3.51e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 67.03 E-value: 3.51e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 38 LAVIP---LIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWS---ITQMSNNISCTI-------LTTALAI 104
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTfdiAELAAAPLPLTAqlllflaFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 105 KLGLAPFHFWLPE-----------VLQGTTTttalilttwqKLAP-----LSLLMMTAQSMN-TPLMLTLGLTSTIIGGW 167
Cdd:COG1008 222 KVPMFPFHTWLPDahveaptagsvLLAGVLL----------KMGGygllrFALPLFPEASAYfAPLLAALGVIGIIYGAL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 168 NGLNQTQLRKIMAFSSIAHLGWM-ITILTLSPKLTLLTFYTYIA---MTSTMFLMIKLLE----TNKISVMMTSWTKLPT 239
Cdd:COG1008 292 VALAQTDLKRLIAYSSVSHMGFVlLGIFALNPLGLQGAVLQMVShglITAALFLLVGVLYdrthTRDIADLGGLAKRMPV 371
|
250 260
....*....|....*....|....*...
gi 1935445371 240 LNTMMMLTLMSLAGLPPLTGFMPKWLII 267
Cdd:COG1008 372 LAALFLLAALASLGLPGTSGFVGEFLVL 399
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-282 |
4.00e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 66.94 E-value: 4.00e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 34 EISTLAVIPLIAKQHHpRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSITQMSNN-ISCTILTTALAI-------- 104
Cdd:PRK08668 128 EIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGlINDTSTGFALIVflfllafg 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 105 --KLGLAPFHFWLPE-----------VLQGTTT-------TTALILTTWQKLAPLSLLMMTAQSMNTPLMLtLGLTSTII 164
Cdd:PRK08668 207 vaKAGIFPLHVWAPDayseapqsfsaVLSGQLSklgaygfLLVLYVLPGTKLFSEFGTYRGVPLFNYILAW-LGNISIIV 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 165 GGWNGLNQTQLRKIMAFSSIAHLGW-MITILTLSPKLTLLTFYTYI--AMTSTMFLM-----IKLLETNKISVMMTSWTK 236
Cdd:PRK08668 286 GTLMAILQEDIKKLIAYSSVANGGYiLVGLGLGTSLGFAGGLFHVFnhALFKGLFFLifaavIYRTGTTKISEMGGLIEK 365
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1935445371 237 LPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMM 282
Cdd:PRK08668 366 MPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMA 411
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
6.76e-11 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 63.10 E-value: 6.76e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 51 RAIEAAIKYFLTQATASTLIL--FSSI--INAWTLGQWSI------TQMSNNISCTI----LTTALAIKLGLAPFHFWLP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWLygLSGGEIELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 117 EVLQGTTTTTALILTTWQKLAPLSL------LMMTAQSMNTPLMLT-LGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAASALatrifdIPFYFSSNEWHLLLEiLAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 190 -MITILTLSPKL---TLLTF-YTYIAMTSTMFLMIKLLE----TNKISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGF 260
Cdd:CHL00049 319 vIIGIIVGDSNDgyaSMITYmLFYIFMNLGTFACIVLFGlrtgTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGF 398
|
...
gi 1935445371 261 MPK 263
Cdd:CHL00049 399 FGK 401
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
1.92e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 61.65 E-value: 1.92e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 33 LEISTLAVIPLIAKQHH-PRAIEAAIKYFLTQATASTLILFSSII-----NAWTLGQWSItQMSNN------ISCTILTT 100
Cdd:PRK08376 150 LEIMSIASYALVAFRNDtWEAIEAGIKYMFVGSLASSMVLLGIALlygqyGTLNMAYLAV-KMSENptvvakIALALFIA 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 101 ALAIKLGLAPFHFWLPEVlQGTTTTTALILTTWQKLAPLSLLMMTAQSMNTP---------LMLTLGLTSTIIGGWNGLN 171
Cdd:PRK08376 229 GLAMKSGAVPVHMWLPDA-YPAAPSSISAMLLVIKQAGLYALARVLFSIYGPainlatvgwVIIILGCLTMFVGVAMAVV 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 172 QTQLRKIMAFSSIAHLGWM-----ITILTLSPklTLLTFYTYIAMTSTMF------LMIKLLETNKISVMMTSWT----- 235
Cdd:PRK08376 308 QKDVKRLLAYHSVSQIGYMllglgVGLAALGD--PAMASYGEIALAGGIYhivnhaLYKALLFLTAGAVIYETGTrnlne 385
|
250 260 270
....*....|....*....|....*....|....*..
gi 1935445371 236 ------KLPTLNTMMMLTLMSLAGLPPLTGFMPKWLI 266
Cdd:PRK08376 386 lgglarTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
2.76e-10 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 61.22 E-value: 2.76e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 50 PRAIEAAIKYFLTQATASTLILF-SSIINAWTLGQWSITQMSNNISCT---ILTTAL-------AIKLGLAPFHFWLPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSAIALALITSpslGLALALvfviagiAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 119 LQGTTTTTALILTTWQKLAPLSL---LMMTAQSMNTP----LMLTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGW-M 190
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFvM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 191 ITILTLSPK-LTLLTFY--TYIAMTSTMFLMIKLLE----TNKISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPK 263
Cdd:PRK02504 317 IGLVAGTEAgYASMVFYllAYLFMNLGAFACVILFSlrtgTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
8-263 |
3.55e-09 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 58.13 E-value: 3.55e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 8 IITTSLIMGPLLTISSNHWILAWTGLEISTLAVIPLIAKQHhPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSIT 87
Cdd:PRK12650 114 LLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLS 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 88 QM------SNNiscTILTTALAIKLGLA--------PFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTAQSM-NTP 152
Cdd:PRK12650 193 GIlhsdvwAEK---PGLTTVVAVLIAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhDVA 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 153 ----LMLTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMI-TILTLSP-KLTLLTFYT--YIAMTSTMFLMIKLLE- 223
Cdd:PRK12650 270 vwnwLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVaTIGVGTPfALTAAVVHTlaHALFKSSLFMLIGVVDh 349
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1935445371 224 ---TNKISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPK 263
Cdd:PRK12650 350 qagTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
18-279 |
5.65e-09 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 57.25 E-value: 5.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 18 LLTISSNHWILAWTGLEISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSII---NAWTL-------GQWS-I 86
Cdd:PRK06458 122 LLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTILvyaNAATVmgdgemaILWTeL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 87 TQMSNNISCTILTTALAI-------KLGLAPFHFWLPE-----------VLQGTttttalilttwqkLAPLSLL------ 142
Cdd:PRK06458 202 LKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGV-------------LLNVALYavlryy 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 143 MMTAQSMNT----PLMLTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLTllTFYTYIAMT------ 212
Cdd:PRK06458 269 ILIDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLG--IFAALLHMLnhsltk 346
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1935445371 213 STMFL----MIKLLETNKISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIA 279
Cdd:PRK06458 347 SAIFFasgnVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIA 417
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
18-270 |
5.01e-08 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 54.39 E-value: 5.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 18 LLTISSNHWILAWTGLEISTLAVIPLIA-KQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSITQMSNNIScT 96
Cdd:COG1009 125 LGLVLSDNLLLLFVFWELVGLCSYLLIGfWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAP-T 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 97 ILTTALAIKLGLA------------PFHFWLPE-----------------VLQGTTTTTalilttwqKLAPLSLLMMTAQ 147
Cdd:COG1009 204 ILSSPLLTLILLLlllgafgksaqfPLHFWLPDamegptpvsallhaatmVKAGVYLLA--------RLSPLFALSPVWL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 148 SmntpLMLTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSpkltlltfyTYIA-----MT-----STMFL 217
Cdd:COG1009 276 T----VVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---------AYVAalfhlLThaffkALLFL 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1935445371 218 M----IKLLETNKISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQEL 270
Cdd:COG1009 343 GagsvIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAA 399
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-282 |
5.90e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 54.21 E-value: 5.90e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 33 LEISTLAVIPLIA-KQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLG------------QWSITQMSNNISCTILT 99
Cdd:PRK12667 142 LEVLSISAYGLVAyYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGtlnmadlsakirGLSFPLTGGLAGNPPLA 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 100 TALA---------IKLGLAPFHFWLPEV-----------LQGTTTTT--ALILTTWQKLAPLSLLMMTAQSMNTPLMLTL 157
Cdd:PRK12667 222 LGVAlalalwaftIKAAIFPNHFWLPDAhpaapspvsamLSGLVVNVgaYAIIRFLYTIFGISPSLIDFRAALSPILIIL 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 158 GLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLTLLTFYTYIA----------MTSTMFlmIKLLETNKI 227
Cdd:PRK12667 302 GAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaiaksllfLASGVF--IHAAGTRDI 379
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1935445371 228 SVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMM 282
Cdd:PRK12667 380 DELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL 434
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-268 |
3.72e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 51.51 E-value: 3.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 97 ILTTALAIKLGLAPFHFWLPE-----------VLQGTTTttalilttwqKLAPLSL-----LMMTAQSMNTPLMLtLGLT 160
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPDsyptapapvtaVFAGLLT----------KVGVYAIirthtLLFPGGGLDTLLMV-VALL 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 161 STIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLTL--LTFYT--YIAMTSTMFLMIKLLETNKISVMMTSWTK 236
Cdd:PRK12665 283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLsgAIYYVahHITVQTTLFLVVGLIERQAGSSSLRRLGG 362
|
170 180 190
....*....|....*....|....*....|....*.
gi 1935445371 237 L----PTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQ 268
Cdd:PRK12665 363 LakasPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-299 |
4.25e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 51.42 E-value: 4.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 33 LEISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSITQMSNNISCT--------ILTTALAI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENptvvtafgFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 105 KLGLAPFHFWLPE-----------VLQGTTTTTALILttwqkLAPLSLLMMTAQSMNTPLMLTLGLT----STIIGGWNG 169
Cdd:PRK08375 215 KAAVFPLHTWLPRaypaappvvtaLLSGLVTKVAVYA-----LIRIYFTVFGGDFRFALGLGWLLAVlallSMLVGSLAA 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 170 LNQTQLRKIMAFSSIAHLGWMITILTLSPKLTLLTFYTYIA----MTSTMFLMIKLLETNKISVMMTSWTKL----PTLN 241
Cdd:PRK08375 290 LGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLhhalMKGALFLAAGAIEVTYGTRRLSELSGLgrrmPLTA 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1935445371 242 TMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMMALLSLLSLFFYLRISYY 299
Cdd:PRK08375 370 AAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-266 |
5.28e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 51.24 E-value: 5.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 38 LAVIPL---IAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSI---TQMSNNISCTI-------LTTALAI 104
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFdyePLRSHTLPLSTqllllapILVGFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 105 KLGLAPFHFWLPEV-LQGTTTTTALILTTWQKLAPLSLL------MMTAQSMNTPLMLTLGLTSTIIGGWNGLNQTQLRK 177
Cdd:PRK06473 218 KIPLVPFHTWLPDAhVEASTPVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKK 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 178 IMAFSSIAHLGWMITILTLSPKLTLL-TFYTYIA---MTSTMFLMIKLL-------ETNKISVMMTSWTKLPTLNTMMML 246
Cdd:PRK06473 298 MVAYSSIGHMGYILLAAAAATPLSILaAVFQMIShglISALLFLLVGVVykktgsrDVDVLRGLLNPERGLPITGSLMIL 377
|
250 260
....*....|....*....|
gi 1935445371 247 TLMSLAGLPPLTGFMPKWLI 266
Cdd:PRK06473 378 GVMASAGIPGMVGFIAEFLV 397
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
13-281 |
5.93e-07 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 51.39 E-value: 5.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 13 LIMGPLL-TISSNHWILAWTGLEISTLAVIPLIAKQHH-PRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSITQM- 89
Cdd:TIGR00940 114 AFMGAMLgVVLSDNLILLYVFWELTSIVSFLLISYWHHrAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVi 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 90 ---SNNISCTILTTALAIKLGLA-------PFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLM-MTAQSMNTP----LM 154
Cdd:TIGR00940 194 asaDAIRNSPLFGTAMVLVLLGAftksaqfPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLArFTPVFAGTEawfwIV 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 155 LTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTL-SPKLTLLTFYTYIAMTSTMFLMIKLLE--TNKISVMM 231
Cdd:TIGR00940 274 GLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLgSPSYHYQGDDSKIYALAAVAAVFHLINhaTFKGSLFM 353
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1935445371 232 TS------------------WTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATM 281
Cdd:TIGR00940 354 AAgiidhetgtrdirklgglFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAHLVNPFDT 421
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
97-263 |
1.23e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 50.31 E-value: 1.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 97 ILTTALAiKLGLAPFHFWLPEVLQGTTtttalilttwqklaPLS--------------LLMMTAQSMNT-----PLMLTL 157
Cdd:PRK12644 209 ILVGALS-KSAIVPFHFWLPGAMAAPT--------------PVSaylhaaamvkagiyLVARLAPGFADvpvwrPTVLVL 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 158 GLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLTLLtfyTYIAMT-------STMFLMIKLLE----TNK 226
Cdd:PRK12644 274 GLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAAL---AGLAMLlahalfkAALFLVVGIIDhstgTRD 350
|
170 180 190
....*....|....*....|....*....|....*..
gi 1935445371 227 ISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPK 263
Cdd:PRK12644 351 IRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
6.36e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 47.64 E-value: 6.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 33 LEISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSIT--QMSNNISCTILTTALAIKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSglATADPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 111 FHFWLPE-----------VLQGTTTttalilttwqKLAPLSLLMMTAQSMNTPLMLTL-GLTSTIIGGWNGLNQTQLRKI 178
Cdd:PRK07234 203 SGLWLPLthseaeppvsaLLSGVVV----------KAGVFPLVRCALDVPGLDLIVRIfGVGTALLGVLFALLEKDLKRM 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 179 MAFSSIAHLGWMItiltLSPKLTLLTFYTYIAMTSTMFLMIKLLE----TNKISVMMTSWTKLPtlntmMMLTLMSLAGL 254
Cdd:PRK07234 273 LAFSTISQLGFIL----AAPLVGGLYALAHGLVKSTLFLCAGALPsrnfTELISQMLGIGKWIP-----LTMASFSIAGF 343
|
250
....*....|....*..
gi 1935445371 255 PPLTGFMPKWLIIQELT 271
Cdd:PRK07234 344 PLLAGFVSKVLTLKNLL 360
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
19-192 |
7.27e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 47.44 E-value: 7.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 19 LTISSNHWILAWTGLEISTLAVIPLIAKQHHPRAIEAAIKYFLTQATA------STLILFSSIINAWTLGQWSITQMSNN 92
Cdd:PRK08676 117 FAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNWTELAAH 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 93 ----------ISCTILTTALAIKLGLAPFHFWLPEV-LQGTTTTTALILTTWQKLAPLSLLMMTAQSMNT-------PLM 154
Cdd:PRK08676 197 asllspsvlgASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSgaaeqfsNVL 276
|
170 180 190
....*....|....*....|....*....|....*...
gi 1935445371 155 LTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMIT 192
Cdd:PRK08676 277 IGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLL 314
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
1.27e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 46.84 E-value: 1.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 101 ALAIKLGLAPFHFWLPEV-LQGTTTTTALILTTWQKLAPLSLLMMT-------AQSMnTPLMLTLGLTSTIIGGWNGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSwpilplgAQNL-APAVIAMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 173 TQLRKIMAFSSIAHLGwMITILTLSPKLTLLTFYTYIAM-----TSTMFLMIKLL----ETNKISVMMTSWTKLPTLNTM 243
Cdd:MTH00226 318 IDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIMLahgivSSLLFILVTILydrhHTRLIKYYRGLSITMPIWGTI 396
|
170 180
....*....|....*....|....
gi 1935445371 244 MMLTLMSLAGLPPLTGFMPKWLII 267
Cdd:MTH00226 397 MIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
34-267 |
1.38e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 46.73 E-value: 1.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 34 EISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSI----INAWTLGQWSITQ-MSNNISCTILT-------TA 101
Cdd:PRK05846 141 EAMLIPMYFLIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADlLNLPLPPGVQYwlflaffIA 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 102 LAIKLGLAPFHFWLPEV-LQGTTTTTALILTTWQKLAP-----LSLLMMTAQSMN-TPLMLTLGLTSTIIGGWNGLNQTQ 174
Cdd:PRK05846 221 FAVKMPMFPLHTWLPDAhVQAPTAGSVLLAGILLKMGAygllrFSLPLFPDASHEfAPIIITLGVIAIIYGALVALAQTD 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 175 LRKIMAFSSIAHLGW-MITILTLSPK-LTLLTFYTyIA---MTSTMFLMIKLLE----TNKISVMMTSWTKLPTLNTMMM 245
Cdd:PRK05846 301 IKKLIAYSSISHMGFvTLGIFAGNQLgIQGAIFQM-IShglSSAALFLLVGVLYdrlhTRDIADYGGLAKVMPVLAAFFL 379
|
250 260
....*....|....*....|..
gi 1935445371 246 LTLMSLAGLPPLTGFMPKWLII 267
Cdd:PRK05846 380 FFAMASLGLPGTSGFVGEFLIL 401
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
1.70e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 46.24 E-value: 1.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 55 AAIKYFLTQATASTLILFSSIINAWTLGQWS------ITQMSNNISCTILTTAL----AIKLGLAPFHFWLPEV-LQGTT 123
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQNLSLNTQLILLTGLllgfGIKIPLVPLHTWLPDAyTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 124 TTTALILTTWQKLAPLSLLMMTAQ------SMNTPLMLTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLS 197
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLRFGLQlfpqtwSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 198 PKLTLL----TFYTYIAMTSTMFLMIKLLET-------NKISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLI 266
Cdd:PRK07363 318 TQLSLLgavaQMISHGLILALLFHLVGIVERkvgtrdlDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIV 397
|
..
gi 1935445371 267 IQ 268
Cdd:PRK07363 398 FQ 399
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
154-274 |
3.43e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 45.50 E-value: 3.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 154 MLTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLTLLTFYTYIA----MTSTMFLMIKLLE----TN 225
Cdd:PRK12662 282 FMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnhsiVKSALFMVSGSISyhfgTT 361
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1935445371 226 KISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQH 274
Cdd:PRK12662 362 KLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSN 410
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-266 |
3.98e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 45.30 E-value: 3.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 110 PFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTAQSM-NTPLMLTL----GLTSTIIGGWNGLNQTQLRKIMAFSSI 184
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLgGTPLWQTIlplfGGLTMLTGALLAVRQTDLKLILAYSTV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 185 AHLGWMITILTLSPKLTLLTFYTYIAMTS----TMFLMIKLLE----TNKISVMMTSWTKLPTLNTMMMLTLMSLAGLPP 256
Cdd:PRK12647 293 SALGTLVMLLGLGSELAIKAAVLFLVAHSlykgALFMVAGIIDhetgTRDITKLGGLRRAMPITAAAALLAALSMAGLPP 372
|
170
....*....|
gi 1935445371 257 LTGFMPKWLI 266
Cdd:PRK12647 373 LFGFLAKELI 382
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-270 |
1.69e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 43.57 E-value: 1.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 55 AAIKYF-LTQAtaSTLILFSSII------NAWTLGQWSITQMSNNISCTILTTALAIKLGLAPFHFWLPEVLQGTTTTTA 127
Cdd:PRK08667 163 AGIFYFvMTQL--STVFLMLGIIvlfiqtGSFELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVS 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 128 LILTTWQKLAPLSLLMMTAQSMNTP------LMLTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLG--------WMITI 193
Cdd:PRK08667 241 ALMSGVMLKVAVYGLVRFLMDVLSPelwwgvLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFG 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 194 LTLSPKLTLLTF-------YTYIAMTSTMFL----MIKLLETNKISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMP 262
Cdd:PRK08667 321 VYGLDTLALLALggalfhsLNHALFKSLLFLtagsVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFAS 400
|
....*...
gi 1935445371 263 KWLIIQEL 270
Cdd:PRK08667 401 ELLLYESF 408
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
78-282 |
2.15e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 42.83 E-value: 2.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 78 AWTLGQ--WSITQM-----SNNISCTILTTALAiKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLM-----MT 145
Cdd:MTH00207 159 GWTLNQghWSITNMwqtdmNNYIALSIMIAAMT-KSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIrfypfLS 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 146 AQSMNTPLMLTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLS-PKLTLLTFYTYIAMTSTMFL----MIK 220
Cdd:MTH00207 238 STYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFVcagsLIH 317
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1935445371 221 L-LETNKISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMM 282
Cdd:MTH00207 318 ShHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILM 380
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-272 |
2.42e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 42.82 E-value: 2.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 110 PFHFWLPEVLQGTTTTTALILTTWQKLAPLSLL-----MMTAQSMNTPLMLTLGLTSTIIGGWNGLNQTQLRKIMAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLfrftpLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 185 AHLGWMITILTL------SPKLTLLTFYTYIAMTSTMFLMIKLL----------------ETNKISVMMTSWTKLPTLNT 242
Cdd:PRK12646 308 SQLGMIMAMVGIgggyaqHQQDAIASIYVFVLFAALFHLMNHAIfkcalfmgvgiidheaGTRDIRILSGMRQLFPKMNL 387
|
170 180 190
....*....|....*....|....*....|
gi 1935445371 243 MMMLTLMSLAGLPPLTGFMPKWLIIQELTK 272
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
137-268 |
4.22e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 42.25 E-value: 4.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 137 APLSLLMMTaqsmntplmlTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTL--SPKLTLLTFYTYIAMTST 214
Cdd:MTH00032 285 APLTLLIIT----------IFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKAL 354
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 215 MFL----MIKLLETNK--ISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQ 268
Cdd:MTH00032 355 LFLsagsVIHSTTVDEqdMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
111-279 |
6.32e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 41.60 E-value: 6.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 111 FHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTAQSMN-TPLML----TLGLTSTIIGGWNGLNQTQLRKIMAFSSIA 185
Cdd:MTH00020 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEqAPLALiivtIVGSLTVFFAATVGLVQNDLKKVIAYSTCS 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 186 HLGWMITILTLSPKLTLL------TFYTYIAMTSTMFLMIKLLETNKISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTG 259
Cdd:MTH00020 309 QLGYMVVACGLSHYSISLfhlmnhAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTG 388
|
170 180
....*....|....*....|
gi 1935445371 260 FMPKWLIIQELTKQHMLIIA 279
Cdd:MTH00020 389 FYSKDLILELAFGQYYLIFA 408
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
101-255 |
7.98e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 41.19 E-value: 7.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 101 ALAIKLGLAPFHFWLPEV-LQGTTTTTALILTTWQKLAPLSL------LMMTAQSMNTPLMLTLGLTSTIIGGWNGLNQT 173
Cdd:MTH00217 215 SLAIKIPKIPFHIWLPQAhVEAPVAGSVILAGVLLKLGGYGFirfswpLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQV 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 174 QLRKIMAFSSIAHLGwMITILTLSPKLTLLTFYTYIAM-----TSTMFLMIKLL----ETNKISVMMTSWTKLPTLNTMM 244
Cdd:MTH00217 295 DLKRIIAYSSVAHMG-LVTLGIFSHTIQGLVAAIFLMLahglvSSALFIAVTFLyerhHTRLIKYYRGMVITMPLFGILM 373
|
170
....*....|.
gi 1935445371 245 MLTLMSLAGLP 255
Cdd:MTH00217 374 LLLVLANASIP 384
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
139-268 |
1.08e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 40.70 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 139 LSLLMMTAQSMNTPLMLTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLTLLTFYTYIA----MTST 214
Cdd:PRK07691 263 FTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIhdmiVKAA 342
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1935445371 215 MFL----MIKLLETNKISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQ 268
Cdd:PRK07691 343 LFLligiMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-282 |
1.15e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 40.79 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 34 EISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWSITQMSNNI-----SCTILTTALAIKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALlvnptSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 109 A------PFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTAQSMNTP--------LMLTLGLTSTIIGGWNGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIFKLFGGLsyfpsaqgVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 175 LRKIMAFSSIAHLGWMITILTLSPKLT----LLTFYTYIAMTSTMFLMIKLLE----TNKISVMMTSWTKLPTLNTMMML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGivagIFHAINHVIYKSALFLGAGIVSyrtkTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270
....*....|....*....|....*....|....*.
gi 1935445371 247 TLMSLAGLPPLTGFMPKWLIIQELTKQHMLIIATMM 282
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIM 405
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
148-267 |
1.50e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 40.21 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 148 SMNTPLMLTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTL-SPKLTLLTFYTYiAMTST-MFL---MIKLL 222
Cdd:MTH00151 237 SGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLgMPSLALFHLYTH-ALFKAlLFLcagSIIHS 315
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1935445371 223 ETNK--ISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLII 267
Cdd:MTH00151 316 SSGTqdIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLIL 362
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
102-282 |
1.88e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 39.47 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 102 LAIKLGLAPFHFWLPEVLQGTTTTTALILTTWQKLAPLSLLMMTAqSMNTPLMLTLGLTSTIIGGWNGLNqtqLRKIMAF 181
Cdd:MTH00091 67 LMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFF-SKNFFFLLLFGLLICFFQMFLLKS---YKNLLIL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 182 SSIAHLGWMITILTLSpklTLLTFYTYIAMTSTMFLMIklletnkisvmmTSWTKLPTLNTMMMLTLMSLAGLPPLTGFM 261
Cdd:MTH00091 143 SSTESFNWLILSFFFS---FFNVFFLFFYYFLLMLFLI------------PKFNNVNKLNFVSWETLLVFMNLPFSVTFF 207
|
170 180
....*....|....*....|.
gi 1935445371 262 PKWLIIQELTKQHMLIIATMM 282
Cdd:MTH00091 208 VKIFSLSEILKVLGFFLLFLL 228
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
28-188 |
2.02e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 40.01 E-value: 2.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 28 LAWtglEISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAW-----TLGQWSITQMSNNISCTILT--- 99
Cdd:PRK12561 114 LMW---ELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALsgdtfTFDLAELGAKSYPLALELLLyag 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 100 --TALAIKLGLAPFHFWLPE-----------VLQGTTTttalilttwqKLAPLSLLMMTAQSMN------TPLMLTLGLT 160
Cdd:PRK12561 191 flIAFGVKLPIFPLHTWLPDahgeasapvsmILAGVLL----------KMGGYALIRFNVQMLPdahvyfAPALAILGVV 260
|
170 180
....*....|....*....|....*...
gi 1935445371 161 STIIGGWNGLNQTQLRKIMAFSSIAHLG 188
Cdd:PRK12561 261 NIIYGALNAFAQDNVKRRLAYSSVSHMG 288
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
153-300 |
4.23e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 38.86 E-value: 4.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 153 LMLTLGLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTL-SPKLTLLTFYTYIAMTSTMFL----MI-KLLETNK 226
Cdd:MTH00209 241 SLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLnQPELAFFHLITHALFKALLFIcagnIIhSHGHSQD 320
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1935445371 227 ISVMMTSWTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHM-LIIATMMALLSLLSLFFYLRISYYT 300
Cdd:MTH00209 321 IRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMpIMTLILMFLSTSLTAAYSMRLSYFS 395
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
295-340 |
5.80e-03 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 34.54 E-value: 5.80e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 1935445371 295 RISYYTTITLPPNSTNYLQQWRHKINQKHY-LALMTTLSISLLPITP 340
Cdd:pfam06444 5 RLSYSTTLTLFPNTNNSKMKWRFNSTKNTLlLPTLTTLSILLLPLTP 51
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
158-283 |
6.05e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 38.63 E-value: 6.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 158 GLTSTIIGGWNGLNQTQLRKIMAFSSIAHLGwMITiltlspklTLLTFYTYIAMTSTMFLMIKLLeTNKISVMMTS---- 233
Cdd:PRK12648 278 GLITLLLGAYFALFQHDLKGLLAYSTISHLG-LIT--------LLLGLGSPLAAVAAIFHIINHA-TFKASLFMAAgiid 347
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1935445371 234 --------------WTKLPTLNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTKQHML--------IIATMMA 283
Cdd:PRK12648 348 hetgtrdmrrlsglRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFAETLDTHLLgsldwllpVAATLAG 419
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
34-283 |
6.30e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 38.39 E-value: 6.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 34 EISTLAVIPLIAKQHHPRAIEAAIKYFLTQATASTLILFSSIINAWTLGQWS-------ITQMSNNISCTILT----TAL 102
Cdd:PRK12663 138 EVMLIASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNmahiamrLNDMGDTATLTTIAllflLAF 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 103 AIKLGLAPFhFWLPE-------VLQGTTTTTALILTTWQKLAPLSLLMMTAQSMNTPLMLTLGLTSTIIGGWNGLNQTQL 175
Cdd:PRK12663 218 GMKAALFPF-MWLPAayhtpntEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDI 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 176 RKIMAFSSIAHLGWMITILTLSPKLTL--LTFYtyiaMTSTMFLMIKLLETNKISVMMTSWTKLPTLNTM---------- 243
Cdd:PRK12663 297 RRIAGYQVISSIGFILLGLALGTPAGIngAIFY----LVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLyrkeplfgal 372
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1935445371 244 -MMLTLmSLAGLPPLTGFMPKWLIIQ-ELTKQHMLIIATMMA 283
Cdd:PRK12663 373 fLILIF-AIGGLPPFSGFWGKVLLVQgALDNGAYILLALMLI 413
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
6.39e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 38.27 E-value: 6.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 107 GLAPFHFWLPEV-LQGTTTTTALILTTWQKLAPLSLLMMTAQSMNTPL-----MLTLGLTSTIIGGWNGLNQTQLRKIMA 180
Cdd:PRK08042 195 GIIPLHGWVPQAhANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935445371 181 FSSIAHLGwmITILTLSPKLT-----------------LLTFYTYIAMTSTMFLMIKLL----ETNKISVMMTSWTKLPT 239
Cdd:PRK08042 275 YHTLENIG--IILLGLGAGVTgialeqpalialglvggLYHLLNHSLFKSVLFLGAGSVwfrtGHRDIEKLGGIGKKMPV 352
|
170 180 190
....*....|....*....|....*....|...
gi 1935445371 240 LNTMMMLTLMSLAGLPPLTGFMPKWLIIQELTK 272
Cdd:PRK08042 353 ISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| |
