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Conserved domains on  [gi|1934900603|gb|QPF70402|]
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phosphate-starvation inducible protein, partial [uncultured phage]

Protein Classification

P-loop NTPase family protein( domain architecture ID 1562424)

P-loop NTPase (nucleoside triphosphate hydrolase) family protein contains two conserved sequence signatures, the Walker A motif (the P-loop proper) and Walker B motif which bind, respectively, the beta and gamma phosphate moieties of the bound nucleotide (typically ATP or GTP), and a Mg(2+) cation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PhoH super family cl47748
PhoH-like protein; PhoH is a cytoplasmic protein and predicted ATPase that is induced by ...
 2-115 1.27e-22

PhoH-like protein; PhoH is a cytoplasmic protein and predicted ATPase that is induced by phosphate starvation.


The actual alignment was detected with superfamily member pfam02562:

Pssm-ID: 460592 [Multi-domain]  Cd Length: 204  Bit Score: 87.15  E-value: 1.27e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1934900603   2 ALYKAIEEVLDRTnpFNKIIIVRSAVQSrG--IGHLPGDVNDKMDIYKQPylqICETLFAR--KDAWSRLEEQGKIEFIS 77
Cdd:pfam02562  35 AVAMAVDALKNGK--VKRIILTRPAVEA-GekLGFLPGDLEEKVDPYLRP---LYDALYDMlgAEKVEKLLERGVIEVAP 108

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1934900603  78 TSFIRGMSFDDAIIIVDEMQNMNYEEIDTVMTRVGYRS 115
Cdd:pfam02562 109 LAYMRGRTLNDAFIILDEAQNTTPEQMKMFLTRLGFNS 146
 
Name Accession Description Interval E-value
PhoH pfam02562
PhoH-like protein; PhoH is a cytoplasmic protein and predicted ATPase that is induced by ...
 2-115 1.27e-22

PhoH-like protein; PhoH is a cytoplasmic protein and predicted ATPase that is induced by phosphate starvation.


Pssm-ID: 460592 [Multi-domain]  Cd Length: 204  Bit Score: 87.15  E-value: 1.27e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1934900603   2 ALYKAIEEVLDRTnpFNKIIIVRSAVQSrG--IGHLPGDVNDKMDIYKQPylqICETLFAR--KDAWSRLEEQGKIEFIS 77
Cdd:pfam02562  35 AVAMAVDALKNGK--VKRIILTRPAVEA-GekLGFLPGDLEEKVDPYLRP---LYDALYDMlgAEKVEKLLERGVIEVAP 108

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1934900603  78 TSFIRGMSFDDAIIIVDEMQNMNYEEIDTVMTRVGYRS 115
Cdd:pfam02562 109 LAYMRGRTLNDAFIILDEAQNTTPEQMKMFLTRLGFNS 146
YlaK COG1875
Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains [General ...
 2-112 5.24e-19

Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains [General function prediction only];


Pssm-ID: 441479 [Multi-domain]  Cd Length: 441  Bit Score: 80.52  E-value: 5.24e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1934900603   2 ALYKAIEEVLDRtNPFNKIIIVRSAVQ-SRGIGHLPGDVNDKMDIYKQPYLQICETLFARKDA---WSR----LEEQGKI 73
Cdd:COG1875   264 ALAAGLEQVLEE-KRYRKIIVTRPTVPvGEDIGFLPGTEEEKMAPWMQAIYDNLEFLVSSDEKkgeWGRsideLLDRGRI 342

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1934900603  74 EFISTSFIRGMSFDDAIIIVDEMQNMNYEEIDTVMTRVG 112
Cdd:COG1875   343 EIESLTFIRGRSLPNQFVIIDEAQNLTPHQVKTIITRAG 381
 
Name Accession Description Interval E-value
PhoH pfam02562
PhoH-like protein; PhoH is a cytoplasmic protein and predicted ATPase that is induced by ...
 2-115 1.27e-22

PhoH-like protein; PhoH is a cytoplasmic protein and predicted ATPase that is induced by phosphate starvation.


Pssm-ID: 460592 [Multi-domain]  Cd Length: 204  Bit Score: 87.15  E-value: 1.27e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1934900603   2 ALYKAIEEVLDRTnpFNKIIIVRSAVQSrG--IGHLPGDVNDKMDIYKQPylqICETLFAR--KDAWSRLEEQGKIEFIS 77
Cdd:pfam02562  35 AVAMAVDALKNGK--VKRIILTRPAVEA-GekLGFLPGDLEEKVDPYLRP---LYDALYDMlgAEKVEKLLERGVIEVAP 108

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1934900603  78 TSFIRGMSFDDAIIIVDEMQNMNYEEIDTVMTRVGYRS 115
Cdd:pfam02562 109 LAYMRGRTLNDAFIILDEAQNTTPEQMKMFLTRLGFNS 146
YlaK COG1875
Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains [General ...
 2-112 5.24e-19

Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains [General function prediction only];


Pssm-ID: 441479 [Multi-domain]  Cd Length: 441  Bit Score: 80.52  E-value: 5.24e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1934900603   2 ALYKAIEEVLDRtNPFNKIIIVRSAVQ-SRGIGHLPGDVNDKMDIYKQPYLQICETLFARKDA---WSR----LEEQGKI 73
Cdd:COG1875   264 ALAAGLEQVLEE-KRYRKIIVTRPTVPvGEDIGFLPGTEEEKMAPWMQAIYDNLEFLVSSDEKkgeWGRsideLLDRGRI 342

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1934900603  74 EFISTSFIRGMSFDDAIIIVDEMQNMNYEEIDTVMTRVG 112
Cdd:COG1875   343 EIESLTFIRGRSLPNQFVIIDEAQNLTPHQVKTIITRAG 381
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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