|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 807.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 1 MLKIIFPTMMLVPLTWASKPNMIWINTTAYSLLISLVSLTYLNQLSDNSLNFSLLFFTDSLSAPLLVLTTWLLPLMLMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 81 QFHLSKETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 161 LVALLHTQNNLGSLNFLLMQYWTQPLPNSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 241 YGMMRITTLLGPLTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 321 LTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGTNI 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 19343526 401 IITALYSLYMLITTQRGKCTNHVKSIKPSFTRENALMALHLLPLLLLSLNPKMILGPIY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 632.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 1 MLKIIFPTMMLVPLTWASKPNMIWINTTAYSLLISLVSLTYLNQLSDNSLNFSLLFFTDSLSAPLLVLTTWLLPLMLMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 81 QFHLSKETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 161 LVALLHTQNNLGSLNFLLMQYWTQPLPNSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 241 YGMMRITTLLGPLTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 321 LTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGTNI 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 19343526 401 IITALYSLYMLITTQRGKCTNHVKSIKPSFTRENALMALHLLPLLLLSLNPKMILGP 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 590.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 1 MLKIIFPTMMLVPLTWASKPNMIWINTTAYSLLISLVSLTYLNQLSDNSLNFSLLFFTDSLSAPLLVLTTWLLPLMLMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 81 QFHLSKETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 161 LVALLHTQNNLGSLNFLLMQYWTQPLPNSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 241 YGMMRITTLLGPLTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 321 LTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGTNI 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 19343526 401 IITALYSLYMLITTQRGKCTNHVKSIKPSFTRENALMALHLLPLLLLSLNPKMILG 456
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-433 |
1.02e-175 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 500.25 E-value: 1.02e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 1 MLKIIFPTMMLVPLTWASKPNMIWINTTAYSLLISLVSLTYLNQLSDNSLNFSLLFF-TDSLSAPLLVLTTWLLPLMLMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMaTDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 80 SQFHLSKETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 160 LLVALLHTQNNLGSLNFLLMQYWTQPLPNSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 240 GYGMMRITTLLGPLTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 320 GLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGTN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430
....*....|....*....|....*....|....
gi 19343526 400 IIITALYSLYMLITTQRGKCTNHVKSIKPSFTRE 433
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTRE 434
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
8.76e-161 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 461.72 E-value: 8.76e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 3 KIIFPTMMLVPLTWASKPNMIWINTTAYSLLISLVSLTYLNQLSDNSLNFSLLFF-TDSLSAPLLVLTTWLLPLMLMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLsYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 82 FHLSKETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 162 VALLHTQNNLGSLNFLLMQYwtqPLPNSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYF---SKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 242 GMMRITTLLGPLTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 322 TSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGTNII 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 19343526 402 ITALYSLYMLITTQRGKCTNHVKSIKPSFTRENALMALHLLPLLLLSLNPKMI 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
1.38e-148 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 431.32 E-value: 1.38e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 1 MLKIIFPTMMLVPLTWASKPNMIWINTTAYSLLISLVSLTYL-NQLSDNSLNFSLLFFTDSLSAPLLVLTTWLLPLMLMA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLnNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 80 SQFHLSKETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 160 LLVALLHTQNNLGSLNFLLMQYWTQPLPNSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 240 GYGMMRITTLLG-PLTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIA 318
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 319 HGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGT 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 19343526 399 NIIITALYSLYMLITTQRGKCTNHVKSIKPSFTRENALMALHLLPLLLLSLNPKMIL 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
37-433 |
4.07e-118 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 351.83 E-value: 4.07e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 37 VSLTYLNQLSDNSLNFSLLFFTDSLSAPLLVLTTWLLPLMLMASQFhlSKETLTRKKLYITMLVLLQLFLIMTFSAMELI 116
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 117 LFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPNSWssmFLW 196
Cdd:MTH00150 79 MFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 197 LACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGPLTSFMAYPFMMLSLWGMIMTSSIC 276
Cdd:MTH00150 156 LLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLIC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 277 LRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMA 356
Cdd:MTH00150 236 LRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLS 315
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19343526 357 AWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGTNIIITALYSLYMLITTQRGKCTNHVKSIKPSFTRE 433
Cdd:MTH00150 316 LWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSE 392
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-433 |
3.66e-116 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 347.91 E-value: 3.66e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 1 MLKIIFPTMMLVPLtwaSKPNMIWINTTAYSLLISLVSLTYLNqLSDNSLNFSLLFFTDSLSAPLLVLTTWLLPLMLMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPL---CFLKNSWWLVQSLLFLLSFLFMLLFS-LSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 81 QfhLSKETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00163 77 E--SVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 161 LVALLHTQNNLGSLNFLLMQYwtqplpNSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 241 YGMMRITTLLGPLTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 321 LTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGTNI 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430
....*....|....*....|....*....|...
gi 19343526 401 IITALYSLYMLITTQRGKCTNHVKSIKPSFTRE 433
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVRE 421
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
8-428 |
7.40e-105 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 319.23 E-value: 7.40e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 8 TMMLVPLTWASKPNMIWINTTAYSLLISLVSLTYLNQLSDNSLNFSLLFFTDSLSAPLLVLTTWLLPLMLMASQFHLSKE 87
Cdd:MTH00205 5 GVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 88 TltRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHT 167
Cdd:MTH00205 85 K--NSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 168 QNNLGSLNFLLMQYWTQplpNSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIT 247
Cdd:MTH00205 163 NSLNFSLSMFFNFPLNF---SDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRIT 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 248 TLLGPLTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLF 327
Cdd:MTH00205 240 SMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMF 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 328 CLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGTNIIITALYS 407
Cdd:MTH00205 320 ALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYS 399
|
410 420
....*....|....*....|.
gi 19343526 408 LYMLITTQRGKCTNHVKSIKP 428
Cdd:MTH00205 400 LYLYSQSQHGKVSSQISSFLA 420
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-421 |
1.05e-99 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 305.90 E-value: 1.05e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 1 MLKIIFPTMMLVPLTWASKPNmIWINTTAYSLLISLVSLTYLNQLSDNSLNFSLLFFTDSLSAPLLVLTTWLLPLMLMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPW-SWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 81 QFHLSKETLTrkKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00014 80 FKIFQNNKAP--KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 161 LVALLHTQNNLGSLNFLLMQYWTqplPNSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEP---PSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 241 YGMMRITTLLGPLTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 321 LTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGTNI 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420
....*....|....*....|.
gi 19343526 401 IITALYSLYMLITTQRGKCTN 421
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPS 415
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
9-433 |
1.78e-84 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 267.72 E-value: 1.78e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 9 MMLVPLTWASKPNMIWINTTAYSLLISLVSLTYLNQLSDN-----------SLNFSLLFFTDSLSAPLLVLTTWLLPLML 77
Cdd:COG1008 20 LLLLPRRNARLARWVALAVSLLTLLLSLYLLAGFDPGTGGfqfvesypwipSLGISYHLGVDGISLPLVLLTALLTPLAI 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 78 MASqfhlSKETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQtERLNAGLYFLFYTLVGS 157
Cdd:COG1008 100 LAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGE-RRIYAAIKFFLYTLAGS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 158 LPLLVALLHTQNNLGSLNFLLMQYWTQPLPNSWSsMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLK 237
Cdd:COG1008 175 LLMLVAILALYFLAGALTFDIAELAAAPLPLTAQ-LLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLK 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 238 LGGYGMMRITTLLGPLTSFMAYPFMM-LSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALM 316
Cdd:COG1008 254 MGGYGLLRFALPLFPEASAYFAPLLAaLGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQM 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 317 IAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLM 396
Cdd:COG1008 334 VSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILA 413
|
410 420 430
....*....|....*....|....*....|....*..
gi 19343526 397 GTNIIITALYSLYMLITTQRGKCTNHVKSIKPSFTRE 433
Cdd:COG1008 414 ALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRE 450
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
59-427 |
3.86e-79 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 254.36 E-value: 3.86e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 59 DSLSAPLLVLTTWLLPLMLMASQFHLSKetltRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGn 138
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG- 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 139 QTERLNAGLYFLFYTLVGSLPLLVALL----HTQNNLGSLNFL-LMQYwtqPLPNSWSsMFLWLACMMAFMVKMPLYGLH 213
Cdd:PRK05846 156 GKNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIAdLLNL---PLPPGVQ-YWLFLAFFIAFAVKMPMFPLH 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 214 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGPLTS-FMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVS 292
Cdd:PRK05846 232 TWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDAShEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSIS 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 293 HMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPT 372
Cdd:PRK05846 312 HMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGT 391
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 19343526 373 INLIGELFVVVATFSWSNITITLMGTNIIITALYSLYMLITTQRGKCTNHVKSIK 427
Cdd:PRK05846 392 SGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLK 446
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
59-459 |
1.19e-74 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 242.15 E-value: 1.19e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 59 DSLSAPLLVLTTWLLPLMLMASQFHLSKetltRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGN 138
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 139 QTeRLNAGLYFLFYTLVGSLPLLVALLHtQNNLGSLNFLLMQYWTQPLPNSWSsMFLWLACMMAFMVKMPLYGLHLWLPK 218
Cdd:TIGR01972 152 PN-RIYAAMKFFLYTLAGSLLMLLAILG-LYFLGGGTFDLLELLNLPLPFGVQ-TWLFLAFFIAFAVKVPLFPLHTWLPD 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGPLTSFMAYPFMM-LSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:TIGR01972 229 AHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAaLGVIAIIYGALIALAQTDIKRLIAYSSISHMGFV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 298 IVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIG 377
Cdd:TIGR01972 309 LLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVG 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 378 ELFVVVATFSWSNITITLMGTNIIITALYSLYMLITTQRGKCTN-HVKSIKPSFTRENALMALHLLPLLLLSLNPKMILG 456
Cdd:TIGR01972 389 EFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNpEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLD 468
|
...
gi 19343526 457 PIY 459
Cdd:TIGR01972 469 LTE 471
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
1.71e-68 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 219.88 E-value: 1.71e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 112 AMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPNSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 192 SMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGPLTSFMAYPFMMLSLWGMIM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 272 TSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANS-NYERIHSRTMILARGLQT 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 19343526 351 LLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGT 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
45-410 |
4.49e-67 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 222.25 E-value: 4.49e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 45 LSDNSLNF---SLLFFTDSLSAPLLVLTTWLLPLMLMASQfhlsKETLTRKKLYITMLVLLQLFLIMTFSAMELILFYIL 121
Cdd:MTH00204 65 IISPTLNFqwgPLVFAVDGVSLFFILLTTLLIPICILISW----KSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYIL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 122 FEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPnswSSMFLWLACMM 201
Cdd:MTH00204 141 FEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLS---IQKWLLVGFFL 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 202 AFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGPLTSFMAYPFM-MLSLWGMIMTSSICLRQT 280
Cdd:MTH00204 218 SLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIvMLSVIAVIYGSLTTCRQV 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 281 DLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWL 360
Cdd:MTH00204 298 DFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIML 377
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 19343526 361 LASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGTNIIITALYSLYM 410
Cdd:MTH00204 378 VLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
53-410 |
3.87e-66 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 219.92 E-value: 3.87e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 53 SLLFFTDSLSAPLLVLTTWLLPLMLMAS----QFhLSKEtltrkklYITMLVLLQLFLIMTFSAMELILFYILFEATLVP 128
Cdd:MTH00217 73 PVVFAVDGISIFFLILTALLTPICILISwnsiKF-LIKE-------FLLCLLVIEILLMGVFTILDLVGFYILFEGILIP 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 129 TLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFllmQYWTQPLPNSWSSMFLWLACMMAFMVKMP 208
Cdd:MTH00217 145 MFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDY---QALCCLKIEKELQYFIFLGFFLSLAIKIP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 209 LYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGPLTSFMAYPFMM-LSLWGMIMTSSICLRQTDLKSLIA 287
Cdd:MTH00217 222 KIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQtLSLLAIIYGSLTTCRQVDLKRIIA 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 288 YSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNL 367
Cdd:MTH00217 302 YSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANA 381
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 19343526 368 SLPPTINLIGELFVVVATFSWSNITITLMGTNIIITALYSLYM 410
Cdd:MTH00217 382 SIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
54-409 |
1.54e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 210.93 E-value: 1.54e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 54 LLFFTDSLSAPLLVLTTWLLPLMLMASQFHLSKETltrKKLYITMLVLlQLFLIMTFSAMELILFYILFEATLVPTLVII 133
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILISWHSVKYLT---KSFLICMLIL-EFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 134 TRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPNSwSSMFLWLACMMAFMVKMPLYGLH 213
Cdd:MTH00226 172 GIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQ-TQKWIFLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 214 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGPL-TSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVS 292
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 293 HMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPT 372
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350
....*....|....*....|....*....|....*..
gi 19343526 373 INLIGELFVVVATFSWSNITITLMGTNIIITALYSLY 409
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
54-430 |
5.03e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 167.01 E-value: 5.03e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 54 LLFFTDSLSAPLLVLttwllpLMLMASQFHLSKETLTRKKLYITMLVLLQLFLIMTfsaMELILFYILFEATLVPTLVII 133
Cdd:MTH00094 32 LFFFFDSFVFVLLIF------MMVFILGLVLLSEKNFNLLILSNLLILICLLFFVS---SNMLMLYMFFELSMFPILIMI 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 134 TRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHtqnnlgslNFLLMQYWTQPLPNSWSSMFLwlaCMMAFMVKMPLYGLH 213
Cdd:MTH00094 103 LGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK--------NFFFFSLCYFDFFLSWEMFFI---LSLSFMMKFPVYFLH 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 214 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIttlLGPLTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:MTH00094 172 LWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI---LGSLNFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTH 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 294 MALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTI 373
Cdd:MTH00094 249 MSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSL 328
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 19343526 374 NLIGELFVVVATFSWSNITITLMGTNIIITALYSLYMLITTQRGKCTNHVKSIKPSF 430
Cdd:MTH00094 329 SFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGL 385
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-411 |
3.15e-45 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 164.43 E-value: 3.15e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 59 DSLSAPLLVLTTWLLPLMLMASQfhlskeTLTRK-KLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWG 137
Cdd:PRK12561 58 DGLSMPLVLLSGLITTLSIFASW------KVTRKpRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWG 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 138 NQtERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPNSWSsMFLWLACMMAFMVKMPLYGLHLWLP 217
Cdd:PRK12561 132 GQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALE-LLLYAGFLIAFGVKLPIFPLHTWLP 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 218 KAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGPLTS-FMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMAL 296
Cdd:PRK12561 210 DAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHvYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGF 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 297 VIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLI 376
Cdd:PRK12561 290 VLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFV 369
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 19343526 377 GELFVVVA-------TFSWSNITITLMGTNIIITALYSLYML 411
Cdd:PRK12561 370 SELTVFLGitssdvySSTFRTITILLAAVGLILTPIYLLSML 411
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-412 |
3.59e-42 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 154.53 E-value: 3.59e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 52 FSLLFFTDSLSAPLLVLTTWLLPLMLMASQFHLSKETltRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLV 131
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYG 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 132 IITRWGNQtERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPNSWSSMFLWLAcMMAFMVKMPLYG 211
Cdd:COG0651 146 LVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFALL-LVGFGIKAALFP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 212 LHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGP--LTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYS 289
Cdd:COG0651 224 LHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 290 SVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSL 369
Cdd:COG0651 304 SVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGL 383
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 19343526 370 PPTINLIGELFVVVATFSWSNITITLMgtnIIITALYSLYMLI 412
Cdd:COG0651 384 PPLSGFVSKWLLLQAALEAGAWLLAAV---LLLSSLLTLAYFV 423
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-428 |
1.91e-41 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 154.09 E-value: 1.91e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 48 NSLNFSLLFFTDSLSAPLLVLTTWLLPLMLMASQfhlskETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLV 127
Cdd:PRK06473 67 DSLGLSYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELI 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 128 PTLVIITRWGNQtERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPNSwSSMFLWLACMMAFMVKM 207
Cdd:PRK06473 142 PLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKI 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 208 PLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGPLTSFMAYPFM-MLSLWGMIMTSSICLRQTDLKSLI 286
Cdd:PRK06473 220 PLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMV 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 287 AYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGL---QTLLPLMAAWWLLAS 363
Cdd:PRK06473 300 AYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGV 379
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 19343526 364 LTNLSLPPTINLIGELFVVVATFSWSNITITLMGTNIIITALYSLYMLITTQRGKCTNHVKSIKP 428
Cdd:PRK06473 380 MASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPR 444
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
58-411 |
5.00e-37 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 142.15 E-value: 5.00e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 58 TDSLSAPLLVLTTWLLPLMLMASQfhlsKETLTRKKLYITMLVLLQlFLIMTFSAMELILFYILFEATLVPTLVIITRWG 137
Cdd:PRK02546 85 ADGLSMPLILLTGFITTLAVLAAW----PVTFKPKLFYFLMLAMYG-GQIAVFAVQDMLLFFLAWELELIPVYLLLAIWG 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 138 NQtERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPNSWSsMFLWLACMMAFMVKMPLYGLHLWLP 217
Cdd:PRK02546 160 GK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQ-LLCYAGLLIAYGVKLPIVPLHTWLP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 218 KAHVEAPIAGSMVLAAVLLKLGGYGMMRITT-LLGPLTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMAL 296
Cdd:PRK02546 238 DAHGEATAPVHMLLAGILLKMGGYALLRMNAgMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 297 VIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLI 376
Cdd:PRK02546 318 VLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFV 397
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 19343526 377 GELFVVVA-------TFSWSNITITLMGTNIIITALYSLYML 411
Cdd:PRK02546 398 AELMVFVGfatsdayTLPFRVVVVFLAAVGVILTPIYLLSML 439
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
48-411 |
4.46e-35 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 136.23 E-value: 4.46e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 48 NSLNFSLLFFTDSLSAPLLVLTTWLLPLMLMASQfhlskeTLTR--KKLYITMLVLL--QlflIMTFSAMELILFYILFE 123
Cdd:CHL00011 72 NFFDFHWRLGIDGLSIGPILLTGFITTLATLAAW------PVTRnsRLFYFLMLAMYsgQ---IGLFSSRDLLLFFIMWE 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 124 ATLVPTLVIITRWGNQtERLNAGLYFLFYTLVGSLPLLVALLHTQ---NNLGSLNFLLMQYWTQPLPnswSSMFLWLACM 200
Cdd:CHL00011 143 LELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGlygSNEPTLNFETLANQSYPVA---LEILFYIGFL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 201 MAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGPLTSFMAYPFMML-SLWGMIMTSSICLRQ 279
Cdd:CHL00011 219 IAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIvGAIQIIYAASTSLGQ 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 280 TDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIhsRTMILAR--GLQTLLPLMAA 357
Cdd:CHL00011 299 RNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFT 376
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 19343526 358 WWLLASLTNLSLPPTINLIGELFVV--VAT----FSWSNITIT-LMGTNIIITALYSLYML 411
Cdd:CHL00011 377 MFSSFSMASLALPGMSGFVAELIVFfgIITsqkyLLMPKILITfVMAIGMILTPIYLLSML 437
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
41-422 |
8.29e-35 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 135.61 E-value: 8.29e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 41 YLNQLSDNSLNFSLLffTDSLSAPLLVLTTWLLPLMLMASQfhlskETLTRKKLYITMLVLLQLFLIMTFSAMELILFYI 120
Cdd:PRK07363 62 YLPWNEPLGLSYSLG--VDGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 121 LFEATLVPTLVIITRWGNQtERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPNSwSSMFLWLACM 200
Cdd:PRK07363 135 FYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 201 MAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGPLTSFMAYPfmMLSLWGMIMT---SSICL 277
Cdd:PRK07363 213 LGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTISViygALSAI 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 278 RQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTL---LPL 354
Cdd:PRK07363 291 AQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPL 370
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 19343526 355 MAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGTNIIITALYSLYMLITTQRGKCTNH 422
Cdd:PRK07363 371 TSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNK 438
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
1.61e-24 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 97.60 E-value: 1.61e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 1 MLKIIFPTMMLVPLTWASKPNMIWINTTAYSLLISLVSLTYLNQLSDNSLNF-SLLFFTDSLSAPLLVLTTWLLPLMLMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNlSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 19343526 80 SQFHLSKETLTRKKLYITMLVLLQLFLIMT 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-387 |
2.30e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 102.26 E-value: 2.30e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 56 FFTDSLSAPLLVLTTWLlplMLMASQFHLSKETLTRKKLYITMLVLLQLFLIMTFSAmELILFYILFEATLVPTLVIITR 135
Cdd:PRK08375 73 LRADSLSALFLLVTSIL---AIAALLYAIGYGEHRQTRFYALFLLLLAGLLGALLTA-DLFNLFVFLEIMSLSSYALVAM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 136 WGNQtERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPNSWSSMFLwlaCMMAFMVKMPLYGLHLW 215
Cdd:PRK08375 149 GGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENPTVVTAFGF---VLLALALKAAVFPLHTW 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 216 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITtLLGPLTSFMAYP-----FMMLSLWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK08375 225 LPRAYPAAPPVVTALLSGLVTKVAVYALIRIY-FTVFGGDFRFALglgwlLAVLALLSMLVGSLAALGQDDVKRVLAYST 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 291 VSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLP 370
Cdd:PRK08375 304 VSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVP 383
|
330
....*....|....*..
gi 19343526 371 PTINLIGELFVVVATFS 387
Cdd:PRK08375 384 PTSGFVSKWYLVVGAVE 400
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-411 |
7.32e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 98.12 E-value: 7.32e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 59 DSLSAPLLVLTTWLLPLMLMASQFHLSKETLtrKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGN 138
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESG--PEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 139 QTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPNS----------WSSMFLWLACMMAFMVKMP 208
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPltgglagnppLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 209 LYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI-------TTLLGPLTSFMAYPFMMLSLWGMIMTSSICLRQTD 281
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 282 LKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLL 361
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 19343526 362 ASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGtnIIITALYSLYML 411
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL--LIASAISLVGYF 446
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
24-387 |
2.50e-20 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 92.68 E-value: 2.50e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 24 WINTTAYSLLISLVSLTYLNQLSDNSLN-FSLLFFTDSLSAPLLvlttwLLPLMLMASQFHLSKETLTRKKLYitMLVLL 102
Cdd:MTH00062 8 FFLGFLLLLLFCLLYSSGVGCCILVVNNvFNGLFIFDSLSFYLI-----LLVLFLGLYSQVMFYNLLSGVSRF--FLFLS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 103 QLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYw 182
Cdd:MTH00062 81 LIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGS- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 183 tqplPNSWSSMFLWLACMMaFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGPLtSFMAYPFM 262
Cdd:MTH00062 160 ----DDSVSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSG-SFLGYLFL 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 263 MLSLWGMIMTSSicLRQTDLKSLIAYSSVSHMaLVIVAVLIQTPWSYMGATALM-IAHGLTSSLLFCLANSNYERIHSRT 341
Cdd:MTH00062 234 CCLFSVFFLITA--CSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVFLLLWCFYEVSGSRN 310
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 19343526 342 MILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFS 387
Cdd:MTH00062 311 WVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFG 356
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-413 |
3.85e-19 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 89.60 E-value: 3.85e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 206 KMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLL--GPLTSFMAYPFMMLSLWGMIMTSSICLRQTDLK 283
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 284 SLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLAS 363
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 19343526 364 LTNLSLPPTINLIGELFVVVATFSWSNITITLMGTNIIITALYSLYMLIT 413
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVA 436
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
98-371 |
8.95e-15 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 76.47 E-value: 8.95e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 98 MLVLLQLFLimtfSAMELIL-------FYILFEA-TLVPTLVIITrwgNQTERLN--AGLYFLFYTLVGSLPLLVALLHT 167
Cdd:PRK06521 115 MGFFYNLFL----ASMVLVLladdafsFLVAWETmSLSSWFLVIA---NHREAEIrrAGFLYLLMAHAGALAILLAFGLL 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 168 QNNLGSLNFLLMQywTQPLPNSWSSMFLWLAcMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIT 247
Cdd:PRK06521 188 ARESGSYDFAAMR--AAHLSPFWASLVFLLA-LFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVV 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 248 -TLLGPLTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAV---LI-----QTPWSYMGATALM-- 316
Cdd:PRK06521 265 fDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLglaMVfiaygMPLLAALALTAALyh 344
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 19343526 317 -IAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPP 371
Cdd:PRK06521 345 lLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPP 400
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
90-327 |
8.99e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 73.49 E-value: 8.99e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 90 TRKKLYITMLVLLQLF-LIMTFSAMELILFYILFEATLVPTLVIITRwGNQTERLNAGLYFLFyTLVGSLPLLVALLHTQ 168
Cdd:PRK08668 94 TKNDAYFNMFALMSLAgVLGVFLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIY 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 169 NNLGSLNFLLMQYWTQPLPNSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGM----- 243
Cdd:PRK08668 172 AKTGTFDFADISQGLINDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFllvly 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 244 -MRITTLLGPLTSFM-----AYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMI 317
Cdd:PRK08668 252 vLPGTKLFSEFGTYRgvplfNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVF 331
|
250
....*....|
gi 19343526 318 AHGLTSSLLF 327
Cdd:PRK08668 332 NHALFKGLFF 341
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-379 |
1.71e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 72.31 E-value: 1.71e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 108 MTFSAMELILFYILFEATLVPTLVIITRwGNQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLP 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 188 nSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGPLTSfMAYPFMMLSLW 267
Cdd:PRK12665 205 -SGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGG-LDTLLMVVALL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 268 GMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARG 347
Cdd:PRK12665 283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGG 362
|
250 260 270
....*....|....*....|....*....|..
gi 19343526 348 LQTLLPLMAAWWLLASLTNLSLPPTINLIGEL 379
Cdd:PRK12665 363 LAKASPLLAVLFFVPALNLGGIPPFSGFIGKV 394
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
52-386 |
2.67e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 72.07 E-value: 2.67e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 52 FSLLFFTDSLSAPLLVLTTWLLPLMLMASQFHLSK-ETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTL 130
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHmSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 131 VIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPNSWSSMFLwlacmmAFMVKMPLY 210
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFLLLFL------GFGIKAGII 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 211 GLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIttLLGPLTSFMAYPFMMLSLwGMI---MTSSICLRQTDLKSLIA 287
Cdd:PRK08667 223 PFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRF--LMDVLSPELWWGVLILLA-GSIsalLGVIYALKEHDLKGLLA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 288 YSSVSHMALVIVAVLIQTPWSYMGATALM-----------IAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMA 356
Cdd:PRK08667 300 YSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTS 379
|
330 340 350
....*....|....*....|....*....|
gi 19343526 357 AWWLLASLTNLSLPPTINLIGELFVVVATF 386
Cdd:PRK08667 380 ALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
22-411 |
2.14e-12 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 68.82 E-value: 2.14e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 22 MIWINTTAYSLLISLVSLTYLNQLSDNSLN-------FSLLFFTDSLSApLLVLTTWLLPLMLMASQFHlSKETLTRKKL 94
Cdd:PRK12663 32 YLAIGTLTILTLISLALLIYVQRHGPITLDfggwlppFGIQFTGDSLSA-LMVTTASFVATAIMAYGFG-DIEHSGRRYG 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 95 YITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITrWGNQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSL 174
Cdd:PRK12663 110 FPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 175 NFLLMQYWTQPLPNSWSSMFLWLACMMAFMVKMPLYGLHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLL---- 250
Cdd:PRK12663 189 NMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqe 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 251 ----GPLTSFMAYPFMMLSLWGMimtssicLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLL 326
Cdd:PRK12663 268 rellHPLLATMAAITMVIGALGA-------LAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTAL 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 327 FCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMgtnIIITALY 406
Cdd:PRK12663 341 FLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLAL---MLITSLI 417
|
....*
gi 19343526 407 SLYML 411
Cdd:PRK12663 418 TMYSL 422
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
101-327 |
4.06e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 67.86 E-value: 4.06e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 101 LLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWgNQTERLNAGLYFLF-------YTLVGsLPLLVALLHTQNNLGS 173
Cdd:PRK08676 110 LLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAIL-SARENIDAALKYIFiastamiFAFIG-LIFLFSLTRQALGTGT 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 174 LNFLLMQYWTQPLPnswSSMFLWLACMM--AFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLG 251
Cdd:PRK08676 188 LNWTELAAHASLLS---PSVLGASFLFIfiGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLR 264
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 19343526 252 PLTSFMAYPFMMLSLwGMIMTSSIC---LRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLF 327
Cdd:PRK08676 265 QSGAAEQFSNVLIGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLF 342
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
83-418 |
4.30e-12 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 68.24 E-value: 4.30e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 83 HLSKETLTRKKLYItMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLV 162
Cdd:PRK12646 101 YLSSRKDNLPRFYF-YLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLV 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 163 A--LLHTQNNLGSLNFLLMQywTQPLPNSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLG 239
Cdd:PRK12646 180 GfiMLYIMTGTNNITEILGQ--ADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAG 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 240 GYGMMRITTLLGpLTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAV-----LIQTPWSYMGATA 314
Cdd:PRK12646 257 IFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIASIY 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 315 LMIA---------HGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLpPTIN--LIGELFV-- 381
Cdd:PRK12646 336 VFVLfaalfhlmnHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGV-PFLNgfLSKEMFLda 414
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 19343526 382 VVATFSWSNITITLMGTNIII-------TALYSLYMLITTQRGK 418
Cdd:PRK12646 415 LTQTGQLSQFSLISMIIIVFIgviasifTFTYALYMVKEVFWGK 458
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
115-418 |
9.95e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 67.10 E-value: 9.95e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 115 LILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFllmQYWTQPLPNSWSSMF 194
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNF---SELLAAAPTILSSPL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 195 LWLACMMAF---MVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITTLLGpLTSFMAYPFMMLSLWGMI 270
Cdd:COG1009 210 LTLILLLLLlgaFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAITAL 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 271 MTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQtpwSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQT 350
Cdd:COG1009 288 FAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRK 364
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 19343526 351 LLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGTNII---ITALYSLYMLITTQRGK 418
Cdd:COG1009 365 KMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVFFGK 435
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
172-398 |
1.30e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 66.30 E-value: 1.30e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 172 GSLNFLLMQYWTQPLPNSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIT-TLL 250
Cdd:PRK12662 188 GTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVyDVF 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 251 GPLTSFMAYPF----MMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLL 326
Cdd:PRK12662 268 KANFVFTTLPFnnvfMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSAL 347
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 19343526 327 FCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFS---WSNITITLMGT 398
Cdd:PRK12662 348 FMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKsnaWIGLVVLLVGS 422
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
32-339 |
6.95e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 64.20 E-value: 6.95e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 32 LLISLVSLTYLNQLSDNSLNFSLLFFT--------DSLSAPLLVLTTwllpLMLMASQFHLSKETLTRkkLYITMLVLLQ 103
Cdd:PRK07234 31 LGMAIVSAVYALGLVASMVPLELTLLDnfgvtlraDALSGYFILTNA----LVTLAVIFYCWESAKTR--FFYAQLLILH 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 104 LFLIMTFSAMELILFYILFEATLVPTLVIITrWGNQTERLNAGLYFLFYTLVGSLPLLV-ALLHTQNNlGSLNFllmqyw 182
Cdd:PRK07234 105 GSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIgAVLVYQAN-GTFAF------ 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 183 tQPLPNSWSSMFLWLAcmMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRittlLGPLTSFMAYPFM 262
Cdd:PRK07234 177 -SGLATADPEAFALIA--LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVR----CALDVPGLDLIVR 249
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19343526 263 MLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIqtpwsymgATALMIAHGLTSSLLFCLANSNYERIHS 339
Cdd:PRK07234 250 IFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLCAGALPSRNFT 318
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
91-401 |
6.97e-11 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 64.22 E-value: 6.97e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 91 RKKLYITMLVLLQLFLIMTFSAMELILFyILFEATLVPTLVIITRWGNQtERLNAGLYFLFYTLVGSLPLLVALLHTQNN 170
Cdd:PRK06525 112 TGRYYAFLLLFIGAMAGLVYSSTLLGLL-LFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQ 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 171 LGSLNFLLMQYWTQPLpnswsSMFLWLACMMAFMVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITTL 249
Cdd:PRK06525 190 TGTFALSALSGLHGSL-----KYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQS 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 250 LGPLTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYM---GATALMIAHGLTSSLL 326
Cdd:PRK06525 264 MGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGSRLaleGSIAYIFNHAFAKSLF 343
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 19343526 327 FCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGTNII 401
Cdd:PRK06525 344 FLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
213-377 |
1.57e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 63.40 E-value: 1.57e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 213 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITTLLGPLTSFmaypFMMLSLWG---MIMTSSICLRQTDLKSLIAY 288
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARLNPVLGGTPLW----QTILPLFGgltMLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 289 SSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLS 368
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
....*....
gi 19343526 369 LPPTINLIG 377
Cdd:PRK12647 370 LPPLFGFLA 378
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
200-387 |
1.58e-10 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 62.86 E-value: 1.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 200 MMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGPLTSFMAYPFMM--LSLWGMIMTSSICL 277
Cdd:PRK08377 213 IFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLViiMATLTVFFAELSAL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 278 RQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAA 357
Cdd:PRK08377 293 RQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTAL 372
|
170 180 190
....*....|....*....|....*....|
gi 19343526 358 WWLLASLTNLSLPPTINLIGELFVVVATFS 387
Cdd:PRK08377 373 ALTIGALSTVGIPLFNVFWSKFRIILAGLS 402
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-371 |
2.62e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 62.42 E-value: 2.62e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 95 YITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLL--VALLHTQNNLG 172
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLlgIALLYGQYGTL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 173 SLNFLLMQYWTQPLPNSWSSMFLWLAcmmAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLaaVLLKLGG-YGMMRIT-TLL 250
Cdd:PRK08376 203 NMAYLAVKMSENPTVVAKIALALFIA---GLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLfSIY 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 251 GPL--TSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVS---HMAL---VIVAVLIQTPWSYMGATAL------M 316
Cdd:PRK08376 278 GPAinLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSqigYMLLglgVGLAALGDPAMASYGEIALaggiyhI 357
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 19343526 317 IAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPP 371
Cdd:PRK08376 358 VNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPP 412
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-412 |
4.55e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 61.50 E-value: 4.55e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 52 FSLLFFTDSLSAPLLVLTTWLLPLMLMASQFHLSKEtltRKKLYITMLVLLQLF-LIMTFSAMELILFYILFEATLVPTL 130
Cdd:PRK07691 69 FGIVFVADMFAALLVLTSSIITFLVILYSFQTIGIE---RERYYYYPSVLFMLAgVNGAFLTGDIFNLFVFFEVMLMASY 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 131 VIITRWGNQTErLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPNSWSSMFLWLAC--MMAFMVKMP 208
Cdd:PRK07691 146 VLIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGLITVVAIlfLFVFATKAG 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 209 LYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGP-LTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIA 287
Cdd:PRK07691 225 LFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFShDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIII 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 288 YSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNL 367
Cdd:PRK07691 305 YNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLA 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 19343526 368 SLPPTINLIGELFVVVATFSWSNITITLMgtnIIITALYSLYMLI 412
Cdd:PRK07691 385 GIPPLSGFYGKFFIVEGTFEAGFYVSGII---VLLSSLLVLYSVI 426
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-411 |
1.89e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 59.44 E-value: 1.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 51 NFSLLFFTDSLSAPLLVLTTWLLPLMLMASQFHLSKETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTL 130
Cdd:PRK06589 74 NYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 131 VIITrWGNQTERLNAGLYFLFYTLVGSLPL-LVALLHTQNNLGSLNFLLMQYWTQPLPNSWSSMFLWLacmmafMVKMPL 209
Cdd:PRK06589 154 FLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYG------IAKTAI 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 210 YGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTL---LGPLTSF--MAYPFMMLSLWGMIMTSSICLRQTDLKS 284
Cdd:PRK06589 227 FPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRIfaEFNWLIFIPIVSIFYSSLKALKTDNIKK 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 285 LIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASL 364
Cdd:PRK06589 307 ILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSL 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 19343526 365 TNLSLPPTINLIGELFVVVATFSWSNIT--ITLMGTNIIITALYSLYML 411
Cdd:PRK06589 387 SLIGIPIFSGFISKFLILLAASEQNQPWlsIIVMLVVIASSILSALYLL 435
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
129-327 |
7.76e-09 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 57.98 E-value: 7.76e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 129 TLVIitrWGNQTER-LNAGL-YFLFYTLVGSLPLLVALLHTQNNlGSLNFLLMQywtqplpnSWSSMFLWLAcMMAFMVK 206
Cdd:PRK12668 130 TFLV---WARGTKAaVRAGFrYLLVHVLGGVLLLAGILLHYAET-GSFAFGAIA--------GLGGTAAWLI-LIGFGVN 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 207 MPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRittllgpltsfmAYPFMMLSLW-GMIMT---SSICLRQTDL 282
Cdd:PRK12668 197 AAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR------------AFPGTELLIYiGAAMAvygVFFALLENDL 264
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 19343526 283 KSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLF 327
Cdd:PRK12668 265 RRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
38-330 |
1.51e-08 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 57.36 E-value: 1.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 38 SLTYLNQLSDNSLNFSLLFFTDSLSaplLVLTtwLLPLMLMASQFHLSKETLTRKKLYITMLVLLQLF---LIMTFSAME 114
Cdd:PRK12650 57 SVTWIPDLLGNGVDVNLALRADALS---LFFA--LLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFmaaMLLLVLADD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 115 LILFYILFEATLVPTLVIITRWGNQTErlNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNF---LLMQYWTQPlpNSWS 191
Cdd:PRK12650 132 VVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLsgiLHSDVWAEK--PGLT 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 192 SMFLWLACMMAFmVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGPLTSFMAypfmMLSLWGM-- 269
Cdd:PRK12650 208 TVVAVLIAVAAF-TKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNW----LLIIVGMit 282
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 19343526 270 -IMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLA 330
Cdd:PRK12650 283 aLMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLI 344
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-393 |
2.80e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 53.04 E-value: 2.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 59 DSLSAPLLVLTTWLLPLMLMASQFHLSKET-LTRKKLYITMLVLLQLFLIMTFSAMELilfYILFEATLVPTLVIITRWG 137
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLFTFLMMVLVTSDNYLQL---FIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 138 NQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQ------------------YWTQPLPNSWSSMFLWLAC 199
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsvgsgimdrgyygggaYESPLAPFAIIGILLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 200 MMafmvKMPLYGLHLWLPKAhVEAPI-------AGSMVLAAVLLKLGGYGMMR-------ITTLLGPLTSFMAypfmmls 265
Cdd:MTH00032 236 IG----KSAQLGLHTWLPDA-MEGPTpvsalihAATMVTAGVFLMIRSFPLFEkapltllIITIFGALTAFFA------- 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 266 lwgmimtSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTpwSYMGATALMIAHGLTSSLLFCLANS-----NYERIHSR 340
Cdd:MTH00032 304 -------ATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAGSvihstTVDEQDMR 374
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 19343526 341 TMilaRGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITI 393
Cdd:MTH00032 375 KM---GGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTYSGRNMGI 424
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-409 |
3.84e-07 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 52.43 E-value: 3.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 9 MMLVPLTWASKPNMIWINTTAYSLLISLVsLTYLNQLSDNSLNFSLLFFTDSLSAPLLVLTTWLLPLMLMASQFHLSKET 88
Cdd:COG1007 20 LLLLDLFLPRRSRRLLAGLALLGLLLALA-LLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRG 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 89 LTRKKLYITMLVLLqLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGL-YFLFYTLVGSLPLL-VALLH 166
Cdd:COG1007 99 LLRGEFYALLLFAT-LGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGFLLYgISLLY 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 167 TQnnLGSLNFLLMQYWTQPLPNSwsSMFLWLACMM---AFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM 243
Cdd:COG1007 178 GA--TGSLNLAGIAAALAAGGAN--SPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAA 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 244 -MRI-TTLLGPLTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGL 321
Cdd:COG1007 253 lLRLlVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLF 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 322 TSSLLFCLANSNYERIHSRTMILA-RGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGtni 400
Cdd:COG1007 333 MNLGAFAVILLLSRKGGEAEEIEDlAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIA--- 409
|
....*....
gi 19343526 401 IITALYSLY 409
Cdd:COG1007 410 VLNSVISAY 418
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-390 |
5.48e-07 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 52.14 E-value: 5.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 155 VGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPnswSSMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAV 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLP---LGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 235 LLKLGGYGMMRITTLLGPLTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV-------IVAVLIQTP- 306
Cdd:PRK08042 222 VMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPa 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 307 ---WSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVV 383
Cdd:PRK08042 302 liaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
....*..
gi 19343526 384 ATFSWSN 390
Cdd:PRK08042 382 SFFKLSN 388
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
115-327 |
3.16e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 49.92 E-value: 3.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 115 LILFYILFEATLVPTLVIItrwGNQTERLN---AGLYFLFYTLVGSLPLLVALLHTQNNLGSLNF--LLMQYWTQPLPNs 189
Cdd:PRK12644 128 LLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGTYRLseLLADPPTGPAVS- 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 190 wssmfLWLACMMAFMV-KMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITTLLGPLTSFMaYPFMMLSLW 267
Cdd:PRK12644 204 -----VAVVLILVGALsKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLAPGFADVPVWR-PTVLVLGLA 276
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 268 GMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLF 327
Cdd:PRK12644 277 TMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
213-387 |
7.48e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 48.28 E-value: 7.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 213 HLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-MRI-TTLLGPLTSFMAYPFMMLSLWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK05777 224 HMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLlVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 291 VSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILA-RGLQTLLPLMAAWWLLASLTNLSL 369
Cdd:PRK05777 303 IAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDfAGLSKRSPLLAAVMTIFMLSLAGI 382
|
170
....*....|....*...
gi 19343526 370 PPTINLIGELFVVVATFS 387
Cdd:PRK05777 383 PPTAGFWGKFYVFEAAVE 400
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-408 |
1.08e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 47.76 E-value: 1.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 95 YITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSL 174
Cdd:MTH00020 113 FMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 175 NFLLMqYWTQPLPNSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAH-----VEAPI-AGSMVLAAVLLKLGGYG------ 242
Cdd:MTH00020 193 DFSSV-FNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMegptpVSALIhAATMVTAGVFLLIRSSPlfeqap 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 243 -MMRITTLLGPLTSFMAypfmmlslwgmimtSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQtpwSYMGATALMIAHGL 321
Cdd:MTH00020 272 lALIIVTIVGSLTVFFA--------------ATVGLVQNDLKKVIAYSTCSQLGYMVVACGLS---HYSISLFHLMNHAF 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 322 TSSLLFCLANSnyeRIHS----RTMILARGLQTLLPLMAAWWLLASLTNLSLPptiNLIG----ELFVVVATFSWSNITI 393
Cdd:MTH00020 335 FKALLFLSAGS---VIHAlsdeQDMRKMGGLISFLPLTYIFFLIGSLSLMGFP---YLTGfyskDLILELAFGQYYLIFA 408
|
330
....*....|....*.
gi 19343526 394 TLMG-TNIIITALYSL 408
Cdd:MTH00020 409 YWLGcFSALLTAFYSI 424
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
23-307 |
1.54e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 47.27 E-value: 1.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 23 IWINTTAYSLLISLvsltyLNQLSDNSLNFSLLFFTDS-----LSAPLLVltTWLLplmLMASQFHLSKETltRKKLYIT 97
Cdd:MTH00208 75 IWILLGCPNINISL-----SNWLSNTLFNFSLSFIFDFyfilfFSVALFV--TWSI---IEFSHYYMSNDP--NKNAFFR 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 98 MLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFL 177
Cdd:MTH00208 143 LLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLN 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 178 LMQYWTQPlpNSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAVLLklggygMMRITTLL 250
Cdd:MTH00208 223 EILSLNNS--NSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSPLI 293
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 19343526 251 GPLTSFMAYPFMMLSLWGmIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPW 307
Cdd:MTH00208 294 SNSPWFLSLCLILGSLTA-LFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPN 349
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
49-295 |
5.95e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 45.59 E-value: 5.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 49 SLNFSLLFFTDSLSAPLLVLTTWLLPLMLMASQFHLS-KETLTRkkLYITMLVLLQLFLIMTFSAMELILFyILFEATLV 127
Cdd:PRK12649 69 SAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMShKEDLPR--YYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSI 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 128 PTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPNSWSSMFLWLACMMAFM--- 204
Cdd:PRK12649 146 TSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaa 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 205 VKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITtllgPLTSFMAYPFMMLSLWGMI---MTSSICLRQT 280
Cdd:PRK12649 226 AKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIH----PIFSGTEAWFILVSGTGMItmvLAGFLAFRQT 300
|
250
....*....|....*
gi 19343526 281 DLKSLIAYSSVSHMA 295
Cdd:PRK12649 301 DIKAILAYSTISQLA 315
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-301 |
8.26e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 44.94 E-value: 8.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 1 MLKIIFPTMMLVPLTWASKPNMIWINTTAYSLLISLV---------SLTYLNQLSDNSLNFSLLFFTDSLSAPLLVLTTW 71
Cdd:MTH00211 11 LILILLLLPLLLPLNNSKLHIKKAVKLSFFISLIPLLifldqgletILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALY 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 72 LLPLMLMASQFHLSKETltRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLF 151
Cdd:MTH00211 91 VTWSILEFSLWYMSSEP--NINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVI 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 152 YTLVGSLPLLVALLHTQNNLGSLNFllmqywTQPLPNSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAhVEAPIAGS--- 228
Cdd:MTH00211 169 YNRIGDIGLLLSMVWLLLNLNSWEI------SQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSall 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 229 ----MVLAAVLL-------KLGGYGMMRITTLLGPLTsfmaypfmmlslwgMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:MTH00211 242 hsstMVVAGVFLlirlsplFQNNQLILGAVLLLGALT--------------MLFGALCALTQNDIKKIVAFSTTSQLGLM 307
|
....
gi 19343526 298 IVAV 301
Cdd:MTH00211 308 MVTL 311
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
99-384 |
1.42e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 43.87 E-value: 1.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 99 LVLLQLFLIMtfSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGL-YFLFYTLVGSLPLL-VALLHTQNNLGSLNF 176
Cdd:MTH00196 1 MVALGILCLI--SSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLkYFVLGALSSGLFLFgCALLCGTTGGLHLSY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 177 LLMQYWTQPLPNSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPiagsMVLAAVLLKLGGYGMMRITTLLGPLTSF 256
Cdd:MTH00196 79 INLVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNI 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 257 maypFMMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFC--LANSNY 334
Cdd:MTH00196 155 ----LLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSiiLALNVY 230
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 19343526 335 ERIhsrtMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVA 384
Cdd:MTH00196 231 KNL----IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLS 276
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-384 |
3.08e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 42.92 E-value: 3.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 137 GNQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPNSwSSMFLWLACMM---AFMVKMPLYGLH 213
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAA-DRALLEAGAALllvVFLIKAAMWPLN 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 214 LWLPKAHVEA--PIAGsmvLAAVLLKLGGYGMMRITTLL-GPLTSFMAYPFMMLSLWGMIMTSSI----CLRQTDLKSLI 286
Cdd:PRK12666 231 FWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLfGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRLRRLA 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 287 AYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLAnsnyERIHSRTMILARGLQTLLPLMAAWWLLASLTN 366
Cdd:PRK12666 308 AYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA----DLVERQRGAAADRLAVTPELYDLDEEEEEEVG 383
|
250
....*....|....*...
gi 19343526 367 LSLPPTINLIGELFVVVA 384
Cdd:PRK12666 384 VAIPATMALLGLLFFICA 401
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
155-327 |
1.11e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 41.43 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 155 VGSLPLLVALLHTQNNLGSLNFLLMQYW--TQPLPNSWSSMfLWLACMMAFMVKMPLYGLHLWLPKAhVEAPIAGSMVLA 232
Cdd:PRK07390 182 VGDLLLLMGVVALSPLAGTLNFSDLAAWaaTANLDPLTATL-LGLALIAGPTGKCAQFPLHLWLDEA-MEGPNPASILRN 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 233 AVLLKLGGYGMMRITTL--LGPLTSFMaypfmMLSLWGM--IMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPws 308
Cdd:PRK07390 260 SVVVATGAWVLIKLQPVlaLSPVALTV-----LIVIGTVtaIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQP-- 332
|
170
....*....|....*....
gi 19343526 309 yMGATALMIAHGLTSSLLF 327
Cdd:PRK07390 333 -DIALLLLLTHAIAKALLF 350
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
155-371 |
2.58e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 40.39 E-value: 2.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 155 VGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPNSwSSMFLWLACMMAFMV------KMPLYGLHLWLPKAhVEAPI--- 225
Cdd:PRK07376 184 VGDFGLLLGILGLFWATGSFDFDGIADRLSELVSS-GAVSGWLALLLCILVflgpmaKSAQFPLHVWLPDA-MEGPTpis 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 226 ----AGSMVLAAVLLKLGGY-------GMMRITTLLGPLTSFMAypfmmlslwgmimtSSICLRQTDLKSLIAYSSVSHM 294
Cdd:PRK07376 262 alihAATMVAAGVFLVARMYpvfeqfpAVMTVIAWTGAITAFLG--------------ASIALTQNDIKKGLAYSTISQL 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 295 ALVIVAVLIQTPWSymGATALMiAHGLTSSLLFCLANS---------NYERIHSRTMILARGLQTLLPLMAAWWLLASLT 365
Cdd:PRK07376 328 GYMVMAMGCGAYSA--GLFHLM-THAYFKAMLFLGSGSvihgmeevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLA 404
|
....*.
gi 19343526 366 NLSLPP 371
Cdd:PRK07376 405 ISGIPP 410
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
155-332 |
3.99e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 39.61 E-value: 3.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 155 VGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLPNSWSSMFLWLACMMAFMVKMPLYGLHLWLPKAH-----VEAPI-AGS 228
Cdd:MTH00210 173 VGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMegptpVSALIhAAT 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 229 MVLAAVLLKL-------GGYGMMRITTLLGPLTSFMAypfmmlslwgmimtSSICLRQTDLKSLIAYSSVSHMALVIVAV 301
Cdd:MTH00210 253 MVTAGVFLIIrsgplfeGSPLALTIVTILGALTAFFA--------------ATVGVVQNDLKKVIAYSTCSQLGYMVMVC 318
|
170 180 190
....*....|....*....|....*....|.
gi 19343526 302 LIQtpwSYMGATALMIAHGLTSSLLFCLANS 332
Cdd:MTH00210 319 GIS---NYSTSLFHLMNHAFFKALLFLSAGS 346
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
262-371 |
5.40e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 39.24 E-value: 5.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 262 MMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRT 341
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110
....*....|....*....|....*....|
gi 19343526 342 MILARGLQTLLPLMAAWWLLASLTNLSLPP 371
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
201-403 |
5.67e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.00 E-value: 5.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 201 MAFMVKMPLYGLHL--WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGPL-TSFMAYPFMMLSLWGMIMTSSICL 277
Cdd:PRK06459 166 FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIpIGYFGLTILAIGAFSILFGALYAY 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 278 RQTDLKSLIAYSSVSHMALVIVAV--------LIQTPWSYMGATALM--IAHGLTSSLLFCLANSnyerIHSRTMILARG 347
Cdd:PRK06459 246 VSENVKGLLAFSTIENNGAILVALglymvtkqLITSIEHFSLITVILysFAHSVAKTGLFLSSGL----QEKQSITYSKK 321
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 19343526 348 LQTLLPLMAAWWLLASLTnlSLPPTINLIGELFVVVATFSWSNITITLMGTNIIIT 403
Cdd:PRK06459 322 IRNRWIELGLTLLASSLS--GLLPNIGGVASWLLLESLFMFAYVLHNVISILFIVT 375
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
192-409 |
8.79e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 37.94 E-value: 8.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 192 SMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGMMrittLLGPLTSFMAYPFMMLSLWGMIM 271
Cdd:MTH00144 83 SWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLL----SNFLDLYWLAYLLCVISVLSALV 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19343526 272 TSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMgatALMIAHGLTSSLLFCLANSNyerihsrTMILARGLQTL 351
Cdd:MTH00144 158 GSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWM---YFLIYIVSSGFLFFSLWSGD-------SGSMKDLGSLK 227
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 19343526 352 LPLMAAWWLLASLTNLS-LPPTINLIGELFVVVATFSWSNITITLMgtnIIITALYSLY 409
Cdd:MTH00144 228 PSYKTGLSIISLLLSLGgLPPFLGFCSKLLVLISSMESSPLLLILL---LLLGSLISLF 283
|
|
| |
