|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-498 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 938.93 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDLFEIFNNLILNNRVNLLFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 80
Cdd:CHL00025 201 GSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 81 LPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGS 160
Cdd:CHL00025 281 LPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGS 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 161 GSIIHSMEAIVGYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAG 240
Cdd:CHL00025 361 GSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAG 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 241 LTAFYMFRIYLLTFEGHLNTYFINYSGKKSSSFYSISLWGKEEDKKLNRNFglvPLLTMNNTKRASFFGNKTYKISNNVR 320
Cdd:CHL00025 441 LTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWGKEESKKINKLL---LLLTMNNNERVSFFSKKTYKIDGNVR 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 321 NKTFITVENFGlNTRTFYYPNESDNTILFPMLVLLLFTLFIGAIGIPFNQEGIDFDILSKLLTPSINLLHTNSENFVDWY 400
Cdd:CHL00025 518 NMIRSFITIFG-NKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHQNSNNSVDWY 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 401 EFLKNAIFSVSIALFGIFIAYCLYKPFYSSKLNLTLLNSFQKWSSKRIRWEKLINFVYNWSYNRGYIDAFFKKSLIESIR 480
Cdd:CHL00025 597 EFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKGGPKRIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIR 676
|
490
....*....|....*...
gi 193162924 481 KLAKQTNFFD*R**DGIT 498
Cdd:CHL00025 677 GLAELTHFFDRRVIDGIT 694
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-497 |
4.78e-142 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 423.67 E-value: 4.78e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDLFEIFNNLILNNRVNLLFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 80
Cdd:PRK07376 201 GSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARM 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 81 LPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGS 160
Cdd:PRK07376 281 YPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGS 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 161 GSIIHSMEAIVGYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAG 240
Cdd:PRK07376 361 GSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAG 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 241 LTAFYMFRIYLLTFEGhlntyfiNYSGkksssfysislwgkeEDKKLNRNfglvplLTMNNTKRASFFGNKTYKISNNVR 320
Cdd:PRK07376 441 MTAFYMFRMYFLTFEG-------EFRG---------------NDKELQKE------LLAAADAPGHHEGHHEEHGEHHHH 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 321 NKTfitvenfglntrtfyyPNESDNTILFPMLVLLLFTLFIGAIGIPFNQEGIDFdilskLLTPSINLLHtnSENFvDWY 400
Cdd:PRK07376 493 SGS----------------PHESPWTMTLPLVVLAVPSVLIGLLGTPWNNRFEAF-----LHAPGEALEA--AAHF-EWG 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 401 EFLKNAIFSVSIALFGIFIAYCLYkpfYSSKLNL-TLLNSFQKwsskrirweklinfVYNWSYNRGYIDAFFKKSLIESI 479
Cdd:PRK07376 549 EFLILAGASVGIALIGITLASLMY---LLKKIDPaAIAERFPP--------------LYQFSLNKWYLDDIYEKLFVKGS 611
|
490
....*....|....*...
gi 193162924 480 RKLAKQTNFFD*R**DGI 497
Cdd:PRK07376 612 RRLARQVLEVDYKVVDGV 629
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
248-490 |
1.99e-137 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 396.21 E-value: 1.99e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 248 RIYLLTFEGHLNTYFINYSGKKSSSFYSISLWGKEEDKKLNRNFGLVPLLTMNNTKRASFFGNKTYKISNNVRNKT--FI 325
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTLLLLTMNNNEKVSFFSKKTYRIDGNVRNMTrpFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 326 TVENFGlNTRTFYYPNESDNTILFPMLVLLLFTLFIGAIGIPFNQEGIDFDILSKLLTPSINLLHTNSENFVDWYEFLKN 405
Cdd:pfam01010 81 TITHFD-NKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFVTN 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 406 AIFSVSIALFGIFIAYCLYKPFYSSKLNLTLLNSFQKWSSKRIRWEKLINFVYNWSYNRGYIDAFFKKSLIESIRKLAKQ 485
Cdd:pfam01010 160 AIFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAEL 239
|
....*
gi 193162924 486 TNFFD 490
Cdd:pfam01010 240 THFFD 244
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-497 |
6.42e-112 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 343.67 E-value: 6.42e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDLFEIFNNLIlnnrvNLLFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 80
Cdd:COG1009 190 GTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARL 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 81 LPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGS 160
Cdd:COG1009 265 SPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGA 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 161 GSIIHSMEaivgyspdkSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILN---DSLLFSPIFAIIACS 237
Cdd:COG1009 345 GSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaalEAGGLGPLLLAVALL 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 238 TAGLTAFYMFRIYLLTFeghlntyfinysgkksssfysislWGKEEDKKLNRnfglvplltmnntkrasffgnktykisn 317
Cdd:COG1009 416 GAFLTAFYSFRLFFLVF------------------------FGKPRPKTPKH---------------------------- 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 318 nvrnktfitvenfglntrtfyyPNESDNTILFPMLVLLLFTLFIGAIGIPFNQEGIDfdiLSKLLTPSINLLHTNSENFV 397
Cdd:COG1009 444 ----------------------PHESPWLMTLPLVVLAVLSLVLGLLLPGLLEGLLA---PAAVLGGELHLAHGLLLNAL 498
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 398 dwyeflknaifSVSIALFGIFIAYCLYkpfyssklnltllnsfqkWSSKRIRWEKLINFVYNWSYNRGYIDAFFKKSLIE 477
Cdd:COG1009 499 -----------PLLLSLLGIALGYLLY------------------LKRPLPALAERLKPLYRLLANKWYFDELYDALFVK 549
|
490 500
....*....|....*....|
gi 193162924 478 SIRKLAKqTNFFD*R**DGI 497
Cdd:COG1009 550 PVRALAR-FLWFDRYVIDGI 568
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-497 |
1.23e-110 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 340.98 E-value: 1.23e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQdlfEIFNNLILNNRVNLLFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 80
Cdd:PRK06590 194 GSLNYD---EVFAAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARM 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 81 LPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGS 160
Cdd:PRK06590 271 SPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGA 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 161 GSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFA-IIACSTA 239
Cdd:PRK06590 351 GSVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGA 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 240 GLTAFYMFRIYLLTFeghlntyfinysgkksssfysislwgkeedkklnrnfglvplltmnntkrasffgnktykisnnv 319
Cdd:PRK06590 423 FLTAFYSFRLIFLVF----------------------------------------------------------------- 437
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 320 rnktfitvenFGLNTRTFYYPNESDNTILFPMLVLLLFTLFIGAIGIPFnqegidfdiLSKLLTPSINLLHTNSEnfvdW 399
Cdd:PRK06590 438 ----------HGKEKEKIHHPHESPAVMTLPLIVLAVLSVFAGALIVPP---------FLGVLPLTTELAHGEAE----H 494
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 400 YEFLKNAIFSVSIALFGIFIAYCLYKpfyssklnltllnsFQKWSSKriRWEKLINFVYNWSYNRGYIDAFFKKSLIESI 479
Cdd:PRK06590 495 HLPVWVALLPLVVALAGIALAWLLYL--------------KKPTLPT--SIAAPGRFLYTLLRNKYYFDELYEKVFVKPG 558
|
490
....*....|....*...
gi 193162924 480 RKLAKqtnFFD*R**DGI 497
Cdd:PRK06590 559 LALAR---LLWKDGDDGI 573
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
1-484 |
2.45e-95 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 300.74 E-value: 2.45e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDLFEIFNNLILNnrvnllFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 80
Cdd:TIGR01974 193 GTLNFQEVFALAPGAFFS------ALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVART 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 81 LPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGS 160
Cdd:TIGR01974 267 SPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGA 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 161 GSIIHSMEaivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSL--LFSPIFAIIACST 238
Cdd:TIGR01974 347 GSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIG 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 239 AGLTAFYMFRIYLLTFEGhlntyfinysgkksssfysislwgkeedkklnrnfglvplltmnnTKRASFFGNktykisnn 318
Cdd:TIGR01974 419 AFLTAFYSFRLIFMVFHG---------------------------------------------KERHEADAH-------- 445
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 319 vrnktfitvenfglntrtfyyPNESDNTILFPMLVLLLFTLFIGAIGIPFnqegidFDILSklltPSINLLHTNSENFVD 398
Cdd:TIGR01974 446 ---------------------PHESPLVMLLPLIVLAVGSVFAGFFIVPL------FEFLK----GVLPTSAEPALEHHH 494
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 399 WYEFLKNAIFSVSIAlfGIFIAYCLYkpfyssKLNLTLLNSFqkwsskrirwEKLINFVYNWSYNRGYIDAFFKKSLIES 478
Cdd:TIGR01974 495 VPALEIWSPTAVAIL--GILLAYLLY------LGNPTLPAKI----------AQRHSGLYRLLLNKWYFDELYDKVFVKP 556
|
....*.
gi 193162924 479 IRKLAK 484
Cdd:TIGR01974 557 YLFLGK 562
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
1-254 |
4.28e-69 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 231.89 E-value: 4.28e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDLFeifnNLILNNRVNLLFLSLcaFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 80
Cdd:MTH00020 190 GSLDFSSVF----NMVVSAPSSDITLIC--LFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRS 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 81 LPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGS 160
Cdd:MTH00020 264 SPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSA 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 161 GSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLL-FSPIFAI-IACST 238
Cdd:MTH00020 344 GSVIHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFS 415
|
250
....*....|....*.
gi 193162924 239 AGLTAFYMFRIYLLTF 254
Cdd:MTH00020 416 ALLTAFYSIRLIYLTF 431
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
1-274 |
3.62e-66 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 224.50 E-value: 3.62e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDLFEIFNNLILNNRVNLLflslcAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 80
Cdd:MTH00210 190 GTLEFSTISSLLVTNINKESLTII-----CLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRS 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 81 LPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGS 160
Cdd:MTH00210 265 GPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSA 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 161 GSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILndSLLFSPIFAIIA----C 236
Cdd:MTH00210 345 GSVIHAV--------SDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLIL--ELTYDKYYIAFAywlgS 414
|
250 260 270
....*....|....*....|....*....|....*...
gi 193162924 237 STAGLTAFYMFRIYLLTFEGHLNTYFINYSGKKSSSFY 274
Cdd:MTH00210 415 FSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHESSWN 452
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
1-240 |
8.43e-62 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 203.70 E-value: 8.43e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDLFEIFNNLILNNRVNLLFLslcafLLFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVAR 79
Cdd:pfam00361 61 GTLSFDELSKALTGGLNSSGLLLLFL-----LILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIR 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 80 LLPLF-IVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKAL 155
Cdd:pfam00361 135 RSLLYlPSSPFIQQILLILAIISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 156 LFLGSGSIIHSMEaivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIA 235
Cdd:pfam00361 215 LFLCAGSVIYRRV--------HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLA 286
|
....*
gi 193162924 236 CSTAG 240
Cdd:pfam00361 287 GVVGS 291
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
10-257 |
2.73e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 205.57 E-value: 2.73e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 10 EIFNNLILNNRVNLLFlslcaFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPS 89
Cdd:MTH00211 192 EISQLFILNLDLTLFL-----LGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQL 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 90 IMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMea 169
Cdd:MTH00211 267 ILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGL-- 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 170 ivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL---NDSLL--FSPIFAIIAcstAGLTAF 244
Cdd:MTH00211 345 ------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILesmNGSYLnaWALLLTLLA---TSLTAA 415
|
250
....*....|...
gi 193162924 245 YMFRIYLLTFEGH 257
Cdd:MTH00211 416 YSFRLIFLSLGGY 428
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
13-254 |
2.89e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 203.28 E-value: 2.89e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 13 NNLILNNRVNLLFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMY 92
Cdd:MTH00208 222 NEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLS 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 93 IISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivg 172
Cdd:MTH00208 302 LCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSL----- 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 173 yspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL-----NDSLLFSPIFAIIACStagLTAFYMF 247
Cdd:MTH00208 377 ---NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSIILALIATL---LTAVYSF 450
|
....*..
gi 193162924 248 RIYLLTF 254
Cdd:MTH00208 451 RIIFFCF 457
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
40-257 |
4.28e-57 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 199.62 E-value: 4.28e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 40 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGL 119
Cdd:MTH00004 222 KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKII 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 120 AYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFL 199
Cdd:MTH00004 302 AFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPITSSCLT 373
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 193162924 200 VGTLSLCGIPPLACFWSKD---EILNDSLLFSPIFAIIACSTAgLTAFYMFRIYLLTFEGH 257
Cdd:MTH00004 374 IGNLALMGTPFLSGFYSKDtiiETLNTSYLNAWALLLTLLATS-FTAAYSLRMILLVQTGF 433
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-264 |
7.48e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 190.89 E-value: 7.48e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDLFEIFNNLILNnrvnLLFLSLCAfllfvgpIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 80
Cdd:MTH00066 192 NSWELQQIFLLNDNSTLP----LLGLILAA-------AGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRF 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 81 LPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGS 160
Cdd:MTH00066 261 HPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCS 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 161 GSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEI---LNDSLL--FSPIFAIIA 235
Cdd:MTH00066 341 GSIIHSL--------NDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIieaMNTSNLnsWALILTLIA 412
|
250 260 270
....*....|....*....|....*....|..
gi 193162924 236 CStagLTAFYMFRIY---LLTFEGHLNTYFIN 264
Cdd:MTH00066 413 TS---FTAVYSFRIIyfsSMKFPRSLPLSPIN 441
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
32-221 |
2.84e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 190.55 E-value: 2.84e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 32 LLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALA 111
Cdd:MTH00032 230 LLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLV 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 112 QKDIKRGLAYSTMSQLGYMMLALGM-GSYRSALFHLITHAYSKALLFLGSGSIIHSMEAivgyspdKSQNMILMGGLTKH 190
Cdd:MTH00032 310 QNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-------DEQDMRKMGGLIHS 382
|
170 180 190
....*....|....*....|....*....|.
gi 193162924 191 VPITKTAFLVGTLSLCGIPPLACFWSKDEIL 221
Cdd:MTH00032 383 IPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
25-274 |
2.39e-52 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 186.20 E-value: 2.39e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 25 FLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLL 104
Cdd:MTH00151 174 LSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTLLM 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 105 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILM 184
Cdd:MTH00151 254 AGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSS--------SGTQDIRLL 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 185 GGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILnDSLLFSPI----FAIIACSTaGLTAFYMFRIYLLTFEGHLNT 260
Cdd:MTH00151 326 GSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLIL-ESSLMSPTsllmVLLMFVGV-GLTALYSARLSFCLVWGSMKS 403
|
250
....*....|....
gi 193162924 261 YFinYSGKKSSSFY 274
Cdd:MTH00151 404 SS--LSSKSDEDFY 415
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
40-249 |
1.37e-51 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 185.04 E-value: 1.37e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 40 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGL 119
Cdd:MTH00137 228 KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIV 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 120 AYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFL 199
Cdd:MTH00137 308 AFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSSCLT 379
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 193162924 200 VGTLSLCGIPPLACFWSKDEI---LNDSLL--FSPIFAIIACStagLTAFYMFRI 249
Cdd:MTH00137 380 IGSLALTGTPFLAGFFSKDAIieaLNTSHLnaWALTLTLIATS---FTAVYSLRV 431
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
2-257 |
2.25e-51 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 184.29 E-value: 2.25e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 2 SFEFQDLFEIFNNlilNNRVNLLFLSLCAfllfvgpIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 81
Cdd:MTH00108 195 SWDLQQIFMLNPN---NSNLPLMGLLLAA-------TGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFH 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 82 PLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSG 161
Cdd:MTH00108 265 PLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSG 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 162 SIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKD---EILNDS------LLFSpifa 232
Cdd:MTH00108 345 SIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDliiEAANTSytnawaLLIT---- 412
|
250 260
....*....|....*....|....*
gi 193162924 233 IIACStagLTAFYMFRIYLLTFEGH 257
Cdd:MTH00108 413 LIATS---LTAAYSTRIIFFALLGQ 434
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-250 |
4.14e-51 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 179.57 E-value: 4.14e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDLFEIFNNLilnnrvNLLFLSLCAFLLFVGPIAKSAQFPLHVWLPDAM-EGPTPISALIHAAtMVAAGIFLVAR 79
Cdd:COG0651 185 GTLNMADLAARLAEL------DPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYpAAPSPVSALLSGL-LTKVGVYAILR 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 80 LLPLFI---VIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSK 153
Cdd:COG0651 258 VLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGlagALFHLLNHALAK 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 154 ALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILnDSLLFS--PIF 231
Cdd:COG0651 338 ALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLL-QAALEAgaWLL 407
|
250
....*....|....*....
gi 193162924 232 AIIACSTAGLTAFYMFRIY 250
Cdd:COG0651 408 AAVLLLSSLLTLAYFVRIF 426
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
1-256 |
1.72e-47 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 173.56 E-value: 1.72e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDLFEIFNNLILN-NRVNLLFLSLCAfllfvGPIAKSAQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVAR 79
Cdd:PRK07390 199 GTLNFSDLAAWAATANLDpLTATLLGLALIA-----GPTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIK 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 80 LLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLG 159
Cdd:PRK07390 273 LQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMS 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 160 SGSIIHSmeaivgyspDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTA 239
Cdd:PRK07390 353 VGSIILT---------TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVN 423
|
250
....*....|....*..
gi 193162924 240 GLTAFYMFRIYLLTFEG 256
Cdd:PRK07390 424 ALTAFNLTRVFRLVFLG 440
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
40-251 |
4.97e-46 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 168.79 E-value: 4.97e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 40 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGL 119
Cdd:MTH00207 192 KSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKII 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 120 AYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdKSQNMILMGGLTKHVPITKTAFL 199
Cdd:MTH00207 272 ALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLL 343
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 193162924 200 VGTLSLCGIPPLACFWSKDEILNDSLLF---SPIFAIIACSTaGLTAFYMFRIYL 251
Cdd:MTH00207 344 IANLALCGSPFLSGFYSKDLILESSLFYphnSLMILMIFLAT-ALTAAYSTRFTL 397
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
17-274 |
5.63e-46 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 168.78 E-value: 5.63e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 17 LNNRVNLLFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIvIPSIMYIISL 96
Cdd:MTH00165 170 LDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLF-SSFFSKFLLL 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 97 IGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspD 176
Cdd:MTH00165 249 ISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNM--------S 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 177 KSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL-----NDSLLFSPIFAIIACstaGLTAFYMFRIYL 251
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILemvsmSNLNFFIFFLFFFST---GLTVSYSFRLIY 397
|
250 260
....*....|....*....|...
gi 193162924 252 LTFEGHLNTYFINYSGKKSSSFY 274
Cdd:MTH00165 398 YSMSGDFNLKSLNNLSDESKFML 420
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
22-271 |
3.11e-45 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 166.74 E-value: 3.11e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 22 NLLFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIIT 101
Cdd:MTH00209 170 NSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLT 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 102 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdKSQNM 181
Cdd:MTH00209 250 TLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHG--------HSQDI 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 182 ILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLL--FSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLN 259
Cdd:MTH00209 322 RMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLEsnMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNS 401
|
250
....*....|..
gi 193162924 260 TYFINYSGKKSS 271
Cdd:MTH00209 402 SKSLNSSFDQNK 413
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-252 |
7.92e-45 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 167.79 E-value: 7.92e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDLFEiFNNLILNNRVNLLFLslcaFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 80
Cdd:PRK12647 174 GTYSLSELLA-SGDVIREHPLYLAIL----LLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARL 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 81 LPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLF 157
Cdd:PRK12647 249 NPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALF 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 158 LGSGSIIHSmeaiVGyspdkSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILnDSLLFSPIFAIIACS 237
Cdd:PRK12647 329 MVAGIIDHE----TG-----TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIY-EALLEAPLWSLILTV 398
|
250
....*....|....*
gi 193162924 238 TAGLTAFYMFRIYLL 252
Cdd:PRK12647 399 AAVLGNALMVAVAFL 413
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
32-257 |
6.19e-44 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 165.48 E-value: 6.19e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 32 LLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALA 111
Cdd:PRK12645 215 LILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVK 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 112 QKDIKRGLAYSTMSQLGYMMLALGMGS----------------YRSALFHLITHAYSKALLFLGSGSIIHSmeaiVGysp 175
Cdd:PRK12645 295 QTDLKGILAFSTVSQLGLIMSLLGIGAaslhyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHE----TG--- 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 176 dkSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSL------LFS--------PIFAIIAcstAGL 241
Cdd:PRK12645 368 --TRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMLnateanLFSldtwgvlfPVIAWVA---SVF 442
|
250
....*....|....*.
gi 193162924 242 TAFYMFRIYLLTFEGH 257
Cdd:PRK12645 443 TFVYSIIFIFKTFFGK 458
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
32-234 |
1.47e-43 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 160.52 E-value: 1.47e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 32 LLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP-SIMYIISLIGIITVLLGATLAL 110
Cdd:PRK06525 212 GILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPhVIGYVGAVMAIVTLLYGFLMYL 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 111 AQKDIKRGLAYSTMSQLGYMMLALGMGSYRS------ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILM 184
Cdd:PRK06525 292 PQQDMKRLLAYSTITQLGYMFFGLSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRL 362
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 193162924 185 GGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAII 234
Cdd:PRK06525 363 RGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
32-235 |
2.00e-43 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 164.59 E-value: 2.00e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 32 LLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALA 111
Cdd:PRK12648 212 LILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALF 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 112 QKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMILMGGLT 188
Cdd:PRK12648 292 QHDLKGLLAYSTISHLGLITLLLGLGSPLAavaAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLR 362
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 193162924 189 KHVPITKTAFLVGTLSLCGIPPLACFWSK----DEILNDSLLFS-----PIFAIIA 235
Cdd:PRK12648 363 RLMPITATLAMVAAAAMAGVPLLNGFLSKemffAETLDTHLLGSldwllPVAATLA 418
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
26-256 |
5.91e-42 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 156.67 E-value: 5.91e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 26 LSLCAFLLfvgpiaKSAQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFIVIPS--------IMYIISL 96
Cdd:PRK12667 228 LALWAFTI------KAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPslidfraaLSPILII 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 97 IGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMeaivgy 173
Cdd:PRK12667 301 LGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA------ 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 174 spdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKdEILNDSLLFS--PIFAIIACSTAGLTAFYMFRIYL 251
Cdd:PRK12667 375 ---GTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWY 450
|
....*
gi 193162924 252 LTFEG 256
Cdd:PRK12667 451 SLFFG 455
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
32-256 |
3.29e-41 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 157.70 E-value: 3.29e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 32 LLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALA 111
Cdd:TIGR00940 211 LVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIF 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 112 QKDIKRGLAYSTMSQLGYMMLALGMGS----------------YRSALFHLITHAYSKALLFLGSGSIIHSmeaivgysp 175
Cdd:TIGR00940 291 QQDLKGILAFSTISQLGLIMVLLGLGSpsyhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE--------- 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 176 DKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILN-----------DSLLFSPIFAIIACSTAGLTAF 244
Cdd:TIGR00940 362 TGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAeaitahlvnpfDTVTLGYLFPYVATVASVFTFV 441
|
250
....*....|..
gi 193162924 245 YMFRIYLLTFEG 256
Cdd:TIGR00940 442 YSLRFIHGVFFG 453
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
31-260 |
4.78e-41 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 157.22 E-value: 4.78e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 31 FLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLAL 110
Cdd:PRK12646 214 FMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITAL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 111 AQKDIKRGLAYSTMSQLGYMMLALGMG-----------------SYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgy 173
Cdd:PRK12646 294 KQWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEA------ 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 174 spdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKD----------EILNDSLLFSPIFAIIACSTAGLTA 243
Cdd:PRK12646 368 ---GTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTF 444
|
250
....*....|....*..
gi 193162924 244 FYMFRIYLLTFEGHLNT 260
Cdd:PRK12646 445 TYALYMVKEVFWGKYDS 461
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
32-249 |
6.66e-41 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 153.11 E-value: 6.66e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 32 LLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL-----PLFIVIPSIMYIISLIGIITVLLGA 106
Cdd:PRK08375 207 FVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGS 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 107 TLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMIL 183
Cdd:PRK08375 287 LAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAI----EVTYG-----TRRLSE 357
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 193162924 184 MGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL---NDSLLFSPIFAIIACSTagLTAFYMFRI 249
Cdd:PRK08375 358 LSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVvgaVEAGQWLVLAVLLASSL--LALLYFLRI 424
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
16-248 |
1.57e-40 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 156.24 E-value: 1.57e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 16 ILNNRVNLLFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIIS 95
Cdd:PRK12644 192 LLADPPTGPAVSVAVVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVL 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 96 LIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHL---ITHAYSKALLFLGSGSIIHSmeaiVG 172
Cdd:PRK12644 272 VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TG 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 173 yspdkSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSK----DEILNDSLLFSPIFAIIACSTAG--LTAFYM 246
Cdd:PRK12644 348 -----TRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGIVLGsiLTVAYS 422
|
..
gi 193162924 247 FR 248
Cdd:PRK12644 423 LR 424
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
25-247 |
2.32e-40 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 155.59 E-value: 2.32e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 25 FLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLL 104
Cdd:PRK12650 206 LTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALM 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 105 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNM 181
Cdd:PRK12650 286 GAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDH--QA-------GTRDI 356
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 193162924 182 ILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILnDSLLFSPIFA---IIACSTAGLTAFYMF 247
Cdd:PRK12650 357 RRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGML-TAFLEAPGGNagvVLLLVGAALGAVFTF 424
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-252 |
2.59e-39 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 151.91 E-value: 2.59e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDLFEifNNLILNNRVNLLFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 80
Cdd:PRK12649 190 GTYDIATILQ--DSELIENIKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARI 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 81 LPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR-------SALFHLITHAYSK 153
Cdd:PRK12649 268 HPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFK 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 154 ALLFLGSGSIIHsmEAivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSL----LFSP 229
Cdd:PRK12649 348 ACLFLVAGIVAH--EA-------ATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSVemgaLIGG 418
|
250 260
....*....|....*....|....*
gi 193162924 230 IFAII--ACSTAGLTAFYMFRIYLL 252
Cdd:PRK12649 419 PFTIIipAVAVLGGVFTFAYSIKLI 443
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
28-259 |
9.18e-37 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 141.76 E-value: 9.18e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 28 LCAFLLFVGPIAKSAQFPLHVWLPDA-MEGPTPISAlIHAATMVAAGIFLVARL-LPLFiviP----SIMYIISLIGIIT 101
Cdd:COG1008 210 LLFLAFFIAFAVKVPMFPFHTWLPDAhVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIG 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 102 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKS 178
Cdd:COG1008 286 IIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRT---------HT 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 179 QNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEGHL 258
Cdd:COG1008 357 RDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPL 436
|
.
gi 193162924 259 N 259
Cdd:COG1008 437 K 437
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
22-256 |
1.57e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 138.69 E-value: 1.57e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 22 NLLFLSLCAFLLFVGPIA-KSAQFPLHVWLPDAM-EGPTPISALIHAATmvAAGIFLVAR-LLPLF---IVIPSIMYIIS 95
Cdd:PRK08376 214 NPTVVAKIALALFIAGLAmKSGAVPVHMWLPDAYpAAPSSISAMLLVIK--QAGLYALARvLFSIYgpaINLATVGWVII 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 96 LIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG--SYRS-------------ALFHLITHAYSKALLFLGS 160
Cdd:PRK08376 292 ILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGVGlaALGDpamasygeialagGIYHIVNHALYKALLFLTA 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 161 GSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAG 240
Cdd:PRK08376 372 GAVIYET---------GTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSV 442
|
250
....*....|....*.
gi 193162924 241 LTAFYMFRIYLLTFEG 256
Cdd:PRK08376 443 LTLASFVKVFHTAFFG 458
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
30-256 |
1.67e-33 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 134.25 E-value: 1.67e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 30 AFLL-FVGPIAKSAQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFIVIPSIM--YIISLIGIITVLLG 105
Cdd:PRK06521 212 VFLLaLFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWwgVLVLALGAISAVLG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 106 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKALLFLGSGSIIHSMEaiv 171
Cdd:PRK06521 291 VLYALAEHDLKRLLAYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG--- 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 172 gyspdkSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNdSLLFS------------PIFAIIACSTA 239
Cdd:PRK06521 368 ------TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQ-SLLSSpglpqwglklavPIAAAMLALTA 440
|
250
....*....|....*..
gi 193162924 240 GLTAFYMFRIYLLTFEG 256
Cdd:PRK06521 441 ALAAMCFVKFYGITFLG 457
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
1-217 |
1.44e-30 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 125.11 E-value: 1.44e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDLFEIFNNLILNNRVNLLFLSLCAFllfvgPIAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLV 77
Cdd:PRK08668 175 GTFDFADISQGLINDTSTGFALIVFLFLLAF-----GVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLV 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 78 ARLLP---------LFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFH 145
Cdd:PRK08668 250 LYVLPgtklfsefgTYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFH 329
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 193162924 146 LITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSK 217
Cdd:PRK08668 330 VFNHALFKGLFFLIFAAVIYRT---------GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-249 |
9.88e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 121.85 E-value: 9.88e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 27 SLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLpLFIVIPSIMYII-------SLIGI 99
Cdd:PRK06589 210 SIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKIL-LYIFGLSYLQRIfaefnwlIFIPI 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 100 ITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM---GSYRSALFHLITHAYSKALLFLGSGSIihsmeaivgYSPD 176
Cdd:PRK06589 289 VSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLK 359
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 193162924 177 KSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL-----NDSLLFSPIFAIIACSTAGLTAFYMFRI 249
Cdd:PRK06589 360 KEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
32-221 |
1.68e-28 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 118.33 E-value: 1.68e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 32 LLFVGPIAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFIVIP---SIMYIISLIGIITVLLGAT 107
Cdd:PRK08377 211 LLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLKLVIIMATLTVFFAEL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 108 LALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILM 184
Cdd:PRK08377 290 SALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKF 360
|
170 180 190
....*....|....*....|....*....|....*..
gi 193162924 185 GGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL 221
Cdd:PRK08377 361 EGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII 397
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
7-249 |
5.43e-28 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 116.37 E-value: 5.43e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 7 DLFEIFNNLILNNRVNLLFLslCAFLLFVGPIA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--P 82
Cdd:COG1007 184 NLAGIAAALAAGGANSPLLL--LGLVLVLAGLAfKLSAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveA 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 83 LFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLg 159
Cdd:COG1007 261 FPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA- 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 160 sgsIIhsmeAIVGYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSK----DEILNDSLLFspiFAIIA 235
Cdd:COG1007 340 ---VI----LLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKfyvfSAAVEAGLYW---LAVIA 409
|
250
....*....|....
gi 193162924 236 CSTAGLTAFYMFRI 249
Cdd:COG1007 410 VLNSVISAYYYLRV 423
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-249 |
1.75e-26 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 111.84 E-value: 1.75e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDlfeIFNNLILNNRVNLLFLSLCAFLLfVGPIAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVAR 79
Cdd:PRK05777 182 GSLSFAG---IAKALADGSGNSLLLLFGLVFLL-VGLAFKLSAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLR 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 80 LLPLFI--VIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKa 154
Cdd:PRK05777 257 LLVVAFggLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT- 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 155 llfLGSGSIIHSMEAIVGYSPDKSQnmilMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIF-AI 233
Cdd:PRK05777 336 ---LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWlAV 408
|
250
....*....|....*.
gi 193162924 234 IACSTAGLTAFYMFRI 249
Cdd:PRK05777 409 IGVLNSAIGAFYYLRV 424
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
23-164 |
2.64e-26 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 111.71 E-value: 2.64e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 23 LLFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITV 102
Cdd:PRK08168 196 SPSLQAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATA 274
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 193162924 103 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSII 164
Cdd:PRK08168 275 VLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
31-256 |
3.48e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 111.20 E-value: 3.48e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 31 FLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLplfIVIPSIMYIISLIGIITVLLGATLAL 110
Cdd:PRK07234 188 ALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA---LDVPGLDLIVRIFGVGTALLGVLFAL 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 111 AQKDIKRGLAYSTMSQLGYMMLALGMGsyrsALFHLiTHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMILMGGLTKH 190
Cdd:PRK07234 265 LEKDLKRMLAFSTISQLGFILAAPLVG----GLYAL-AHGLVKSTLFLCAGAL---------PSRNFTELISQMLGIGKW 330
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 193162924 191 VPITktaflVGTLSLCGIPPLACFWSKDEILNDSLlfsPIFAIIACSTAGLTAFYMFRIYLLTFEG 256
Cdd:PRK07234 331 IPLT-----MASFSIAGFPLLAGFVSKVLTLKNLL---PWQAIALNLAAVGTAASFWKFIFLPFSA 388
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-259 |
6.08e-26 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 110.68 E-value: 6.08e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDLFeifnNLILNNRV-NLLFLSLcafllFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF-LVA 78
Cdd:PRK05846 193 GTFDIADLL----NLPLPPGVqYWLFLAF-----FIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLR 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 79 RLLPLFIVIPSIM-YIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKA 154
Cdd:PRK05846 264 FSLPLFPDASHEFaPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSA 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 155 LLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAII 234
Cdd:PRK05846 344 ALFLLVGVLYDRL---------HTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFI 414
|
250 260
....*....|....*....|....*
gi 193162924 235 ACSTAGLTAFYMFRIYLLTFEGHLN 259
Cdd:PRK05846 415 ATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
23-278 |
1.09e-25 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 110.01 E-value: 1.09e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 23 LLFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIpSIMYIISLIGIITV 102
Cdd:MTH00095 160 SFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTM 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 103 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAivgyspdkSQNMI 182
Cdd:MTH00095 239 FFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFG--------QQDGR 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 183 LMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLL--FSPIFAIIACSTAGLTAFYMFRIYLLTFeghLNT 260
Cdd:MTH00095 311 NYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFF---LSF 387
|
250
....*....|....*...
gi 193162924 261 YFINYSGKKSSSFYSISL 278
Cdd:MTH00095 388 SKVVNVYSSSVLMNFLSL 405
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
12-256 |
6.20e-25 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 107.33 E-value: 6.20e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 12 FNNLILNNRVNLLFLSLCAFLLFVGPIA-KSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFLVARLLPLFiviP- 88
Cdd:TIGR01972 187 FDLLELLNLPLPFGVQTWLFLAFFIAFAvKVPLFPLHTWLPDAHvEAPTAGSVILAGVLLKMGTYGFLRFNLPLF---Pd 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 89 ---SIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGS 162
Cdd:TIGR01972 264 aslYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGisgAVFQMISHGLITAALFLLVGV 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 163 IihsmeaivgYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLT 242
Cdd:TIGR01972 344 L---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLA 414
|
250
....*....|....
gi 193162924 243 AFYMFRIYLLTFEG 256
Cdd:TIGR01972 415 AAYMLTLYKRVFFG 428
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
32-187 |
4.36e-24 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 105.12 E-value: 4.36e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 32 LLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFI-VIPSImyIISLIGIITVLLGATLAL 110
Cdd:PRK08601 209 LLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQI--LLLIFASISVLIGTGISL 285
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 193162924 111 AQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMILMGGL 187
Cdd:PRK08601 286 VQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFNIVKQANEKKSYLWIVVGRV 362
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
30-216 |
6.30e-24 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 104.63 E-value: 6.30e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 30 AF-LLFVGPIAKSAQFPLHVWLPDA-MEGPTPISALihaatmvaagifLVARLLP--LFIVI--------------PSIM 91
Cdd:PRK06458 216 AFvFLLIGFGTKVGLFPMHAWLPDAhSEAPSPVSAL------------LSGVLLNvaLYAVLryyilidaaigsdfPGRL 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 92 YIIslIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMe 168
Cdd:PRK06458 284 LLI--FGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY- 360
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 193162924 169 aivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWS 216
Cdd:PRK06458 361 --------GTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
26-256 |
4.86e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 98.87 E-value: 4.86e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 26 LSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGP-TPISALIhAATMVAAGIFLVARLLPLFIV--IPSIMYIISLIGIITV 102
Cdd:PRK07691 208 ITVVAILFLFVFATKAGLFPLYFWLPGSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 103 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLgsgsIIHSMEAIVGYSPDKSq 179
Cdd:PRK07691 287 IFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMtesGMIGAIYYLIHDMIVKAALFL----LIGIMIKITGTTDLKK- 361
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 193162924 180 nmilMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLF-SPIFAIIACSTAGLTAFYMFRIYLLTFEG 256
Cdd:PRK07691 362 ----MGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
26-217 |
2.93e-21 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 97.11 E-value: 2.93e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 26 LSLCAFLLFVGPIAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLpLFIVIPSIMY--IISLIGIITV 102
Cdd:PRK08667 204 LSLVFLLLFLGFGIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRFL-MDVLSPELWWgvLILLAGSISA 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 103 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALG--------------MGSYRSALFHLITHAYSKALLFLGSGSIIHSMe 168
Cdd:PRK08667 282 LLGVIYALKEHDLKGLLAYSSIENIGIILMGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHAT- 360
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 193162924 169 aivgyspdKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSK 217
Cdd:PRK08667 361 --------GTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASE 401
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
1-273 |
5.31e-21 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 95.40 E-value: 5.31e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDLFEIFNNLILNNrvNLLFLSLcaFLLFVGPIAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAA-GIFLVA 78
Cdd:TIGR01770 181 GSLNFEDLLLFLSNGMLNI--SLLLLGI--VLILVGLLFKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 79 RLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKAL 155
Cdd:TIGR01770 257 FLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTlegIKAVLFYIFIYALMSLG 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 156 LFlgsgSIIHSMEAIVGYSPDksqNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNdSLLFSPIF--AI 233
Cdd:TIGR01770 337 AF----GVLSLLRSYKDEWIE---YISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFF-ALLKSGLYwlAV 408
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 193162924 234 IACSTAGLTAFYMFRIYLLTFEGHLNTYFINYSGKKSSSF 273
Cdd:TIGR01770 409 IAVLTSVIGAFYYLRVVKVMYFDKPERRIPSNPQSKAQSL 448
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
30-254 |
1.66e-20 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 94.25 E-value: 1.66e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 30 AFLLFVGPIAKSAQFPLHvWLPDAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFIVIPSIMY-IISLIGIITVLLGA 106
Cdd:PRK12663 210 ALLFLLAFGMKAALFPFM-WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHpLLATMAAITMVIGA 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 107 TLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY---RSALFHLITHAYSKALLFLGSGSIIhsmeAIVGYSPDKSqnmil 183
Cdd:PRK12663 288 LGALAYKDIRRIAGYQVISSIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLV----RLTGYRSLQY----- 358
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 193162924 184 MGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSL-LFSPIFAIIACSTAGLTAFYMFRIYLLTF 254
Cdd:PRK12663 359 LGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALdNGAYILLALMLITSLITMYSLFRIFFLAY 430
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
30-217 |
9.30e-20 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 92.26 E-value: 9.30e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 30 AFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFivipsimYIISLIGIITVLLGATLA 109
Cdd:PRK12668 186 AWLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGT-------ELLIYIGAAMAVYGVFFA 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 110 LAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmeaiVGYSpdksqNMILMGG 186
Cdd:PRK12668 259 LLENDLRRLLSYHIVSQVGYMVAGIGIGTalaINGAVAHAFNHILYKGLLFMSAGAVLYR----TGTE-----KLTELGG 329
|
170 180 190
....*....|....*....|....*....|.
gi 193162924 187 LTKHVPITKTAFLVGTLSLCGIPPLACFWSK 217
Cdd:PRK12668 330 LYRSMPLTALFCLVGALSISAFPLFSGFVSK 360
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
26-217 |
6.91e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 89.26 E-value: 6.91e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 26 LSLCAFLLFVGPIaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLL 104
Cdd:PRK12665 209 TALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVV 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 105 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNM 181
Cdd:PRK12665 287 GILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSL 357
|
170 180 190
....*....|....*....|....*....|....*.
gi 193162924 182 ILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSK 217
Cdd:PRK12665 358 RRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGK 393
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
1-256 |
2.38e-17 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 84.88 E-value: 2.38e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDLFEIFNNLILNNRVNLLflSLCAFLLFVGPIaksaqfPLHVWLPDAMEGPTPISALIHAATMVAAGIF----- 75
Cdd:PRK08042 162 GTLDLRLLDMRMQQLPLGSDIWLL--GVIGFGLLAGII------PLHGWVPQAHANASAPAAALFSTVVMKIGLLgiltl 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 76 -LVARLLPLFIVIpsimyIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG--------------SYR 140
Cdd:PRK08042 234 sLLGGNAPLWWGV-----ALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLV 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 141 SALFHLITHAYSKALLFLGSGSIIHSmeaiVGYspdksQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEI 220
Cdd:PRK08042 309 GGLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVI 379
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 193162924 221 ------LNDSLLF-----SPIFAIIACSTAGLTAFYMFRIYLLTFEG 256
Cdd:PRK08042 380 yqsffkLSNSGAFvarllGPLLAVGLAITGALAVMCMAKVYGVTFLG 426
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-249 |
1.82e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 81.70 E-value: 1.82e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQDLFEIFNNLILNNRVNLLFLslcafLLFVGPIAKSAQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVAR 79
Cdd:PRK12662 188 GTLNMGDMFLIIQDLPTNRAIQIGVL-----FIMVGLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIR 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 80 LL------PLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR---SALFHLITHA 150
Cdd:PRK12662 262 IVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHS 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 151 YSKALLFLGSGSIIHsmeaivGYSPDKSQNMIlmgGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILN---DSLLF 227
Cdd:PRK12662 342 IVKSALFMVSGSISY------HFGTTKLEDCL---NLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDafiKSNAW 412
|
250 260
....*....|....*....|..
gi 193162924 228 SPIFAIIACStaGLTAFYMFRI 249
Cdd:PRK12662 413 IGLVVLLVGS--GLSVIYVWKI 432
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
21-254 |
2.13e-16 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 81.85 E-value: 2.13e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 21 VNLLFLSLCAFLLFvgpIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPLFIVIPSIMYIISLIGII 100
Cdd:MTH00063 154 SGSFLCCLFFFLIV---FTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDYLLGFSWLSIFFSVLLLL 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 101 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIihsmeaIVGYSPDKSQN 180
Cdd:MTH00063 230 TIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV------MSGSGGSQSSN 303
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 193162924 181 MILMGGLTKHVPITKTAFLVgtLSLCGIPPLACFWSKDEILND--SLLFSPIFAIIACSTAGLTAFYMFRIYLLTF 254
Cdd:MTH00063 304 CVYSSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVILCVFLSYLYSFRLCLILF 377
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
26-246 |
1.42e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 79.03 E-value: 1.42e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 26 LSLCAFLLFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFI---VIPSIMYIISLIGIIT 101
Cdd:PRK08676 205 LGASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFS 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 102 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGsIIHSMeaivgYSPDKS 178
Cdd:PRK08676 284 IAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRF 357
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 193162924 179 QNmilMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSP-----IFAIIACSTAGLTAFYM 246
Cdd:PRK08676 358 DR---IFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVwlvlaVLLLLLLAASSFAIFLL 427
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
25-217 |
4.95e-15 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 77.40 E-value: 4.95e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 25 FLSLCAFLLFVGPIA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLLPLfiVIPSI----MYIISLIG 98
Cdd:PRK02504 207 LGLALALVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLVT--AFPSFdeqwKLLFTALA 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 99 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITH------AYSKALLF-LGSGSiihsmE 168
Cdd:PRK02504 284 ILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAYlfmnlgAFACVILFsLRTGT-----D 358
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 193162924 169 AIVGYSpdksqnmilmgGLTKHVPITKTAFLVGTLSLCGIPPLACFWSK 217
Cdd:PRK02504 359 QISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
40-253 |
6.80e-15 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 76.99 E-value: 6.80e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 40 KSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLV----------ARLLPLFIVIPSIMYIIslIGIITVLLGATL 108
Cdd:PRK12561 198 KLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKmggyalirfnVQMLPDAHVYFAPALAI--LGVVNIIYGALN 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 109 ALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLITHAYSKALLFLGSGsiihsmeaiVGYSPDKSQNMIL 183
Cdd:PRK12561 269 AFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQMISHGLIAAALFFLTG---------VTYERTHTLSIPN 337
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 193162924 184 MGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEI---LNDSLLFSPIFAIIacsTAGLTA--FYMFRIYLLT 253
Cdd:PRK12561 338 MGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgITSSDVYSSTFRTI---TILLAAvgLILTPIYLLS 409
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
1-217 |
9.37e-15 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 76.58 E-value: 9.37e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 1 GSFEFQdlfEIFNNLILNNRVNLLFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVAR 79
Cdd:CHL00049 191 GEIELQ---EIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATR 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 80 LLPlfIVIPSIM----YIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKAL 155
Cdd:CHL00049 267 IFD--IPFYFSSnewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIF 344
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 193162924 156 LFLGSGSIIHSMEAIVGyspdkSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSK 217
Cdd:CHL00049 345 MNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
26-264 |
1.09e-14 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 76.28 E-value: 1.09e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 26 LSLCAFLLFVGPIA-----KSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVAR----LLPLFIVIpsIMYIIS 95
Cdd:PRK06473 199 LPLSTQLLLLAPILvgfgiKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRfgvgLFPEAWVY--LAPWLA 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 96 LIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGsiihsmeaiVG 172
Cdd:PRK06473 276 TWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISALLFLLVG---------VV 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 173 YSPDKSQNMILMGGL---TKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRI 249
Cdd:PRK06473 347 YKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLL 426
|
250
....*....|....*
gi 193162924 250 YLLTFEGHLNTYFIN 264
Cdd:PRK06473 427 VNRVFFGRLTAELSN 441
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
14-217 |
1.25e-14 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 75.84 E-value: 1.25e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 14 NLILNNRVNLLFLsLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFIVIPS 89
Cdd:PRK06277 187 NALLVNPTSPVIY-GGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPS 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 90 IMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIihs 166
Cdd:PRK06277 265 AQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV--- 341
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 193162924 167 meaivgYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSK 217
Cdd:PRK06277 342 ------SYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSK 386
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
2-251 |
5.09e-14 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 74.36 E-value: 5.09e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 2 SFEFQDLFEifNNLILNNRVNLLFLSLCAFLLfvgpiaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL- 80
Cdd:PRK07363 188 SFDYDAIST--QNLSLNTQLILLTGLLLGFGI------KIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFg 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 81 LPLFiviPSIMYIIS----LIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSK 153
Cdd:PRK07363 260 LQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLIL 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 154 ALLFLGSGSIihsmEAIVGyspdkSQNMILMGGL---TKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPI 230
Cdd:PRK07363 337 ALLFHLVGIV----ERKVG-----TRDLDVLNGLmnpIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPI 407
|
250 260
....*....|....*....|.
gi 193162924 231 FAIIACSTAGLTAFYmFRIYL 251
Cdd:PRK07363 408 PTLLCIVASGLTAVY-FVILL 427
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
14-263 |
1.77e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 65.44 E-value: 1.77e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 14 NLILNNRVNL--LFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarllpLFIVIPSI 90
Cdd:MTH00196 80 NLVLNSGQSFssVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLN 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 91 MYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLgsgsiihsm 167
Cdd:MTH00196 152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESiqaSLVYLFIYIIMSICVFS--------- 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 168 eAIVGYSPDKSQnMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL----NDSLLFSPIFAIIACSTAGLta 243
Cdd:MTH00196 223 -IILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILlsgvVYQYYLIFLLAVFCSVIAGV-- 298
|
250 260
....*....|....*....|
gi 193162924 244 fYMFRIYLLTFEGHLNTYFI 263
Cdd:MTH00196 299 -YYVRIVKILFFQANSFLLI 317
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
30-245 |
2.31e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 66.03 E-value: 2.31e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 30 AFLLFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLF----------IVIPSIMYiislIG 98
Cdd:PRK12666 213 AALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeagasagFGQDWLLP----GG 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 99 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFL-----------GSGSII 164
Cdd:PRK12666 287 LATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgaAADRLA 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 165 HSMEAivgYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSK----DEILNDS-----------LLFSP 229
Cdd:PRK12666 367 VTPEL---YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKfallQALLNPPgagaawwlwalVLLSG 443
|
250
....*....|....*.
gi 193162924 230 IFAIIACSTAGLTAFY 245
Cdd:PRK12666 444 LAALIALTRAGIRLFW 459
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
27-249 |
2.43e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 66.04 E-value: 2.43e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 27 SLCAFLLFVGPIAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVArllplfIVIPSIMYIIslIGIITVLLG 105
Cdd:MTH00198 299 SLGYLFITVAILFKLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTS------LVITSKLLLS--VAIISLVVG 370
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 106 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSaLFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMILMG 185
Cdd:MTH00198 371 AFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYES-LQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFG 449
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 186 G------------LTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFS-----PIF---AIIACSTAGLTAFY 245
Cdd:MTH00198 450 NynlvrrlvdltiLSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAfssslSIYylvALFAIICTCISAFY 529
|
....
gi 193162924 246 MFRI 249
Cdd:MTH00198 530 YIRI 533
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
32-221 |
7.99e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 63.88 E-value: 7.99e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 32 LLFvgpiaKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarllPLFIVIPSIMYIISLIGIITVLLGATLAL 110
Cdd:MTH00199 200 LLF-----KLSAAPFHMWAPDVYEGaPTITTALL--ATVPKIGVF------SILVQIGPVTNVVLICAVLSIIYGAIGAL 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 111 AQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHayskALLFLGSGSIIHSMEAIVGYspdksqnMILMGGL 187
Cdd:MTH00199 267 NQTKIKRLLAYSGIGHMGFILFGVAIGSFESiqaSLIYMIIY----VIMSICSFSIILSLKLTKGL-------IVEVSGL 335
|
170 180 190
....*....|....*....|....*....|....
gi 193162924 188 TKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL 221
Cdd:MTH00199 336 SRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
22-279 |
6.33e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 60.67 E-value: 6.33e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 22 NLLFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfiviPSIMYIISLIGIIT 101
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDL----YWLAYLLCVISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 102 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNM 181
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 182 ILMGGLtkhvpitktaflvgtLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTA--FYMFRIYLLTfeghLN 259
Cdd:MTH00144 235 SIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSF----LS 295
|
250 260
....*....|....*....|
gi 193162924 260 TYFINYSGKKSSSFYSISLW 279
Cdd:MTH00144 296 SSKSKKSNSSKVLNSSIISL 315
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
44-253 |
2.59e-09 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 59.34 E-value: 2.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 44 FPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV----------ARLLPLFIVIPSIMYIIslIGIITVLLGATLALAQK 113
Cdd:PRK02546 230 VPLHTWLPDAHGEAT---APVH---MLLAGILLKmggyallrmnAGMLPDAHAQFAPLLIV--LGVVNIIYAALTSFAQR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 114 DIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLITHAYSKALLFLgsgsiihsmeaIVGYSPDKSQNMIL--MGG 186
Cdd:PRK02546 302 NLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLFF-----------LVGATYDRTHTLMLdeMGG 368
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 187 LTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEI---LNDSLLFSPIFAIIACSTAGLTAFyMFRIYLLT 253
Cdd:PRK02546 369 VGQKMRKMFAMWTACSLASLALPGMSGFVAELMVfvgFATSDAYTLPFRVVVVFLAAVGVI-LTPIYLLS 437
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
33-247 |
1.67e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 56.85 E-value: 1.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 33 LFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPSIMYIISLIGIITVLLGATLAL 110
Cdd:MTH00226 236 IFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIVGIVYGSFATC 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 111 AQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFLgsgsiihsmEAIVGYSPDKSQNMILMGGL 187
Cdd:MTH00226 316 RQIDVKRLVAYSSVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFI---------LVTILYDRHHTRLIKYYRGL 386
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 188 TKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMF 247
Cdd:MTH00226 387 SITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
21-272 |
4.58e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 54.97 E-value: 4.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 21 VNLLFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivipSIMYIISLIGII 100
Cdd:MTH00200 86 ISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPA-----LNSNILLLLGLL 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 101 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLgsgsiihsmeaivgYSPDKSQN 180
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL--------------LNLLNSTK 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 181 MILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFS-PIFAIIACSTAGLTAFYMFRI-YLLTFEGHL 258
Cdd:MTH00200 227 INSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGlFIYATILLLGSLLSLFFYLRLsYLTLLTLSP 306
|
250
....*....|....
gi 193162924 259 NTYFINYSGKKSSS 272
Cdd:MTH00200 307 NQINMMSSWRTKSN 320
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
45-253 |
7.15e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 54.44 E-value: 7.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 45 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarllpLFIVIPSI-MYIISLIGIITVLLGATLALAQKDIKRGLAYST 123
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLTL------LLMTSNSLnPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 124 MSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgsIIHSMEAIvgyspdKSQNMILMggLTKhVPITKTAFLVGTL 203
Cdd:MTH00112 184 IAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTSTK------TLKDMMTS--WTK-SPTLNTTLMLTLL 249
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 193162924 204 SLCGIPPLACFWSKDEILND--SLLFSPIFAIIACSTAGLTAFYMFRIYLLT 253
Cdd:MTH00112 250 SLAGLPPLTGFMPKWLILQEltKQNMTPTATIMAMLSLLSLFFYLRLTYIST 301
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
22-278 |
1.17e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 53.52 E-value: 1.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 22 NLLFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIV--IPSIMYIISLIGI 99
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLILafNSSSFMGLLICSV 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 100 ITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQ 179
Cdd:MTH00197 145 LSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 180 NMILmggltkhvpitktaFLVGTLSLCGIPPLACFWSKDEILNdSLLFSPIFAIIACSTAG--LTAFYMFRIYLLTFegh 257
Cdd:MTH00197 225 NLVF--------------LGLSFLSLGGLPPLSGFFLKWLILT-SLLSSNISLITFMLILStcFSLYYYLSLAYKSL--- 286
|
250 260
....*....|....*....|.
gi 193162924 258 LNTYFINYSGKKSSSFYSISL 278
Cdd:MTH00197 287 ILSNWMINFLMKINLLYSGLF 307
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
8-258 |
3.23e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 52.61 E-value: 3.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 8 LFEIFNNLILNNRVNLLFLSLC--AFLLfvgpiaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VA 78
Cdd:MTH00068 178 LLELMSPMQLMTYTNKIWWLACllAFMV------KMPLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygIL 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 79 RLLPLFI-VIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAY-SK 153
Cdd:MTH00068 245 RISILLTpLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSS 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 154 ALLFLgsgsiihsmeAIVGYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSkdEILNDSLLF--SPIF 231
Cdd:MTH00068 325 ALFCL----------ANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWG--ELTIMVSLFnwSNWT 392
|
250 260
....*....|....*....|....*..
gi 193162924 232 AIIACSTAGLTAFYMFRIYLLTFEGHL 258
Cdd:MTH00068 393 ILITGLGTLITAAYTLYMFLMTQRGPL 419
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
28-264 |
9.53e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 51.11 E-value: 9.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 28 LCAFLLfvgpiaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL----PLFIVIPSIMYIISLIGIItvl 103
Cdd:MTH00127 201 LLAFLV------KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMvmldPLTKELSYPFIILALWGII--- 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 104 LGATLALAQKDIKRGLAYSTMSQLGYM---MLALGMGSYRSALFHLITHAYSKALLFLgsgsiihsmEAIVGYSPDKSQN 180
Cdd:MTH00127 272 MTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLTSSALFC---------LANTNYERTHSRT 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 181 MILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLNT 260
Cdd:MTH00127 343 MLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPD 422
|
....
gi 193162924 261 YFIN 264
Cdd:MTH00127 423 HIIA 426
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-234 |
1.61e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 50.50 E-value: 1.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 21 VNLLFLSLCAFLLFVGPIAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVARLLPLFIVipSIMYIISLIGII 100
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFF--SGEEILLFLGII 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 101 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSA-----LFHLITHAYSKALLFLGSGSIIHSMEAIvgysp 175
Cdd:PRK12664 211 TAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVaigilILQIVLSVVYQTLLFMVADSVINRTRKF----- 285
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 193162924 176 dksqNMILMGGLTKhVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAII 234
Cdd:PRK12664 286 ----NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
27-280 |
2.54e-06 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 49.54 E-value: 2.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 27 SLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIhaatmvAAGIFLVARLLPLFIVIPSI-MYIISLIGIITVLLG 105
Cdd:MTH00041 92 TLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLI------IATWQKIAPLILLISISNLLnSNILILCGILSVLVG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 106 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIvgyspdksqnmilmG 185
Cdd:MTH00041 166 GWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHL--------------N 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 186 GLTKHVPITKTAFLVGTLSLCGIPPLACFWSK-----DEILNDSLLFSPIFAIIACstagLTAFYMFRI----YLLTFEG 256
Cdd:MTH00041 232 KLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIILIIGSL----LSLFFYLRIsfntSLTLFPQ 307
|
250 260 270
....*....|....*....|....*....|.
gi 193162924 257 HL-------NTYFINYSGKKSSSFYSISLWG 280
Cdd:MTH00041 308 HSislfswrNSGNITVYGVILSILSSISILG 338
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
32-211 |
2.57e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 50.17 E-value: 2.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 32 LLFVGPIAKSAQFPLHV--WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPS--IMYIISLIGIITVLLGAT 107
Cdd:PRK06459 163 LASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIgyFGLTILAIGAFSILFGAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 108 LALAQKDIKRGLAYSTMSQLGYMMLALGM--------GSYR-----SALFHLITHAYSKALLFLGSGsiiHSMEAIVGYS 174
Cdd:PRK06459 243 YAYVSENVKGLLAFSTIENNGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSG---LQEKQSITYS 319
|
170 180 190
....*....|....*....|....*....|....*..
gi 193162924 175 PDKSQNMILMGGltkhvpitktafLVGTLSLCGIPPL 211
Cdd:PRK06459 320 KKIRNRWIELGL------------TLLASSLSGLLPN 344
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
32-198 |
4.30e-05 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 46.09 E-value: 4.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 32 LLFVG-PIA---KSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVA----------RLLP--LFIVIPSIMyii 94
Cdd:CHL00011 212 LFYIGfLIAyavKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMgayglirinmELLPhaHSIFSPWLV--- 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 95 sLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSY-----RSALFHLITHAYSKALLFLgsgsiihsmea 169
Cdd:CHL00011 282 -IVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIGAALFF----------- 347
|
170 180 190
....*....|....*....|....*....|.
gi 193162924 170 IVGYSPDKSQNMIL--MGGLTKHVPITKTAF 198
Cdd:CHL00011 348 LAGTSYDRIRLVYLdeMGGIAIPMPKIFTMF 378
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
34-209 |
1.16e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 44.67 E-value: 1.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 34 FVGPIAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMY-IISLIGIITVLLGATLALA 111
Cdd:MTH00204 216 FLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFApLIVMLSVIAVIYGSLTTCR 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 112 QKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMILMGGLT 188
Cdd:MTH00204 296 QVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFL---------YERHHTRLIKYYRGLT 366
|
170 180
....*....|....*....|.
gi 193162924 189 KHVPITKTAFLVGTLSLCGIP 209
Cdd:MTH00204 367 LTMPLFVIIMLVLSLANMGFP 387
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
30-249 |
2.74e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 43.23 E-value: 2.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 30 AFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivipSIMYIISLIGIITVLLGATLA 109
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 110 LAQKDIKRGLAYSTMSQLGYMMLALgMGSYRSALFHLITHAYskallflgsgsIIHSMEAIVGYSPDKSQNMilMGGLTK 189
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYII-----------ITTPLMLLFAYLNAFSTKF--NSKISS 231
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 193162924 190 HVPITKTAFLVGTLSLCGIPPLACF---WSKDEILNDSLLFSPIFAIIACSTAGLtaFYMFRI 249
Cdd:MTH00011 232 MSQTTSMSLFIMLLSLGGLPPFTGFmpkLMAIETLTSNSMILILLVLIVGSLMNL--FYYLNL 292
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
8-266 |
4.25e-04 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 42.66 E-value: 4.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 8 LFEIFNNLILNNRVNLLFLSLCAFLLFVGPIAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIFLVARLLPLFIV 86
Cdd:MTH00044 175 LSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAILLKLGGYGLIRLINLFSL 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 87 IPSImyIISLIGIITVLLGATLA----LAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAY-SKALLFL 158
Cdd:MTH00044 254 PSAN--NISFILIVFCCWGALITsiicLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGingALILMIAHGLvSSALFCL 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 159 gsgsiihsmeAIVGYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACST 238
Cdd:MTH00044 332 ----------ANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLA 401
|
250 260
....*....|....*....|....*...
gi 193162924 239 AGLTAFYMFRIYLLTFEGHLNTYFINYS 266
Cdd:MTH00044 402 TVFGAIYSLLIYQLTNSGSFPSWISNVS 429
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
46-266 |
8.67e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 41.85 E-value: 8.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 46 LHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFI-VIPSIMYIISLIGIITVLLGATLALAQKDIKR 117
Cdd:MTH00206 208 VHLWLPKAhVEAPV-------AGSMVLAGVLLklggygMMRIILILGpSTKLSSYFFIILGLWGSIMTSSICLRQTDLKS 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 118 GLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAY-SKALLFLGSgsiihsmeaiVGYSPDKSQNMILMGGLTKHVPI 193
Cdd:MTH00206 281 LIAYSSVSHMSLVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPL 350
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 193162924 194 TKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLNTYFINYS 266
Cdd:MTH00206 351 LSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
8-279 |
1.64e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 40.58 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 8 LFEIFNNLILNNRVNLLFLSLCAFLLFVgpiaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarlLPLFIVI 87
Cdd:MTH00160 72 LFSIILNMLNLMLFNNISSMLINSSLLL----KLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLIL----LSYLINN 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 88 PSIMYIIsligIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLIthaYSKALLFLgsgsiihsm 167
Cdd:MTH00160 144 NFIIIII----ILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLI---YSIISLSI--------- 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 168 eaIVGYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILN---DSLLFSPIFAIIACSTagLTAF 244
Cdd:MTH00160 208 --ILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQlliSNNMFFLLFILIMSSL--ITLY 283
|
250 260 270
....*....|....*....|....*....|....*..
gi 193162924 245 YMFRI--YLLTFEGHLNTYFINYSGKKSSSFYSISLW 279
Cdd:MTH00160 284 FYLRIsySSLMLNYNKNKWNLKKKKNKFSLILNFLSF 320
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
12-275 |
3.21e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 39.82 E-value: 3.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 12 FNNLILNNRVNLLFLSLCAFLLFvgpIAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLF 84
Cdd:MTH00150 140 LISSLRKLLSSMGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVF 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 85 IVIPSIMYIIsligIITV-----LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALL 156
Cdd:MTH00150 210 SLSSSSFSIF----LISLslwggVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFCSSGL 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 157 FlgsgsiihsmeAIVGYSPDKSQ--NMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAII 234
Cdd:MTH00150 286 F-----------CLANYTYEKVHsrSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVP 354
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 193162924 235 ACSTAGLTAFYMFRIYLLTFEGHLNTYFINYSGKKSSSFYS 275
Cdd:MTH00150 355 LGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLL 395
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
23-261 |
3.38e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 39.72 E-value: 3.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 23 LLFLSLCAFLLFVGPIAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFIVI-----PSI 90
Cdd:MTH00014 183 IYLMNLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygLLRMSSLFMHInkslsAPF 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 91 MYIISLIGIITVLLgatlALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIihsm 167
Cdd:MTH00014 256 SSISLVGAVITSLI----CIRQPDLKSLIAYSSVGHMGLMTAGIMSNTswgWQGALAMMIAHGLCSSALFALANMT---- 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 168 eaivgYSPDKSQNMILMGGLTKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMF 247
Cdd:MTH00014 328 -----YETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSL 402
|
250
....*....|....
gi 193162924 248 RIYLLTFEGHLNTY 261
Cdd:MTH00014 403 FLYTSTQHGSPPSF 416
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
35-254 |
6.73e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 38.99 E-value: 6.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 35 VGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSI----MYIISLIGIITVLLGATLAL 110
Cdd:PRK06591 222 IGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYETIktaiTNFIRPIALATLIIAPYFAY 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193162924 111 AQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLithayskaLLFLGSGSIIHSMEAIVGYSPDKSQNMILmggltkh 190
Cdd:PRK06591 302 QAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILPSL--------LLADSINKIALFLIDAYNESYKREPNKVL------- 366
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 193162924 191 vpitktaFLVGTLSLCGIPPLACFWSKDEI----LNDSLLFSpiFAIIACSTAGlTAFYMFRIYLLTF 254
Cdd:PRK06591 367 -------IIIAIICSCGLPISPLFFIKVNIlellLTQNLLLD--FIIILLSSVG-SLFYHYKMVLLLF 424
|
|
| |
