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Conserved domains on  [gi|192293790|ref|YP_001994429|]
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ATP synthase F0 subunit 6 (mitochondrion) [Acanella arbuscula]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009609)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 3-237 1.56e-99

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214447  Cd Length: 232  Bit Score: 289.25  E-value: 1.56e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790   3 MAASFFDQFNVVRIIGgiITNSSIMMLILLAVVLIGSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITL 82
Cdd:MTH00172   1 MSSSYFDQFNIVWLIG--LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  83 FVFIAGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVIIETISYISRAIS 162
Cdd:MTH00172  79 FFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAIS 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 192293790 163 LGVRLAANLSAGHLLFAILASFGFAMISNGMlVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIYINDTLNLH 237
Cdd:MTH00172 159 LGVRLAANLSAGHLLFAILAGFGFNMLCASG-FLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADTIVLH 232
 
Name Accession Description Interval E-value
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 3-237 1.56e-99

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 289.25  E-value: 1.56e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790   3 MAASFFDQFNVVRIIGgiITNSSIMMLILLAVVLIGSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITL 82
Cdd:MTH00172   1 MSSSYFDQFNIVWLIG--LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  83 FVFIAGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVIIETISYISRAIS 162
Cdd:MTH00172  79 FFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAIS 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 192293790 163 LGVRLAANLSAGHLLFAILASFGFAMISNGMlVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIYINDTLNLH 237
Cdd:MTH00172 159 LGVRLAANLSAGHLLFAILAGFGFNMLCASG-FLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADTIVLH 232
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 8-232 5.61e-46

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 152.75  E-value: 5.61e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790    8 FDQFNVVRIIGGIITNSSIMMLILLAVVLIGS-CSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITLFVFI 86
Cdd:TIGR01131   2 FSQFDISPITLFSLTLLSLILLLSLLIFLISSsLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790   87 AGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVIIETISYISRAISLGVR 166
Cdd:TIGR01131  82 LISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVR 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 192293790  167 LAANLSAGHLLFAILASFGFAMISNGMLVLslgPILVMVFITLLEIAVALIQAYVFCLLTAIYIND 232
Cdd:TIGR01131 162 LFANISAGHLLLTLLSGLLFSLMSSAIFAL---LLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 72-231 4.81e-38

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 129.83  E-value: 4.81e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  72 GTQYFTLIITLFVFIAGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVII 151
Cdd:cd00310    1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790 152 ETISYISRAISLGVRLAANLSAGHLLFAILASFGFAMisngMLVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIYIN 231
Cdd:cd00310   81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSL----LSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 26-235 1.71e-37

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 130.19  E-value: 1.71e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  26 IMMLILLAVVLIGSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITLFVFIAGLNLFGLFPYVFTPTAHI 105
Cdd:COG0356    8 LAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADI 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790 106 IVTFGLSLSILMAVTILGITR--FRWNFASMMMPSgaPLLLAPLLVIIETISYISRAISLGVRLAANLSAGHLLFAILAS 183
Cdd:COG0356   88 NVTLALALIVFVLVHYYGIKKkgLGGYLKHLFFPP--FPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAG 165

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 192293790 184 FGFamisngMLVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIYINDTLN 235
Cdd:COG0356  166 LAP------FLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAVE 211
ATP-synt_A pfam00119
ATP synthase A chain;
26-231 2.09e-35

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 124.91  E-value: 2.09e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790   26 IMMLILLAVVLIGS-CSYKLIPTRLQSIQEIVYTHFLGLVKDSTANK-GTQYFTLIITLFVFIAGLNLFGLF---PYVFT 100
Cdd:pfam00119   6 IVALILLLFLLLATrKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKkGRKFFPLLLTLFFFILVSNLLGLIpksPGGFT 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  101 PTAHIIVTFGLSLSILMAVTILGITR--FRWNFASMMMPSgAPLLLAPLLVIIETISYISRAISLGVRLAANLSAGHLLF 178
Cdd:pfam00119  86 VTADINVTLALALIVFLLVHYYGIKKhgLGGYFKKLFVPP-VPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 192293790  179 AILASFGFAMISNGmLVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIYIN 231
Cdd:pfam00119 165 LLLAGLIFALLSAG-FLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
 
Name Accession Description Interval E-value
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 3-237 1.56e-99

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 289.25  E-value: 1.56e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790   3 MAASFFDQFNVVRIIGgiITNSSIMMLILLAVVLIGSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITL 82
Cdd:MTH00172   1 MSSSYFDQFNIVWLIG--LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  83 FVFIAGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVIIETISYISRAIS 162
Cdd:MTH00172  79 FFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAIS 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 192293790 163 LGVRLAANLSAGHLLFAILASFGFAMISNGMlVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIYINDTLNLH 237
Cdd:MTH00172 159 LGVRLAANLSAGHLLFAILAGFGFNMLCASG-FLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADTIVLH 232
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 3-237 1.77e-84

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 251.46  E-value: 1.77e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790   3 MAASFFDQFNVVRIIG---------GIITNSSIMMLILLAVVLIGSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGT 73
Cdd:MTH00175   1 MLAAYFDQFNIIRLITiqaflgdwlVTFTNSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  74 QYFTLIITLFVFIAGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVIIET 153
Cdd:MTH00175  81 KYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790 154 ISYISRAISLGVRLAANLSAGHLLFAILASFGFAMISNGMLVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIYINDT 233
Cdd:MTH00175 161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDT 240


                 ....
gi 192293790 234 LNLH 237
Cdd:MTH00175 241 IALH 244
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 3-237 6.36e-47

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 155.87  E-value: 6.36e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790   3 MAASFFDQFNVVRII------------GGIITNSSIMMLILLAVVLIGSCSYK-----LIPTRLQSIQEIVYTHFLGLVK 65
Cdd:MTH00174   1 MVAAYFDQFNIIPIFsiwvyflsfwinGEFFCFTNTFFMMSFAVFLFYTIGAKgnnntLVPNRILVGLELIYSHFYTVLK 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  66 DSTANKGTQYFTLIITLFVFIAGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLA 145
Cdd:MTH00174  81 DNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790 146 PLLVIIETISYISRAISLGVRLAANLSAGHLLFAILASFGFAMISNGMLVLSLGPILVMVFITLLEIAVALIQAYVFCLL 225
Cdd:MTH00174 161 PLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSFVPFAILIFVTILEMAVAIIQAYVFTLL 240

                        250
                 ....*....|..
gi 192293790 226 TAIYINDTLNLH 237
Cdd:MTH00174 241 TIVYLRDTVELH 252
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 8-232 5.61e-46

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 152.75  E-value: 5.61e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790    8 FDQFNVVRIIGGIITNSSIMMLILLAVVLIGS-CSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITLFVFI 86
Cdd:TIGR01131   2 FSQFDISPITLFSLTLLSLILLLSLLIFLISSsLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790   87 AGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVIIETISYISRAISLGVR 166
Cdd:TIGR01131  82 LISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVR 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 192293790  167 LAANLSAGHLLFAILASFGFAMISNGMLVLslgPILVMVFITLLEIAVALIQAYVFCLLTAIYIND 232
Cdd:TIGR01131 162 LFANISAGHLLLTLLSGLLFSLMSSAIFAL---LLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 72-231 4.81e-38

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 129.83  E-value: 4.81e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  72 GTQYFTLIITLFVFIAGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVII 151
Cdd:cd00310    1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790 152 ETISYISRAISLGVRLAANLSAGHLLFAILASFGFAMisngMLVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIYIN 231
Cdd:cd00310   81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSL----LSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 26-235 1.71e-37

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 130.19  E-value: 1.71e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  26 IMMLILLAVVLIGSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITLFVFIAGLNLFGLFPYVFTPTAHI 105
Cdd:COG0356    8 LAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADI 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790 106 IVTFGLSLSILMAVTILGITR--FRWNFASMMMPSgaPLLLAPLLVIIETISYISRAISLGVRLAANLSAGHLLFAILAS 183
Cdd:COG0356   88 NVTLALALIVFVLVHYYGIKKkgLGGYLKHLFFPP--FPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAG 165

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 192293790 184 FGFamisngMLVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIYINDTLN 235
Cdd:COG0356  166 LAP------FLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAVE 211
ATP-synt_A pfam00119
ATP synthase A chain;
26-231 2.09e-35

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 124.91  E-value: 2.09e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790   26 IMMLILLAVVLIGS-CSYKLIPTRLQSIQEIVYTHFLGLVKDSTANK-GTQYFTLIITLFVFIAGLNLFGLF---PYVFT 100
Cdd:pfam00119   6 IVALILLLFLLLATrKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKkGRKFFPLLLTLFFFILVSNLLGLIpksPGGFT 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  101 PTAHIIVTFGLSLSILMAVTILGITR--FRWNFASMMMPSgAPLLLAPLLVIIETISYISRAISLGVRLAANLSAGHLLF 178
Cdd:pfam00119  86 VTADINVTLALALIVFLLVHYYGIKKhgLGGYFKKLFVPP-VPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 192293790  179 AILASFGFAMISNGmLVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIYIN 231
Cdd:pfam00119 165 LLLAGLIFALLSAG-FLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 26-237 3.13e-34

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 122.21  E-value: 3.13e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  26 IMMLILLAVVLIGSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITLFVFIAGLNLFGLFP-YVFTPTAH 104
Cdd:PRK05815  23 LGVLILLLFALVATRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLMNLLGLIPyLLFPPTAD 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790 105 IIVTFGLSLSILMAVTILGITRF-RWNFASMMMPSGAPLLlapllVIIETISYISRAISLGVRLAANLSAGHLLFAILAS 183
Cdd:PRK05815 103 INVTLALALIVFVLVIYYGIKKKgLGGYLKEFYLQPHPLL-----LPIEIISEFSRPISLSLRLFGNMLAGELILALIAL 177

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 192293790 184 FGFAMIsngmlVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIYINDTLNLH 237
Cdd:PRK05815 178 LGGAGL-----LLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISMAVEEE 226
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 23-233 3.71e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 114.11  E-value: 3.71e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  23 NSSIMMLILLAVVLIGSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITLFVFIAGLNLFGLFPYVFTPT 102
Cdd:MTH00157  16 NLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILFNNFLGLFPYIFTST 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790 103 AHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVIIETISYISRAISLGVRLAANLSAGHLLFAILA 182
Cdd:MTH00157  96 SHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLTLLG 175

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 192293790 183 SFGFAMISNGMLVLslgpILVMVFITLLEIAVALIQAYVFCLLTAIYINDT 233
Cdd:MTH00157 176 NTGPSLSSMILSIL----ILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 1-230 1.83e-30

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 112.76  E-value: 1.83e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790   1 MVMAASFFDQFNVVRIIggIITNSSIMMLILLAVVLIgSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLII 80
Cdd:MTH00035   1 MIINNSIFGQFSPDTIL--FIPLTLLSSVIALSWLFF-INPTNWLPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLT 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  81 TLFVFIAGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVIIETISYISRA 160
Cdd:MTH00035  78 TVFILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQP 157

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790 161 ISLGVRLAANLSAGHLLFAILASFGFAMISNGMLVLSLGPILVMVFItlLEIAVALIQAYVFCLLTAIYI 230
Cdd:MTH00035 158 IALGLRLAANLTAGHLLIFLLSTAIWELSNSPLISIITLIIFFLLFI--LEIGVACIQAYVFTALVHFYL 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 3-230 4.47e-30

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 111.60  E-value: 4.47e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790   3 MAASFFDQFNVVRIIGGIItnssIMMLILLAVVLIGSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITL 82
Cdd:MTH00073   1 MNLSFFDQFLSPTLLGIPL----IMLAMLLPWLLFPTPTNKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSL 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  83 FVFIAGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVIIETISYISRAIS 162
Cdd:MTH00073  77 MVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLA 156

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 192293790 163 LGVRLAANLSAGHLLFAILASFGFAMISNgMLVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIYI 230
Cdd:MTH00073 157 LGVRLTANLTAGHLLIQLISTATLVLLPL-MPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 3-229 3.34e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 109.14  E-value: 3.34e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790   3 MAASFFDQFNVVRIIGgiitNSSIMMLILLAVVLIGSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITL 82
Cdd:MTH00120   1 MNLNFFDQFSSPELLG----IPLILLAMLIPALLIPSPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSL 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  83 FVFIAGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVIIETISYISRAIS 162
Cdd:MTH00120  77 MLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLA 156

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 192293790 163 LGVRLAANLSAGHLLFAILASFGFAMIsNGMLVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIY 229
Cdd:MTH00120 157 LGVRLTANLTAGHLLIQLISTATLNLL-PTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLY 222
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 3-234 3.59e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 109.27  E-value: 3.59e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790   3 MAASFFDQFNVVRIIGGIITNSSIMMLILLAVVLIGscsyKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITL 82
Cdd:MTH00179   1 MMLSMFDQFESPSLLGIPLLALALLLPWLLFPSLTN----RWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSL 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  83 FVFIAGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVIIETISYISRAIS 162
Cdd:MTH00179  77 MLFLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLA 156

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 192293790 163 LGVRLAANLSAGHLLFAILASFGFAMIsNGMLVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIYINDTL 234
Cdd:MTH00179 157 LGVRLTANITAGHLLMHLISSAVFVLM-NFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENL 227
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 3-229 1.72e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 107.27  E-value: 1.72e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790   3 MAASFFDQFNVVRIIGGIItnssIMMLILLAVVLIGSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITL 82
Cdd:MTH00132   1 MTLSFFDQFMSPTYLGIPL----IALALTLPWILFPTPTSRWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSL 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  83 FVFIAGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGItRFRWNFA-SMMMPSGAPLLLAPLLVIIETISYISRAI 161
Cdd:MTH00132  77 MLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGM-RNQPTHAlGHLLPEGTPTPLIPVLIIIETISLFIRPL 155

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 192293790 162 SLGVRLAANLSAGHLLFAILASFGFAMISNGMLVLSLGPILvMVFITLLEIAVALIQAYVFCLLTAIY 229
Cdd:MTH00132 156 ALGVRLTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATL-LFLLTLLEVAVAMIQAYVFVLLLSLY 222
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 3-232 3.77e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 106.66  E-value: 3.77e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790   3 MAASFFDQFNVVRIIggIITNSSIMMLILLAVVLIGSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITL 82
Cdd:MTH00176   1 MLVDLFSSFDPPNKN--IFSMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  83 FVFIAGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVIIETISYISRAIS 162
Cdd:MTH00176  79 FILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLT 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790 163 LGVRLAANLSAGHLLFAILASFGFAMISNGMLVLSLGPIlVMVFITLLEIAVALIQAYVFCLLTAIYIND 232
Cdd:MTH00176 159 LAVRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLI-VQILYFMFEIAVCMIQAYVFTLLLSLYLDE 227
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 6-233 1.50e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 104.95  E-value: 1.50e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790   6 SFFDQFNvvriiGGIITNSSIMMLILLAVVLIGSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITLFVF 85
Cdd:MTH00173   7 SSFDDHN-----SSFSSLSFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFLF 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  86 IAGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVIIETISYISRAISLGV 165
Cdd:MTH00173  82 LISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTV 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 192293790 166 RLAANLSAGHLLFAILASFGFAMISNGMLVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIYINDT 233
Cdd:MTH00173 162 RLLANISAGHIVLTLIGNYLSSSLFSSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDEH 229
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 21-232 1.78e-27

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 104.65  E-value: 1.78e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  21 ITNSSIMMLILLAVVLIGSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITLFVFIAGLNLFGLFPYVFT 100
Cdd:MTH00101  14 ILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIGSTNLLGLLPHSFT 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790 101 PTAHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVIIETISYISRAISLGVRLAANLSAGHLLFAI 180
Cdd:MTH00101  94 PTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHL 173

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 192293790 181 LASFGFAMISNGMLVLSLGPIlVMVFITLLEIAVALIQAYVFCLLTAIYIND 232
Cdd:MTH00101 174 IGGATLALMSISTTTALITFI-ILILLTILEFAVALIQAYVFTLLVSLYLHD 224
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 24-232 4.12e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 95.96  E-value: 4.12e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  24 SSIMMLILLAVVLIGSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITLFVFIAGLNLFGLFPYVFTPTA 103
Cdd:MTH00005  22 STAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMIILMNLSGLLPYVFSTSS 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790 104 HIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVIIETISYISRAISLGVRLAANLSAGHLLFAILAS 183
Cdd:MTH00005 102 HLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAANMSAGHIVLSLIGI 181

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 192293790 184 FGFAMISNGMLVLSLgPILVMVFITLLEIAVALIQAYVFCLLTAIYIND 232
Cdd:MTH00005 182 YAASALFSSISSTIL-LILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 21-230 1.90e-14

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 71.31  E-value: 1.90e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  21 ITNSSIMM----LILLAVVLIGSCSYK-----LIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFT-LIITLFVFIAGLN 90
Cdd:PRK13419 106 ITKHVVMMwiasAILLVVFLAAGRKYKkmtksQAPKGLANAMEALVEFIRLDVAKSNIGHGYEKFLpYLLTVFFFILVCN 185

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  91 LFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVIIETISYISRAISLGVRLAAN 170
Cdd:PRK13419 186 LLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKAHGIKGYLAHLTGGTHWSLWIIMIPIEFIGLFTKPFALTVRLFAN 265

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790 171 LSAGHllFAILASFGFAMISNGMLVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIYI 230
Cdd:PRK13419 266 MTAGH--IVILSLIFISFILKSYIVAVAVSVPFAIFIYLLELFVAFLQAYIFTMLSALFI 323
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 27-230 2.13e-14

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 69.72  E-value: 2.13e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  27 MMLILLAVVLIGSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLIITLFVFIAGLNLFGLFPYVFTPTAHII 106
Cdd:PRK13421  29 IMAVLAAGSALATRRLSLAPGRLQSVLELVVTTIDAQIRDTMQTDPAPYRALIGTLFLFVLVANWSSLVPGVEPPTAHLE 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790 107 VTFGLSLSILMAVTILGITR--FRWNFASMMMPSgaplllaPLLVIIETISYISRAISLGVRLAANLSAGHLLFAIlasf 184
Cdd:PRK13421 109 TDAALALIVFLATIYYGVRArgVRGYLATFAEPT-------WVMIPLNLVEQLTRTFSLIVRLFGNVMSGVFVIGI---- 177

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 192293790 185 gfamisngmlVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIYI 230
Cdd:PRK13421 178 ----------VLSLAGLLVPIPLMALDLLTGAVQAYIFAVLAMVFI 213
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 1-230 1.16e-11

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 62.07  E-value: 1.16e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790   1 MVMAASFFDQFNVVRIIGGIITNSSIMMLILLAVVLIgSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQYFTLII 80
Cdd:PRK13420   1 EGFLAHVLFHIGPLPITESVLTTWGIMIVLVLASWLT-TRRLSLDPGRFQVALEGVVSTIEDAIKEVLPRHARLVLPFVG 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  81 TLFVFIAGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWN--FASMMMPSgaplllaPLLVIIETISYIS 158
Cdd:PRK13420  80 TLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGIRAEGLReyLKHYLSPS-------PFLLPFHLISEIT 152

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 192293790 159 RAISLGVRLAANLSaghllfailasfgfAMISNGMLVLSLGPILVMVFITLLEIAVALIQAYVFCLLTAIYI 230
Cdd:PRK13420 153 RTLALAVRLFGNIM--------------SLELAALLVLLVAGFLVPVPILMLHIIEALVQAYIFGMLALIYI 210
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 63-237 7.66e-11

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 61.06  E-value: 7.66e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  63 LVKDSTANKGTQYFTLIITLFVFIAGLNLFGLFPYV-----------------------------------FTPTAHIIV 107
Cdd:PRK13417 145 IVDESMHGHGHSYYHYIFTLFFFILFCNLMGLVPSVgeltvvasdygglvalgvmdhtphalptfakvwsgITVTGDISV 224

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790 108 TFGLSLSILMAVTILGITRFRWNFASMMMPSGAPLLLAPLLVIIETI-SYISRAISLGVRLAANLSAGHLLFAILASFGF 186
Cdd:PRK13417 225 TMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVIILALMGFIF 304

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 192293790 187 AMISNGMLVLSlgpILVMVFITLLEIAVALIQAYVFCLLTAIYINDTLNLH 237
Cdd:PRK13417 305 QFQSWGIVPVS---VIGSGLIYVLEIFVAFLQAYIFVLLTSLFVGLSMHRH 352
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 60-231 1.80e-06

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 46.90  E-value: 1.80e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  60 FLGLVKDSTANKGTQYFTLIITLFVFIAGLNLFGLFPYVFTPTAHIIVTFGLSLSILMAVTILGITRFRWnFASMMMPSG 139
Cdd:MTH00087  36 GLLIIVFSYSNKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSEK-FSVYLSKGS 114

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790 140 APLLLAPLLVIIETISYISRAISLGVRLAANLSAGHLLFAILASFGFamisngmlvlslGPILVMVFITLLEIAVALIQA 219
Cdd:MTH00087 115 DSFLKTFSMLFVEIVSELSRPLALTLRLTVNLMVGHLISSLLNFLGE------------KYVWLSILAIMMECFVAFIQS 182

                        170
                 ....*....|..
gi 192293790 220 YVFCLLTAIYIN 231
Cdd:MTH00087 183 YIFSRLIYLYLN 194
atpI CHL00046
ATP synthase CF0 A subunit
 18-230 1.92e-03

ATP synthase CF0 A subunit


Pssm-ID: 176987  Cd Length: 228  Bit Score: 38.38  E-value: 1.92e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  18 GGIITNSSIMMLILLAVVLIGSCSYKLIPTRLQSIQEIVYTHFLGLVKDSTANKGTQ-YFTLIITLFVFIAGLNLFG-LF 95
Cdd:CHL00046  23 GQVLITSWVVIAILLGSALLATRNLQTIPTGGQNFFEYVLEFIRDLAKTQIGEEEYRpWVPFIGTMFLFIFVSNWSGaLL 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 192293790  96 PY---------VFTPTAHIIVTFGLSLSILMAVTILGI-TRFRWNFASMMMPSGAPLLlapllviIETISYISRAISLGV 165
Cdd:CHL00046 103 PWklielphgeLAAPTNDINTTVALALLTSVAYFYAGLsKKGLGYFGKYIQPTPILLP-------INILEDFTKPLSLSF 175

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 192293790 166 RLAANLSAGHLLFAILASfgfamisngmlvlsLGPILVMVFITLLEIAVALIQAYVFCLLTAIYI 230
Cdd:CHL00046 176 RLFGNILADELVVAVLVS--------------LVPLVVPIPVMFLGLFTSGIQALIFATLAAAYI 226
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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