|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-737 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1381.91 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 1 MEHTYQYAWVIPLLPLPVIMSMGFGLFLIPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTINND 80
Cdd:CHL00025 1 MEHTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINND 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYL 160
Cdd:CHL00025 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 161 LIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIANNWIPNTGINFLLTTLCAFLLFLGAVAK 240
Cdd:CHL00025 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLA 320
Cdd:CHL00025 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 321 YSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSMEPLVGYSPDKSQNMILMGGLRKYVPITRTTFLC 400
Cdd:CHL00025 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 401 GTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGHLRVHFKNYSSTKEGSLYSISLWG 480
Cdd:CHL00025 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 481 KSIPKGVNRDFVLST--TKSGVSFFSQNIPKIPDNTRNKIGSFSTPFGAKNTFVYPHETGNTMLFPLLILLILTLFIGFI 558
Cdd:CHL00025 481 KEESKKINKLLLLLTmnNNERVSFFSKKTYKIDGNVRNMIRSFITIFGNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFI 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 559 GIHFdnrvkDNGISELTILSKWLTPSINFFQESSNSSINSYEFLTNAISSVSLAIFGLFIAYIFYGSAYSFFQNLNFLNS 638
Cdd:CHL00025 561 GIPF-----NQEGIDLDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINS 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 639 LVKGNPKKFFLDEVKKNIYSWSYNRGYIDVFYTRVFILGIRQLTELTNFFDKGVIDGITNGVGLAGFCIGEEIKYVGGGR 718
Cdd:CHL00025 636 FVKGGPKRIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFFVGEGIKYVGGGR 715
|
730
....*....|....*....
gi 1919568534 719 ISSYLFFFLCYVSLFISFF 737
Cdd:CHL00025 716 ISSYLFLYLFYVSIFLLIL 734
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-737 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 696.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 1 MEHTYQYAWVIPLLPLPVIMSMGFGLFLIPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTINND 80
Cdd:PRK07376 1 MESAYQYAWLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYL 160
Cdd:PRK07376 81 FHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 161 LIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIANNWIPNTGINFLLTTLCAFLLFLGAVAK 240
Cdd:PRK07376 161 LVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLA 320
Cdd:PRK07376 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 321 YSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSMEPLVGYSPDKSQNMILMGGLRKYVPITRTTFLC 400
Cdd:PRK07376 321 YSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLI 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 401 GTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGHLRvhfknysstkegslysislwg 480
Cdd:PRK07376 401 GCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEGEFR--------------------- 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 481 ksipkGVN---RDFVLstTKSGVSFFSQNIPKIPDNTRNKIGSfstpfgakntfvyPHETGNTMLFPLLILLILTLFIGF 557
Cdd:PRK07376 460 -----GNDkelQKELL--AAADAPGHHEGHHEEHGEHHHHSGS-------------PHESPWTMTLPLVVLAVPSVLIGL 519
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 558 IGIHFDNRvkdngiseltiLSKWLTPSINFFQESSNSSINsyEFLTNAISSVSLAIFGLFIAYIFYgsaysffqnlnfln 637
Cdd:PRK07376 520 LGTPWNNR-----------FEAFLHAPGEALEAAAHFEWG--EFLILAGASVGIALIGITLASLMY-------------- 572
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 638 SLVKGNPKKFflDEVKKNIYSWSYNRGYIDVFYTRVFILGIRQLTELTNFFDKGVIDGITNGVGLAGFCIGEEIKYVGGG 717
Cdd:PRK07376 573 LLKKIDPAAI--AERFPPLYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLVTLGSGEGLKYFENG 650
|
730 740
....*....|....*....|
gi 1919568534 718 RISSYLFFFLCYVSLFISFF 737
Cdd:PRK07376 651 RAQFYALIVFGAVLGLVIVF 670
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
5-727 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 565.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 5 YQYAWVIPLLPLpvimsmgFGLFLIPTATKNLRRIWAF-PSVLLLSIAMVFSVHLSIQQINGSsIYQYLWSWTINNDFSL 83
Cdd:COG1009 1 LQLLWLIPLLPL-------LGALLAGLLGRRLGRRAAGwLAALAPLAAFVLSLLLFPAVLGGE-VVVELYTWIPVGSLGL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 84 EFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIG 163
Cdd:COG1009 73 DFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 164 FWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFkianNWIPnTGINFLLTTLCAFLLFLGAVAKSAQ 243
Cdd:COG1009 153 FWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELL----AAAP-TILSSPLLTLILLLLLLGAFGKSAQ 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYST 323
Cdd:COG1009 228 FPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYST 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 324 MSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSMEplvgyspdkSQNMILMGGLRKYVPITRTTFLCGTL 403
Cdd:COG1009 308 VSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGAL 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 404 SLCGIPPLACFWSKDEILSNSW---LYSPFFGIIASFTAGLTAFYMFRIYLLTFDGHLRVHfknysstkegslysislwg 480
Cdd:COG1009 379 SLAGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPK------------------- 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 481 ksipkgvnrdfvlsttksgvsffsqnipkipdntrnkigsfstpfgaknTFVYPHETGNTMLFPLLILLILTLFIGFIGI 560
Cdd:COG1009 440 -------------------------------------------------TPKHPHESPWLMTLPLVVLAVLSLVLGLLLP 470
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 561 HFdnrvkdngiseltiLSKWLTPSINFFQESSnssiNSYEFLTNAISSVsLAIFGLFIAYIFYgsaysffqnlnflnsLV 640
Cdd:COG1009 471 GL--------------LEGLLAPAAVLGGELH----LAHGLLLNALPLL-LSLLGIALGYLLY---------------LK 516
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 641 KGNPKkffLDEVKKNIYSWSYNRGYIDVFYTRVFILGIRQLTELtNFFDKGVIDGITNGVGLAGFCIGEEIKYVGGGRIS 720
Cdd:COG1009 517 RPLPA---LAERLKPLYRLLANKWYFDELYDALFVKPVRALARF-LWFDRYVIDGIVNGLARLTLFSGRLLRRLQTGYLQ 592
|
....*..
gi 1919568534 721 SYLFFFL 727
Cdd:COG1009 593 FYALTIL 599
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
7-737 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 549.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 7 YAWVIPLLPLpvimsMGFGLFLIptatkNLRRIWAFPS----VLLLSIAMVFSVHLSIQ--QINGSSIYQYLWSWTINND 80
Cdd:PRK06590 4 LLWLIVLLPL-----IGALILGL-----FGRRIGEKWAhlvgTGLVGLSALLSLVVFFDflLGGGRAFSQTLWTWISVGD 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYL 160
Cdd:PRK06590 74 FDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 161 LIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIANNWIpntGINFLLTTLCAFLLFLGAVAK 240
Cdd:PRK06590 154 LIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAAPQFF---GLGWSALTLICLLLFIGAMGK 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLA 320
Cdd:PRK06590 231 SAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLA 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 321 YSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSMeplvgyspDKSQNMILMGGLRKYVPITRTTFLC 400
Cdd:PRK06590 311 YSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLI 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 401 GTLSLCGIPPLACFWSKDEILSNSW-LYSPFFGIIASFTAGLTAFYMFRIYLLTFDGHLRVHFKNysstkegslysislw 479
Cdd:PRK06590 383 GTLALIGIPPFAGFFSKDEILEAAFaNGHINLFVAGLVGAFLTAFYSFRLIFLVFHGKEKEKIHH--------------- 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 480 gksipkgvnrdfvlsttksgvsffsqnipkipdntrnkigsfstpfgakntfvyPHETGNTMLFPLLILLILTLFIGFIG 559
Cdd:PRK06590 448 ------------------------------------------------------PHESPAVMTLPLIVLAVLSVFAGALI 473
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 560 IHFDnrvkdngiseLTILskWLTPSINFFQESsnssinSYEFLTNAISSVSLAIFGLFIAYIFYGSAYSFFQNLNFLNSL 639
Cdd:PRK06590 474 VPPF----------LGVL--PLTTELAHGEAE------HHLPVWVALLPLVVALAGIALAWLLYLKKPTLPTSIAAPGRF 535
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 640 vkgnpkkffldevkknIYSWSYNRGYIDVFYTRVFILGIRQLTE-LTNFFDKGVIDGITNGVGLAGFCIGEEIKYVGGGR 718
Cdd:PRK06590 536 ----------------LYTLLRNKYYFDELYEKVFVKPGLALARlLWKDGDDGIIDGLVPNSARLVGGGSRVLRRLQTGY 599
|
730
....*....|....*....
gi 1919568534 719 ISSYLFFFLCYVSLFISFF 737
Cdd:PRK06590 600 LRHYAASMLIGAVVLLALL 618
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
44-461 |
2.53e-156 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 466.76 E-value: 2.53e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 44 SVLLLSIAMVFSVHLSIQQINGSS---IYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEG 120
Cdd:TIGR01974 33 GIGSVGLSAALSAFVFVDFFLNGEgeaFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEG 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 121 YLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLT 200
Cdd:TIGR01974 113 YSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYF 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 201 GSFEFRDLFKIANnwipntGINFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 280
Cdd:TIGR01974 193 GTLNFQEVFALAP------GAFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVART 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 281 LPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGS 360
Cdd:TIGR01974 267 SPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGA 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 361 GSIIHSMEplvgyspdKSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSW--LYSPFFGIIASFT 438
Cdd:TIGR01974 347 GSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIG 418
|
410 420
....*....|....*....|...
gi 1919568534 439 AGLTAFYMFRIYLLTFDGHLRVH 461
Cdd:TIGR01974 419 AFLTAFYSFRLIFMVFHGKERHE 441
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
63-474 |
5.64e-113 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 354.70 E-value: 5.64e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 63 INGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSS 142
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 143 NLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIANNWIPNTGIn 222
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 223 fllTTLCaFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTL 302
Cdd:MTH00210 211 ---TIIC-LLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 303 FLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSMeplvgyspDKSQNMI 382
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMR 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 383 LMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSW--LYSPFFGIIASFTAGLTAFYMFRIYLLTFDGHLRV 460
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdkYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNS 438
|
410
....*....|....
gi 1919568534 461 HFKNYSSTKEGSLY 474
Cdd:MTH00210 439 KKEVFIGVHESSWN 452
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
63-472 |
2.27e-110 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 347.83 E-value: 2.27e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 63 INGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSS 142
Cdd:MTH00020 52 FNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 143 NLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIANNwIPNTGIn 222
Cdd:MTH00020 132 NYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVVS-APSSDI- 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 223 flltTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTL 302
Cdd:MTH00020 210 ----TLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTV 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 303 FLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSMeplvgyspDKSQNMI 382
Cdd:MTH00020 286 FFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHAL--------SDEQDMR 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 383 LMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSW--LYSPFFGIIASFTAGLTAFYMFRIYLLTFDGHLRV 460
Cdd:MTH00020 358 KMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFgqYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNL 437
|
410
....*....|..
gi 1919568534 461 HFKNYSSTKEGS 472
Cdd:MTH00020 438 KKAVFFHLHEGD 449
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
448-689 |
1.42e-99 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 306.85 E-value: 1.42e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 448 RIYLLTFDGHLRVHFKNYSSTKEGSLYSISLWGKSIPKGVNRDFVL-----STTKSGVSFFSQNIPKIPDNTRNKIGSF- 521
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTlllltMNNNEKVSFFSKKTYRIDGNVRNMTRPFi 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 522 -STPFGAKNTFVYPHETGNTMLFPLLILLILTLFIGFIGIHFDNRVKDngiseLTILSKWLTPSINFFQESSNSSINSYE 600
Cdd:pfam01010 81 tITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGID-----LDILSKWLTPSINLLHKNSNNSVDWYE 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 601 FLTNAISSVSLAIFGLFIAYIFYGSAYSFFQNLNFLNSLVKGNPKKFFLDEVKKNIYSWSYNRGYIDVFYTRVFILGIRQ 680
Cdd:pfam01010 156 FVTNAIFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRG 235
|
....*....
gi 1919568534 681 LTELTNFFD 689
Cdd:pfam01010 236 LAELTHFFD 244
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
10-460 |
1.51e-91 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 298.02 E-value: 1.51e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 10 VIPLLPLPVIMSMGFGLFLIPTATKnlrriWAFPSVLLLSIAMVFSVHLSIQQingssiyqyLWSWTINNDFSLEFGYLI 89
Cdd:MTH00211 12 ILILLLLPLLLPLNNSKLHIKKAVK-----LSFFISLIPLLIFLDQGLETILT---------NWSWINLGLFSLNLSFKF 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 90 DPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRP 169
Cdd:MTH00211 78 DFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 170 IAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFkiannwipntgINFLLTTLCAFLLFLGAVAKSAQFPLHVW 249
Cdd:MTH00211 158 DANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLF-----------ILNLDLTLFLLGLLLAAMGKSAQFGFHPW 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 250 LPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGY 329
Cdd:MTH00211 227 LPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGL 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 330 MMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSMeplvgyspDKSQNMILMGGLRKYVPITRTTFLCGTLSLCGIP 409
Cdd:MTH00211 307 MMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFP 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 1919568534 410 PLACFWSKDEILSNswLYSPFFGIIASFTA----GLTAFYMFRIYLLTFDGHLRV 460
Cdd:MTH00211 379 FLSGFFSKDLILES--MNGSYLNAWALLLTllatSLTAAYSFRLIFLSLGGYPRF 431
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
141-440 |
7.23e-87 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 275.35 E-value: 7.23e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 141 SSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIANNwipntG 220
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTG-----G 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 221 INFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-ISLPLIMSFISLVG 298
Cdd:pfam00361 76 LNSSGLLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 299 TVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSIIHSMEplvgysp 375
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1919568534 376 dKSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAG 440
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
10-421 |
6.96e-85 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 282.23 E-value: 6.96e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 10 VIPLLPLPVIMSMGFGLFLIPTATKNLRRIWAFPSVLLLSIAMVFSVhlsiqQINGSSIYQYLWSWTINNDFSLEFGYLI 89
Cdd:MTH00032 4 LVLLLPFINAFLLGFFGRLIGTIGSGILSTICMGSSTLIALFLAYEV-----LINDAVVHIELYKWIESEIFITHIGLLY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 90 DPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRP 169
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 170 IAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEF---------RDLFKIANNWIPNTGINFLLTTLCAFLLFLGAVAK 240
Cdd:MTH00032 159 QANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFltfnggsvgSGIMDRGYYGGGAYESPLAPFAIIGILLLIGCIGK 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLA 320
Cdd:MTH00032 239 SAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 321 YSTMSQLGYMMLALGI-GSYQAALFHLITHAYSKALLFLGSGSIIHSMEPlvgyspdKSQNMILMGGLRKYVPITRTTFL 399
Cdd:MTH00032 319 YSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-------DEQDMRKMGGLIHSIPFTYTMML 391
|
410 420
....*....|....*....|..
gi 1919568534 400 CGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00032 392 IGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
6-456 |
7.43e-81 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 269.86 E-value: 7.43e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 6 QYAWVIPLLPLpvimsMGfGLFLIPTATKNLRRIWAFPS----VLLLSIAMVFSVhLSIQQINGSSIYQYLWSWTINNDF 81
Cdd:PRK07390 7 QTSWLIPLYGL-----IG-ALLSLPWSPGIIRRTGPRPAaylnLLMTLLAFVHSL-LALRAIWNQPPQQLSFPWLQVADL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 82 SLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLL 161
Cdd:PRK07390 80 DLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 162 IGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFkianNWIPNTGINFLLTTLCAFLLFLGAVAKS 241
Cdd:PRK07390 160 VGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLA----AWAATANLDPLTATLLGLALIAGPTGKC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 242 AQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAY 321
Cdd:PRK07390 236 AQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSY 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 322 STMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSmeplvgyspDKSQNMILMGGLRKYVPITRTTFLCG 401
Cdd:PRK07390 315 STSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT---------TITQDLTELGGLWSRMPATTLAFLVG 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 1919568534 402 TLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDG 456
Cdd:PRK07390 386 SAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLG 440
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
73-461 |
1.75e-79 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 265.87 E-value: 1.75e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 73 WSWTINNDFSLEFGYLIDPLtSIMLI---LITTVGILVliYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYF 149
Cdd:MTH00004 66 WPWIFTTTFNIPISFKLDQY-SLMFLpiaLFVTWSILE--FSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFI 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 150 FWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILgffWL---TGSFEFRDLFkiannwIPNTginflLT 226
Cdd:MTH00004 143 GWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMA---WLamtLNTWEIQQLF------SPTQ-----TP 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 227 TLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGA 306
Cdd:MTH00004 209 TLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAA 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 307 TLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSMeplvgyspDKSQNMILMGG 386
Cdd:MTH00004 289 TCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGG 360
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1919568534 387 LRKYVPITRTTFLCGTLSLCGIPPLACFWSKD---EILSNSWLYSpfFGIIASFTA-GLTAFYMFRIYLLTFDGHLRVH 461
Cdd:MTH00004 361 LQKTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNA--WALLLTLLAtSFTAAYSLRMILLVQTGFPRTP 437
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
42-454 |
9.70e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 262.21 E-value: 9.70e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 42 FPSVLLLSIAMVFSVHLSIQQINGS-SIYQYLWSWTINNDFSLEFGYLIDpltsIMLILITTVGILV----LIYSDDYMS 116
Cdd:MTH00208 57 FSISLLKTLAFLSLINLLIWILLGCpNINISLSNWLSNTLFNFSLSFIFD----FYFILFFSVALFVtwsiIEFSHYYMS 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 117 HDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGF 196
Cdd:MTH00208 133 NDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLS 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 197 FWLTGSFEFRDLFKIANNwiPNTGINFLLttlcaFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFL 276
Cdd:MTH00208 213 LINFNSWNLNEILSLNNS--NSFLINILL-----FGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 277 VARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALL 356
Cdd:MTH00208 286 LIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAML 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 357 FLGSGSIIHSMeplvgyspDKSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSwLYSP--FFGII 434
Cdd:MTH00208 366 FLCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAG-LASIsnLLSII 436
|
410 420
....*....|....*....|.
gi 1919568534 435 ASFTAGL-TAFYMFRIYLLTF 454
Cdd:MTH00208 437 LALIATLlTAVYSFRIIFFCF 457
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
73-449 |
2.51e-77 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 260.23 E-value: 2.51e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 73 WSWTINNDFSLEFGYLIDpLTSIMLI---LITTVGILVliYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYF 149
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFD-QYSIIFLpiaLFVTWSILE--FAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFI 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 150 FWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLllgILGFFWL---TGSFEFRDLFKIANNWIPntginFLLT 226
Cdd:MTH00066 141 GWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGL---ILSMAWLamnTNSWELQQIFLLNDNSTL-----PLLG 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 227 tlcaflLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGA 306
Cdd:MTH00066 213 ------LILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 307 TLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSMeplvgyspDKSQNMILMGG 386
Cdd:MTH00066 287 ACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGG 358
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1919568534 387 LRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILS-------NSWlySPFFGIIA-SFtaglTAFYMFRI 449
Cdd:MTH00066 359 LQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEamntsnlNSW--ALILTLIAtSF----TAVYSFRI 423
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
11-450 |
2.46e-75 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 249.68 E-value: 2.46e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 11 IPLLPLPVIMSMgFGLFLIPTATKNLRRIWAFpSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTinndFSLEFGYLID 90
Cdd:COG0651 2 SHLLILPVLLPL-LAAALLLLLGRRRRLQRAL-SLLASLALLALALALLLQVLAGGPLVYALGGWP----APFGIVLVAD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 91 PLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPi 170
Cdd:COG0651 76 RLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 171 AASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIAnnwipnTGINFLLTTLCAFLLFLGAVAKSAQFPLHVWL 250
Cdd:COG0651 155 ALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHFWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 251 PDAM-EGPTPISALIHAAtMVAAGIFLVARLLPLFIS---LPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQ 326
Cdd:COG0651 229 PDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLFGadpALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 327 LGYMMLALGIGSYQ---AALFHLITHAYSKALLFLGSGSIIHSMeplvgyspdKSQNMILMGGLRKYVPITRTTFLCGTL 403
Cdd:COG0651 308 IGYILLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGAL 378
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1919568534 404 SLCGIPPLACFWSKDEILSNSWLYSPFFGIIAS-FTAGLTAFYMFRIY 450
Cdd:COG0651 379 ALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLlLSSLLTLAYFVRIF 426
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-464 |
3.28e-74 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 255.61 E-value: 3.28e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 80 DFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSY 159
Cdd:PRK12647 53 SLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 160 LLIGFWFTRPIA-ASACQKAFVTNrVGDFGLLLGILGFFWLTGSFEFRDLFKiANNWIpnTGINFLLTTLcaFLLFLGAV 238
Cdd:PRK12647 133 LLIGFNHEREAArRAALQALLVTG-GGGLALLAGLILLGNVTGTYSLSELLA-SGDVI--REHPLYLAIL--LLVLGGAF 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 239 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRS 318
Cdd:PRK12647 207 TKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLI 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 319 LAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLGSGSIIHSmeplVGyspdkSQNMILMGGLRKYVPITR 395
Cdd:PRK12647 287 LAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG-----TRDITKLGGLRRAMPITA 357
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1919568534 396 TTFLCGTLSLCGIPPLACFWSKDEI---LSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGHLRVHFKN 464
Cdd:PRK12647 358 AAALLAALSMAGLPPLFGFLAKELIyeaLLEAPLWSLILTVAAVLGNALMVAVAFLVGIKPFLGKLVETPKH 429
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
114-459 |
9.32e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 248.21 E-value: 9.32e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 114 YMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLllgI 193
Cdd:MTH00137 111 YMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---I 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 194 LGFFWL---TGSFEFRDLFKIANNwipntginfLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMV 270
Cdd:MTH00137 188 LAMAWMatnLNSWEIQQIFALSKD---------FDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 271 AAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHA 350
Cdd:MTH00137 259 VAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHA 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 351 YSKALLFLGSGSIIHSMeplvgyspDKSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEI---LSNSWL- 426
Cdd:MTH00137 339 FFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLn 410
|
330 340 350
....*....|....*....|....*....|....*
gi 1919568534 427 -YSPFFGIIA-SFtaglTAFYMFRIYLLTFDGHLR 459
Cdd:MTH00137 411 aWALTLTLIAtSF----TAVYSLRVVFFVSMGHPR 441
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
114-459 |
1.06e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 242.45 E-value: 1.06e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 114 YMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGI 193
Cdd:MTH00108 107 YMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAM 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 194 LGFFWLTGSFEFRDLFKIANNwipntginflLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 273
Cdd:MTH00108 187 AWFLLNLNSWDLQQIFMLNPN----------NSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAG 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 274 IFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSK 353
Cdd:MTH00108 257 VFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFK 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 354 ALLFLGSGSIIHSMeplvgyspDKSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEIL-------SNSWL 426
Cdd:MTH00108 337 AMLFMCSGSIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIeaantsyTNAWA 408
|
330 340 350
....*....|....*....|....*....|...
gi 1919568534 427 YSpfFGIIASftaGLTAFYMFRIYLLTFDGHLR 459
Cdd:MTH00108 409 LL--ITLIAT---SLTAAYSTRIIFFALLGQPR 436
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
27-459 |
1.34e-70 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 246.38 E-value: 1.34e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 27 FLIPTATKNLRRIWAFPSVLLLSIAMV--FSVHLSIQQINGSSIYQYLWSWTINNDFSLefgyLIDPLTSIMLILITTVG 104
Cdd:PRK12645 16 LLIPFLYKYFKRIHTGWFVLPVPVVLFiyFLSLIPTTMSGNTVMKTLPWIPSLGINFTL----YVDGLSLLFALLITGIG 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 105 ILVLIYSDDYMS-HDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNR 183
Cdd:PRK12645 92 SLVVLYSIYYLSkKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 184 VGDFGLLLGILGFFWLTGSFEFRDLFKIANNWIPNTginflLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISAL 263
Cdd:PRK12645 172 FGGLSMLGGFILLYIMTGSFSIREMIANADEIQNSP-----LFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAY 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 264 IHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS----Y 339
Cdd:PRK12645 247 LHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAaslhY 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 340 Q------------AALFHLITHAYSKALLFLGSGSIIHSmeplVGyspdkSQNMILMGGLRKYVPITRTTFLCGTLSLCG 407
Cdd:PRK12645 327 QgddskiyaaaitAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGLMTIMPITFTIALIGALSMAG 397
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1919568534 408 IPPLACFWSKDEIL------SNSWLYS--------PFFGIIASFtagLTAFYMFRIYLLTFDGHLR 459
Cdd:PRK12645 398 LPPFNGFLSKEMFFesmlnaTEANLFSldtwgvlfPVIAWVASV---FTFVYSIIFIFKTFFGKYK 460
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
24-434 |
4.43e-68 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 231.79 E-value: 4.43e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 24 FGLFLIPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWtinNDFSLeFGYLIDPLTSIMLILITTV 103
Cdd:PRK06525 12 FIGALVVFFLPGRRAAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNL---GDVAL-FGLVIDPVSVLIGFVVVLL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 104 GILVLIYSDDYMS-------HDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTrPIAASACQ 176
Cdd:PRK06525 88 GLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PKALRSAL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 177 KAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIANNwipntginflLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEG 256
Cdd:PRK06525 167 KALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGS----------LKYLVFLGILFAAWGKSAQLPFYSWLPDAMEA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 257 PTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFI-SLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALG 335
Cdd:PRK06525 237 PTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVgAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLS 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 336 IGSY------QAALFHLITHAYSKALLFLGSGSIIHSMeplvgyspdKSQNMILMGGLRKYVPITRTTFLCGTLSLCGIP 409
Cdd:PRK06525 317 LAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVP 387
|
410 420
....*....|....*....|....*
gi 1919568534 410 PLACFWSKDEILSNSWLYSPFFGII 434
Cdd:PRK06525 388 PFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
81-450 |
5.00e-67 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 236.28 E-value: 5.00e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYL 160
Cdd:TIGR00940 65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 161 LIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIANNWIPNTginFLLTTLcaFLLFLGAVAK 240
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIRNSP---LFGTAM--VLVLLGAFTK 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLA 320
Cdd:TIGR00940 220 SAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 321 YSTMSQLGYMMLALGIGS----------------YQAALFHLITHAYSKALLFLGSGSIIHSmeplvgyspDKSQNMILM 384
Cdd:TIGR00940 300 FSTISQLGLIMVLLGLGSpsyhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKL 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 385 GGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILS-------------NSWLY-SPFFGIIAS-FTAGLTAFYMFRI 449
Cdd:TIGR00940 371 GGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAeaitahlvnpfdtVTLGYlFPYVATVASvFTFVYSLRFIHGV 450
|
.
gi 1919568534 450 Y 450
Cdd:TIGR00940 451 F 451
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
10-417 |
6.39e-66 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 235.47 E-value: 6.39e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 10 VIPLLPLpvimsmgFGLFLIPTATKNLRRI--WAFPSVLLLSIAMVFSVHlsiQQINGSSIYQYLWSW--TINNDFSLEf 85
Cdd:PRK12648 5 LLVLLPF-------LGALLAALLPRNARNAeaWLAGLVALAALVLLALLY---PAVAAGEVIRAEIEWlpALGLNLSLR- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 86 gylIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFW 165
Cdd:PRK12648 74 ---LDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 166 FTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEF------RDLFKiANNWIPntginfllTTLCafLLFLGAVA 239
Cdd:PRK12648 151 HHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLdvvlaaGDLIR-AHPLYP--------PALV--LILLGAFT 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSL 319
Cdd:PRK12648 220 KSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLL 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 320 AYSTMSQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFLGSGSIIHSMeplvgyspdKSQNMILMGGLRKYVPITRT 396
Cdd:PRK12648 300 AYSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHET---------GTRDMRRLSGLRRLMPITAT 370
|
410 420
....*....|....*....|.
gi 1919568534 397 TFLCGTLSLCGIPPLACFWSK 417
Cdd:PRK12648 371 LAMVAAAAMAGVPLLNGFLSK 391
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
73-417 |
7.83e-62 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 224.03 E-value: 7.83e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 73 WSWTinNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYL-RFFVYISFFNTSMLGLVTSSNLIQIYFFW 151
Cdd:PRK12644 58 VPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYVFW 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 152 ELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLfkIANNWipnTGinfLLTTLCAF 231
Cdd:PRK12644 136 ELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSEL--LADPP---TG---PAVSVAVV 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 232 LLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALA 311
Cdd:PRK12644 208 LILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALR 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 312 QRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHL---ITHAYSKALLFLGSGSIIHSmeplVGyspdkSQNMILMGGLR 388
Cdd:PRK12644 288 QHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TG-----TRDIRKLSGLG 358
|
330 340
....*....|....*....|....*....
gi 1919568534 389 KYVPITRTTFLCGTLSLCGIPPLACFWSK 417
Cdd:PRK12644 359 RRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
83-418 |
1.65e-61 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 220.86 E-value: 1.65e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 83 LEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLI 162
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 163 GFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIANNWIPNTGINFLLTTLcaFLLFLGAVAKSA 242
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITL--ILIFIGAAAKSA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 243 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYS 322
Cdd:PRK12649 230 QGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 323 TMSQLGYMMLALGIGSYQ-------AALFHLITHAYSKALLFLGSGSIIHSMeplvgyspdKSQNMILMGGLRKYVPITR 395
Cdd:PRK12649 310 TISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEA---------ATRDIRKLGGLRKEMPITF 380
|
330 340
....*....|....*....|...
gi 1919568534 396 TTFLCGTLSLCGIPPLACFWSKD 418
Cdd:PRK12649 381 IVASIAALAMAGIPPLNGFLSKE 403
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
45-472 |
3.69e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 207.19 E-value: 3.69e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 45 VLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRF 124
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 125 FVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPiAASACQKAFVTNRVGDFGLLLGILGFFWLtgsfe 204
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILSIAWMLMH----- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 205 frdlfkiaNNW-IPNTGINFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 283
Cdd:MTH00209 160 --------GNWnIFYLNFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPS 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 284 FISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSI 363
Cdd:MTH00209 232 LFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 364 IHSMEplvgyspdKSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILsNSWLYSPFFGIIAS---FTAG 440
Cdd:MTH00209 312 IHSHG--------HSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESNMPIMTLIlmfLSTS 382
|
410 420 430
....*....|....*....|....*....|..
gi 1919568534 441 LTAFYMFRIYLLTFDGhlRVHFKNYSSTKEGS 472
Cdd:MTH00209 383 LTAAYSMRLSYFSLWG--PNSSKSLNSSFDQN 412
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
83-418 |
3.53e-57 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 208.84 E-value: 3.53e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 83 LEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYL-RFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLL 161
Cdd:PRK12646 70 INLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 162 IGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIANNwIPNTGinflLTTLCAFLLFLGAVAKS 241
Cdd:PRK12646 150 ISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADH-IKNHG----LFIPMIFMFLLGAFTKS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 242 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAY 321
Cdd:PRK12646 225 AQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAY 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 322 STMSQLGYMMLALGIG-----------------SYQAALFHLITHAYSKALLFLGSGSIIHSMeplvgyspdKSQNMILM 384
Cdd:PRK12646 305 STISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEA---------GTRDIRIL 375
|
330 340 350
....*....|....*....|....*....|....
gi 1919568534 385 GGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKD 418
Cdd:PRK12646 376 SGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKE 409
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
44-474 |
3.93e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 195.83 E-value: 3.93e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 44 SVLLLSIAMVFSVHLSIQQINGSSiyqYLWSWTINNDFSLEFGY--LIDPLTSIMLILITTVGILVLIYSDDYMSHDEGY 121
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGIS---LIFEWELLSVSSCSFSFelVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 122 LRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFvTNRVGDfGLLLGILGFFWLTG 201
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGD-VLILLSIALLVLLG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 202 SFEFrdlfkiannwipNTGINFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 281
Cdd:MTH00151 163 HWSI------------LSMWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 282 PLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSG 361
Cdd:MTH00151 231 PFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAG 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 362 SIIHSMeplvgyspDKSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSwLYSP---FFGIIASFT 438
Cdd:MTH00151 311 SIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESS-LMSPtslLMVLLMFVG 381
|
410 420 430
....*....|....*....|....*....|....*.
gi 1919568534 439 AGLTAFYMFRIYLLTFDGHLrvHFKNYSSTKEGSLY 474
Cdd:MTH00151 382 VGLTALYSARLSFCLVWGSM--KSSSLSSKSDEDFY 415
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
44-451 |
5.36e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 195.75 E-value: 5.36e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 44 SVLLLSIA-MVFSVHLSIQQINgssiYQYLWSWTINNDFS--LEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEG 120
Cdd:MTH00207 11 SYLLWFMSiLMFPLSLYLMMCN----KTILIEWEIFTISSspINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKF 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 121 YLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIgFWFTRPIAASACQKAFVTNRVGDFGLLLGIlgffwlt 200
Cdd:MTH00207 87 LSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSI------- 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 201 GSFEFRDLFKIANNWIPNtginflLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 280
Cdd:MTH00207 159 GWTLNQGHWSITNMWQTD------MNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRF 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 281 LPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGS 360
Cdd:MTH00207 233 YPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCA 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 361 GSIIHSMEplvgyspdKSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSwLYSPFFGIIAS---F 437
Cdd:MTH00207 313 GSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESS-LFYPHNSLMILmifL 383
|
410
....*....|....
gi 1919568534 438 TAGLTAFYMFRIYL 451
Cdd:MTH00207 384 ATALTAAYSTRFTL 397
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-456 |
2.90e-53 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 192.62 E-value: 2.90e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 9 WVIPLLPLPVIMSMgFGLFLIPT---ATKNLRRIWAfpsVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTINN------ 79
Cdd:PRK08376 2 LGEHLPPLLIIIPL-FGAFSMPIvslLGGKAREIWA---VLISFLTLIVALLVFYEVWNNGTIVYVLGAESPTLtlpfgs 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 80 -DFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCS 158
Cdd:PRK08376 78 gGFPIRIIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIAS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 159 YLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILgffWLTGSFEFRDLFKIANNWIPNTGInfllTTLCAFLLFLGAV 238
Cdd:PRK08376 158 YALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIA---LLYGQYGTLNMAYLAVKMSENPTV----VAKIALALFIAGL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 239 A-KSAQFPLHVWLPDAM-EGPTPISALIHAATmvAAGIFLVAR-LLPLF---ISLPLIMSFISLVGTVTLFLGATLALAQ 312
Cdd:PRK08376 231 AmKSGAVPVHMWLPDAYpAAPSSISAMLLVIK--QAGLYALARvLFSIYgpaINLATVGWVIIILGCLTMFVGVAMAVVQ 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 313 RDIKRSLAYSTMSQLGYMMLALGIG---------------SYQAALFHLITHAYSKALLFLGSGSIIHSMeplvgyspdK 377
Cdd:PRK08376 309 KDVKRLLAYHSVSQIGYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYET---------G 379
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1919568534 378 SQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDG 456
Cdd:PRK08376 380 TRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
15-456 |
1.58e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 190.57 E-value: 1.58e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 15 PLPVIMSmgFGLFLIPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSwtinnDFSLEFG--YLIDPL 92
Cdd:PRK12667 11 ILLVLFA--FLLPLLSILLKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPIVYLFG-----GWPAPIGivYEVDLL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 93 TSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAA 172
Cdd:PRK12667 84 GALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAV 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 173 SACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDL-FKIANNWIPNTGI---NFLLTTLCAFLLFLGAVA-KSAQFPLH 247
Cdd:PRK12667 164 EAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLsAKIRGLSFPLTGGlagNPPLALGVALALALWAFTiKAAIFPNH 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 248 VWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL-------PLFISLPLIMSFISLV-GTVTLFLGATLALAQRDIKRS 318
Cdd:PRK12667 244 FWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIIlGAVSAIIGALMMVVQKDVKRL 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 319 LAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLGSGSIIHSMeplvgyspdKSQNMILMGGLRKYVPITR 395
Cdd:PRK12667 323 LAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGRKMPIAS 393
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1919568534 396 TTFLCGTLSLCGIPPLACFWSKdEILSNSWLYS--PFFGIIASFTAGLTAFYMFRIYLLTFDG 456
Cdd:PRK12667 394 FAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
24-480 |
5.34e-52 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 195.26 E-value: 5.34e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 24 FGLFLIPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSI-YQYLWSWTI-NNDFSLEFGYLIDPLTSIMLILIT 101
Cdd:PRK12650 10 LAVVLAPPLVRVLDRKAGWPLAAIFVAAAGLLLKELPPILDGDALtWSVTWIPDLlGNGVDVNLALRADALSLFFALLAL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 102 TVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFwfTRPIAASACQKAFVT 181
Cdd:PRK12650 90 VIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSGGEAGSIRTLIL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 182 NRVGDFGLLLGILGFFWLTGSFEFRDLFKiANNWIPNTGinflLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPIS 261
Cdd:PRK12650 168 TFFGGLTLLAAVAIAATQTGTTSLSGILH-SDVWAEKPG----LTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVS 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 262 ALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS--- 338
Cdd:PRK12650 243 AFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTpfa 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 339 YQAALFHLITHAYSKALLFLGSGSIIHSMeplvgyspdKSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKD 418
Cdd:PRK12650 323 LTAAVVHTLAHALFKSSLFMLIGVVDHQA---------GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKE 393
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 419 EILSnSWLYSPF--FGIIA-SFTAGLTAFYMF----RIYLLTF-DGHlrvhfKNYSSTKEGSLysiSLWG 480
Cdd:PRK12650 394 GMLT-AFLEAPGgnAGVVLlLVGAALGAVFTFaysaRLVLGAFvDGP-----RDMSHVKEAPV---SLWL 454
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
106-635 |
7.05e-52 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 189.58 E-value: 7.05e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 106 LVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIgFWFTRPIAASACQKAFVTNRVG 185
Cdd:MTH00165 69 MVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIG 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 186 DFGLLLGIlGFFWLTGSFEFrdlfkIANNWIPNTGINFLLTTlcaFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIH 265
Cdd:MTH00165 148 DVAILLSI-AWMMNFGSWNF-----IFYLDFMKNSFEMLLIG---LLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVH 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 266 AATMVAAGIFLVARLLPLFISlPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFH 345
Cdd:MTH00165 219 SSTLVTAGVYLLIRFNNLLFS-SFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFH 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 346 LITHAYSKALLFLGSGSIIHSMeplvgyspDKSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKD---EILS 422
Cdd:MTH00165 298 LLTHALFKALLFLCAGSIIHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVS 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 423 NSWLySPFFGIIASFTAGLTAFYMFRIYLLTFDGHLrVHFKNYSSTKEGSLYSISLWGKSIPKGVnrdfvlsttksGVSF 502
Cdd:MTH00165 370 MSNL-NFFIFFLFFFSTGLTVSYSFRLIYYSMSGDF-NLKSLNNLSDESKFMLKSMILLLFMSIF-----------GGSM 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 503 FSQNIpkipdntrnkigsFSTPFgakntFVYpheTGNTMLFPLLILLILTLFIGFIGIHFDNRVKDNGISELTIL----S 578
Cdd:MTH00165 437 LSWLI-------------FPEPY-----MIC---LPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLKNYKLSsflgS 495
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 579 KWLTPSINFFQeSSNSSINSYEFLTNAISSVSLAIFG---LFIAYIFYGSAYSFFQNLNF 635
Cdd:MTH00165 496 MWFMPFLSTYG-ISYYPLNLGSLSLKSFDQGWSEYFGgqgLYNFLKKLSKLIQWLQNNNL 554
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
16-465 |
1.81e-51 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 186.44 E-value: 1.81e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 16 LPVIMsmGFGLFLIPTATKNLRRIWAFpsvLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSI 95
Cdd:COG1008 12 LPLLG--ALLLLLLPRRNARLARWVAL---AVSLLTLLLSLYLLAGFDPGTGGFQFVESYPWIPSLGISYHLGVDGISLP 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 96 MLILITTVGILVLIYSDDYMSHDEGylRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFW-FTRPIAASA 174
Cdd:COG1008 87 LVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWgGERRIYAAI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 175 cqKAFVTNRVGDFGLLLGILGFFWLTGSFEFrDLFKIANnwipnTGINFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDA- 253
Cdd:COG1008 165 --KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAA-----APLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAh 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 254 MEGPTPISAlIHAATMVAAGIFLVARL-LPLFislPLIMS----FISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLG 328
Cdd:COG1008 237 VEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PEASAyfapLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 329 YMMLALGIGSYQA---ALFHLITHAYSKALLFLGSGSIIHSMeplvgyspdKSQNMILMGGLRKYVPITRTTFLCGTLSL 405
Cdd:COG1008 313 FVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLAALAS 383
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 406 CGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGHLRVHFKNY 465
Cdd:COG1008 384 LGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAEL 443
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-449 |
7.02e-46 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 170.83 E-value: 7.02e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 13 LLPLPVIMSMGFGLF-LIPTATKNLRRIWAF-PSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTInndfslefGYLID 90
Cdd:PRK08375 5 LLPLLVAVPLLAAALiVLLPKRRRLRWALALlVAALTFALAISLLPQVLDGGVIAYVVGGWPPGIGI--------ELRAD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 91 PLTSIMLILITTVGILVLIYSDDYMSHDEGylRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPi 170
Cdd:PRK08375 77 SLSALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 171 AASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIANnwipntGINFLLTTLcaFLLFLGAVAKSAQFPLHVWL 250
Cdd:PRK08375 154 ALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF--GFVLLALALKAAVFPLHTWL 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 251 PDAMEGPTPISALIHAATMVAAGIFLVARLL-----PLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMS 325
Cdd:PRK08375 226 PRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVS 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 326 QLGYMMLALGIGSY---QAALFHLITHAYSKALLFLGSGSIihsmeplvgYSPDKSQNMILMGGLRKYVPITRTTFLCGT 402
Cdd:PRK08375 306 QMGYILLGLALLTPlalAAGLLHLLHHALMKGALFLAAGAI---------EVTYGTRRLSELSGLGRRMPLTAAAFAVAS 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1919568534 403 LSLCGIPPLACFWSKDEILS-----NSWLYSPFFgIIASFtagLTAFYMFRI 449
Cdd:PRK08375 377 LSLIGVPPTSGFVSKWYLVVgaveaGQWLVLAVL-LASSL---LALLYFLRI 424
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
89-459 |
4.72e-40 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 156.97 E-value: 4.72e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 89 IDPLTSIMLILITTVGILVLIYSDDYMSHDEGylRFFVYISFFN----TSMLGLVTSSNLIQIYFFWELVGMCSYLLIGF 164
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEG--KGPGAMGFFYnlflASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 165 WFTRPIAASACQKAFVTNRVGDFGLLLGilgfFWL----TGSFEFrDLFKIANnwiPNTGINFLlttlcAFLL-FLGAVA 239
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLA----FGLlareSGSYDF-AAMRAAH---LSPFWASL-----VFLLaLFGFGA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 240 KSAQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFISLP------LIMSFislvGTVTLFLGATLALAQ 312
Cdd:PRK06521 223 KAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPgwwwgvLVLAL----GAISAVLGVLYALAE 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 313 RDIKRSLAYSTMSQLGYMMLALGIG----SYQ----------AALFHLITHAYSKALLFLGSGSIIHSMEplvgyspdkS 378
Cdd:PRK06521 298 HDLKRLLAYSTIENIGIIFVGLGLAmvfiAYGmpllaalaltAALYHLLNHALFKSLLFLGAGAVLHATG---------T 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 379 QNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSK----DEILSNSWLYSPFFGIIA-------SFTAGLTAFYMF 447
Cdd:PRK06521 369 RDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEwlllQSLLSSPGLPQWGLKLAVpiaaamlALTAALAAMCFV 448
|
410
....*....|..
gi 1919568534 448 RIYLLTFDGHLR 459
Cdd:PRK06521 449 KFYGITFLGRPR 460
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
11-449 |
5.57e-40 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 153.73 E-value: 5.57e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 11 IPLLPLPVIMSMGFGLFLIPTATKNLRRIWAFP-SVLLLSIAMVFSVhlsiqqingssiyqylwsWTINNDFSLEFG--Y 87
Cdd:COG1007 5 LALLPEIILLLGALVLLLLDLFLPRRSRRLLAGlALLGLLLALALLL------------------LALGGGTGTAFGgmF 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 88 LIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTS-MLGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 166
Cdd:COG1007 67 VVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFRR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 167 TRPIAASACQKAFVTnrvGDFG---LLLGILGFFWLTGSFEFRDLFK-IANNWIPNTGInfllttLCAFLLFLGAVA-KS 241
Cdd:COG1007 147 DDRRSSEAALKYFLL---GALSsgfLLYGISLLYGATGSLNLAGIAAaLAAGGANSPLL------LLGLVLVLAGLAfKL 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 242 AQFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL-----PLFISLPLIMSFISLVgtvTLFLGATLALAQRDI 315
Cdd:COG1007 218 SAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveafpGLAADWQLLLAVLAVL---SMTVGNLAALAQTNV 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 316 KRSLAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFlgsGSIIhsmepLVGYSPDKSQNMILMGGLRKYVP 392
Cdd:COG1007 294 KRMLAYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAF---AVIL-----LLSRKGGEAEEIEDLAGLARRSP 365
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 393 ITRTTFLCGTLSLCGIPPLACFWSKDEILSNSW---LYspFFGIIASFTAGLTAFYMFRI 449
Cdd:COG1007 366 LLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-364 |
9.47e-40 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 153.70 E-value: 9.47e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 10 VIPLLPlPVIMSMGFG-LFLIPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIqqingssiyqyLWSWTINNDFSLefgyl 88
Cdd:PRK08168 5 VCALLP-AVLMSLAAGgLLLSRWLTRALWRIAQAASLAGLFLALLGLVLFAT-----------GAAWPAAAWLEV----- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 89 iDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTR 168
Cdd:PRK08168 68 -SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 169 PIAASACQKAFVTNRVGDfGLLLGILGFFWL-TGSFEFRDLFKIANnwipnTGINFLLTTLCAFLLFLGAVAKSAQFPLH 247
Cdd:PRK08168 147 PFARLAAHKKFIADRLAE-LLLLAAAALAYLeVGSLSLSALWAHLA-----AQGASPSLQAAALLLVLAVILKTAQLPVH 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 248 VWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQL 327
Cdd:PRK08168 221 GWLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQM 299
|
330 340 350
....*....|....*....|....*....|....*..
gi 1919568534 328 GYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSII 364
Cdd:PRK08168 300 GFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
11-477 |
5.01e-37 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 144.96 E-value: 5.01e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 11 IPLLPLPVIMSMGFGLFLIPTATKNLRRIWAFPSVLLLSIAMVFsvhlsiqqingssiyqYLWSWTINNDFSLEFGYLID 90
Cdd:PRK05777 9 ILLLPELILLGAAVVLLLIDAFVRRHSRRATLAVLALLLALVAL----------------LFVLGAAGGGTAFGGMLVVD 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 91 PLTSIMLILITTVGILVLIYSDDYMShDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPI 170
Cdd:PRK05777 73 GFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRR 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 171 AASACQKAFVtnrVGDFG---LLLGILGFFWLTGSFEFRDLFK-IANNWIPNTGINFLLTTLCAFLLF-LGAVaksaqfP 245
Cdd:PRK05777 152 SLEAAIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAGIAKaLADGSGNSLLLLFGLVFLLVGLAFkLSAV------P 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 246 LHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL-----PLFISLPLIMSFISLVgtvTLFLGATLALAQRDIKRSL 319
Cdd:PRK05777 223 FHMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLLvvafgGLSEDWQQVLAIIAIA---SMLVGNLAALSQTNIKRLL 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 320 AYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKallfLGSGSIIHSMEplvgySPDKSQNMIL-MGGLRKYVPITR 395
Cdd:PRK05777 299 AYSSIAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLR-----RKGGEAESISdFAGLSKRSPLLA 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 396 TTFLCGTLSLCGIPPLACFWSKDEILSNS------WLyspffGIIASFTAGLTAFYMFR-IYLLTFDGHLRVHFKNYSST 468
Cdd:PRK05777 370 AVMTIFMLSLAGIPPTAGFWGKFYVFEAAveaglwWL-----AVIGVLNSAIGAFYYLRvIKLMYFDEPPRDAPVNWPLS 444
|
....*....
gi 1919568534 469 KEGSLYSIS 477
Cdd:PRK05777 445 AGGAVLSVS 453
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
13-462 |
1.13e-36 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 144.31 E-value: 1.13e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 13 LLPLPVIMsmGFGLFLIPTATKNLRRIWAFPS---VLLLSIAMVFSVHLSiqqingSSIYQYLWSWTINNDFSLEFGYLI 89
Cdd:TIGR01972 4 LIFLPLIG--ALLILLLPSNKDGKARWIALVValaTLLLSLLLLFQFDPT------GSGFQFTEDIPWIPALGISYHLGV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 90 DPLTSIMLILITTVGILVLIYSDDYMSHDEGYlrFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWfTRP 169
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGP 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 170 IAASACQKAFVTNRVGDFGLLLGILGFFWLTG-SFEFRDLFkiannwipNTGINFLLTTLCAFLLFLGAVAKSAQFPLHV 248
Cdd:TIGR01972 153 NRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLELL--------NLPLPFGVQTWLFLAFFIAFAVKVPLFPLHT 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 249 WLPDAM-EGPTPISALIHAATMVAAGIFLVARLLPLF-----ISLPLIMSFislvGTVTLFLGATLALAQRDIKRSLAYS 322
Cdd:TIGR01972 225 WLPDAHvEAPTAGSVILAGVLLKMGTYGFLRFNLPLFpdaslYFAPVLAAL----GVIAIIYGALIALAQTDIKRLIAYS 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 323 TMSQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSIihsmeplvgYSPDKSQNMILMGGLRKYVPITRTTFL 399
Cdd:TIGR01972 301 SISHMGFVLLGIFSFnelGISGAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFM 371
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1919568534 400 CGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGHLRVHF 462
Cdd:TIGR01972 372 LFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPE 434
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
74-417 |
2.76e-36 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 145.14 E-value: 2.76e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 74 SWTINNDFSLEFGYLIdpLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFfnTSMLGLVTSSNLIQIYFFWEL 153
Cdd:PRK08668 54 LTLFFGGFKLTFTLTH--LSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVLGVFLANDLLTLYIFWEI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 154 VGMCSYLLIgfWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDlfkIANNWIPNTGINFLLttLCAFLL 233
Cdd:PRK08668 130 MTFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAD---ISQGLINDTSTGFAL--IVFLFL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 234 FLGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP---------LFISLPLIMSFISLVGTVT 301
Cdd:PRK08668 203 LAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtklfsefgTYRGVPLFNYILAWLGNIS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 302 LFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSIIHSMeplvgyspdKS 378
Cdd:PRK08668 283 IIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIYRT---------GT 353
|
330 340 350
....*....|....*....|....*....|....*....
gi 1919568534 379 QNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSK 417
Cdd:PRK08668 354 TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
11-459 |
3.37e-36 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 143.03 E-value: 3.37e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 11 IPLLPLPVIMSMGFGLFLIPT---ATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTINNDFSLEfgy 87
Cdd:PRK05846 3 WPLLSLLIFLPLIGGLLVLLTerfGARLARWIALIGTLLTLLLSLVLWIGFDSSNAGFQFVEKHPWIPRFGISYHLG--- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 88 lIDPLTSIMLILITTVGILVLIYSDDYMSHDEGylRFFVYISFFNTSMLGLVTSSNLIQIYFFWE--LVGMcsYLLIGFW 165
Cdd:PRK05846 80 -VDGISLLLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGVW 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 166 --FTRPIAASacqKAFVTNRVGDFGLLLGILGFFWL----TGSFEFRDLFKIAnnwIPNTGINFLlttlcaFLLFLGAVA 239
Cdd:PRK05846 155 ggKNRIYAAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNLP---LPPGVQYWL------FLAFFIAFA 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 240 -KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF-LVARLLPLFISLPLIMSFISLV-GTVTLFLGATLALAQRDIK 316
Cdd:PRK05846 223 vKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDASHEFAPIIITlGVIAIIYGALVALAQTDIK 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 317 RSLAYSTMSQLGYMMLALGIGSYQA---ALFHLITHAYSKALLFLGSGSIIHSMeplvgyspdKSQNMILMGGLRKYVPI 393
Cdd:PRK05846 303 KLIAYSSISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKVMPV 373
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1919568534 394 TRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGHLR 459
Cdd:PRK05846 374 LAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-449 |
3.08e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 137.26 E-value: 3.08e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 75 WTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHD--EGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWE 152
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 153 LVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIANNwipntginfllTTLCAFL 232
Cdd:PRK06589 147 LLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKN-----------QSIILLL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 233 LFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVG------TVTLFLGA 306
Cdd:PRK06589 216 MFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNwlifipIVSIFYSS 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 307 TLALAQRDIKRSLAYSTMSQLGYMMLALGI---GSYQAALFHLITHAYSKALLFLGSGSIihsmeplvgYSPDKSQNMIL 383
Cdd:PRK06589 296 LKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDK 366
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1919568534 384 MGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEIL-----SNSWLYSPFFGIIASFTAGLTAFYMFRI 449
Cdd:PRK06589 367 LHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
81-467 |
1.29e-33 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 135.82 E-value: 1.29e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 81 FSLEFG-YLIDPLTSIMLILITtvgILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSY 159
Cdd:MTH00095 37 LSLKFNfYFNSLLFSLILLLVT---LSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 160 LLIGFWFTRPiAASACQKAFVTNRVGDFGLLLGILGFFwLTGSFEFRDLFkiannwipntginflLTTLCAFLLFLGAVA 239
Cdd:MTH00095 114 FLVLFYNNWD-SNSGAMNTALTNRIGDFFIFLFFSGFI-FSSYYFFSFSF---------------FSSSMILMLLLTSFT 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLpLIMSFISLVGTVTLFLGATLALAQRDIKRSL 319
Cdd:MTH00095 177 KSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKKVV 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 320 AYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSM---EPLVGYSPDKSQNMILMgglrkyvpitrT 396
Cdd:MTH00095 256 ALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNfgqQDGRNYSNNGNLPMFIQ-----------L 324
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1919568534 397 TFLCGTLSLCGIPPLACFWSKDEILSNSWL--YSPFFGIIASFTAGLTAFYMFRIYLLTFDGHLRVHFKNYSS 467
Cdd:MTH00095 325 QLLVTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSS 397
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
22-437 |
2.14e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 134.31 E-value: 2.14e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 22 MGFGLFLIPTATKNLRRIWAFpsvlllsIAMVFSVHLSIQQINGSsiyqylwsWTINNDFSLEFgyLIDPLTSIMLILIT 101
Cdd:PRK07234 15 LGFAIYLLPKLDRNLALGMAI-------VSAVYALGLVASMVPLE--------LTLLDNFGVTL--RADALSGYFILTNA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 102 TVGILVLIYSddymsHDEGYLRFFvyiSFFNTSMLGLV----TSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQK 177
Cdd:PRK07234 78 LVTLAVIFYC-----WESAKTRFF---YAQLLILHGSVnaafVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRY 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 178 AFVTNRVGDFgLLLGILGFFWLTGSFEFRDLFKIAnnwipntginflltTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGP 257
Cdd:PRK07234 150 LFYSNVAMLF-YLIGAVLVYQANGTFAFSGLATAD--------------PEAFALIALGLLVKGGIFVSGLWLPLTHSEA 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 258 TPISALIHAATMVAAGIFLVARLLPLFISLPLImsfISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG 337
Cdd:PRK07234 215 EPPVSALLSGVVVKAGVFPLVRCALDVPGLDLI---VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 338 syqaALFHLiTHAYSKALLFLGSGSIihsmeplvgYSPDKSQNMILMGGLRKYVPITRTTFlcgtlSLCGIPPLACFWSK 417
Cdd:PRK07234 292 ----GLYAL-AHGLVKSTLFLCAGAL---------PSRNFTELISQMLGIGKWIPLTMASF-----SIAGFPLLAGFVSK 352
|
410 420
....*....|....*....|....*.
gi 1919568534 418 DEILSN--SW----LYSPFFGIIASF 437
Cdd:PRK07234 353 VLTLKNllPWqaiaLNLAAVGTAASF 378
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
19-432 |
3.18e-33 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 136.01 E-value: 3.18e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 19 IMSMGFGLFLIPTATK---NLRRIWAFPSVL-LLSIAMVFSVHLSIQQINGSSIYQYLWSWTINNDFSLEfgylIDPLTS 94
Cdd:PRK08667 5 LFLGAILLLLAAAVIPlvfRHKRKRVWQSVLwLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITFH----IDRLAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 95 IMLILITTVGILVLIYSDDYMSHDEGYLRFFV---YISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIA 171
Cdd:PRK08667 81 FFIILIGLVSLCVAIYSLGYNEHMSSNERANLlsaLTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEET 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 172 ASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFrdlfkiannwiPNTGINFLLTTLCAFLLFLGAVAKSAQFPLHVWLP 251
Cdd:PRK08667 161 QRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL-----------SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 252 DAMEG-PTPISALIhAATMVAAGIFLVARLLPLFISLPLIMSF-ISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGY 329
Cdd:PRK08667 230 YAHPAsPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWGVlILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGI 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 330 MMLALGIG--------------SYQAALFHLITHAYSKALLFLGSGSIIHSMeplvgyspdKSQNMILMGGLRKYVPITR 395
Cdd:PRK08667 309 ILMGIGLYvifgvygldtlallALGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEKMGGLVKLMPYTS 379
|
410 420 430
....*....|....*....|....*....|....*..
gi 1919568534 396 TTFLCGTLSLCGIPPLACFWSkdEILsnswLYSPFFG 432
Cdd:PRK08667 380 ALFLVGAVSIAALPPFNGFAS--ELL----LYESFFQ 410
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
89-443 |
4.15e-31 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 127.96 E-value: 4.15e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 89 IDPLTSIMLILITTVGILVLIYSDDYMSHD--EGYLRFFVYISFFNTsmlGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 166
Cdd:PRK08377 76 IGPFAALFVLIIAIVSFIMSIFSLKAVEVEpiDKYAMLFLLLMLGAT---GMIATGDIFNLFVFMEITAITAYALTAYNK 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 167 TRPiAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIANnwipntGINFLLTTLCAFLLFLGAVAKSAQFPL 246
Cdd:PRK08377 153 TGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAG------TIDPTVAQVGLALLIFGLAVEAELFPL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 247 HVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFISLPLIMSFISLV---GTVTLFLGATLALAQRDIKRSLAYS 322
Cdd:PRK08377 226 NAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLKLViimATLTVFFAELSALRQKNVKRMIAYS 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 323 TMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLGSGSIIHSMeplvgyspdKSQNMILMGGLRKYVPITRTTFL 399
Cdd:PRK08377 305 SIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALT 375
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1919568534 400 CGTLSLCGIPPLACFWSKdeilsnswlyspFFGIIASFTAGLTA 443
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSK------------FRIILAGLSAGYTW 407
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
88-439 |
2.25e-30 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 125.81 E-value: 2.25e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 88 LIDPLTSIMLILITTVGILVLIYSDDYMSHD-------EGYLRFfvYISFFNT---SMLGLVTSSNLIQIYFFWELVGMC 157
Cdd:PRK06458 66 FIDDLNVFFLALIGVVGFLTSLYSIGYMRHEvehgelsPVTLRL--YYGMYQLflfTMLLALTSNNLGLMWVAIEATTLS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 158 SYLLIGFWFTRPiAASACQKAFVTNRVGD----FGLLLGILGFFWLTGSFE----FRDLFKIANNWIPNtginflLTTLC 229
Cdd:PRK06458 144 SALLVGIYRTRA-SLEAAWKYIIICSVGVafalFGTILVYANAATVMGDGEmailWTELLKHASLLDPT------LMKLA 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 230 AFLLFLGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAA-------GIFLVARLLPLFISlPLIMSFislvGTVT 301
Cdd:PRK06458 217 FVFLLIGFGTKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVAlyavlryYILIDAAIGSDFPG-RLLLIF----GLLS 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 302 LFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLGSGSIIHSMeplvgyspdKS 378
Cdd:PRK06458 292 VLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY---------GT 362
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1919568534 379 QNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNS-----WLYSPF--FGIIASFTA 439
Cdd:PRK06458 363 RDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGlargpLLIAILllLLLTLAFAA 430
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-456 |
2.21e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 119.67 E-value: 2.21e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 13 LLPLPVIMSMGFGLFLIptATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWtiNNDFSLEFgyLIDPL 92
Cdd:PRK07691 5 LVILPILIPVITAILLI--FLGKRPIIQRYVALIGSLLTLVAAIILVANVYKHGIQTLELGNW--KAPFGIVF--VADMF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 93 TSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRpIAA 172
Cdd:PRK07691 79 AALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 173 SACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDL-FKIANNWIPNTGinflLTTLCAFLLFLGAVAKSAQFPLHVWLP 251
Cdd:PRK07691 158 RESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADIsVKIAELSAGQTG----LITVVAILFLFVFATKAGLFPLYFWLP 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 252 DAMEGP-TPISALIhAATMVAAGIFLVARLLPLFIS--LPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLG 328
Cdd:PRK07691 234 GSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 329 YMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSIIHsmepLVGYSPDKSqnmilMGGLRKYVPITRTTFLCGTLSL 405
Cdd:PRK07691 313 VILVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIGIMIK----ITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSL 383
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1919568534 406 CGIPPLACFWSKDEILSNSWLYSPF-FGIIASFTAGLTAFYMFRIYLLTFDG 456
Cdd:PRK07691 384 AGIPPLSGFYGKFFIVEGTFEAGFYvSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
72-473 |
1.63e-27 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 116.59 E-value: 1.63e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 72 LWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDE-GYLRFFVYISFFNTSMLGLVTSSNLIQIYFF 150
Cdd:TIGR01770 51 LTLQYAAYLFTGFSFFIVDNFALLIKLILLLSTLLTFFFALSYLSKEKiNKFEFYILLLFALLGIFLLVSSNDLLSIYLG 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 151 WELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIANNwIPNTGINFLLttlcA 230
Cdd:TIGR01770 131 LELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSN-GMLNISLLLL----G 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 231 FLLFLGAVA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAA-GIFLVARLLPLFISLPLIMSFISLVGTVTLFLGAT 307
Cdd:TIGR01770 206 IVLILVGLLfKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNF 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 308 LALAQRDIKRSLAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFlgsgSIIHSMEplvGYSPDKSQNMILM 384
Cdd:TIGR01770 286 GALAQKKVKRLLAYSSISHVGYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLR---SYKDEWIEYISDF 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 385 GGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEI---LSNSWLYspFFGIIASFTAGLTAFYMFRIYLLTFDGHLRVH 461
Cdd:TIGR01770 359 AGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVffaLLKSGLY--WLAVIAVLTSVIGAFYYLRVVKVMYFDKPERR 436
|
410
....*....|..
gi 1919568534 462 FKNYSSTKEGSL 473
Cdd:TIGR01770 437 IPSNPQSKAQSL 448
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
89-387 |
1.69e-27 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 117.06 E-value: 1.69e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 89 IDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISF--FNTSMLGLvtSSNLIQIYFFWELVGMCSYLLIG--- 163
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGlnk 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 164 FWftRPIAASACQKAFVTNrVGDFGLLLGILGFFWLTGSFEFRDLFKIAN----NWIPNTGINFLLTtlcafllfLGAVA 239
Cdd:PRK08601 148 GW--KVAREAAKISGMLFL-ISWLALALAIVWLFIATGEWQLTSVLSNENlaqlGTWEKTGINLLLI--------LAVMI 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLF-----ISLPLIMSFISLVgtvtlfLGATLALAQRD 314
Cdd:PRK08601 217 PAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFhddiaQILLLIFASISVL------IGTGISLVQVD 289
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1919568534 315 IKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSMEPLVGYSPDKSQNMILMGGL 387
Cdd:PRK08601 290 YKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFNIVKQANEKKSYLWIVVGRV 362
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
80-422 |
1.85e-26 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 114.61 E-value: 1.85e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 80 DFSLEFgYLIDPLTSIMLILITTVGILVLIYSddYMSHDEG-YLRFFVYISffntSMLGLVTSSNLIQIYFFWELVGMCS 158
Cdd:PRK12668 57 GFDLVL-GRVDKLSRVFGLIFGIMAFIGVIYA--LHVKDPGqHVAALLYVG----SALGAVFAGDLLTLFVFWELMAFTS 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 159 YLLIgfWFTR-PIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFkiannwipntginfLLTTLCAFLLFLGA 237
Cdd:PRK12668 130 TFLV--WARGtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIA--------------GLGGTAAWLILIGF 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 238 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLImsfislvGTVTLFLGATLALAQRDIKR 317
Cdd:PRK12668 194 GVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELLIYI-------GAAMAVYGVFFALLENDLRR 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 318 SLAYSTMSQLGYMMLALGIGSYQA---ALFHLITHAYSKALLFLGSGSIIHSmeplVGYSpdksqNMILMGGLRKYVPIT 394
Cdd:PRK12668 267 LLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYR----TGTE-----KLTELGGLYRSMPLT 337
|
330 340
....*....|....*....|....*...
gi 1919568534 395 RTTFLCGTLSLCGIPPLACFWSKDEILS 422
Cdd:PRK12668 338 ALFCLVGALSISAFPLFSGFVSKSMIIS 365
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
44-454 |
1.12e-23 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 105.73 E-value: 1.12e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 44 SVLLLSIAMVFSVHLSIqqiNGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLR 123
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLF---LVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 124 FFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTrPIAASACQKAFVTNRVGDFGLLLgILGFFWLTGSF 203
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGGSG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 204 EFrdlfkiannwipntginfllttLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPL 283
Cdd:MTH00063 156 SF----------------------LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDY 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 284 FISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSI 363
Cdd:MTH00063 213 LLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 364 IhsmeplVGYSPDKSQNMILMGGLRKYVPITRTTFLcgTLSLCGIPPLACFWSKDEILSN--SWLYSPFFGIIASFTAGL 441
Cdd:MTH00063 293 M------SGSGGSQSSNCVYSSILYGSWNLFYLFLL--VLGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVILCVFL 364
|
410
....*....|...
gi 1919568534 442 TAFYMFRIYLLTF 454
Cdd:MTH00063 365 SYLYSFRLCLILF 377
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
16-449 |
4.62e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 103.27 E-value: 4.62e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 16 LPVIMSMGFGLfliptaTKNLRRIWAFpSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTINNDFSLEfgylIDPLTSI 95
Cdd:PRK12662 12 IPLLSAVVCAL------LKNRKLVKII-SCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR----VDILSAT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 96 MLILITTVGILVLIYSDdYMSHDE----GYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIA 171
Cdd:PRK12662 81 MLVLVNFIAVMSVLYGI-YPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKKAL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 172 ASACQkAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIANNWIPNTGINfllttLCAFLLFLGAVAKSAQFPLHVWLP 251
Cdd:PRK12662 160 VAAFE-YLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQ-----IGVLFIMVGLFIKAALFPFHKWLI 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 252 DAM-EGPTPISALIhAATMVAAGIFLVARLLP-------LFISLPLIMSFISLVGTVTLFlGATLALAQRDIKRSLAYST 323
Cdd:PRK12662 234 QAYsEAPSFISVFF-SGTSTKVMIYLIIRIVYdvfkanfVFTTLPFNNVFMILAALAIVF-GSVLAILSKDIKRIFAYSS 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 324 MSQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFLGSGSIIHsmeplvGYSPDKSQNMIlmgGLRKYVPITRTTFLC 400
Cdd:PRK12662 312 ISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISY------HFGTTKLEDCL---NLWKSMPKITLAFVL 382
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1919568534 401 GTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIA-SFTAGLTAFYMFRI 449
Cdd:PRK12662 383 LSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVlLVGSGLSVIYVWKI 432
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
13-454 |
2.21e-22 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 101.18 E-value: 2.21e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 13 LLPLPVIMSMGFGLFLIptATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWtinndfSLEFG--YLID 90
Cdd:PRK12663 5 LLILPMLLPLLCGLVLV--FLRNRDRLQRYLAIGTLTILTLISLALLIYVQRHGPITLDFGGW------LPPFGiqFTGD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 91 PLTSIMLILITTVGILVLIYSddYMSHDEGYLRFFVYiSFFNTSMLGLVTS---SNLIQIYFFWELVGMCSYLLIGFWFT 167
Cdd:PRK12663 77 SLSALMVTTASFVATAIMAYG--FGDIEHSGRRYGFP-PFILLLMAGVIGSfltGDLFNLYVWFEVMLIASFVLITLGQE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 168 RPIAASACQKAFVtNRVGDFGLLLGILGFFWLTGSFEFRDLFKIANNwIPNTGInflLTTLcAFLLFLGAVAKSAQFPLH 247
Cdd:PRK12663 154 REQLRGAIKYVVL-NLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLND-MGDTAT---LTTI-ALLFLLAFGMKAALFPFM 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 248 vWLPDAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFISLPLIMSF-ISLVGTVTLFLGATLALAQRDIKRSLAYSTM 324
Cdd:PRK12663 228 -WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHPlLATMAAITMVIGALGALAYKDIRRIAGYQVI 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 325 SQLGYMMLALGIGSYQA---ALFHLITHAYSKALLFLGSGSIIHsmepLVGYSPDKSqnmilMGGLRKYVPITRTTFLCG 401
Cdd:PRK12663 306 SSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR----LTGYRSLQY-----LGGLYRKEPLFGALFLIL 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1919568534 402 TLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFY-MFRIYLLTF 454
Cdd:PRK12663 377 IFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYsLFRIFFLAY 430
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
13-451 |
2.77e-21 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 97.86 E-value: 2.77e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 13 LLPLPVIMSMGFGLFLIPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQiNGSSIYQYL-WSWTINNDFSLEfgylIDP 91
Cdd:PRK07363 5 LLWLPILGAIIIGFFPGNLPSARLRQITLVFAVLVLAWSLFLLTQFDLSD-PGMQFQEYLpWNEPLGLSYSLG----VDG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 92 LtSIMLILITTVGILVLIYSDDYMSHDEGYlrFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPiA 171
Cdd:PRK07363 80 L-SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-R 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 172 ASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFrdlfkiANNWIPNTGINFLLTTLCAFLLFLGAVAKSAQFPLHVWLP 251
Cdd:PRK07363 156 GYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSF------DYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 252 DAMEGPTPISALIHAATMVAAGIFLVARL-LPLFI-SLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGY 329
Cdd:PRK07363 230 DAYTEASPAVAILLGGVLAKLGTYGLLRFgLQLFPqTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGY 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 330 MMLALGIG---SYQAALFHLITHAYSKALLFLGSGSIihsmEPLVGYSPDKSQNMiLMGGLRKyVPITRTTFLCGTLSLC 406
Cdd:PRK07363 310 ILVAAAAGtqlSLLGAVAQMISHGLILALLFHLVGIV----ERKVGTRDLDVLNG-LMNPIRG-LPLTSALLVLAGMASA 383
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1919568534 407 GIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYmFRIYL 451
Cdd:PRK07363 384 GIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY-FVILL 427
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
16-454 |
2.42e-19 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 91.74 E-value: 2.42e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 16 LPVIMSMGFGLFLIPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYqylwswtinndfslefgYLIDPLtSI 95
Cdd:PRK08676 5 YLLVALLFLRLGLLSRSHRLLNALALGHGLWHLGLSLWVLLVLPLPGYFMESRY-----------------LFIDHL-GI 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 96 MLILITTVG-ILVLIYSDDYMSH-------DEGYLRFFvYISFfntSMLGLVT-----SSNLIQIYFFWELVGMCSYLLI 162
Cdd:PRK08676 67 FVVLIASVVfILAALYARGYVDHllsngelDPENLKVF-YLGF---NLLLSVItfaffSDNLALFWIFAELTTVFSAMLI 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 163 GFWFTRPIAASACQKAFVTNRVGDFGLLlGILGFFWLT------GSFEFRDLFKIANNWIPNtginflLTTLCAFLLFLG 236
Cdd:PRK08676 143 AILSARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTrqalgtGTLNWTELAAHASLLSPS------VLGASFLFIFIG 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 237 AVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFISLPLIMSFISLV---GTVTLFLGATLALAQ 312
Cdd:PRK08676 216 FLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEQFSNVLiglGIFSIAVAAFSMLSQ 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 313 RDIKRSLAYSTMSQLGYMMLALGIGSYQA---ALFHLITHAYSKALLFLGSGsIIHSMeplvgYSPDKSQNmilMGGLRK 389
Cdd:PRK08676 295 RNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRFDR---IFDVFR 365
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1919568534 390 YVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTF 454
Cdd:PRK08676 366 LQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
13-464 |
6.78e-19 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 90.53 E-value: 6.78e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 13 LLPLPVIMSMGFGLFLIPTATKNLRRIwafpSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPL 92
Cdd:PRK06473 5 LIWIPLLGAILIGFWPSGINGKLARSV----ALVIASVLLLLSLVLAFQFDPGNPNQQFTEFIPWIDSLGLSYHLGVDGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 93 tSIMLILITTVGILVLIYSDDYMSHDEGYlrFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFW--FTRPI 170
Cdd:PRK06473 81 -SLPLLVLNSLLTLIAIYSSDESIQRPRF--YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWggQRRGY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 171 AASacqKAFVTNRVGDFGLLLGILGFFWLTGSFEFrDLFKIANNWIPnTGINFLLttLCAFLLFLGAvaKSAQFPLHVWL 250
Cdd:PRK06473 158 AAT---KFLLYTAISGILILVSFLGLVWLSGASSF-DYEPLRSHTLP-LSTQLLL--LAPILVGFGI--KIPLVPFHTWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 251 PDA-MEGPTPISALIhAATMVAAGIFLVARL-LPLFI-SLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQL 327
Cdd:PRK06473 229 PDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgVGLFPeAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHM 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 328 GYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGsiihsmeplVGYSPDKSQNMILMGGL---RKYVPITRTTFLCG 401
Cdd:PRK06473 308 GYILLAAAAAtplSILAAVFQMISHGLISALLFLLVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILG 378
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1919568534 402 TLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGHLRVHFKN 464
Cdd:PRK06473 379 VMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSN 441
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
87-417 |
7.88e-18 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 87.01 E-value: 7.88e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 87 YLIDPLTSIMLILITTVGILVLIysdDYMSHDEGYlRFFVYISFFNT-SMLGLVTSSNLIQIYFFWELVGMCSYLLIGFW 165
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSS-GLYVFLMLMGLaSVSAIVLADDIFNLYVFFEIAAIVQVGLVIAS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 166 FTRPIAASACQKAFVTNRVGDFgLLLGILGFFWLTGSFEFRDlfkIANNWIPNTGINFLLTTLcaFLLFLGAVAKSAQFP 245
Cdd:PRK06277 144 GTEEAYKAALKYMILGNVAGSI-LLLGIGFLLASTGTLNITD---IHNALLVNPTSPVIYGGL--LLLIFGLLYGSGLPP 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 246 LHVWLPDAMEGPTP-ISALIHA---ATMVAAG--IFLVARLLPLFISLPLIMSFISLVGTVtlfLGATLALAQRDIKRSL 319
Cdd:PRK06277 218 FHTIKSDIYAKAKPfGSALLQTfskFVLVALMlvIFKLFGGLSYFPSAQGVLIALSVLAMV---FGVVMALLQTDYKRLL 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 320 AYSTMSQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSIihsmeplvgYSPDKSQNMILMGGLRKYVPITRT 396
Cdd:PRK06277 295 AYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAF 365
|
330 340
....*....|....*....|.
gi 1919568534 397 TFLCGTLSLCGIPPLACFWSK 417
Cdd:PRK06277 366 MVLCAKLAISGVPPFNGFQSK 386
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
89-459 |
3.06e-17 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 85.65 E-value: 3.06e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 89 IDPLTSIMLILITTVGILVLIYSDDYMSHDE----GYLrffvyISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIG- 163
Cdd:PRK08042 58 ISPLNAIWLITLGLCGLFVSLFNIDWHRHAQvkanGLL-----INLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTGn 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 164 -----FWFTrpiaasacqkafvtnrVGDFGLLLGILGFfWLT----GSFEFRDLFKIANNWIPNTGInfLLTTLCAFLLF 234
Cdd:PRK08042 133 skegkLWFA----------------LGRLGTLLLAIAC-WLLwqryGTLDLRLLDMRMQQLPLGSDI--WLLGVIGFGLL 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 235 LGAVaksaqfPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMSFISLV-GTVTLFLGATLALAQR 313
Cdd:PRK08042 194 AGII------PLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVlGMITAFVGGLYALMEH 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 314 DIKRSLAYSTMSQLGYMMLALGIG--------------SYQAALFHLITHAYSKALLFLGSGSIIHSmeplVGYspdksQ 379
Cdd:PRK08042 268 NIQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----R 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 380 NMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEI------LSNSWLY-----SPFFGIIASFTAGLTAFYMFR 448
Cdd:PRK08042 339 DIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFvarllGPLLAVGLAITGALAVMCMAK 418
|
410
....*....|.
gi 1919568534 449 IYLLTFDGHLR 459
Cdd:PRK08042 419 VYGVTFLGAPR 429
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
134-449 |
4.30e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 83.54 E-value: 4.30e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 134 SMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIAN 213
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 214 NWIPNTGINFLLTTLcafLLFLGAVAKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarllpLFISLPLIMS 292
Cdd:MTH00196 85 SGQSFSSVSVPIGYL---LIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLNVN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 293 FISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSY---QAALFHLITHAYSKALLFlgsgSIIhsmep 369
Cdd:MTH00196 154 ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVF----SII----- 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 370 lVGYSPDKSQnMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFF-GIIASFTAGLTAFYMFR 448
Cdd:MTH00196 225 -LALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLiFLLAVFCSVIAGVYYVR 302
|
.
gi 1919568534 449 I 449
Cdd:MTH00196 303 I 303
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
226-454 |
1.91e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 83.09 E-value: 1.91e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 226 TTLCAFLLFLGAVaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFISLPLIMSFISLVGTVTLFL 304
Cdd:PRK12665 209 TALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVV 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 305 GATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFLGSGSIihsmEPLVGyspdkSQNM 381
Cdd:PRK12665 287 GILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSL 357
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1919568534 382 ILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEIL-----SNSWLysPFFGIIAS-FTAGLTAFYMFRIYLLTF 454
Cdd:PRK12665 358 RRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagaeDGTWL--AWALVAGGvVTSLLTLYAVARVWTKAF 434
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
136-453 |
3.95e-16 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 82.00 E-value: 3.95e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 136 LGLVTSSNLIQIYFFWELVGMCSYLLIGFW--FTRPIAASacqKAFVTNRVGDFGLLLGILGFFWLTGSFEFrDLFKIAN 213
Cdd:PRK12561 101 IGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAAT---KFILYTALASIFILVAGLALALSGDTFTF-DLAELGA 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 214 NwipNTGINFLLTTLCAFLLFLGAvaKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFL------VARL-LPLFI 285
Cdd:PRK12561 177 K---SYPLALELLLYAGFLIAFGV--KLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaLIRFnVQMLP 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 286 SLPLIMSFISLV-GTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMlaLGIGSYQA-----ALFHLITHAYSKALLFLG 359
Cdd:PRK12561 245 DAHVYFAPALAIlGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQMISHGLIAAALFFL 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 360 SGsiihsmeplVGYSPDKSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEI---LSNSWLYSPFFGIIAS 436
Cdd:PRK12561 323 TG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgITSSDVYSSTFRTITI 393
|
330 340
....*....|....*....|.
gi 1919568534 437 FTAG----LTAfymfrIYLLT 453
Cdd:PRK12561 394 LLAAvgliLTP-----IYLLS 409
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
67-454 |
1.16e-15 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 80.43 E-value: 1.16e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 67 SIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFvyISFFNTSMLG---LVTSSN 143
Cdd:CHL00049 55 SITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEF--LLFVLTATLGgmfLCGAND 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 144 LIQIYFFWELVGMCSYLLIGFwftrpiaasaCQKAFVTNRVGDFGLLLG-----IL--GFFWLTG-SFEFRDLFKIANNW 215
Cdd:CHL00049 133 LITIFVALECLSLCSYLLSGY----------TKKDVRSNEATMKYLLMGgasssILvyGFSWLYGlSGGEIELQEIVNGL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 216 IPNTGINFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPL--FISLPLIMS 292
Cdd:CHL00049 203 INTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRIFDIpfYFSSNEWHL 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 293 FISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSMEPLVG 372
Cdd:CHL00049 282 LLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTG 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 373 yspdkSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSW---LYSPFFgiIASFTAGLTAFYMFRI 449
Cdd:CHL00049 362 -----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWqagLYFLVS--IGLLTSVISIYYYLKI 434
|
....*
gi 1919568534 450 YLLTF 454
Cdd:CHL00049 435 IKLLM 439
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
44-503 |
1.23e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 80.06 E-value: 1.23e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 44 SVLLLSIAMVFSVHLsIQQINGSSIYQYLWSWTINNDFSLEFGYLIdplTSIMLILITTVGILVLIYSDDYMShdEGYLR 123
Cdd:MTH00199 25 STLKLSIGVLLLIGL-IVELNSLNLFQSDKVLDGTNGLLLTNSWII---ISKIIIIIGSISILLMGSGETILS--EGGQS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 124 FFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSF 203
Cdd:MTH00199 99 SPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGET 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 204 EFRdlfkiANNWIPNTGINFLLTTLCafLLFLGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLVARLLP 282
Cdd:MTH00199 179 SIQ-----GINSILTGDVGKILITIS--LLFKLSAA-----PFHMWAPDVYEGaPTITTALL--ATVPKIGVFSILVQIG 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 283 LFISLPLIMSFISLVgtvtlfLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSY---QAALFHLITHayskALLFLG 359
Cdd:MTH00199 245 PVTNVVLICAVLSII------YGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFesiQASLIYMIIY----VIMSIC 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 360 SGSIIHSMEPLVGYspdksqnMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEIL----SNSWLYSPFFGIIA 435
Cdd:MTH00199 315 SFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILlsgvSSGYYLICIIAVLS 387
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1919568534 436 SFTAGLtaFYMFRIYLLTFDGHlrvhfknysstkegslYSISLWGKSIpkgvNRDFVLSTTKS---GVSFF 503
Cdd:MTH00199 388 SVIAGV--YYVRVVQIIYFQAD----------------YSILIWQKVL----KKEERLDLSKSiliGVTFF 436
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
75-125 |
1.02e-14 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 68.61 E-value: 1.02e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1919568534 75 WTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFF 125
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
148-453 |
5.18e-13 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 72.05 E-value: 5.18e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 148 YFFWELVGMCSYLLIGFW--FTRPIAASacqKAFVTNRVGDFGLLLGIL--GFFWLTGSFEFRDLfkiANNwipNTGINF 223
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWggKKRQYAAT---KFILYTAGSSLFILLAALamAFYGDTPTFDMTAL---AAK---DFGLGF 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 224 LLTTLCAFLLFLGAvaKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV----------ARLLP----LFISLPL 289
Cdd:PRK02546 212 QLLCYAGLLIAYGV--KLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKmggyallrmnAGMLPdahaQFAPLLI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 290 IMsfislvGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMlaLGIGSYQA-----ALFHLITHAYSKALLFLgsgsii 364
Cdd:PRK02546 284 VL------GVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLFF------ 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 365 hsmepLVGYSPDKSQNMIL--MGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEI---LSNSWLYSPFFGIIASFTA 439
Cdd:PRK02546 350 -----LVGATYDRTHTLMLdeMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVfvgFATSDAYTLPFRVVVVFLA 424
|
330
....*....|....
gi 1919568534 440 GLTAFyMFRIYLLT 453
Cdd:PRK02546 425 AVGVI-LTPIYLLS 437
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
65-417 |
6.95e-13 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 71.62 E-value: 6.95e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 65 GSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFfnTSMLG---LVTS 141
Cdd:PRK02504 52 GAALVALALQWDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYVEQSGTPLGEFAAILL--TATLGgmfLSGA 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 142 SNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEfrDLFKIANNWIPNTGi 221
Cdd:PRK02504 130 TELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGST--QLSAIALALITSPS- 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 222 nflLTTLCAFLLFLGAVA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLLPLfiSLPLIMSFISLVGT 299
Cdd:PRK02504 207 ---LGLALALVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLVT--AFPSFDEQWKLLFT 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 300 V----TLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS---YQAALFHLITH------AYSKALLF-LGSGSiih 365
Cdd:PRK02504 281 AlailSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAYlfmnlgAFACVILFsLRTGT--- 357
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1919568534 366 smEPLVGYSpdksqnmilmgGLRKYVP-ITRTTFLCgTLSLCGIPPLACFWSK 417
Cdd:PRK02504 358 --DQISDYA-----------GLYQKDPlLTLGLSLC-LLSLGGIPPLAGFFGK 396
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
136-506 |
1.87e-10 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 63.81 E-value: 1.87e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 136 LGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTnRVGDFGLLLGILGF-FWLTG--SFEFRDLfkiA 212
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT-AGGSIFLLIGVLGMgLYGSNepTLNFETL---A 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 213 NNWIP-NTGINFLLTTLCAFllflgAVaKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVA----------RL 280
Cdd:CHL00011 202 NQSYPvALEILFYIGFLIAY-----AV-KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMgayglirinmEL 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 281 LPLFISLplIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMlaLGIGSY-----QAALFHLITHAYSKAL 355
Cdd:CHL00011 269 LPHAHSI--FSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIGAA 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 356 LFlgsgsiihsmePLVGYSPDKSQNMIL--MGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEI---LSNSWLYSPF 430
Cdd:CHL00011 345 LF-----------FLAGTSYDRIRLVYLdeMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVffgIITSQKYLLM 413
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 431 FGIIASFTAG----LTAFYMFRIYLLTFDGHLRVHFKNYSSTKEGS---LYSISLWGKSIPKGVNRDFVLSTTKSGVSFF 503
Cdd:CHL00011 414 PKILITFVMAigmiLTPIYLLSMLRQMFYGYKLFNVPNSYFFDSGPrelFISICILLPVIGIGIYPDFVLSLSVDKVEAI 493
|
...
gi 1919568534 504 SQN 506
Cdd:CHL00011 494 LSN 496
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
46-456 |
7.42e-10 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 61.68 E-value: 7.42e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 46 LLLSIAMVFSVHLSIQQINGSSIYQYLWSWTINNDFSLEFGYL-IDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRF 124
Cdd:MTH00014 13 LLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLsSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 125 FVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFwltgsFE 204
Cdd:MTH00014 93 MTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIF-----YT 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 205 FRDLFKIANNWIPNTginFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------V 277
Cdd:MTH00014 168 NNSLSMLMSSMEPPS---IYLMNLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 278 ARLLPLFISLPLIMS-FISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYM---MLALGIGSYQAALFHLITHAYSK 353
Cdd:MTH00014 238 LRMSSLFMHINKSLSaPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMtagIMSNTSWGWQGALAMMIAHGLCS 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 354 ALLFLGSGSIihsmeplvgYSPDKSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGI 433
Cdd:MTH00014 318 SALFALANMT---------YETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAI 388
|
410 420
....*....|....*....|...
gi 1919568534 434 IASFTAGLTAFYMFRIYLLTFDG 456
Cdd:MTH00014 389 LLAITSFLAAAYSLFLYTSTQHG 411
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
190-449 |
1.98e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 61.03 E-value: 1.98e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 190 LLGILGFFWLTGSFEFrdLFKIANNWIPNTGINFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAAT 268
Cdd:MTH00198 264 LFGCALYFGFTGNEGM--LGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGaPTPTTALIAIIP 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 269 MVAAGIFLVArllpLFISLPLIMSfislVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQaALFHLIT 348
Cdd:MTH00198 342 KFTVYILLTS----LVITSKLLLS----VAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYE-SLQASWT 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 349 HAYSKALLFLGSGSIIHSMEPLVGYSPDKSQNMILMGG---LRKYV---------PITRTTFLCGTLSLCGIPPLACFWS 416
Cdd:MTH00198 413 YAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNynlVRRLVdltilsrgqPYIAFSLAIVFLSLAGIPPLLGFLG 492
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1919568534 417 KDEILSNS-----------WLYSPFFGIIASFtagLTAFYMFRI 449
Cdd:MTH00198 493 KWFILVGSikiafssslsiYYLVALFAIICTC---ISAFYYIRI 533
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
94-363 |
3.09e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 60.19 E-value: 3.09e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 94 SIMLILITTVGILVLIYSDDYmSHDEGYLRffvyiSFFNTSMLGLV---TSSNLIQIYFFWELVGMCSYLLIGfwftrpI 170
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWLS-----SLYILTILGMAivlTSDNYLLFLAGWEIMTIPSYVAIA------L 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 171 AASACQKAFVTNRVGDFGLLLGILGFFW---LTGSFEFrdlfkiannwipntgiNFLLTTLCAFLLFLGAVAKSAQFPLH 247
Cdd:PRK06459 115 TKKNKRPAFVFMAFGELSTVLILAGFAWafiISGTTNF----------------SYLPSPVPLILASFGFIIKMGMMPFL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 248 V--WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPL--IMSFISLVGTVTLFLGATLALAQRDIKRSLAYST 323
Cdd:PRK06459 179 VseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIgyFGLTILAIGAFSILFGALYAYVSENVKGLLAFST 258
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1919568534 324 MSQLGYMMLALG--IGSYQ-----------AALFHLITHAYSKALLFLGSGSI 363
Cdd:PRK06459 259 IENNGAILVALGlyMVTKQlitsiehfsliTVILYSFAHSVAKTGLFLSSGLQ 311
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
143-447 |
4.37e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 59.55 E-value: 4.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 143 NLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLfkIANNWIPNTGIN 222
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTL--ASCSHVVSEQTQ 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 223 FLLttlcaFL-LFLGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLfisLPL----IMSFISL 296
Cdd:MTH00226 230 KWI-----FLgIFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPI---LPLgaqnLAPAVIA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 297 VGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLAL---GIGSYQAALFHLITHAYSKALLFLgsgsiihsmepLVGY 373
Cdd:MTH00226 302 MGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFI-----------LVTI 370
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1919568534 374 SPDKSQNMIL--MGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMF 447
Cdd:MTH00226 371 LYDRHHTRLIkyYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
26-466 |
4.77e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 59.18 E-value: 4.77e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 26 LFLIPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSwtinndfslefgylIDPLTSIMLILITTVGI 105
Cdd:MTH00206 8 MLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLS--------------YDPLSSPLVILSCWLLP 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 106 LVLIYSDDYMsHDEGYLRFFVYISFFNTSMLGLV---TSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTN 182
Cdd:MTH00206 74 LMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYT 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 183 RVGDFGLLLGILGFFWLTGSFEFrdlfkianNWIPNTGINFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDA-MEGPTpis 261
Cdd:MTH00206 153 LIGSLPLLIALLFLQNSLGSLSL--------YILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAhVEAPV--- 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 262 alihAATMVAAGIFL------VARLLPLFI-SLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLAL 334
Cdd:MTH00206 222 ----AGSMVLAGVLLklggygMMRIILILGpSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGI 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 335 GIGS---YQAALFHLITHAY-SKALLFLGSgsiihsmeplVGYSPDKSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPP 410
Cdd:MTH00206 298 LSGSpwgFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPP 367
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1919568534 411 LACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGHLRVHFKNYS 466
Cdd:MTH00206 368 FPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
230-422 |
9.59e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 58.32 E-value: 9.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 230 AFLLFLGAVAKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLF------ISLPLIMSFISLVGTVTL 302
Cdd:PRK12666 213 AALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeagASAGFGQDWLLPGGLATL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 303 FLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFL-----------GSGSIIHSME 368
Cdd:PRK12666 291 AFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgaAADRLAVTPE 370
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1919568534 369 PlvgYSPDKSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILS 422
Cdd:PRK12666 371 L---YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQ 421
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
89-464 |
5.25e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 56.12 E-value: 5.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 89 IDPLTSIMLILITTVGILVLIYSDDYMSHdEGYLRFFVYISFFNTSMLGLV---TSSNLIQIYFFWELVGMCSYLLIGFW 165
Cdd:MTH00127 59 TDPLSTPLLVLTCWLLPLMILASQNHTAP-EPINRQRMYITLLTSLQIFLIlafGATEIIMFYVMFEATLIPTLIIITRW 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 166 FTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLfKIANNWIPNTGINFLLTTLC--AFLLflgavaKSAQ 243
Cdd:MTH00127 138 GNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTL-QYSQPLQLSSWADKLWWAGCllAFLV------KMPL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMS--FISLvGTVTLFLGATLALAQRDIKRSLAY 321
Cdd:MTH00127 211 YGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSypFIIL-ALWGIIMTGSICLRQTDLKSLIAY 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 322 STMSQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSiihsmeplvGYSPDKSQNMILMGGLRKYVPITRTTF 398
Cdd:MTH00127 290 SSVSHMGLVAGGILIQtpwGFTGALILMIAHGLTSSALFCLANT---------NYERTHSRTMLLARGLQMILPLMATWW 360
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1919568534 399 LCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGHLRVHFKN 464
Cdd:MTH00127 361 FIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIA 426
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
88-478 |
6.56e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 55.69 E-value: 6.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 88 LIDPLTSIMLILITTVGILVLIYSDDYMShDEGYLRFFVYIS---FFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGF 164
Cdd:MTH00068 57 GIDQISSPLLILTCWLLPLMILASQNHLK-NEPINRQRTYISmliILQLTLILAFSATELILFYIFFEATLIPTLIIITR 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 165 WF--TRPIAASAcQKAFVTnRVGDFGLLLGILGFFWLTGSFEFrDLFKIANNWIPNTGINFLLTTLC--AFLLflgavaK 240
Cdd:MTH00068 136 WGnqEERLNAGT-YFLFYT-LAGSLPLLIALLILQNSLGSLSL-ILLELMSPMQLMTYTNKIWWLACllAFMV------K 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 241 SAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLF--ISLPLIMSFI--SLVGTVtlfLGATLA 309
Cdd:MTH00068 207 MPLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygILRISILLtpLSKELSYPFIilALWGVL---MTSLIC 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 310 LAQRDIKRSLAYSTMSQLGYMMLALGIG---SYQAALFHLITHAY-SKALLFLGSGSiihsmeplvgYSPDKSQNMILMG 385
Cdd:MTH00068 277 LRQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCLANTN----------YERTHSRTLLLLR 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 386 GLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGHLRVHFKNY 465
Cdd:MTH00068 347 GAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNHLKTL 426
|
410
....*....|....*
gi 1919568534 466 --SSTKEGSLYSISL 478
Cdd:MTH00068 427 fpTYTREHLLLALHI 441
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
139-486 |
2.50e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 53.43 E-value: 2.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 139 VTSSNLIQIYFFWELVGMCSYLLIGFWFTrPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFefrdlfkiannwipn 218
Cdd:MTH00200 21 FSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW--------------- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 219 tGINFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfislpLIMSFISLVG 298
Cdd:MTH00200 85 -GISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPA-----LNSNILLLLG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 299 TVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLgsgsiihsmeplvgYSPDKS 378
Cdd:MTH00200 159 LLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL--------------LNLLNS 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 379 QNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFriylltfdghL 458
Cdd:MTH00200 225 TKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFY----------L 294
|
330 340
....*....|....*....|....*...
gi 1919568534 459 RVHFKNYSSTKEGSLYSISLWGKSIPKG 486
Cdd:MTH00200 295 RLSYLTLLTLSPNQINMMSSWRTKSNSN 322
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
74-450 |
5.67e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 52.76 E-value: 5.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 74 SWTINNDFSLEFGYLIDPLTSIML------ILITTVGILVLIYSDDYMshdegYLRFFVYISFFNTSMLGLVTSSNLIQI 147
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVSLffilltTLLIPICILISWKSIKFL-----FKEFLLCLLFLEVLLIGVFSVLDLLLF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 148 YFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIAnnwIPNTGINFLLTT 227
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIK---LPLSIQKWLLVG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 228 LcafllFLGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFISLPLIMS-FISLVGTVTLFLG 305
Cdd:MTH00204 215 F-----FLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFApLIVMLSVIAVIYG 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 306 ATLALAQRDIKRSLAYSTMSQLGYMMLAL---GIGSYQAALFHLITHAYSKALLFLGSGSIihsmeplvgYSPDKSQNMI 382
Cdd:MTH00204 290 SLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFL---------YERHHTRLIK 360
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1919568534 383 LMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIY 450
Cdd:MTH00204 361 YYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
222-478 |
6.82e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 51.81 E-value: 6.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 222 NFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarlLPLFISLPLIMSFISLVGTVT 301
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFL----LSNFLDLYWLAYLLCVISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 302 LFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSMEPLVGYSPDKSQNM 381
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 382 ILMGGLrkyvpitrttflcgtLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTA--FYMFRIYLLTFDGhlr 459
Cdd:MTH00144 235 SIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSFLSS--- 296
|
250
....*....|....*....
gi 1919568534 460 vhFKNYSSTKEGSLYSISL 478
Cdd:MTH00144 297 --SKSKKSNSSKVLNSSII 313
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
135-466 |
1.95e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 51.21 E-value: 1.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 135 MLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFkiann 214
Cdd:MTH00217 122 LMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC----- 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 215 wipNTGINFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAmegptpisaliHAATMVAAGIFLVARLLPL----FI--SLP 288
Cdd:MTH00217 197 ---CLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQA-----------HVEAPVAGSVILAGVLLKLggygFIrfSWP 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 289 LIMS----FISLVGTVTLF---LGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFL 358
Cdd:MTH00217 263 LLPEaseyFSPLIQTLSLLaiiYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQglvAAIFLMLAHGLVSSALFI 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 359 GSGSIIHSMEP-LVGYSPDKSQNMILMGGLrkyvpitrttFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASF 437
Cdd:MTH00217 343 AVTFLYERHHTrLIKYYRGMVITMPLFGIL----------MLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASL 412
|
330 340
....*....|....*....|....*....
gi 1919568534 438 TAGLTAFYmfRIYLLTfdghlRVHFKNYS 466
Cdd:MTH00217 413 GMVLSAGY--SIYLYN-----RVCFGAPS 434
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-332 |
2.22e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 50.55 E-value: 2.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 87 YLIDPLTSIMLILITTVGILVLIYSDD--------YMSHDEGYLrFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCS 158
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 159 YLLIGFWfTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRD----LFKIANNWIPNTGINFLLTtlcafllf 234
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDiaayLQEHTNSRIITIAIGFFLI-------- 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 235 lGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFISLP----LIMSFISLVGTVTLFLGATLAL 310
Cdd:PRK06591 223 -GAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYEtiktAITNFIRPIALATLIIAPYFAY 301
|
250 260
....*....|....*....|..
gi 1919568534 311 AQRDIKRSLAYSTMSQLGYMML 332
Cdd:PRK06591 302 QAKNFKNIIIYSCFTQIGYVFL 323
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
141-447 |
3.05e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 50.22 E-value: 3.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 141 SSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFrdlfkianNWIPNTG 220
Cdd:MTH00150 74 VSSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM--------LLISSLR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 221 INFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLF-ISLPLIMS 292
Cdd:MTH00150 146 KLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFsLSSSSFSI 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 293 FISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLgsgsiihsmep 369
Cdd:MTH00150 219 FLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFCSSGLFC----------- 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 370 LVGYSPDKSQ--NMILMGGLRKYVPItrTTFLCGTLSLC--GIPPLACFWSKDEILSNSWLYSPFFGII---ASFTAGLT 442
Cdd:MTH00150 288 LANYTYEKVHsrSLFLSKGMLMLYPS--LSLWWFLFCIInmAAPPSLNLLSEIMIFPSLISYSPWFFVPlglMVFLSGLY 365
|
....*
gi 1919568534 443 AFYMF 447
Cdd:MTH00150 366 SLYLY 370
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
82-387 |
4.66e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 46.51 E-value: 4.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 82 SLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLL 161
Cdd:MTH00205 48 FISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLIL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 162 IGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRDLFKIANNwipntgiNFLLTTLCAFLLfLGAVAKS 241
Cdd:MTH00205 128 ILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFS-------DFYLFLYWIFLM-LAFLVKL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 242 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFISL-----PLIMSfISLVGTVtlfLGATLA 309
Cdd:MTH00205 200 PMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRITSMLYKLnsnfsELFFS-ISLWGGV---MTGMIC 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 310 LAQRDIKRSLAYSTMSQLGYMMLALGIGS---YQAALFHLITHAY-SKALLFLGSgsiihsmeplVGYSPDKSQNMILMG 385
Cdd:MTH00205 269 LRQVDLKSLIAYSSVGHMGLMVVGVFSNTswgMNGAIIMMVAHGLcSSGMFALAN----------VNYERTNSRSMLMNK 338
|
..
gi 1919568534 386 GL 387
Cdd:MTH00205 339 GV 340
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
124-480 |
7.86e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 45.69 E-value: 7.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 124 FFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFT-RPIAASAcqKAFVTNRVGDFGLLLGILGFFWLTGS 202
Cdd:MTH00041 6 LIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSpRSVEATI--KYFLVQAFSAAILLNGALIQAWLSGS 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 203 FEfrdlfkiannwipntgINFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVarllp 282
Cdd:MTH00041 84 WS----------------INGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILL----- 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 283 LFISLPLIMSFISLVGTVTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGS 362
Cdd:MTH00041 143 ISISNLLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNF 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 363 IIHSMEPLvgyspdksqnmilmGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSK-----DEILSNSWLYSPFFgIIASF 437
Cdd:MTH00041 223 SLSTLSHL--------------NKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIIL-IIGSL 287
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1919568534 438 tagLTAFYMFRI----YLLTFDGHLRVHFKNYSSTKEGS-------LYSISLWG 480
Cdd:MTH00041 288 ---LSLFFYLRIsfntSLTLFPQHSISLFSWRNSGNITVygvilsiLSSISILG 338
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
224-414 |
8.70e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 45.20 E-value: 8.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 224 LLTTlcAFLLFLGAVaksaqfPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarllpLFISLPLI-MSFISLVGTVTL 302
Cdd:MTH00112 97 LLTL--ALAMKLGLA------PFHFWLPEVLQGSTTTTALILSTWQKLAPLTL------LLMTSNSLnPTLLLTLAILST 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 303 FLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIgSYQAALFHLITHAYSKALLFLgsgsIIHSMeplvgyspdKSQNMI 382
Cdd:MTH00112 163 LIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTT---------STKTLK 228
|
170 180 190
....*....|....*....|....*....|..
gi 1919568534 383 LMGGLRKYVPITRTTFLCGTLSLCGIPPLACF 414
Cdd:MTH00112 229 DMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGF 260
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
222-454 |
8.59e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 41.97 E-value: 8.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 222 NFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFISLPLIMSFISLV--GT 299
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLILAFNSSSFMGLLicSV 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 300 VTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSMEPLVGYSPDKSQ 379
Cdd:MTH00197 145 LSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSS 224
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1919568534 380 NMILmgglrkyvpitrttFLCGTLSLCGIPPLACFWSKDEILSN-SWLYSPFFGIIASFTAGLTAFYMFRIYLLTF 454
Cdd:MTH00197 225 NLVF--------------LGLSFLSLGGLPPLSGFFLKWLILTSlLSSNISLITFMLILSTCFSLYYYLSLAYKSL 286
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
222-366 |
4.81e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 40.10 E-value: 4.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 222 NFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAA--TMVAAGIFLvarllpLFISLPLIMSFislVGT 299
Cdd:PRK12664 139 NGQYTGYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLftTKVAALVLL------LFFSGEEILLF---LGI 209
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1919568534 300 VTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS-----YQAALFHLITHAYSKALLFLGSGSIIHS 366
Cdd:PRK12664 210 ITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINR 281
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
222-454 |
4.99e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 39.89 E-value: 4.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 222 NFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL---VARLLPLFISLPLIMS----F 293
Cdd:MTH00094 146 DFFLSWEMFFILSLSFMMKFPVYFLHLWLPKAhVEAPT-------TASMLLAGLLLklgTAGFLRILGSLNFVYNnfwiI 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 294 ISLVGTVtlfLGATLALAQRDIKRSLAYST---MSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSMepl 370
Cdd:MTH00094 219 FSLLGMI---LSSFCCVFQSDSKSLAAYSSvthMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHIS--- 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 371 vgyspdKSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSpFFGIIASFTAGLTAFYmFRIY 450
Cdd:MTH00094 293 ------KSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKN-KFSFFFIFFYFLVSFY-YSLF 364
|
....
gi 1919568534 451 LLTF 454
Cdd:MTH00094 365 LIVS 368
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
78-473 |
5.39e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 39.88 E-value: 5.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 78 NNDFSLEFgyLIDPLTSIMLILITTVGILVLIYSDDYMSHdEGYLRFFVYISFFNTSMLGLV---TSSNLIQIYFFWELV 154
Cdd:MTH00110 49 SLNFSLLF--FSDSLSTPLLILTTWLLPLMLMASQHHLSK-EPLTRKKLYITMLILLQLFLImtfTATELIMFYILFEAT 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 155 GMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWLTGSFEFRdLFKIANNWIPNTGINFLLTTLC--AFL 232
Cdd:MTH00110 126 LIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFL-LLQLWAQPLPNSWSNNLLWLACmmAFM 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 233 LflgavaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPL------FISLPLIMsfISLVGT 299
Cdd:MTH00110 205 V------KMPLYGLHLWLPKAhVEAPI-------AGSMVLAAILLklggygMMRITIIlnplteFMAYPFLM--LSLWGM 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 300 VtlfLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSiihsmeplvGYSPD 376
Cdd:MTH00110 270 I---MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMIAHGLTSSMLFCLANS---------NYERI 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 377 KSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDG 456
Cdd:MTH00110 338 HSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSLYMLITTQRG 417
|
410
....*....|....*....
gi 1919568534 457 HLRVHFKNY--SSTKEGSL 473
Cdd:MTH00110 418 KLTHHINNIkpSFTRENTL 436
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
221-421 |
5.71e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 39.52 E-value: 5.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 221 INFLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHA-----ATMvaAGIFLVARLLPLfiSLPLIMSFIS 295
Cdd:MTH00070 86 IMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILStwqklAPM--ALLIQISHLLNS--NLLIIMGLLS 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1919568534 296 lvgtvtLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIgSYQAALFHLITHAYSKALLFLgsgSIIHSMeplvgysp 375
Cdd:MTH00070 162 ------TLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL---MLMNLN-------- 223
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1919568534 376 dkSQNMILMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00070 224 --STNINKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLIL 267
|
|
| |
