NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1916859217|gb|QOL00971|]
View 

NADH dehydrogenase subunit 1 (mitochondrion) [Filchnerella sunanensis]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 4.54e-148

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 418.02  E-value: 4.54e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   5 LIMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVFS 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  85 LMISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 165 SFNMVDFMNYQLYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859217 245 TLIFMGGDFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFAGLKVLL 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 4.54e-148

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 418.02  E-value: 4.54e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   5 LIMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVFS 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  85 LMISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 165 SFNMVDFMNYQLYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859217 245 TLIFMGGDFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFAGLKVLL 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
13-304 1.16e-98

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 292.45  E-value: 1.16e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  13 LLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVFSLMISLLVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  93 MIFPYLTYM--CSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMVD 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 171 FMNYQLYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIFMG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 251 G------DFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFA 304
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-310 6.65e-93

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 278.94  E-value: 6.65e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   4 DLIMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  84 SLMISLLVWMIFPYLTYMC--SFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 162 LIGSFNMVDFMNYQ-LYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 241 SMLMTLIFMGG--------DFYS----FFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFAGLKV 308
Cdd:COG1005   247 SALATTLFLGGwlgpfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVL 326


                  ..
gi 1916859217 309 LL 310
Cdd:COG1005   327 LF 328
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 4.54e-148

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 418.02  E-value: 4.54e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   5 LIMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVFS 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  85 LMISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 165 SFNMVDFMNYQLYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859217 245 TLIFMGGDFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFAGLKVLL 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 6-307 1.04e-126

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 363.97  E-value: 1.04e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   6 IMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVFSL 85
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  86 MISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 166 FNMVDFMNYQLYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMT 245
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916859217 246 LIFMGGDFY--SFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFAGLK 307
Cdd:MTH00225  241 ILFFGGFFVtiDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIIL 304
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 6-306 2.48e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 337.61  E-value: 2.48e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   6 IMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVFSL 85
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  86 MISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 166 FNMVDFMNYQLYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMT 245
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859217 246 LIFMGGDF-----YSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFAGL 306
Cdd:MTH00143  241 VLFFGGSSvlfllGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 5-310 6.54e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 308.59  E-value: 6.54e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   5 LIMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVFS 84
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  85 LMISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 165 SFNMVDFMNYQLYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00195  161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859217 245 TLIFMGGDfYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFAGLKVLL 310
Cdd:MTH00195  241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 5-313 6.69e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 308.76  E-value: 6.69e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   5 LIMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVFS 84
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  85 LMISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 165 SFNMVDFMNYQLYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1916859217 245 TLIFMGGDFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFAGLKVLLISM 313
Cdd:MTH00218  241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASL 309
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-312 2.09e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 305.39  E-value: 2.09e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   7 MFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVFSLM 86
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  87 ISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSF 166
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 167 NMVDFMNYQLYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTL 246
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1916859217 247 IFMGG-------DFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFAGLKVLLIS 312
Cdd:MTH00104  241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTAS 313
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-312 1.16e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 301.15  E-value: 1.16e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   5 LIMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVFS 84
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  85 LMISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 165 SFNMVDFMNYQLYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916859217 245 TLIFMGGDFY-------SFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFAGLKVLLIS 312
Cdd:MTH00071  244 TILFLGSTYNhlqpelsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLG 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 5-297 1.15e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 296.04  E-value: 1.15e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   5 LIMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVFS 84
Cdd:MTH00111    4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  85 LMISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00111   84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 165 SFNMVDFMNYQLYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLM 244
Cdd:MTH00111  164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 245 TLIFM-------GGDFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00111  244 TILFLnpstlnlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
NADHdh pfam00146
NADH dehydrogenase;
13-304 1.16e-98

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 292.45  E-value: 1.16e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  13 LLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVFSLMISLLVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  93 MIFPYLTYM--CSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMVD 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 171 FMNYQLYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIFMG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 251 G------DFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFA 304
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 3-310 8.85e-97

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 288.41  E-value: 8.85e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   3 YDLIMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPV 82
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  83 FSLMISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00040   81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 163 IGSFNMVDFMNYQLYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSM 242
Cdd:MTH00040  161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859217 243 LMTLIFMGGD--FYSFFFF------VKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFAGLKVLL 310
Cdd:MTH00040  241 LSVILFLGGGspFNEIFPIniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-306 3.60e-96

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 286.89  E-value: 3.60e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   1 MLYDLIMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFS 80
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  81 PVFSLMISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 160
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 161 ILIGSFNMVDFMNYQLYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 241 SMLMTLIFMGGDFYSFF-------FFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIF-------FAGL 306
Cdd:MTH00134  241 NTLSAILFLGASHIPTLpelttinLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWhlalpiaFAGL 320
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-310 6.65e-93

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 278.94  E-value: 6.65e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   4 DLIMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  84 SLMISLLVWMIFPYLTYMC--SFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 162 LIGSFNMVDFMNYQ-LYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 241 SMLMTLIFMGG--------DFYS----FFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFAGLKV 308
Cdd:COG1005   247 SALATTLFLGGwlgpfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVL 326


                  ..
gi 1916859217 309 LL 310
Cdd:COG1005   327 LF 328
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 6-311 1.56e-92

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 277.43  E-value: 1.56e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   6 IMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVFSL 85
Cdd:MTH00010    3 ISFFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  86 MISLLVWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00010   83 ILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQT 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 166 FNMVDFMNYQlYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMT 245
Cdd:MTH00010  163 FSFSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTS 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 246 LIFMGGDFYSFF----FFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFAGLKVLLI 311
Cdd:MTH00010  242 VFFTSFIPSIFIsdlmLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 5-306 2.26e-86

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 261.97  E-value: 2.26e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   5 LIMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVFS 84
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  85 LMISLLVWMIFPYLT--YMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00054   81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 163 IGSFNMVDFMNYQLYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSM 242
Cdd:MTH00054  161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916859217 243 LMTLIFMGGDFY----------SFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFAGL 306
Cdd:MTH00054  241 FGVILFLGGWLVisgptsyfsnFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGI 314
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-306 2.94e-86

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 261.98  E-value: 2.94e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   1 MLYDLIMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFS 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  81 PVFSLMISLLVWMIFPYL--TYMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 159 LIILIGSFNMVDFMNYQL-YCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSI 237
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1916859217 238 IFMSMLMTLIFMGG--------DFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFAGL 306
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-297 5.03e-86

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 261.28  E-value: 5.03e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   5 LIMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVFS 84
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  85 LMISLLVWMIFPYLTY--MCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:PRK06076   89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 163 IGSFNMVDFMNYQLYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSM 242
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859217 243 LMTLIFMGGdFYSFF-----------FFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:PRK06076  249 LITTLFLGG-WLPPFplgggipgaiwFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 2-306 4.49e-72

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 226.05  E-value: 4.49e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   2 LYDLIMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSP 81
Cdd:MTH00029    3 IYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAP 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  82 VFSLMISLLVWMI--FPYLTYMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 159
Cdd:MTH00029   83 IISFTLAILAWAIvtMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISV 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 160 IILIGSFNMVDFMNYQLYCWFIIFSFPLALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIF 239
Cdd:MTH00029  163 ILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIIL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 240 MSMLMTLIFMGG-----------------------DFYSFFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLS 296
Cdd:MTH00029  243 MSCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLS 322

                         330
                  ....*....|
gi 1916859217 297 LNFFIFFAGL 306
Cdd:MTH00029  323 LGLVILTAGI 332
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-308 4.69e-65

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 206.29  E-value: 4.69e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  11 NFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSPVFSLMISLL 90
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  91 VWMIFPYLTYMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMVD 170
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 171 FMNYQLYCWFIIFsfplalscFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLMTLIFMG 250
Cdd:MTH00090  161 SFSLSLFVIYLPF--------LIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK 232

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1916859217 251 GDFYSFFFFVklgflaFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFAGLKV 308
Cdd:MTH00090  233 FSFLMLFLIF------SLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 6-303 4.63e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 165.10  E-value: 4.63e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   6 IMFVLNFLLLVICVLIsVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKeqpipiFSNYLLYYFSPVFSL 85
Cdd:MTH00058    2 FGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVK------FKVYGFQSRSWFSLF 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  86 MISLLVWMIFPY-LTYMCSFSYGF-----LFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 159
Cdd:MTH00058   75 GVFLLVLLVVFYcFIYGSYYSGSYsslslLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFC 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 160 IILIGSFNMVDFMnyqLYCWFIIFSFPLALSCFASC-LAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSII 238
Cdd:MTH00058  155 GLCYGSYSLVDFY---YSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIF 231

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916859217 239 FMSMLMTLIFMGGDFYSFFFFVKLGFlafcFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFF 303
Cdd:MTH00058  232 IFSWLGSVLFFGGGFVSIMLLFHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVI 292
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-311 5.43e-35

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 130.07  E-value: 5.43e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   2 LYDLIMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLLCKEQPIPIFSNYLLYYFSP 81
Cdd:CHL00032   23 VYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGP 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  82 ---VFSLMISLLVwMIFPYLTYMCSFSYGFLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:CHL00032  103 siaVISILLSYLV-IPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLS 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 159 LIILIGSFNMVDFM----NYQLYCW--------FIIFsfplalscFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGF 226
Cdd:CHL00032  182 ISLLSNSLSTVDIVeaqsKYGFWGWnlwrqpigFIVF--------LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKF 253

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 227 TLIFLAEYTSIIFMSMLMTLIFMGG-----------DFYS--------------FFFFVKLGFLAFCFIWVRGTLPRFRY 281
Cdd:CHL00032  254 GLFYVASYLNLLVSSLFVTVLYLGGwnlsipyifipELFEinktggvfgttigiFITLAKTYLFLFISITTRWTLPRLRM 333

                         330       340       350
                  ....*....|....*....|....*....|
gi 1916859217 282 DKLMYLAWKSFLPLSLNFFIFFAGLKVLLI 311
Cdd:CHL00032  334 DQLLNLGWKFLLPISLGNLLLTTSFQLLSL 363
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-303 3.28e-26

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 105.27  E-value: 3.28e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217   6 IMFVLNFLLLVICVLISVAFLTLFERKILGYIQIRKGPnkvgfvGIPQPFSDAIKLLCKEQPIPIfSNYLLYYFSPVFSL 85
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPE-TASWLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217  86 MISLLVWMIFPYLTYMCSFSYG--FLFFLCCTSFGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILI 163
Cdd:COG0650    74 AAMLLAALLVPVLTTGPPLSFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859217 164 GSFNMVDFMNYQLYCWFIIFSFPL---ALSCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:COG0650   154 GSTSLSDIVAYQAAHGPLLLSPSLllaAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1916859217 241 SMLMTLIFMGGDFYS------FFFFVKLGFLAFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFF 303
Cdd:COG0650   234 LSLFVNLFLPWGIALtlllalLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH