|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
4-576 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 698.05 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 4 FSICSLSFFSLFFSSTLLFILGIYYLLFDYSVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSG 83
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 84 ESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLN 163
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 164 FGSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLY 243
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 244 NFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLS 323
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 324 DTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSM 403
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 404 SGDNNFYSSFSFNDKSYYISFGMIFLLIVAVFGGSFLSWLIFPVPYMISLPYYLKFLTMFVVLLGGYLGYLVSEMNLSRV 483
Cdd:MTH00165 401 SGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 484 LFSLSGLSFVSFVGSMWFMPFLSTKLISYFPLKYGYLSSKSFDYGWGELFGGQGIYSLFIYLIEYIQGWYDSNFKIYLLT 563
Cdd:MTH00165 481 LKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLS 560
|
570
....*....|...
gi 1916859199 564 FIFWMLFLVIYFY 576
Cdd:MTH00165 561 FLLWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
23-575 |
1.58e-174 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 505.92 E-value: 1.58e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 23 ILGIYYLLFDYSVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMG 102
Cdd:MTH00151 20 PLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMN 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 103 FLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIYYYDFisdsFEM 182
Cdd:MTH00151 100 LLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSILSMWDF----KLS 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 183 SLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYN-FGWFLLIIGCMTMFMAG 261
Cdd:MTH00151 176 GWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSgFSSFLLFISLLTLLMAG 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 262 LGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMGSIVYFMPLT 341
Cdd:MTH00151 256 ISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLT 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 342 SVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFNDKSYY 421
Cdd:MTH00151 336 SGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDFY 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 422 ISFGMIFLLIVAVFGGSFLSWLIFPVPYMISLPYYLKFLTMFVVLLGGYLGYLVSEMNLSRVLFSLSGlsfvSFVGSMWF 501
Cdd:MTH00151 416 VSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVKLS----FFFSSMWF 491
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916859199 502 MPFLSTKLISYFPLKYGYLSSKSFDYGWGELFGGQGIYSLFIYLIEYIQGWYDSNFKIYLLTFIFWMLFLVIYF 575
Cdd:MTH00151 492 LSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLVVIS 565
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
26-575 |
1.22e-172 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 501.10 E-value: 1.22e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 26 IYYLLFDYSVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLI 105
Cdd:MTH00209 21 VIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 106 ISPNLISILLGWDGLGLVSYCLVIYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNyIYYYDFISDSfeMSLI 185
Cdd:MTH00209 101 FVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN-IFYLNFNSNL--GSVI 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 186 TVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLN-LYNFGWFLLIIGCMTMFMAGLGA 264
Cdd:MTH00209 178 SVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFsSPFFSMSLLLLGSLTTLMASMSA 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 265 NFEFDLKKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMGSIVYFMPLTSVC 344
Cdd:MTH00209 258 NVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSIC 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 345 FNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFNDKSYYISF 424
Cdd:MTH00209 338 LNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLK 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 425 GMIFLLIVAVFGGSFLSWLIFPVPYMISLPYYLKFLTMFVVLLGGYLGYLVSEMNlsrvLFSLSGLSFVSFVGSMWFMPF 504
Cdd:MTH00209 418 PMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKN----FFLIKGYKVNYFLSQMWFLPD 493
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1916859199 505 LSTKLISYFPLKYGYLSSKSFDYGWGELFGGQGIYSLFIYLIEYIQGWYDSNFKIYLLTFIFWMLFLVIYF 575
Cdd:MTH00209 494 LSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGVILFM 564
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-575 |
1.35e-165 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 483.50 E-value: 1.35e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 1 MYMFSICSLSFFSLFFSSTLLFILGIYYLLFDYSVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDY 80
Cdd:MTH00207 1 LRMFKPSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 81 MSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYSAGMLTALSNRIGDVAILISIAW 160
Cdd:MTH00207 81 MQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 161 MLNFGSWNYIYYYDfisdSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML 240
Cdd:MTH00207 161 TLNQGHWSITNMWQ----TDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 241 N-LYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMI 319
Cdd:MTH00207 237 SsTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 320 HNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLF 399
Cdd:MTH00207 317 HSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFT 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 400 YYSMSGDNNFYSSFSFNDKSYYISFGMIFLLIVAVFGGSFLSWLIFPVPYMISLPYYLKFLTMFVVLLGGYLGYLVSEMN 479
Cdd:MTH00207 397 LAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPN 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 480 LSRVLFSLSGLSFVSFVGSMWFMPFLSTKLISYFPLKYGYLSSKSFDYGWGELFGGQGIYSLFIYLIEYIQGWYDSNFKI 559
Cdd:MTH00207 477 ITKTPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNN 556
|
570
....*....|....*.
gi 1916859199 560 YLLTFIFWMLFLVIYF 575
Cdd:MTH00207 557 YLMMSFVLLTIIIIMT 572
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
34-575 |
4.91e-119 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 364.66 E-value: 4.91e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 34 SVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISI 113
Cdd:MTH00211 56 TILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 114 LLGWDGLGLVSYCLVIYYQNVSSYSAGMLTAL-SNRIGDVAILISIAWML-NFGSWNYIYYYDFisdSFEMSLITVLIIL 191
Cdd:MTH00211 136 FIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMVWLLlNLNSWEISQLFIL---NLDLTLFLLGLLL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 192 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM-LNLYNFGWFLLIIGCMTMFMAGLGANFEFDL 270
Cdd:MTH00211 213 AAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLfQNNQLILGAVLLLGALTMLFGALCALTQNDI 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 271 KKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSL 350
Cdd:MTH00211 293 KKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSL 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 351 SLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFNDKSYYISFGMIFLL 430
Cdd:MTH00211 373 ALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLA 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 431 IVAVFGGSFLSWLIFPVPYMI-SLPYYLKFLTMFVVLLGGYLGYLVseMNLSRVLFSLSGLSFVSFvgsMWFMPFLSTKL 509
Cdd:MTH00211 453 LGSILAGFIITSNLPPEKPEIlSLPFLLKLMPLLVTIVGLLLGLEL--VNLTHKQLKTSTLSFSNM---LGYYPPIIHRL 527
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1916859199 510 ISYFPLKYG-YLSSKSFDYGWGELFGGQGIYSLFIYLIEYIQGWYDSNFKIYLLTFIFWMLFLVIYF 575
Cdd:MTH00211 528 LPKLSLKWGqTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLF 594
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
39-475 |
1.97e-98 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 311.70 E-value: 1.97e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 39 WELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWD 118
Cdd:COG1009 62 YTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 119 GLGLVSYCLVIYYQNVSSYSAGMLTA-LSNRIGDVAILISIAWMLN-FGSWNY---IYYYDFISDSFEMSLITVLIILAA 193
Cdd:COG1009 142 LVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGTLNFselLAAAPTILSSPLLTLILLLLLLGA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 194 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNF-GWFLLIIGCMTMFMAGLGANFEFDLKK 272
Cdd:COG1009 222 FGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVwLTVVAIIGAITALFAALIALAQTDIKR 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 273 IIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLSdTQDIRFMGSIVYFMPLTSVCFNVSSLSL 352
Cdd:COG1009 302 VLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG-TRDIRKMGGLRKKMPITAITFLIGALSL 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 353 CGLPFLAGFYSKDLILE-LVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFNDKSYYISFGMIFLLI 431
Cdd:COG1009 381 AGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAV 460
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1916859199 432 VAVFGGSFLSWL---------IFPVPYMISLPYYLKFLTMFVVLLGGYLGYLV 475
Cdd:COG1009 461 LSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
23-573 |
3.09e-98 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 311.52 E-value: 3.09e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 23 ILGIYYLLFD----YSVFVEWelFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFI 98
Cdd:MTH00208 71 INLLIWILLGcpniNISLSNW--LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 99 LSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYSAGMLTA-LSNRIGDVAILISIAW-MLNFGSWNYIYYYDFI 176
Cdd:MTH00208 149 LNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsLINFNSWNLNEILSLN 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 177 S-DSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNlyNFGWFL---LII 252
Cdd:MTH00208 229 NsNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLIS--NSPWFLslcLIL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 253 GCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMG 332
Cdd:MTH00208 307 GSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMG 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 333 SIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSS 412
Cdd:MTH00208 387 GLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPL 466
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 413 FSFNDKSYYISFGMIFLLIVAVFGGSFLSWLIFPVPyMISLPYYLKFLTMFVVLLGGYLGYLVSeMNLSRVLFSLSGLSF 492
Cdd:MTH00208 467 SPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFSFSFL-LSLSSNPINSNFFSF 544
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 493 VSFvgsMWFMPFLSTKLISYFPLKYG-YLSSKSFDYGWGELFGGQGIYSLFIYLIEYIQGWYDSNFKIYLLTFIFWMLFL 571
Cdd:MTH00208 545 LSN---QWFFVNISHSIIISFSFFTSlFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLI 621
|
..
gi 1916859199 572 VI 573
Cdd:MTH00208 622 LT 623
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
39-472 |
1.03e-97 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 309.40 E-value: 1.03e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 39 WELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWD 118
Cdd:MTH00004 66 WPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 119 GLGLVSYCLVIYYQNVS-SYSAGMLTALSNRIGDVAILISIAWM-LNFGSWNYiyyyDFISDSFEMSLITVL-IILAAMT 195
Cdd:MTH00004 146 GVGIMSFLLIGWWSGRAeANTAALQAIIYNRIGDIGLILSMAWLaMTLNTWEI----QQLFSPTQTPTLPLLgLILAATG 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 196 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFGWFL-LIIGCMTMFMAGLGANFEFDLKKII 274
Cdd:MTH00004 222 KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTIcLCLGALTTLFAATCALTQNDIKKII 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 275 ALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCG 354
Cdd:MTH00004 302 AFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMG 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 355 LPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFNDKSYYISFGMIFLLIVAV 434
Cdd:MTH00004 382 TPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSI 461
|
410 420 430
....*....|....*....|....*....|....*....
gi 1916859199 435 FGGSFLSWLIFPV-PYMISLPYYLKFLTMFVVLLGGYLG 472
Cdd:MTH00004 462 LAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLA 500
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
34-575 |
1.44e-92 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 296.05 E-value: 1.44e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 34 SVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISI 113
Cdd:MTH00066 59 SITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 114 LLGWDGLGLVSYCLV-IYYQNVSSYSAGMLTALSNRIGDVAILISIAW-MLNFGSWNYIYYydFISDSFEMSLITVLIiL 191
Cdd:MTH00066 139 FIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWELQQI--FLLNDNSTLPLLGLI-L 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 192 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-NLYNFGWFLLIIGCMTMFMAGLGANFEFDL 270
Cdd:MTH00066 216 AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLeNNQTALTICLCLGALTTLFTAACALTQNDI 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 271 KKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSL 350
Cdd:MTH00066 296 KKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSL 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 351 SLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFNDKSYYISFGMIFLL 430
Cdd:MTH00066 376 ALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLA 455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 431 IVAVFGGSFLSWLIFPVPYMI-SLPYYLKFLTMFVVLLGGYLGYLVSEMNLSRVLFSLSglsfVSFVGSMWFMPFLSTKL 509
Cdd:MTH00066 456 WGSIIAGLLIIFNILPMKPQIlTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKM----HSFSNLLAFFPTIIHRL 531
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1916859199 510 ISYFPLKYGY-LSSKSFDYGWGELFGGQGIYSLFIYLIEYIQGWYDSNFKIYLLTFIFWMLFLVIYF 575
Cdd:MTH00066 532 SPKTNLNSGQnIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLMLILL 598
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
51-468 |
2.02e-87 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 282.51 E-value: 2.02e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 51 MTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV-I 129
Cdd:MTH00108 78 LSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIgW 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 130 YYQNVSSYSAGMLTALSNRIGDVAILISIAW-MLNFGSWNYIYYydFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPA 208
Cdd:MTH00108 158 WYGRTDANTAALQAILYNRIGDIGFILAMAWfLLNLNSWDLQQI--FMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPS 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 209 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFGWFL-LIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMS 287
Cdd:MTH00108 236 AMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLtLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 288 ILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLI 367
Cdd:MTH00108 316 TIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLI 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 368 LELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFNDKSYYISFGMIFLLIVAVFGGSFLSWLIFP- 446
Cdd:MTH00108 396 IEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPt 475
|
410 420
....*....|....*....|...
gi 1916859199 447 -VPYMiSLPYYLKFLTMFVVLLG 468
Cdd:MTH00108 476 tIPQM-TMPLYLKLTALAVTILG 497
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
39-475 |
7.63e-86 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 278.78 E-value: 7.63e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 39 WELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWD 118
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 119 GLGLVSYCLV-IYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNY--IYYYDFISDSFEMSLITVLIILAAM 194
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFqeVFALAPGAFFSALTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 195 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYN-FGWFLLIIGCMTMFMAGLGANFEFDLKKI 273
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPtALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 274 IALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLC 353
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 354 GLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFNDKSYYISFGMIFLLIVA 433
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1916859199 434 VFGGSFLSWLIFPVPYMI-----------SLPYYLKFLTMFVVLLGGYLGYLV 475
Cdd:TIGR01974 465 VFAGFFIVPLFEFLKGVLptsaepalehhHVPALEIWSPTAVAILGILLAYLL 517
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
51-474 |
1.18e-84 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 275.88 E-value: 1.18e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 51 MTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV-I 129
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIgF 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 130 YYQNVSSYSAGMLTALSNRIGDVAILISIAWML-NFGSWNYIYYYDFISDSFEMS-----LITVLIILAAMTKSAQIPFS 203
Cdd:PRK06590 158 WYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFaEFGSLNYDEVFAAAPQFFGLGwsaltLICLLLFIGAMGKSAQFPLH 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 204 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLY-NFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQL 282
Cdd:PRK06590 238 TWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSpEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 283 GLMMsiLAMG---YSkLAFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLA 359
Cdd:PRK06590 318 GYMF--LALGvgaYA-AAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFA 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 360 GFYSKDLILElVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNfYSSFSFNDKSYYISFGMIFLLIVAVFGG-- 437
Cdd:PRK06590 395 GFFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLIFLVFHGKEK-EKIHHPHESPAVMTLPLIVLAVLSVFAGal 472
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1916859199 438 ---SFLSWLIFP-----VPYMISLPYYLKFLTMFVVLLGGYLGYL 474
Cdd:PRK06590 473 ivpPFLGVLPLTtelahGEAEHHLPVWVALLPLVVALAGIALAWL 517
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
56-403 |
6.30e-83 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 270.93 E-value: 6.30e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 56 DWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV-IYYQNV 134
Cdd:MTH00137 87 DHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIgWWYGRA 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 135 SSYSAGMLTALSNRIGDVAILISIAWML-NFGSWNyIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMAAP 213
Cdd:MTH00137 167 DANTAALQAVIYNRVGDIGLILAMAWMAtNLNSWE-IQQIFALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGP 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 214 TPVSALVHSSTLVTAGVYLLIRFSPMLNlyNFGWFLLIIGCM----TMFMA--GLGANfefDLKKIIALSTLSQLGLMMS 287
Cdd:MTH00137 246 TPVSALLHSSTMVVAGIFLLIRLSPLME--NNQTALTTCLCLgaltTLFTAtcALTQN---DIKKIVAFSTSSQLGLMMV 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 288 ILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLI 367
Cdd:MTH00137 321 TIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAI 400
|
330 340 350
....*....|....*....|....*....|....*..
gi 1916859199 368 LELVCLSWINFLIFFLYFFSTGLTAAYSFRL-FYYSM 403
Cdd:MTH00137 401 IEALNTSHLNAWALTLTLIATSFTAVYSLRVvFFVSM 437
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
39-573 |
1.50e-75 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 251.53 E-value: 1.50e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 39 WELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWD 118
Cdd:MTH00020 62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 119 GLGLVSYCLV-IYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYDFIS--DSFEMSLITVLIILAAM 194
Cdd:MTH00020 142 GVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFSSVFNMVVsaPSSDITLICLFLFIGAV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 195 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFGWFLL-IIGCMTMFMAGLGANFEFDLKKI 273
Cdd:MTH00020 222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKV 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 274 IALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLC 353
Cdd:MTH00020 302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 354 GLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYS-MSGDNNFYSSFSF-NDKSYYISFGMIFLLI 431
Cdd:MTH00020 382 GFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTfLSNTNLKKAVFFHlHEGDWNLLLPLGILAL 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 432 VAVFGGSFLSWLIFPVPYMISLPYYLKFLTMFVVL-LGGYLGYLVSEMNLS---RVLFSLSGLSFVSFVGSMWFMPFLST 507
Cdd:MTH00020 462 GSIFVGYLAKEMIWSFQITLPPIVPLSIKLLPVFLsLGGIGLVIILYFYSSktfRVPFSFIGRNSYTFLGSAWQFNYILN 541
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1916859199 508 KLISYFPLKYGYL-SSKSFDYGWGELFGGQGIYSLFIYLIEYIQGWY-DSNFKIYLLTFIFWMLFLVI 573
Cdd:MTH00020 542 YFLIKKIWKGGHLiSYRTIDKGVLELVGPKGISNFLIILTQGLSSLQsGLVFNYALVILIGVAIFIWG 609
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
53-574 |
2.01e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 246.07 E-value: 2.01e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 53 LILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV-IYY 131
Cdd:MTH00210 76 LQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 132 QNVSSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYDFISDSFE---MSLITVLIILAAMTKSAQIPFSSWLP 207
Cdd:MTH00210 156 TRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLLVTNINkesLTIICLLLFIGAVGKSAQLGLHTWLP 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 208 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFGWFLL-IIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMM 286
Cdd:MTH00210 236 DAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 287 SILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDL 366
Cdd:MTH00210 316 MVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDL 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 367 ILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFN--DKSYYISFGMIFLLIVAVFGGS-----F 439
Cdd:MTH00210 396 ILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGvhESSWNITFPLLLLAFGSIFVGYlgkevV 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 440 LSWLIFPVpymisLPYYLKFLTMFVVLLGGYLGYLV------SEMNLSRVLFSLSGLSFVSFVGSMWFMPFLSTKLISYF 513
Cdd:MTH00210 476 LSNVIPPI-----VPNSIKMIPLLFSLLGALLAFVIynsmvfLIKISRRGVSIRLYHVIYTFLNSAWQFNYVINHFIVKN 550
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1916859199 514 PLKYGYL-SSKSFDYGWGELFGGQGIYSLFIYLIEYIQGWYDSNFKIYLLT-FIFWMLFLVIY 574
Cdd:MTH00210 551 IWKFGHLiTYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALImIIFTTLFISGA 613
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
36-519 |
6.28e-64 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 218.25 E-value: 6.28e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 36 FVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILL 115
Cdd:MTH00095 24 FMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 116 GWDGLGLVSYCLVIYYQNVSSYSAGMLTALSNRIGDVAILIsiawmlnFGSWNYIYYYDFISDSFEMSLITVLIILAAMT 195
Cdd:MTH00095 104 SWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFL-------FFSGFIFSSYYFFSFSFFSSSMILMLLLTSFT 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 196 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIA 275
Cdd:MTH00095 177 KSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 276 LSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGL 355
Cdd:MTH00095 257 LSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGL 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 356 PFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYysmsgdnNFYSSFSFNDKSYYISFGMIFLLIVAVF 435
Cdd:MTH00095 337 MFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWK-------SFFLSFSKVVNVYSSSVLMNFLSLMLVF 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 436 GG-SFLSWLIFpvpYMISLPYYLKFLTMFVVLLGGYLGYLVSEMNLSRVLFSLSGLSFVSFVGSMWFMPFLSTKLISYFP 514
Cdd:MTH00095 410 FSvFFLWWLNF---NLLNLPSLFLYLDFYVPLFYLFMIMLFSFFFFKLLFKELKYKFFVDYFAKNVIYKLKNLKFFDLFL 486
|
....*
gi 1916859199 515 LKYGY 519
Cdd:MTH00095 487 NKFGY 491
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
51-406 |
2.83e-62 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 217.20 E-value: 2.83e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 51 MTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV-I 129
Cdd:PRK07376 85 MGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVgF 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 130 YYQNVSSYSAGMLTALSNRIGDVAILISIA---WMLnfGSWNYIYYYDFISDSFEMS--------LITVLIILAAMTKSA 198
Cdd:PRK07376 165 WYDRKGAADAAQKAFVVNRVGDFGLLLGILglfWAT--GSFDFDGIADRLSELVSSGavsgwlalLLCILVFLGPMAKSA 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 199 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNF-GWFLLIIGCMTMFMAGLGANFEFDLKKIIALS 277
Cdd:PRK07376 243 QFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAvMTVIAWTGAITAFLGASIALTQNDIKKGLAYS 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 278 TLSQLGLMMsiLAMG---YSKlAFFHLLTHALFKALLFMCAGSMIHNLSDT--------QDIRFMGSIVYFMPLTSVCFN 346
Cdd:PRK07376 323 TISQLGYMV--MAMGcgaYSA-GLFHLMTHAYFKAMLFLGSGSVIHGMEEVvghdpvlaQDMRLMGGLRKYMPITAITFL 399
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 347 VSSLSLCGLPFLAGFYSKDLILELVCLSwiNFLIFFLYFFSTGLTAAYSFRLFYYSMSGD 406
Cdd:PRK07376 400 IGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLTFEGE 457
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
53-574 |
2.96e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 203.65 E-value: 2.96e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 53 LILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQ 132
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 133 N-VSSYSAGMLTALSNRIGDVAILISIAWM------LNFGSWNYIYYYDFISDS------------FEMSLITVLIILAA 193
Cdd:MTH00032 156 TrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsLDFLTFNGGSVGSGIMDRgyygggayesplAPFAIIGILLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 194 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFGWFLL-IIGCMTMFMAGLGANFEFDLKK 272
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIItIFGALTAFFAATVGLVQNDLKK 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 273 IIALSTLSQLGLMMSILAM-GYSKLAFFHLLTHALFKALLFMCAGSMIHNLS-DTQDIRFMGSIVYFMPLTSVCFNVSSL 350
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSF 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 351 SLCGLPFLAGFYSKDLILELV------------CLSWINFLI------------------------FFLYFFSTGLTAAY 394
Cdd:MTH00032 396 SIMGLPYLTGFYSKDLILELTysgrnmgipfgsSLLKIQGDIgikkddrgsiggpegypsrgsafaFWLGTVAALLTAFY 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 395 SFRLFYYSMSGDNNFYSSFSFNDKSYYISFGMIFLLIVAVFGGSFLSWLIFPV-----------PYMISLPYYLKFLTMF 463
Cdd:MTH00032 476 SIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIQDIligdiehpivpPLIKVMPTLMGLFGMG 555
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 464 VVLLGGYLGYLVSEMNLSRVLFSLSGLSFVSFVGSMWFMPFLSTKLISYFPLKYGYLSS-KSFDYGWGELFGGQGIYSLF 542
Cdd:MTH00032 556 LCLWAQKGTREGELYWGFDPIGPSFLLSIYSFLGGAWQGDHLINKLVAIPLFSFGHWGIyKTLDRGWLELFGPQGISTIA 635
|
570 580 590
....*....|....*....|....*....|...
gi 1916859199 543 IYLIEYIQGWYDSNFKIYLLTFI-FWMLFLVIY 574
Cdd:MTH00032 636 LRVSQFISNLQSGVISRYALVLLsFTIIFLALW 668
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
107-387 |
1.30e-53 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 184.05 E-value: 1.30e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 107 SPNLISILLGWDGLGLVSYCLVIYY-QNVSSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIY----YYDFISDSFE 181
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 182 MSLITVLIILAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLNLYNFGW--FLLIIGCMTMF 258
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIqqILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 259 MAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMGSIV 335
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1916859199 336 YFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFS 387
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
52-397 |
5.17e-49 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 183.08 E-value: 5.17e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 52 TLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 131
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 132 QNVSSYSAGMLTALS-NRIGDVAILisiAWMLNFGSwnyiyyydfISDSFEMS----------------LITVLIILAAM 194
Cdd:PRK12648 151 HHRADARRGARMALTvTGAGGLALL---AGVLLLGH---------IVGSYDLDvvlaagdlirahplypPALVLILLGAF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 195 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNlynfG---WFLLI--IGCMTMFMAGLGANFEFD 269
Cdd:PRK12648 219 TKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLA----GteeWFWIVggAGLITLLLGAYFALFQHD 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 270 LKKIIALSTLSQLGLMMSILAMGySKLA----FFHLLTHALFKALLFMCAGSMIHNlSDTQDIRFMGSIVYFMPLTSVCF 345
Cdd:PRK12648 295 LKGLLAYSTISHLGLITLLLGLG-SPLAavaaIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLA 372
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859199 346 NVSSLSLCGLPFLAGFYSKDL----ILELVCLSWINFLIFFLYFFSTGLTAAYSFR 397
Cdd:PRK12648 373 MVAAAAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLR 428
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-401 |
7.04e-49 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 175.34 E-value: 7.04e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 52 TLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 131
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 132 QNVSSYSAGMLTALSNRIGDVAILISIAWM-LNFGSWNYIYYYDFIS--DSFEMSLITVLIILAAMTKSAQIPFSSWLPA 208
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLAelDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 209 AMA-APTPVSALVhSSTLVTAGVYLLIRFS----PMLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG 283
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLtllfGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 284 LMMSILAMGYSKL---AFFHLLTHALFKALLFMCAGSMIHNLsDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAG 360
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1916859199 361 FYSKDLILELVcLSWINFLIFFLYFFSTGLTAAYSFRLFYY 401
Cdd:COG0651 389 FVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
45-369 |
2.94e-48 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 180.62 E-value: 2.94e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 45 NGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVS 124
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 125 YCLvIYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNY--IYYYDFISD-SFEMSLITVLIILAAMTKSAQI 200
Cdd:PRK12650 147 FFL-IARSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATqTGTTSLsgILHSDVWAEkPGLTTVVAVLIAVAAFTKSAQF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 201 PFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-NLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTL 279
Cdd:PRK12650 226 PFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 280 SQLGLMMSILAMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNlSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLP 356
Cdd:PRK12650 306 SQLGWIVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVP 384
|
330
....*....|...
gi 1916859199 357 FLAGFYSKDLILE 369
Cdd:PRK12650 385 PLFGFVSKEGMLT 397
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
55-369 |
2.09e-46 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 174.34 E-value: 2.09e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 55 LDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY-YQN 133
Cdd:PRK12647 62 LDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFnHER 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 134 VSSYSAGMLTALSNRIGDVAILI------------SIAWMLNFGswnyiyyyDFISDSFEMSLITVLIILAAMTKSAQIP 201
Cdd:PRK12647 142 EAARRAALQALLVTGGGGLALLAglillgnvtgtySLSELLASG--------DVIREHPLYLAILLLVLGGAFTKSAQFP 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 202 FSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-NLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLS 280
Cdd:PRK12647 214 FHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLgGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVS 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 281 QLGLMMSILAMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNlSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPF 357
Cdd:PRK12647 294 ALGTLVMLLGLGSElaiKAAVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMAGLPP 372
|
330
....*....|..
gi 1916859199 358 LAGFYSKDLILE 369
Cdd:PRK12647 373 LFGFLAKELIYE 384
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
52-369 |
4.85e-46 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 173.49 E-value: 4.85e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 52 TLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 131
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 132 -QNVSSYSAGMLTALSNRIGDVAILISIAWML----NFGSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWL 206
Cdd:TIGR00940 150 hHRAHSRYGAQKSLTITVFGGLAMLGGLILLGkitgSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 207 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSP-MLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM 285
Cdd:TIGR00940 230 PDAMEAPTPVSAYLHSATMVKAGLYLLARFTPvFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 286 MSILAMGYSKL----------------AFFHLLTHALFKALLFMCAGSMIHNlSDTQDIRFMGSIVYFMPLTSVCFNVSS 349
Cdd:TIGR00940 310 MVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIAS 388
|
330 340
....*....|....*....|
gi 1916859199 350 LSLCGLPFLAGFYSKDLILE 369
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKEMFFA 408
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
72-424 |
2.24e-45 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 170.84 E-value: 2.24e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 72 LVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV-IYYQNVSSYSAGMLTALSNRIG 150
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 151 DVAILISIA---WMLN-------FGSWNYIYYYDFISDSFeMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALV 220
Cdd:CHL00025 186 DFGLLLGILgfyWITGsfefrdlFEIFNNLIYNNEVNLLF-ATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALI 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 221 HSSTLVTAGVYLLIRFSPMLNLYNFGWFLL-IIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKLAFF 299
Cdd:CHL00025 265 HAATMVAAGIFLVARLLPLFIVIPYIMNLIsLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALF 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 300 HLLTHALFKALLFMCAGSMIHNL--------SDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILElv 371
Cdd:CHL00025 345 HLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILN-- 422
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1916859199 372 cLSWINFLIF-FLYFFSTGLTAAYSFRLFYYSMSGD---NNFYSSFSFNDKSYYISF 424
Cdd:CHL00025 423 -DSWLYSPIFaIIAWSTAGLTAFYMFRIYLLTFEGHlrvHFQNYSGKKNSSFYSISL 478
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
55-369 |
1.63e-43 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 166.08 E-value: 1.63e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 55 LDWMSLIFMSFVMYISSLVIYYSEDYMSGES-NMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY-YQ 132
Cdd:PRK12646 76 LDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYwYN 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 133 NVSSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIY----YYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPA 208
Cdd:PRK12646 156 NGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeilgQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPR 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 209 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNF-GWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMS 287
Cdd:PRK12646 236 AMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMyIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMA 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 288 ILAMG----------YSKL-------AFFHLLTHALFKALLFMCAGSMIHNlSDTQDIRFMGSIVYFMPLTSVCFNVSSL 350
Cdd:PRK12646 316 MVGIGggyaqhqqdaIASIyvfvlfaALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIAAL 394
|
330
....*....|....*....
gi 1916859199 351 SLCGLPFLAGFYSKDLILE 369
Cdd:PRK12646 395 SMAGVPFLNGFLSKEMFLD 413
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
52-400 |
5.68e-43 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 165.10 E-value: 5.68e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 52 TLILDWMSLIFMSFVMYISSLVIYYSEDYM-SGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 130
Cdd:PRK12644 69 AFRLDALAALMSLLVLGVGALVLLYCARYFdDDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGH 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 131 Y-QNVSSYSAGMLTALSNRIGDVAILISIAWMLNF-GSWNYiyyYDFISDSFEMSLIT---VLIILAAMTKSAQIPFSSW 205
Cdd:PRK12644 149 YaERAASRRAALQALLVTTAGGLAMLVGIIILGQAaGTYRL---SELLADPPTGPAVSvavVLILVGALSKSAIVPFHFW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 206 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLN-LYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGL 284
Cdd:PRK12644 226 LPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFAdVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGF 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 285 MMSILAMGYSKLAFFHL---LTHALFKALLFMCAGSMIHNlSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGF 361
Cdd:PRK12644 306 LTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGF 384
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1916859199 362 YSKDLILELV----CLSWINFLIFFLYFFSTGLTAAYSFRLFY 400
Cdd:PRK12644 385 VAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLRFLW 427
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
34-577 |
1.90e-42 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 159.66 E-value: 1.90e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 34 SVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISI 113
Cdd:MTH00063 22 SSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLST 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 114 LLGWDGLGLVSYCLVIYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNyiyyydfisdsfemSLITVLIILAA 193
Cdd:MTH00063 102 LIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGS--------------FLCCLFFFLIV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 194 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKI 273
Cdd:MTH00063 168 FTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKI 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 274 IALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLC 353
Cdd:MTH00063 248 VALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYGSWNLFYLFLLVLGLS 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 354 GLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSFndkSYYISFGMIFLliva 433
Cdd:MTH00063 328 GVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLILFGVKSSLSSGVRF---LFFNSGLMVFL---- 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 434 vfgGSFLSWLIFP-VPYMISLPYYLKFLTMFVVLLGGYLGYLVSEMNL-SRVLFSLSGLSFVSFVGSMWFMPFLSTKLIS 511
Cdd:MTH00063 401 ---WLFINYYVFLlLDEVVYLGVFISLVLLLVQLLGLLVGVLFYDSNLfSNWSSSLFGCDNLVELFYELFYSILDLVSLF 477
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859199 512 YFplkygylsskSFDYGWGELFGGQGIYSLFIYLIeyiqgwydsnfkIYLLTFIFWMLFLVIYFYV 577
Cdd:MTH00063 478 FF----------RWEIYLIELLCGVGSSSSLLYSW------------FSLNLLLLSLFFLLIYLLI 521
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
52-405 |
5.05e-42 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 161.63 E-value: 5.05e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 52 TLILDWMSLIFMSFVMYISSLVIYYSEDYMSGES-NMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 130
Cdd:PRK12645 73 TLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISY 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 131 YQN--VSSYSA--GMLTALSNRIGDVAILISIAWMLnfGSWN---YIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFS 203
Cdd:PRK12645 153 WYEreASRYGAqkSMLITVFGGLSMLGGFILLYIMT--GSFSireMIANADEIQNSPLFIPAMILILLGAFTKSAQFPFY 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 204 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNfGWFLLI--IGCMTMFMAGLGANFEFDLKKIIALSTLSQ 281
Cdd:PRK12645 231 IWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQ-VWFWTVtlVGLITLFWGSLNAVKQTDLKGILAFSTVSQ 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 282 LGLMMSILAMGYSKL----------------AFFHLLTHALFKALLFMCAGSMIHNlSDTQDIRFMGSIVYFMPLTSVCF 345
Cdd:PRK12645 310 LGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFTIA 388
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1916859199 346 NVSSLSLCGLPFLAGFYSKDLILE---------LVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSG 405
Cdd:PRK12645 389 LIGALSMAGLPPFNGFLSKEMFFEsmlnateanLFSLDTWGVLFPVIAWVASVFTFVYSIIFIFKTFFG 457
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
394-575 |
1.22e-41 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 148.08 E-value: 1.22e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 394 YSFRLFYYSMSGDNNFYSSFSFNDKSYYISFGMIFLLIVAVFGGSFLSWLIFPVPYMISLPYYLKFLTMFVVLLGGYLGY 473
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 474 LVSEMNLSRVLFSLSGlSFVSFVGSMWFMPFLSTKLISYFPLKYGYLSSKSFDYGWGELFGGQGIYSLFIYLIEYIQGWY 553
Cdd:pfam06455 81 ELSNLSNKQLKKSLNF-NLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170 180
....*....|....*....|..
gi 1916859199 554 DSNFKIYLLTFIFWMLFLVIYF 575
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
23-368 |
4.42e-39 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 149.35 E-value: 4.42e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 23 ILGIYYLLFDYSVFVEWELFNLnGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMS-------GESNMNRFIIIVL 95
Cdd:PRK06525 42 LSLAYAFYQAGKVAVTLTLVNL-GDVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 96 MFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIYYYDF 175
Cdd:PRK06525 121 LFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSG 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 176 ISDSFEmSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLY--NFGWFLLIIG 253
Cdd:PRK06525 201 LHGSLK-YLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIphVIGYVGAVMA 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 254 CMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGY--SKLAF----FHLLTHALFKALLFMCAGSMIHNLSdTQD 327
Cdd:PRK06525 280 IVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAIlgSRLALegsiAYIFNHAFAKSLFFLVAGALSYSCG-TRL 358
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1916859199 328 IRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIL 368
Cdd:PRK06525 359 LPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
49-369 |
5.24e-35 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 140.73 E-value: 5.24e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 49 VVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV 128
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 129 IYYQN--VSSYSAG---MLTALSNRIGDVAILISIAWMLNFGSWNYIYYYDFISD--SFEMSLIT-VLIILAAMTKSAQI 200
Cdd:PRK12649 152 GYWRHrpESVYGATkslLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENikGHPLFLITlILIFIGAAAKSAQG 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 201 PFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNfGWFLLI--IGCMTMFMAGLGANFEFDLKKIIALST 278
Cdd:PRK12649 232 PFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTE-AWFILVsgTGMITMVLAGFLAFRQTDIKAILAYST 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 279 LSQLGLMMSIlaMGYSK---------LAFFHLLTHALFKALLFMCAGSMIHNLSdTQDIRFMGSIVYFMPLTSVCFNVSS 349
Cdd:PRK12649 311 ISQLAYLMTM--YGYTTyhepglgvaAATFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAA 387
|
330 340
....*....|....*....|
gi 1916859199 350 LSLCGLPFLAGFYSKDLILE 369
Cdd:PRK12649 388 LAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-401 |
6.65e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 128.84 E-value: 6.65e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 52 TLILDWMSLIFMSFVMYISSLVIYYSedYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 131
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 132 QNVSSYSAGMLTALSNRIGDVAILISIAWMLNF-GSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPAAM 210
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVtGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 211 AAPTPVSALVHSSTLVTAGVYLLIRFS------PMLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGL 284
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIYftvfggDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 285 MMSILAMGYSKL---AFFHLLTHALFKALLFMCAGSMIHNlSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGF 361
Cdd:PRK08375 310 ILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVT-YGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGF 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1916859199 362 YSK-DLILELVCLSWINFLIFFLyfFSTGLTAAYSFRLFYY 401
Cdd:PRK08375 389 VSKwYLVVGAVEAGQWLVLAVLL--ASSLLALLYFLRIWYR 427
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
96-374 |
8.34e-28 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 118.07 E-value: 8.34e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 96 MFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSS-YSAGMLTALSNRIGDVAILISIAWMlnfgsWNYIYYYD 174
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLL-----ARESGSYD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 175 FIS------DSFEMSLITVLIILAAMTKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPML---NLYN 244
Cdd:PRK06521 196 FAAmraahlSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLlgaPGWW 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 245 FGWFLLIIGCMTMFMAGLGANFEFDLKKIIALST-------LSQLGLMMSILAMGYSKLA-------FFHLLTHALFKAL 310
Cdd:PRK06521 275 WGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTienigiiFVGLGLAMVFIAYGMPLLAalaltaaLYHLLNHALFKSL 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916859199 311 LFMCAGSMIHNLSdTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVCLS 374
Cdd:PRK06521 355 LFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSS 417
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
58-317 |
2.46e-27 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 115.95 E-value: 2.46e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 58 MSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNvssY 137
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPD---R 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 138 SAGMLTA----LSNRIGDVAILISIA-WMLNFGSWNYIYYYDFISD---SFEMSLITVLIILAAMTKSAQIPFSSWLPAA 209
Cdd:PRK08168 147 PFARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLSALWAHLAAqgaSPSLQAAALLLVLAVILKTAQLPVHGWLIQV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 210 MAAPTPVSALVHSStLVTAGVYLLIRFSPMLNLYNFG-WFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSI 288
Cdd:PRK08168 227 MEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLE 305
|
250 260
....*....|....*....|....*....
gi 1916859199 289 LAMGYSKLAFFHLLTHALFKALLFMCAGS 317
Cdd:PRK08168 306 CGLGLYELALLHLVAHSLYKAHAFLSASE 334
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
63-400 |
1.25e-26 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 114.24 E-value: 1.25e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 63 MSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYSAGML 142
Cdd:PRK07390 95 LELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAAR 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 143 TA-LSNRIGDVAILISIAWMLNF-GSWNYIYYYDFIS----DSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPV 216
Cdd:PRK07390 175 DAfLTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAAtanlDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPA 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 217 SALvHSSTLVTAGVYLLIRFSPMLNLYNFGW-FLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSK 295
Cdd:PRK07390 255 SIL-RNSVVVATGAWVLIKLQPVLALSPVALtVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPD 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 296 LAFFHLLTHALFKALLFMCAGSMIHNlSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYS-KDLILELVCLS 374
Cdd:PRK07390 334 IALLLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWAlLRLADGLWAVS 412
|
330 340
....*....|....*....|....*.
gi 1916859199 375 WINFLIFFLYFFSTGLTAAYSFRLFY 400
Cdd:PRK07390 413 PWLVGVLLLVNALTAFNLTRVFRLVF 438
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
51-369 |
7.89e-26 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 112.13 E-value: 7.89e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 51 MTLILDWMSLIFMSFVMYISSLVIYYSEDY---MSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCL 127
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 128 VIY-YQNVSSYSAGMLTALSNRIGDVAILISIAWM-LNFGSWNYIYYYdfiSDSFEMSLITVLIILAAMTKSAQIPFSSW 205
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLfIQTGSFELSPLG---ASAGILSLVFLLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 206 LPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFspMLNLYN----FGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLS 280
Cdd:PRK08667 228 LPYAHpASPSNVSALM-SGVMLKVAVYGLVRF--LMDVLSpelwWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIE 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 281 QLGLMM--------------SILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHnLSDTQDIRFMGSIVYFMPLTSVCFN 346
Cdd:PRK08667 305 NIGIILmgiglyvifgvyglDTLALLALGGALFHSLNHALFKSLLFLTAGSVVH-ATGTRNIEKMGGLVKLMPYTSALFL 383
|
330 340
....*....|....*....|...
gi 1916859199 347 VSSLSLCGLPFLAGFYSKDLILE 369
Cdd:PRK08667 384 VGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-400 |
2.17e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 106.82 E-value: 2.17e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 53 LILDWMSLIFMSFVMYISSLVIYYSEDYMSGES--NMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 130
Cdd:PRK06589 79 LHLEPLGLIFLLLIGFLWICALLYTPKYLAINNidSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGH 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 131 YQNVSSYSAGmLTALSNRIGDVAILISIAWMLNFGSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPAAM 210
Cdd:PRK06589 159 TRNNISLSGG-YKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAM 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 211 AAPTPVSALVHSSTLVTAGVYLLIR-------FSPMLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG 283
Cdd:PRK06589 238 VAHYPVSALLHAVIVVKTGLFCIYKillyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLS 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 284 LMM---SILAMGYSKLAFFHLLTHALFKALLFMCAGSmIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAG 360
Cdd:PRK06589 318 LALlsaFILTPKALGAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSG 396
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1916859199 361 FYSKDLILELVCLS---WINFLIFFLYFFSTGLTAAYSFRLFY 400
Cdd:PRK06589 397 FISKFLILLAASEQnqpWLSIIVMLVVIASSILSALYLLKILS 439
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-400 |
6.03e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 105.56 E-value: 6.03e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 55 LDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNV 134
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 135 -SSYSAGMLTALSNRIGDVAILISIAWML-NFGSWNYIYYYDFISDSFEMSLITVLIILAA--MTKSAQIPFSSWLPAAM 210
Cdd:PRK08376 168 wEAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLAVKMSENPTVVAKIALALFIAglAMKSGAVPVHMWLPDAY 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 211 -AAPTPVSALVHSSTLvtAGVYLLIR-----FSPMLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGL 284
Cdd:PRK08376 248 pAAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGY 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 285 MM-----SILAMGYSKL----------AFFHLLTHALFKALLFMCAGSMIHNLSdTQDIRFMGSIVYFMPLTSVCFNVSS 349
Cdd:PRK08376 326 MLlglgvGLAALGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFLIGA 404
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1916859199 350 LSLCGLPFLAGFYSKDLILELVCLswINFLIFFLYFFSTGLTAAYSFRLFY 400
Cdd:PRK08376 405 AAIVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLASFVKVFH 453
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
84-475 |
9.51e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 104.65 E-value: 9.51e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 84 ESNMNRFIIIVLMFIL-SMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYSAGM-LTALSNrIGDVAILISIAwm 161
Cdd:PRK07234 89 ESAKTRFFYAQLLILHgSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLrYLFYSN-VAMLFYLIGAV-- 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 162 LNFGSWNYIyyyDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMln 241
Cdd:PRK07234 166 LVYQANGTF---AFSGLATADPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD-- 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 242 LYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGysklAFFHlLTHALFKALLFMCAGSmIHN 321
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG----GLYA-LAHGLVKSTLFLCAGA-LPS 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 322 LSDTQDIRFMGSIVYFMPLTsvcfnVSSLSLCGLPFLAGFYSKDLILELVcLSWINFLIfflyFFSTGLTAAYSFRLFYY 401
Cdd:PRK07234 315 RNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLKNL-LPWQAIAL----NLAAVGTAASFWKFIFL 384
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916859199 402 SMSGDNnfyssfsfNDKSYYISFgmiFLLIVAVFGGSFLSWLIFPVPYMISlpyylKFLTMFVVLLGGYLGYLV 475
Cdd:PRK07234 385 PFSADD--------EDKKPLPGF---WNAIALLLGGLFLANGVYTEAYTLG-----NILKALLTIGLGWLPYFL 442
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-400 |
3.39e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 100.05 E-value: 3.39e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 52 TLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 131
Cdd:PRK12667 77 VYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYY 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 132 QNVS-SYSAGMLTALSNRIGDVAILISIAWMLN-FGSWN--------YIYYYDFISDSFEMSLITVLIILAAMT-----K 196
Cdd:PRK12667 157 RDRGdAVEAAIKYALIGAVGTTLYFLALAFLYAtFGTLNmadlsakiRGLSFPLTGGLAGNPPLALGVALALALwaftiK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 197 SAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF---------SPMLNLYNFGWFLLIIGCMTMFMAGLGANF 266
Cdd:PRK12667 237 AAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgispSLIDFRAALSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 267 EFDLKKIIALSTLSQLGLMMSILAMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNlSDTQDIRFMGSIVYFMPLTSV 343
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHA-AGTRDIDELAGLGRKMPIASF 394
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1916859199 344 CFNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTgLTAAYSFRLFY 400
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGYFRAWY 450
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
41-317 |
1.07e-19 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 92.41 E-value: 1.07e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 41 LFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMnRFIIIVLMFIL---SMGFLIISPNLISILLGW 117
Cdd:PRK08601 56 LIGANGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSY-RKYFALFTFTTgfaSLAWLSGDLRLMALCWGA 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 118 DGLGLVSYCLVIYYQNVSSYSAGMlTALSNRIGDVAILISIAWM-LNFGSWnyiYYYDFISD-------SFEMSLITVLI 189
Cdd:PRK08601 135 TLLGLTLLIGLNKGWKVAREAAKI-SGMLFLISWLALALAIVWLfIATGEW---QLTSVLSNenlaqlgTWEKTGINLLL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 190 ILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPMLN-------LYNFGWFLLIIGCMTMFMagl 262
Cdd:PRK08601 211 ILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHddiaqilLLIFASISVLIGTGISLV--- 286
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1916859199 263 ganfEFDLKKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGS 317
Cdd:PRK08601 287 ----QVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGS 337
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
110-368 |
5.90e-19 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 90.34 E-value: 5.90e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 110 LISILLGWDGLGLVSYCLVIYYQNVSSYSAGMLTALSNRIGDVAILISIAW-MLNFGSWnyiyyyDFISDSFEMSLITVL 188
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSF------AFGAIAGLGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 189 IILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmlnlynfGWFLLI-IGC-MTMFMAGLgANF 266
Cdd:PRK12668 189 ILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP-------GTELLIyIGAaMAVYGVFF-ALL 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 267 EFDLKKIIALSTLSQLGLMMSILAMGySKL----AFFHLLTHALFKALLFMCAGSMIHNLSdTQDIRFMGSIVYFMPLTS 342
Cdd:PRK12668 261 ENDLRRLLSYHIVSQVGYMVAGIGIG-TALaingAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSMPLTA 338
|
250 260
....*....|....*....|....*.
gi 1916859199 343 VCFNVSSLSLCGLPFLAGFYSKDLIL 368
Cdd:PRK12668 339 LFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
188-398 |
9.20e-19 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 89.44 E-value: 9.20e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 188 LIILAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIR----FSPMLNLYNFGWFLLIIGCMTMFMAGL 262
Cdd:PRK08377 211 LLIFGLAVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARilylMQNANGWSSVLKLVIIMATLTVFFAEL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 263 GANFEFDLKKIIALSTLSQLGLMMSILAMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMGsIVYFMP 339
Cdd:PRK08377 290 SALRQKNVKRMIAYSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEG-LGKRMP 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1916859199 340 LTSVCFNVSSLSLCGLPFLAGFYSKDLILeLVCLSWINFLIFFLYFFSTGLTAAYSFRL 398
Cdd:PRK08377 369 LTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
184-399 |
3.19e-17 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 84.75 E-value: 3.19e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 184 LITVLIILAAMTKSAQIPFSSWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFS-PMLNL--YNFGWFLLIIGCMTMFM 259
Cdd:COG1008 210 LLFLAFFIAFAVKVPMFPFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFAlPLFPEasAYFAPLLAALGVIGIIY 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 260 AGLGANFEFDLKKIIALSTLSQLGLM-MSILAMGYSKL--AFFHLLTHALFKALLFMCAGsMIHNLSDTQDIRFMGSIVY 336
Cdd:COG1008 289 GALVALAQTDLKRLIAYSSVSHMGFVlLGIFALNPLGLqgAVLQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAK 367
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1916859199 337 FMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIleLVCLSWINFLIFFLYFFSTGLTAAYSFRLF 399
Cdd:COG1008 368 RMPVLAALFLLAALASLGLPGTSGFVGEFLV--LLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
23-400 |
5.30e-17 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 84.28 E-value: 5.30e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 23 ILGIYYLLFDYSVFV-EWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMnrFIIIVLMFILSM 101
Cdd:PRK08668 34 LPLLFLIKLYFTLKVgTGEKLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAY--FNMFALMSLAGV 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 102 GFLIISPNLISILLGWDGLGLVSYcLVIYYQNVSSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYDFISD-- 178
Cdd:PRK08668 112 LGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQGLINdt 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 179 SFEMSLITVLIILAA-MTKSAQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRFS---PMLNLYN--------- 244
Cdd:PRK08668 191 STGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLyvlPGTKLFSefgtyrgvp 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 245 -FGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYS---KLAFFHLLTHALFKALLFMCAGSMIH 320
Cdd:PRK08668 270 lFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIY 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 321 NlSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVcLSWINFLIFFLYFFSTGLTAAYSFRLFY 400
Cdd:PRK08668 350 R-TGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL-ISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-361 |
7.43e-14 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 74.48 E-value: 7.43e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 200 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLNLYNFGW--FLLIIGCMTMFMAGLGANFEFDLKKIIAL 276
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLGGNAPLWWgvALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 277 STLSQLGLMMSILAMGYSKLA--------------FFHLLTHALFKALLFMCAGSMIHNlSDTQDIRFMGSIVYFMPLTS 342
Cdd:PRK08042 276 HTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*....
gi 1916859199 343 VCFNVSSLSLCGLPFLAGF 361
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGF 373
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
182-410 |
1.21e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 73.44 E-value: 1.21e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 182 MSLITVLIILAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLNLYNFGW---FLLIIGCMTM 257
Cdd:PRK07691 208 ITVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFthyLILILALLTI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 258 FMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKL---AFFHLLTHALFKALLFMCAGSMIHnLSDTQDIRFMGSI 334
Cdd:PRK07691 287 IFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGL 365
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859199 335 VYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILElVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFY 410
Cdd:PRK07691 366 IKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKGFWGEPKGY 440
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
52-364 |
2.08e-13 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 72.46 E-value: 2.08e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 52 TLILDWMSLIFMSFVMYISSLVIYYSEDYMSGEsNMNR--FIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV- 128
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLERR-GLLRgeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVa 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 129 IYYQNVSSYSAGM----LTALSNRIgdvaILISIAWMLNF-GSWNYIYYYDFISDSFEMSLI----TVLIILAAMTKSAQ 199
Cdd:COG1007 144 FRRDDRRSSEAALkyflLGALSSGF----LLYGISLLYGAtGSLNLAGIAAALAAGGANSPLlllgLVLVLAGLAFKLSA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 200 IPFSSWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIR-FSPMLNLYNFGWFLL--IIGCMTMFMAGLGANFEFDLKKII 274
Cdd:COG1007 220 VPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRlLVEAFPGLAADWQLLlaVLAVLSMTVGNLAALAQTNVKRML 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 275 ALSTLSQLGLMMSILAMGYS---KLAFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLS 351
Cdd:COG1007 298 AYSSIAHAGYLLLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLS 377
|
330
....*....|...
gi 1916859199 352 LCGLPFLAGFYSK 364
Cdd:COG1007 378 LAGIPPTAGFFGK 390
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
139-434 |
5.13e-13 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 71.51 E-value: 5.13e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 139 AGMLTALSNRIGDVAILISIAWM--LNFGSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMA-APTP 215
Cdd:TIGR01972 157 AAMKFFLYTLAGSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeAPTA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 216 VSALVhSSTLVTAGVYLLIRFS----PMLNLYnFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGL-MMSILA 290
Cdd:TIGR01972 237 GSVIL-AGVLLKMGTYGFLRFNlplfPDASLY-FAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLGIFS 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 291 MGYSKL--AFFHLLTHALFKALLFMCAGsMIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIl 368
Cdd:TIGR01972 315 FNELGIsgAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLI- 392
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1916859199 369 eLVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSG--DNNFYSSFSFNDKSYYISFGMIFLLIVAV 434
Cdd:TIGR01972 393 -LLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGelSNPEVAEFPDLNGREIAVLAPLVVLILFL 459
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
145-406 |
5.74e-13 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 71.39 E-value: 5.74e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 145 LSNRIGDVAILISIAWM-----LNFGSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMA-APTPVSA 218
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLvvvyyNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVqAPTAGSV 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 219 LvHSSTLVTAGVYLLIRFS-PMLNLY--NFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG-LMMSILAMGYS 294
Cdd:PRK05846 248 L-LAGILLKMGAYGLLRFSlPLFPDAshEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGfVTLGIFAGNQL 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 295 KL--AFFHLLTHALFKALLFMCAGSMIHNLSdTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIleLVC 372
Cdd:PRK05846 327 GIqgAIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLI--LLG 403
|
250 260 270
....*....|....*....|....*....|....
gi 1916859199 373 LSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGD 406
Cdd:PRK05846 404 SFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGP 437
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
182-368 |
4.61e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 68.42 E-value: 4.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 182 MSLITVLIILAAMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSpMLNLYNFGW-----FLLIIGCM 255
Cdd:PRK06458 213 MKLAFVFLLIGFGTKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYY-ILIDAAIGSdfpgrLLLIFGLL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 256 TMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGySKLAFF----HLLTHALFKALLFMCAGSMIHNlSDTQDIRFM 331
Cdd:PRK06458 291 SVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIG-GPLGIFaallHMLNHSLTKSAIFFASGNVLQK-YGTRDINVI 368
|
170 180 190
....*....|....*....|....*....|....*..
gi 1916859199 332 GSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIL 368
Cdd:PRK06458 369 RGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
183-369 |
4.90e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 68.46 E-value: 4.90e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 183 SLITVLIILAAMTKSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPMLNLYNFGW-FLLIIGCMTMFMA 260
Cdd:PRK12665 209 TALFAVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDtLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 261 GLGANFEFDLKKIIALSTLSQLGLMMSILAM----GYSKlAFFHLLTHALFKALLFMCAGsMIHNLSDTQDIRFMGSIVY 336
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALstvaGLSG-AIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAK 365
|
170 180 190
....*....|....*....|....*....|...
gi 1916859199 337 FMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILE 369
Cdd:PRK12665 366 ASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
178-368 |
5.46e-12 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 68.05 E-value: 5.46e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 178 DSFEMSLITVLIILAAMTKSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFG---WFLLIIGC 254
Cdd:PRK12663 202 DTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQEREllhPLLATMAA 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 255 MTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKL---AFFHLLTHALFKALLFMCAGSMIHnLSDTQDIRFM 331
Cdd:PRK12663 281 ITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYL 359
|
170 180 190
....*....|....*....|....*....|....*..
gi 1916859199 332 GSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIL 368
Cdd:PRK12663 360 GGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
187-400 |
1.71e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 63.62 E-value: 1.71e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 187 VLIILAAMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLN----LYNFGWFLLIIGCMTMFMAG 261
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgaAEQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 262 LGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKLAF---FHLLTHALFKALLFMCAGsMIHNLSDTQDIRFMGSIVYFM 338
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQ 367
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916859199 339 PLTSVCFNVSSLSLCGLPFLAGFYSKDLIL-ELVCLS-WINFLIFFLYFFstgltAAYSFRLFY 400
Cdd:PRK08676 368 PVAAWGVILGSAAIIGMPPFPLFLSKFFILlQLGGISvWLVLAVLLLLLL-----AASSFAIFL 426
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
52-364 |
9.78e-09 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 57.91 E-value: 9.78e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 52 TLILDWMSLIFMSFVMYISSLVIYYSEDYMSgESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY- 130
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 131 YQNVSSYSAGM----LTALSNRIgdvaILISIAWMLNF-GSWNYIYYYDFISDSFEMSLI----TVLIILAAMTKSAQIP 201
Cdd:PRK05777 147 RDRRRSLEAAIkyfvLGALASGF----LLYGMSLLYGAtGSLSFAGIAKALADGSGNSLLllfgLVFLLVGLAFKLSAVP 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 202 FSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPMLNLYNFGW---FLLIIGCMTMFMAGLGANFEFDLKKIIALS 277
Cdd:PRK05777 223 FHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAFGGLSEDwqqVLAIIAIASMLVGNLAALSQTNIKRLLAYS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 278 TLSQLG-LMMSILAMGYSKL--AFFHLLTHALFKALLFMCAGSMIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCG 354
Cdd:PRK05777 302 SIAHAGyLLVGLAAGTAEGYsaVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAG 381
|
330
....*....|
gi 1916859199 355 LPFLAGFYSK 364
Cdd:PRK05777 382 IPPTAGFWGK 391
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
186-371 |
9.37e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 54.06 E-value: 9.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 186 TVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYnfgwFLLIIGCMTMFMAGLGAN 265
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT----LLLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 266 FEFDLKKIIALSTLSQLGLMMSILAMGySKLAFFHLLTHALFKALLFMcagsmIHNLSDTQDIRFMGSIVYFMPLTSVCF 345
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPTLNTTL 244
|
170 180
....*....|....*....|....*..
gi 1916859199 346 NVSSLSLCGLPFLAGFYSKDLIL-ELV 371
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILqELT 271
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
26-431 |
1.90e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 53.80 E-value: 1.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 26 IYYLLFDYSVFVEWELFNLNGSMVVMtLILDWMSLIFMSFVMYISSLVIYYSEDYMSGE-SNMNRFIIIVLMFILSMGFL 104
Cdd:TIGR01770 40 IVLLSALVSLFLTLQYAAYLFTGFSF-FIVDNFALLIKLILLLSTLLTFFFALSYLSKEkINKFEFYILLLFALLGIFLL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 105 IISPNLISILLGWDGLGLVSYCLVIY-YQNVSSYSAGMLTALSNRIGDVAILISIAWMLNF-GSWNYIYYYDFISDSFE- 181
Cdd:TIGR01770 119 VSSNDLLSIYLGLELQSLCFYVLAGLkRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFtGSLNFEDLLLFLSNGMLn 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 182 ---MSLITVLIILAAMTKSAQIPFSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPML---NLYNFGWFLLIIGC 254
Cdd:TIGR01770 199 islLLLGIVLILVGLLFKLSAVPFHMWVPDVYeGAPTPVTAFFSIVPKI-AIFAVFLRLFLYIlfgFSEAWQIFLAIIAF 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 255 MTMFMAGLGANFEFDLKKIIALSTLSQLG-LMMSILAMGYS--KLAFFHLLTHALFKALLFMCAGSM-IHNLSDTQDIRF 330
Cdd:TIGR01770 278 LSMLIGNFGALAQKKVKRLLAYSSISHVGyILIGLLAGTLEgiKAVLFYIFIYALMSLGAFGVLSLLrSYKDEWIEYISD 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 331 MGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILElVCLSWINFLIFFLYFFSTGLTAAYSFRL---FYYSMSGDN 407
Cdd:TIGR01770 358 FAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFF-ALLKSGLYWLAVIAVLTSVIGAFYYLRVvkvMYFDKPERR 436
|
410 420
....*....|....*....|....*.
gi 1916859199 408 NFYSSFSFNDKS--YYISFGMIFLLI 431
Cdd:TIGR01770 437 IPSNPQSKAQSLllSISALFILFLGL 462
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
196-363 |
4.76e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 52.34 E-value: 4.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 196 KSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFS----PMLNLYnFGWFLLIIGCMTMFMAGLGANFEFDL 270
Cdd:PRK12561 198 KLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNvqmlPDAHVY-FAPALAILGVVNIIYGALNAFAQDNV 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 271 KKIIALSTLSQLGLMM----SILAMGYSKlAFFHLLTHALFKALLFMCAGSMiHNLSDTQDIRFMGSIVYFMPLTSVCFN 346
Cdd:PRK12561 276 KRRLAYSSVSHMGFVLlgiaAFTDLGISG-AMLQMISHGLIAAALFFLTGVT-YERTHTLSIPNMGGLAKVMPKTFALFT 353
|
170
....*....|....*..
gi 1916859199 347 VSSLSLCGLPFLAGFYS 363
Cdd:PRK12561 354 ASSMASLALPGMSGFVS 370
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
56-364 |
6.90e-07 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 51.93 E-value: 6.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 56 DWMSLIFMSFVMYISSLVIYYSEDYM-SGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY-QN 133
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIeCTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 134 VSSYSAGMLTALSNRIGDVAILISIAWM-------LNFGSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWL 206
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWLyglsggeIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWT 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 207 PAAM-AAPTPVSALVhSSTLVTAGVYLLIR-----FSPMLNLYNFgwFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLS 280
Cdd:CHL00049 238 PDVYeGSPTPVVAFL-SVTSKVAASALATRifdipFYFSSNEWHL--LLEILAILSMILGNLIAITQTSMKRMLAYSSIG 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 281 QLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSMIHNLS---DTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPF 357
Cdd:CHL00049 315 QIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGlrtGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPP 394
|
....*..
gi 1916859199 358 LAGFYSK 364
Cdd:CHL00049 395 LAGFFGK 401
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
156-402 |
1.22e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 50.74 E-value: 1.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 156 ISIAWMLNFGSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 235
Cdd:MTH00200 65 TASALLLFGGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQ 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 236 FSPMLNlynfGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGySKLAFFHLLTHALFKALLFmca 315
Cdd:MTH00200 145 LAPALN----SNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLYLLLYVIITLTVF--- 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 316 gsMIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILelvclswINFLIFFLYFFSTGLTAAYS 395
Cdd:MTH00200 217 --LLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-------QELSKQGLFIYATILLLGSL 287
|
....*..
gi 1916859199 396 FRLFYYS 402
Cdd:MTH00200 288 LSLFFYL 294
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
187-368 |
1.28e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 51.00 E-value: 1.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 187 VLIILAAMTKSAQIPFSSWLPAA-MAAPTPVSALVHSSTLVtaGVYLLIRFSPML------NLYNFGWFLLIIGCM-TMF 258
Cdd:PRK12666 214 ALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLSTLLfgpeagASAGFGQDWLLPGGLaTLA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 259 MAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKL---AFFHLLTHALFKALLFMCAGSM----------------I 319
Cdd:PRK12666 292 FGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLLADLVerqrgaaadrlavtpeL 371
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1916859199 320 HNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLIL 368
Cdd:PRK12666 372 YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALL 420
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-364 |
1.58e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 50.89 E-value: 1.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 186 TVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYNFGWFLLIIGCMTMFMAGLG-- 263
Cdd:PRK12662 212 VLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNNVFMILAALAiv 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 264 -----ANFEFDLKKIIALSTLSQLGLMmsILAMG---YSKL--AFFHLLTHALFKALLFMCAGSMIHNLsDTQDIRFMGS 333
Cdd:PRK12662 292 fgsvlAILSKDIKRIFAYSSISHIGYI--ILAVSlntYYGLaaAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLN 368
|
170 180 190
....*....|....*....|....*....|.
gi 1916859199 334 IVYFMPLTSVCFNVSSLSLCGLPFLAGFYSK 364
Cdd:PRK12662 369 LWKSMPKITLAFVLLSLSLIGMPPTSGFVAK 399
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
62-369 |
2.52e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 50.17 E-value: 2.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 62 FMSFVMYISSLVIYYSEDYMSGESNMNRFIIIVLMF-ILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNvSSYSAG 140
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYSIEYDHYGKWLSSLYILtILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK-NKRPAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 141 MLTALSNrigdvailISIAWMLNFGSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPF--SSWLPAAMAAPTPVSA 218
Cdd:PRK06459 124 VFMAFGE--------LSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGNAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 219 LVHSSTLVTAGVYLLIR---FSPMLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAM---- 291
Cdd:PRK06459 196 AILSATMTLMGVYGILKmtiLTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymvt 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 292 --GYSKLAFFHLLT-------HALFKALLFMCAGSMihnlsDTQDIRFMGSIVYFMplTSVCFNVSSLSLCGLPFLAGFY 362
Cdd:PRK06459 276 kqLITSIEHFSLITvilysfaHSVAKTGLFLSSGLQ-----EKQSITYSKKIRNRW--IELGLTLLASSLSGLLPNIGGV 348
|
....*..
gi 1916859199 363 SKDLILE 369
Cdd:PRK06459 349 ASWLLLE 355
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
179-369 |
1.82e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 47.22 E-value: 1.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 179 SFEMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYnfgwFLLIIGCMTMF 258
Cdd:MTH00070 88 NMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN----LLIIMGLLSTL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 259 MAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGySKLAFFHLLTHALFKALLFMcagsMIHNLSDTQDIRFMGSIVYFM 338
Cdd:MTH00070 164 IGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNLLIYLIMTSSMFL----MLMNLNSTNINKLSSSWSKNP 238
|
170 180 190
....*....|....*....|....*....|.
gi 1916859199 339 PLTSVCFnVSSLSLCGLPFLAGFYSKDLILE 369
Cdd:MTH00070 239 TLTSMMM-LTLLSLGGLPPTTGFIPKWLILQ 268
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
188-445 |
2.76e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 47.03 E-value: 2.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 188 LIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSstLVTAGVYLLIrfspMLNLYNFGWFLLIIGCMTMFMAGLGANFE 267
Cdd:PRK12664 149 LFMLGLLINCACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILLFLGIITAIYGIIFASLE 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 268 FDLKKIIALSTLSQLGLMMSILAMGYSK-----LAFFHLLTHALFKALLFMCAGSMIhNLSDTQDIRFMGSIvYFMPLTS 342
Cdd:PRK12664 223 QNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVI-NRTRKFNLNRVGGL-FKMSLEA 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 343 VCFNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYF--FSTGLTAAYSFRLFYY---SMSGDNNFYSSFSFND 417
Cdd:PRK12664 301 MCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFliCSLLLFASVGLKFFWYafiSKSKSKPEAEKVYIGS 380
|
250 260
....*....|....*....|....*...
gi 1916859199 418 KsyyisFGMIFLLIVAVFGGSFLSWLIF 445
Cdd:PRK12664 381 K-----LSMIILVLICVVLGMFNSYLLF 403
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
184-394 |
2.79e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 47.01 E-value: 2.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 184 LITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSpmLNLYNFGWFLL-----IIGCMTMF 258
Cdd:PRK07363 206 ILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVapglaIIGTISVI 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 259 MAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKL---AFFHLLTHALFKALLFMCAGsMIHNLSDTQDIRFMGSI- 334
Cdd:PRK07363 284 YGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLm 362
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1916859199 335 --VYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILElvcLSWINFLI-FFLYFFSTGLTAAY 394
Cdd:PRK07363 363 npIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ---GSFSTFPIpTLLCIVASGLTAVY 422
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
184-394 |
3.43e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 46.62 E-value: 3.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 184 LITVLIILAAMTKSAQIPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSpmLNLYNFGW-----FLLIIGCMTM 257
Cdd:PRK06473 206 LLLAPILVGFGIKIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFG--VGLFPEAWvylapWLATWAVVSV 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 258 FMAGLGANFEFDLKKIIALSTLSQLG--LMMSILAMGYSKL-AFFHLLTHALFKALLFMCAGsMIHNLSDTQDIRFMGSI 334
Cdd:PRK06473 283 LYGASCAIAQKDMKKMVAYSSIGHMGyiLLAAAAATPLSILaAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGL 361
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1916859199 335 V---YFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILElvclswINFLIF----FLYFFSTGLTAAY 394
Cdd:PRK06473 362 LnpeRGLPITGSLMILGVMASAGIPGMVGFIAEFLVFR------GSFPIFpvqtLLCMIGTGLTAVY 422
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
51-369 |
5.31e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 45.79 E-value: 5.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 51 MTLILDWMSLIFMSFVMYISSLVIYyseDYMSGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 130
Cdd:PRK06277 66 ITYLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIA 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 131 YQNVSSYSAGMLTALSNRIGDVAILISIAWMLNF-GSWNY--IYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLP 207
Cdd:PRK06277 143 SGTEEAYKAALKYMILGNVAGSILLLGIGFLLAStGTLNItdIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTIK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 208 AAMAAPTP--VSALVHSS---TLVTAGVYLLIRFSPMLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQL 282
Cdd:PRK06277 223 SDIYAKAKpfGSALLQTFskfVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQG 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 283 GLMMSILAMG--YSKLA-FFHLLTHALFKALLFMCAGSmIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLA 359
Cdd:PRK06277 303 GYVAAGLALGtpLGIVAgIFHAINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFN 381
|
330
....*....|
gi 1916859199 360 GFYSKDLILE 369
Cdd:PRK06277 382 GFQSKLMLAQ 391
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
189-429 |
1.12e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 44.91 E-value: 1.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 189 IILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS-PMLNL--YNFGWFLLIIGCMTMFMAGLGAN 265
Cdd:MTH00226 236 IFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSwPILPLgaQNLAPAVIAMGIVGIVYGSFATC 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 266 FEFDLKKIIALSTLSQLGLmMSILAMGYSKL----AFFHLLTHALFKALLFMCAgSMIHNLSDTQDIRFMGSIVYFMPLT 341
Cdd:MTH00226 316 RQIDVKRLVAYSSVAHMGL-VSITLVTHDIIgltgSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIW 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 342 SVCFNVSSLSLCGLPFLAGFYSKDLILeLVCLSWiNFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFS--FNDKS 419
Cdd:MTH00226 394 GTIMIVTSLANVAVPPSGNFIGEYLSI-LSSFNW-NPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFArdVNRRE 471
|
250
....*....|
gi 1916859199 420 YYISFGMIFL 429
Cdd:MTH00226 472 FYITASMVFF 481
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
196-447 |
1.89e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 44.28 E-value: 1.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 196 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS-PMLNLYNFGWFLLII--GCMTMFMAGLGANFEFDLKK 272
Cdd:MTH00204 222 KIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSwPLFPAASEYFAPLIVmlSVIAVIYGSLTTCRQVDFKR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 273 IIALSTLSQLGLM-MSILAMGYSKL--AFFHLLTHALFKALLFMcAGSMIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSS 349
Cdd:MTH00204 302 LIAYSSVAHMGLVpLGLFTHTIEGLvaAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLS 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 350 LSLCGLPFLAGFYSKdlILELVCLSWINFLIFFLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFSfNDKSYYISFGMIFL 429
Cdd:MTH00204 381 LANMGFPLSCNFVGE--FFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFS-RDLNRRELLAILPL 457
|
250
....*....|....*...
gi 1916859199 430 LIVAVFGGSFLSWLIFPV 447
Cdd:MTH00204 458 IIAIFLLGIVPFIIIDLV 475
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
239-445 |
3.94e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 42.89 E-value: 3.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 239 MLNLYNFGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYSKLAFFHLLTHALFKALLFMCAGSM 318
Cdd:MTH00160 136 LLSYLINNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFN 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 319 IHNLSDTQDIRFMGSIVYFMpltsvcFNVSSLSLCGLPFLAGFYSKDLILELVCLSWINFLIFFLYFFSTgLTAAYSFRL 398
Cdd:MTH00160 216 IFFLNQLFNSNNKSKKIKFL------LFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSL-ITLYFYLRI 288
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1916859199 399 FYYSMSGdNNFYSSFSFNDKSYYISFGMIFLLIVAVFGGSFLSWLIF 445
Cdd:MTH00160 289 SYSSLML-NYNKNKWNLKKKKNKFSLILNFLSFISLFGLILSSLLFL 334
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
149-432 |
4.39e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 43.12 E-value: 4.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 149 IGDVAILISIAWMLNF-GSWNYIYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVT 227
Cdd:MTH00217 171 IGSVFMLLGIFTLYSYaGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLK 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 228 AGVYLLIRFS-PMLNLYN--FGWFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM-MSILAMGYSKL--AFFHL 301
Cdd:MTH00217 251 LGGYGFIRFSwPLLPEASeyFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVtLGIFSHTIQGLvaAIFLM 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 302 LTHALFKALLFMcAGSMIHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKdlILELVCLSWINFLIF 381
Cdd:MTH00217 331 LAHGLVSSALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGE--FLSLLAAFEYSYIVG 407
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1916859199 382 FLYFFSTGLTAAYSFRLFYYSMSGDNNFYSSFS--FNDKSYYISFGMIFLLIV 432
Cdd:MTH00217 408 VLASLGMVLSAGYSIYLYNRVCFGAPSKYLYFSrdLNRREFYVLLPLVFLIYL 460
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
56-364 |
7.03e-04 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 42.35 E-value: 7.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 56 DWMSLIFMSFVMYISSLVIYYSEDYM--SGeSNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQN 133
Cdd:PRK02504 77 DNLSIAFRAIIALSTLVTLLMSWRYVeqSG-TPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGYMKR 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 134 VSSYSAGMLTALSNRIGDVAILI---SIAWMLNFGSWNY--IYYYDFISDSFEMSLITVLIILAAMTKSAQIPFSSWLPA 208
Cdd:PRK02504 156 DPRSNEAALKYLLIGAASSAIFLygsSLLYGLSGGSTQLsaIALALITSPSLGLALALVFVIAGIAFKISAVPFHQWTPD 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 209 AM-AAPTPVSALVhSSTLVTAGVYLLIRF-SPMLNLYNFGWFLL--IIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGL 284
Cdd:PRK02504 236 VYeGSPTPVVAFL-SVGSKAAGFALAIRLlVTAFPSFDEQWKLLftALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGF 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 285 MMSILAM----GYSKLAFFHLlthalfkALLFM--CAGSMIHNLS---DTQDIRFMGSIVYFMPLTSVCFNVSSLSLCGL 355
Cdd:PRK02504 315 VMIGLVAgteaGYASMVFYLL-------AYLFMnlGAFACVILFSlrtGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGI 387
|
....*....
gi 1916859199 356 PFLAGFYSK 364
Cdd:PRK02504 388 PPLAGFFGK 396
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
200-363 |
1.19e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 41.62 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 200 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS----PMLNLYnFGWFLLIIGCMTMFMAGLGANFEFDLKKIIA 275
Cdd:PRK02546 230 VPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNagmlPDAHAQ-FAPLLIVLGVVNIIYAALTSFAQRNLKRKIA 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 276 LSTLSQLGLMM----SILAMGYSKlAFFHLLTHALFKALLFMCAGSMiHNLSDTQDIRFMGSIVYFMPLTSVCFNVSSLS 351
Cdd:PRK02546 309 YSSISHMGFVLigigSFTDLGTSG-AMLQMISHGLIGASLFFLVGAT-YDRTHTLMLDEMGGVGQKMRKMFAMWTACSLA 386
|
170
....*....|..
gi 1916859199 352 LCGLPFLAGFYS 363
Cdd:PRK02546 387 SLALPGMSGFVA 398
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
51-90 |
1.96e-03 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 36.25 E-value: 1.96e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 1916859199 51 MTLILDWMSLIFMSFVMYISSLVIYYSEDYMSGESNMNRF 90
Cdd:pfam00662 11 FGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
26-414 |
5.24e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 39.54 E-value: 5.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 26 IYYLLFDYSVFVEWELFNLNGSMVVMTLIL--DWMSLIFMSFVMYISSLVIYYSEDYMSGESnMNRFIIIVLMFILSMGF 103
Cdd:MTH00206 26 TFFSFLIALLFLLWFKWSSEVGWSFSNLYLsyDPLSSPLVILSCWLLPLMFLASQNHMKNEP-INRQRIYITLLIVLQLF 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 104 LII---SPNLISILLGWDGLGLVSYCLVIYYQNVSS-YSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIYYYDFISDS 179
Cdd:MTH00206 105 LILffsSSNLLLFYILFEASLIPTLLLITRWGNQKErLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLT 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 180 FEMSLITVL-IILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLNLYN--FGWFLLIIGCMT 256
Cdd:MTH00206 185 TWNNNLWWLaCILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTklSSYFFIILGLWG 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 257 MFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYS---KLAFFHLLTHALFKALLFmCAGSMIHNLSDTQDIRFMGS 333
Cdd:MTH00206 265 SIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPwgfKGALLLMIAHGLVSSALF-CLANLLYERSHTRTILGNRG 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859199 334 IVYFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILELVcLSWINFLIFFLyFFSTGLTAAYSFRLFYYSMSGDNNFYSSF 413
Cdd:MTH00206 344 LQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSL-FSWSNFTLPLL-GLGFLFTAIYSLYMFVMTQHGKTPNHLLS 421
|
.
gi 1916859199 414 S 414
Cdd:MTH00206 422 L 422
|
|
| |
