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Conserved domains on  [gi|1916858953|gb|QOL00718|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Oxya adentata]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 8.14e-42

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 133.36  E-value: 8.14e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   3 ILFLSMMICFIVPMIVMLLATMLSKKLINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1916858953  83 TSNIYVWFLSTMFFIIVLLGGLYYEWYQGALKW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 8.14e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 133.36  E-value: 8.14e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   3 ILFLSMMICFIVPMIVMLLATMLSKKLINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1916858953  83 TSNIYVWFLSTMFFIIVLLGGLYYEWYQGALKW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 2.49e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 93.64  E-value: 2.49e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953  19 MLLATMLSKKlINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKTSNIYvWFLSTMFFII 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWF-GFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1916858953  99 VLLGGLYYEWYQGALK 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-115 3.28e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 86.33  E-value: 3.28e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   4 LFLSMMICFIVPMIVMLLATMLSKKlINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKT 83
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPK-RPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRE 86

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1916858953  84 SNIYVwFLSTMFFIIVLLGGLYYEWYQGALKW 115
Cdd:COG0838    87 LGWFG-LIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 8.14e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 133.36  E-value: 8.14e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   3 ILFLSMMICFIVPMIVMLLATMLSKKLINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1916858953  83 TSNIYVWFLSTMFFIIVLLGGLYYEWYQGALKW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 1.84e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 130.36  E-value: 1.84e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   1 MSILFLSMMICFIVPMIVMLLATMLSKKLINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1916858953  81 MKTSNIYVWFLSTMFFIIVLLGGLYYEWYQGALKWAK 117
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-117 2.46e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 124.72  E-value: 2.46e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   1 MSILFLSMMICFIVPMIVMLLATMLSKKLINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1916858953  81 MKTSNIYVWFLSTMFFIIVLLGGLYYEWYQGALKWAK 117
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-116 3.66e-33

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 111.87  E-value: 3.66e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   1 MSILFLSMMICFIVPMIVMLLATMLSKKLINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1916858953  81 MKTSNIYVWFLSTMFFIIVLLGGLYYEWYQGALKWA 116
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 4-117 1.36e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 102.71  E-value: 1.36e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   4 LFLSMMICFIVPMIVMLLATMLSKkLINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKT 83
Cdd:MTH00106    3 LMLTLLTNTLLASLLVLIAFWLPQ-LNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQT 81

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1916858953  84 SNIYVWFLSTMFFIIVLLGGLYYEWYQGALKWAK 117
Cdd:MTH00106   82 NNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 6.85e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 100.76  E-value: 6.85e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   1 MSILFLSMMICFIVPMIVMLLATMLSkklinDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00136    5 TTILTITIALSLILAIVSFWLPQMTP-----DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1916858953  81 MKTSNIYVWFLSTMFFIIVLLGGLYYEWYQGALKWA 116
Cdd:MTH00136   80 DQLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWA 115
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-116 1.46e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 99.96  E-value: 1.46e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   1 MSILFLSMMICFIVPMIVMLLATMLSkklinDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00113    4 ISMLTISLALSTILTTLNFWLTQTKP-----DNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 78

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1916858953  81 MKTSNIYVWFLSTMFFIIVLLGGLYYEWYQGALKWA 116
Cdd:MTH00113   79 INLTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 1.41e-27

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 97.74  E-value: 1.41e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   1 MSILFLSMMICFIVPMIVMLLATMLSKKLInDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1916858953  81 MKTSNIYVWFLSTMFFIIVLLGGLYYEWYQGALKWA 116
Cdd:MTH00042   80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWA 115
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 16-116 5.16e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 96.22  E-value: 5.16e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953  16 MIVMLLATMLSKKLIN----------DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMK-TS 84
Cdd:MTH00069    3 MLMLLISTILSLILITisfwlplnnpDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQlNT 82

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1916858953  85 NIYVWFLSTMFFIIVLLgGLYYEWYQGALKWA 116
Cdd:MTH00069   83 PTNTLFWSTLILILLTL-GLIYEWIQGGLEWA 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 2.49e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 93.64  E-value: 2.49e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953  19 MLLATMLSKKlINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKTSNIYvWFLSTMFFII 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWF-GFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1916858953  99 VLLGGLYYEWYQGALK 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-115 1.09e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 92.65  E-value: 1.09e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   1 MSILFLSMMICFIVPMIVMLLAtMLSKKLINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIA-FWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1916858953  81 MKTSniYVWFLSTMFFIIVLLGGLYYEWYQGALKW 115
Cdd:MTH00203   80 NQLS--SLSLLLAFLFLILLTLGLIYEWLQGGLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-115 3.28e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 86.33  E-value: 3.28e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   4 LFLSMMICFIVPMIVMLLATMLSKKlINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKT 83
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPK-RPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRE 86

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1916858953  84 SNIYVwFLSTMFFIIVLLGGLYYEWYQGALKW 115
Cdd:COG0838    87 LGWFG-LIEMLVFIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 8-116 1.97e-21

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 82.22  E-value: 1.97e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   8 MMICFIVPMIVMLLATMLSKKLiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKTSNiY 87
Cdd:PRK06602   15 LIVAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIG-W 92

                          90       100
                  ....*....|....*....|....*....
gi 1916858953  88 VWFLSTMFFIIVLLGGLYYEWYQGALKWA 116
Cdd:PRK06602   93 LGFVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 4-115 6.13e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 72.79  E-value: 6.13e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   4 LFLSMMICFIVPMIVMLLATMLSKKlINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKT 83
Cdd:MTH00018    3 LFILLIFSVVLSALFSGASYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQ 81

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1916858953  84 SNIYVWFLSTMFFIIVLLgGLYYEWYQGALKW 115
Cdd:MTH00018   82 IAPFGFWTMVGFLFILTL-GLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 4-115 7.84e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 70.12  E-value: 7.84e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   4 LFLSMMICFIVPMIVMLLATMLSKKlINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKT 83
Cdd:MTH00055    8 IFILLLFSIGLSTVISGASYIVGVK-QPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQ 86

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1916858953  84 SNIYvWFLSTMFFIIVLLGGLYYEWYQGALKW 115
Cdd:MTH00055   87 IGLF-GFWVMYLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 1.93e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 66.88  E-value: 1.93e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953  32 DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKTSNIYVWFLSTMFFIIVLLgGLYYEWYQG 111
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSFWIVYTFLIVLAI-GLAYEWIKG 118


                  ....
gi 1916858953 112 ALKW 115
Cdd:MTH00030  119 GLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 3-115 9.39e-11

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 54.61  E-value: 9.39e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   3 ILFLSMMICFIVPMIVMLLATMLSKKLINDrEKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMK 82
Cdd:CHL00022    9 IFWAFLIISSLIPILAFLISGLLAPISKGP-EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFD 87

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1916858953  83 TSNIYVwFLSTMFFIIVLLGGLYYEWYQGALKW 115
Cdd:CHL00022   88 VLGVSA-FIEALIFVLILIVGLVYAWRKGALEW 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
5-115 5.21e-10

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 52.75  E-value: 5.21e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   5 FLSMMICFIVPMIVMLLATMLSKKLIN---DREKSSPFECGFDPKSSARMpFSLRFFLIAVIFLIFDVEIALILPIVIIM 81
Cdd:PRK08489   14 FVLLVLTFVAFFLTTRLARFISRKLAQkntEKLKLAIYECGPEPVKQPNR-ISSHFYIMALLFILFDVEIVFMFPWAVDF 92

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1916858953  82 KTSNIYVwFLSTMFFIIVLLGGLYYEWYQGALKW 115
Cdd:PRK08489   93 KLLGLFG-LIEMLLFIVLLTIGFIYAWKKGALEW 125
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
3-115 8.71e-09

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 49.74  E-value: 8.71e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   3 ILFLSMMICFIVPMIVMLLATMLSKKLINDrEKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMK 82
Cdd:PRK07756   11 IVLIFLLLGILLPVVALTLGRMLRPNKPSA-AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYD 89

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1916858953  83 TSNIYVwFLSTMFFIIVLLGGLYYEWYQGALKW 115
Cdd:PRK07756   90 KLGLFA-LIEMLIFVVMLLVGLAYAWKKKVLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 32-115 8.86e-06

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 41.58  E-value: 8.86e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953  32 DREKSSPFECGFDPKSSARMP--FSLRFFLIAVIFLIFDVEIALILPIVIIMKTSNIYVwFLSTMFFIIVLLGGLYYEWY 109
Cdd:PRK07928   34 NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVFG-LVEMALFMLTVFVAYAYVWR 112


                  ....*.
gi 1916858953 110 QGALKW 115
Cdd:PRK07928  113 RGGLEW 118
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 1.08e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 41.03  E-value: 1.08e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   1 MSILFLSMMICFIVPMIVMLLATMLSKKLiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1916858953  81 MKTSNIYVWFLstMFFIivlLGGLYYEWYQGALKW 115
Cdd:MTH00092   80 DFSSLISFFML--MIFI---FFGFYMEWWYGKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 2-115 3.37e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 39.88  E-value: 3.37e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953   2 SILFLSMMICFIVPMIVMLLATMLSKKL-INDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIi 80
Cdd:MTH00060    3 VLLFVFFVFFLLFLVIYFFHSGLWNNKIySGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPF- 81

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1916858953  81 mkTSNIYVWFLSTMFFIIVLLGGLYYEWYQGALKW 115
Cdd:MTH00060   82 --QGLLFYNFWYYYFFLLLLFLGFVVELFSGYVRW 114
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 32-117 3.42e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 37.87  E-value: 3.42e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858953  32 DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKTSNIyVWFLSTMFFIIVLLGGLYYEWYQG 111
Cdd:PRK06432   60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGL-IPFIETLIFLAMPLFAVYYAFKMG 138


                  ....*.
gi 1916858953 112 ALKWAK 117
Cdd:PRK06432  139 YMRWLK 144
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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