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Conserved domains on  [gi|1916858893|gb|QOL00659|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Leuconemacris litangensis]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-309 4.45e-152

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 428.03  E-value: 4.45e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   5 LLMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVFN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  85 LMISLIVWMIFPYLTYMCSFSYGF-FFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFILIG 163
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGIlFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 164 SFNMLDFMNHQFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLF 243
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916858893 244 TLIFLGGDFYSYIFYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFFIGFKILL 309
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-309 4.45e-152

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 428.03  E-value: 4.45e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   5 LLMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVFN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  85 LMISLIVWMIFPYLTYMCSFSYGF-FFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFILIG 163
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGIlFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 164 SFNMLDFMNHQFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLF 243
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916858893 244 TLIFLGGDFYSYIFYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFFIGFKILL 309
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
13-301 7.15e-97

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 287.83  E-value: 7.15e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  13 LILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVFNLMISLIVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  93 MIFPYLTYMCSFSYG---FFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFILIGSFNMLD 169
Cdd:pfam00146  83 AVIPFGPGLVLADLNvgiLYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 170 FMNHQFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLFTLIFLG 249
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1916858893 250 G------DFYSYIFYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLF 301
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-310 6.04e-90

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 271.23  E-value: 6.04e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   4 DLLMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  84 NLMISLIVWMIFPYLTYMC--SFSYG-FFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFI 160
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGlLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 161 LIGSFNMLDFMNHQF-YCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFM 239
Cdd:COG1005   167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 240 SMLFTLIFLGG-------DFYSYI-----FYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLnFLLFFIGFKI 307
Cdd:COG1005   247 SALATTLFLGGwlgpfpiLPLGGLpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325


                  ...
gi 1916858893 308 LLI 310
Cdd:COG1005   326 LLF 328
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-309 4.45e-152

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 428.03  E-value: 4.45e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   5 LLMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVFN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  85 LMISLIVWMIFPYLTYMCSFSYGF-FFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFILIG 163
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGIlFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 164 SFNMLDFMNHQFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLF 243
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916858893 244 TLIFLGGDFYSYIFYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFFIGFKILL 309
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 6-307 9.06e-130

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 371.68  E-value: 9.06e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   6 LMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVFNL 85
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  86 MISLIVWMIFPYLTYMCSFSYGF-FFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFILIGS 164
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGIlFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 165 FNMLDFMNHQFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLFT 244
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916858893 245 LIFLGGDFY--SYIFYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFFIGFKI 307
Cdd:MTH00225  241 ILFFGGFFVtiDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 6-305 8.48e-122

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 351.48  E-value: 8.48e-122
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   6 LMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVFNL 85
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  86 MISLIVWMIFPYLTYMCSFSYGF-FFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFILIGS 164
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLlFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 165 FNMLDFMNHQFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLFT 244
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916858893 245 LIFLGGDFYSYI-----FYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFFIGF 305
Cdd:MTH00143  241 VLFFGGSSVLFLlggvvFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-311 4.20e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 312.33  E-value: 4.20e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   5 LLMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVFN 84
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  85 LMISLIVWMIFPYLTYMCSFSYG-FFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFILIG 163
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGiLFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 164 SFNMLDFMNHQFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLF 243
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916858893 244 TLIFLGGDFYSYIFYL-------KLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFFIGFKILLIS 311
Cdd:MTH00071  244 TILFLGSTYNHLQPELstmnlmiKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLG 318
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 5-305 1.04e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 310.69  E-value: 1.04e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   5 LLMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVFN 84
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  85 LMISLIVWMIFPYLTYMCSFSYG-FFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFILIG 163
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGvLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 164 SFNMLDFMNHQFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLF 243
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1916858893 244 TLIFLGGDFYSYIFYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFFIGF 305
Cdd:MTH00218  241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSL 302
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 5-307 2.20e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 310.29  E-value: 2.20e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   5 LLMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVFN 84
Cdd:MTH00111    4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  85 LMISLIVWMIFPYLTYMCSFSYGFFFLCCTS-LGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFILIG 163
Cdd:MTH00111   84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSsMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 164 SFNMLDFMNHQFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLF 243
Cdd:MTH00111  164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1916858893 244 TLIFLG-------GDFYSYIFYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFFIGFKI 307
Cdd:MTH00111  244 TILFLNpstlnlpPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPI 314
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 5-309 2.58e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 309.75  E-value: 2.58e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   5 LLMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVFN 84
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  85 LMISLIVWMIFPYLTYMCSFSYG-FFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFILIG 163
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSvLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 164 SFNMLDFMNHQFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLF 243
Cdd:MTH00195  161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916858893 244 TLIFLGGDfYSYIFYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFFIGFKILL 309
Cdd:MTH00195  241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-312 8.85e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 308.86  E-value: 8.85e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   7 MFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVFNLM 86
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  87 ISLIVWMIFPYLTYMCSFSYGFFF-LCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFILIGSF 165
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFiLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 166 NMLDFMNHQFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLFTL 245
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916858893 246 IFLGG-------DFYSYIFYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFFIGFKILLISF 312
Cdd:MTH00104  241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 3-309 5.86e-102

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 301.89  E-value: 5.86e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   3 YDLLMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPV 82
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  83 FNLMISLIVWMIFPYLTYMCSFSYGFFF-LCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFIL 161
Cdd:MTH00040   81 LFLFLALLLWSLIPVPTPTLNVNLSLLLvLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 162 IGSFNMLDFMNHQFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSM 241
Cdd:MTH00040  161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916858893 242 LFTLIFLGGDFYSYIFY--------LKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFFIGFKILL 309
Cdd:MTH00040  241 LSVILFLGGGSPFNEIFpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-309 5.53e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 299.21  E-value: 5.53e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   1 MLYDLLMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFS 80
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  81 PVFNLMISLIVWMIFPYLTYMCSFSYG-FFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFF 159
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGiLFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 160 ILIGSFNMLDFMNHQFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFM 239
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1916858893 240 SMLFTLIFLGGDFYSYIFYL-------KLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFFIGFKILL 309
Cdd:MTH00134  241 NTLSAILFLGASHIPTLPELttinlmtKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
NADHdh pfam00146
NADH dehydrogenase;
13-301 7.15e-97

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 287.83  E-value: 7.15e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  13 LILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVFNLMISLIVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  93 MIFPYLTYMCSFSYG---FFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFILIGSFNMLD 169
Cdd:pfam00146  83 AVIPFGPGLVLADLNvgiLYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 170 FMNHQFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLFTLIFLG 249
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1916858893 250 G------DFYSYIFYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLF 301
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 8-310 1.04e-93

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 280.51  E-value: 1.04e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   8 FIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVFNLMI 87
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  88 SLIVWMIFP--YLTYMCSFSYgFFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFILIGSF 165
Cdd:MTH00010   85 ALLLWSLYPhkHPSFFLKFSI-LLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTF 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 166 NMLDFMNHQfYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSmLFTL 245
Cdd:MTH00010  164 SFSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMS-LFTS 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 246 IFLGGDFYSYIFY-----LKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFFIGFKILLI 310
Cdd:MTH00010  242 VFFTSFIPSIFISdlmliLKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-310 6.04e-90

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 271.23  E-value: 6.04e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   4 DLLMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  84 NLMISLIVWMIFPYLTYMC--SFSYG-FFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFI 160
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGlLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 161 LIGSFNMLDFMNHQF-YCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFM 239
Cdd:COG1005   167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 240 SMLFTLIFLGG-------DFYSYI-----FYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLnFLLFFIGFKI 307
Cdd:COG1005   247 SALATTLFLGGwlgpfpiLPLGGLpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325


                  ...
gi 1916858893 308 LLI 310
Cdd:COG1005   326 LLF 328
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-301 3.27e-86

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 261.59  E-value: 3.27e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   1 MLYDLLMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFS 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  81 PVFNLMISLIVWMIFPYLTYMCSFSYG---FFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 157
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYERGVLISDFKigiLYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 158 FFILIGSFNMLDFMNHQF-YCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSI 236
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1916858893 237 VFMSMLFTLIFLGG--------DFYSYIFYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLF 301
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIF 313
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 5-308 5.31e-86

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 261.20  E-value: 5.31e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   5 LLMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVFN 84
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  85 LMISLIVWMIFPYLTYMCSFSYG---FFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFIL 161
Cdd:MTH00054   81 LTLAFIAWGVIPYGEGVVLSDLGigiLYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 162 IGSFNMLDFMNHQFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSM 241
Cdd:MTH00054  161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 242 LFTLIFLGGDFYSYI----------FYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLF----FIGFKI 307
Cdd:MTH00054  241 FGVILFLGGWLVISGptsyfsnfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLvsgiLIGFNA 320


                  .
gi 1916858893 308 L 308
Cdd:MTH00054  321 L 321
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-296 2.98e-84

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 256.66  E-value: 2.98e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   5 LLMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVFN 84
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  85 LMISLIVWMIFPYLTY--MCSFSYG-FFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFIL 161
Cdd:PRK06076   89 FIPAFLAWAVIPFGPElvIADLNVGiLYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 162 IGSFNMLDFMNHQFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSM 241
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916858893 242 LFTLIFLGG-----DFYSYI-----FYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 296
Cdd:PRK06076  249 LITTLFLGGwlppfPLGGGIpgaiwFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 2-307 3.69e-69

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 218.73  E-value: 3.69e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   2 LYDLLMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSP 81
Cdd:MTH00029    3 IYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAP 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  82 VFNLMISLIVWMIFPYL--TYMCSFSYG-FFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSF 158
Cdd:MTH00029   83 IISFTLAILAWAIVTMDqgVFLSDLDVGvLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISV 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 159 FILIGSFNMLDFMNHQFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVF 238
Cdd:MTH00029  163 ILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIIL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 239 MSMLFTLIFLGG-----------------------DFYSYIFYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLS 295
Cdd:MTH00029  243 MSCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLS 322

                         330
                  ....*....|..
gi 1916858893 296 LNFLLFFIGFKI 307
Cdd:MTH00029  323 LGLVILTAGILI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-307 7.36e-61

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 195.50  E-value: 7.36e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  11 NFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVFNLMISLI 90
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  91 VWMIFPYLTYMCSFSY-GFFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFILIGSFNmld 169
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYsLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFS--- 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 170 fmnhqFYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLFTLIFLG 249
Cdd:MTH00090  158 -----FVSSFSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK 232

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1916858893 250 gdfysyIFYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFFIGFKI 307
Cdd:MTH00090  233 ------FSFLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 9-303 4.95e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 165.10  E-value: 4.95e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   9 IFNFLILIICVLIS---VAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSPVfnL 85
Cdd:MTH00058    1 IFGLVSGLEGLLIIlllVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVF--L 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  86 MISLIVWMIFPYLTYMCSFSYGF---FFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFILI 162
Cdd:MTH00058   79 LVLLVVFYCFIYGSYYSGSYSSLsllWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCY 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 163 GSFNMLDFMnhqFYCWFMMISFPLSLACFASC-LAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSM 241
Cdd:MTH00058  159 GSYSLVDFY---YSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSW 235

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1916858893 242 LFTLIFLGGDFYSYIFYLKLtimsFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFFI 303
Cdd:MTH00058  236 LGSVLFFGGGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-310 2.63e-40

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 144.32  E-value: 2.63e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   2 LYDLLMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLICKEQPIPIMTNYLLYYFSP 81
Cdd:CHL00032   23 VYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGP 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  82 VFNLMISLIVWMIFP--YLTYMCSFSYG-FFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSF 158
Cdd:CHL00032  103 SIAVISILLSYLVIPfgYHLVLADLSIGvFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 159 FILIGSFNMLDFMNHQ-------FYCWFMMISFplsLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLA 231
Cdd:CHL00032  183 SLLSNSLSTVDIVEAQskygfwgWNLWRQPIGF---IVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVA 259

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 232 EYTSIVFMSMLFTLIFLGGDFYS--YIFYLKL-----------TIMS----------FLFIWV--RGTLPRFRYDKLMYL 286
Cdd:CHL00032  260 SYLNLLVSSLFVTVLYLGGWNLSipYIFIPELfeinktggvfgTTIGifitlaktylFLFISIttRWTLPRLRMDQLLNL 339

                         330       340
                  ....*....|....*....|....
gi 1916858893 287 AWKSFLPLSLNFLLFFIGFKILLI 310
Cdd:CHL00032  340 GWKFLLPISLGNLLLTTSFQLLSL 363
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-303 8.77e-28

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 109.50  E-value: 8.77e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893   6 LMFIFNFLILIICVLISVAFLTLLERKVLGYIQIRKGPnkvgfiGIPQPFSDAIKLICKEQPIPImTNYLLYYFSPVFNL 85
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPE-TASWLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893  86 MISLIVWMIFPYLTYMCSFSY-----GFFFLccTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSFFI 160
Cdd:COG0650    74 AAMLLAALLVPVLTTGPPLSFsgdliVLVYL--LALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALAL 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858893 161 LIGSFNMLDFMNHQ---FYCWFMMISFPLSLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIV 237
Cdd:COG0650   152 LAGSTSLSDIVAYQaahGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLF 231

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1916858893 238 FMSMLFTLIFLGGDFYSY------IFYLKLTIMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFFI 303
Cdd:COG0650   232 VLLSLFVNLFLPWGIALTlllallLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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