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Conserved domains on  [gi|1916858887|gb|QOL00653|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Leuconemacris litangensis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-113 6.34e-37

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 121.04  E-value: 6.34e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   3 ILSTSILISFIVPMMVMLIATILSKKLINDREKSSPFECGFDPK--LDMPFSLRFFLIAVIFLIFDVEIALILPIVMIMK 80
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKssARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1916858887  81 TSNIAMWTMSTTFFILVLLSGLYYEWNQGALQW 113
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-113 6.34e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 121.04  E-value: 6.34e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   3 ILSTSILISFIVPMMVMLIATILSKKLINDREKSSPFECGFDPK--LDMPFSLRFFLIAVIFLIFDVEIALILPIVMIMK 80
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKssARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1916858887  81 TSNIAMWTMSTTFFILVLLSGLYYEWNQGALQW 113
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-112 5.15e-23

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 85.17  E-value: 5.15e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887  19 MLIATILSKKlINDREKSSPFECGFDPKLD--MPFSLRFFLIAVIFLIFDVEIALILPIVMIMK-TSNIAMWTMstTFFI 95
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDarLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFReLGWFGFVEM--LIFI 77

                          90
                  ....*....|....*..
gi 1916858887  96 LVLLSGLYYEWNQGALQ 112
Cdd:pfam00507  78 AILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-113 2.56e-20

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 79.01  E-value: 2.56e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   8 ILISFIVPMMVMLIATILSKKlINDREKSSPFECGFDPKLD--MPFSLRFFLIAVIFLIFDVEIALILPIVMIMKTSNI- 84
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPK-RPNPEKLSPYECGIEPVGDarIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWf 90

                          90       100
                  ....*....|....*....|....*....
gi 1916858887  85 AMWTMstTFFILVLLSGLYYEWNQGALQW 113
Cdd:COG0838    91 GLIEM--LVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-113 6.34e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 121.04  E-value: 6.34e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   3 ILSTSILISFIVPMMVMLIATILSKKLINDREKSSPFECGFDPK--LDMPFSLRFFLIAVIFLIFDVEIALILPIVMIMK 80
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKssARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1916858887  81 TSNIAMWTMSTTFFILVLLSGLYYEWNQGALQW 113
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-114 2.70e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 114.57  E-value: 2.70e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   1 MMILSTSILISFIVPMMVMLIATILSKKLINDREKSSPFECGFDP--KLDMPFSLRFFLIAVIFLIFDVEIALILPIVMI 78
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPisSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1916858887  79 MKTSNIAMWTMSTTFFILVLLSGLYYEWNQGALQWA 114
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-114 5.38e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 108.93  E-value: 5.38e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   1 MMILSTSILISFIVPMMVMLIATILSKKLINDREKSSPFECGFDPKLD--MPFSLRFFLIAVIFLIFDVEIALILPIVMI 78
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESarLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1916858887  79 MKTSNIAMWTMSTTFFILVLLSGLYYEWNQGALQWA 114
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-114 1.92e-28

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 99.93  E-value: 1.92e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   1 MMILSTSILISFIVPMMVMLIATILSKKLINDREKSSPFECGFDPK--LDMPFSLRFFLIAVIFLIFDVEIALILPIVMI 78
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHktARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1916858887  79 MKTSNIAMWTMSTTFFILVLLSGLYYEWNQGALQWA 114
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-114 6.28e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 90.71  E-value: 6.28e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   2 MILSTSILISFIVPMMVMLIATILSKKLiNDREKSSPFECGFDPKLDM--PFSLRFFLIAVIFLIFDVEIALILPIVMIM 79
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTK-PDNEKLSPYECGFDPLGSArlPFSIRFFLVAILFLLFDLEIALLLPLPWAI 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1916858887  80 KTSNIAMWTMSTTFFILVLLSGLYYEWNQGALQWA 114
Cdd:MTH00113   80 NLTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 3.31e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 88.89  E-value: 3.31e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   1 MMILSTSILISFIVPMMVMLIATILSKKLInDREKSSPFECGFDP--KLDMPFSLRFFLIAVIFLIFDVEIALILPIVMI 78
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPlnSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1916858887  79 MKTSNIAMWTMSTTFFILVLLSGLYYEWNQGALQWAD 115
Cdd:MTH00042   80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 2-115 4.50e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 88.46  E-value: 4.50e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   2 MILSTSILISFIVPMMVMLIATILSKkLINDREKSSPFECGFDP--KLDMPFSLRFFLIAVIFLIFDVEIALILPIVMIM 79
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQ-LNIYSEKASPYECGFDPmgSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1916858887  80 KTSNIAMWTMSTTFFILVLLSGLYYEWNQGALQWAD 115
Cdd:MTH00106   80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 16-115 4.64e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 88.44  E-value: 4.64e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887  16 MMVMLIATILSKKLI----------NDREKSSPFECGFDP--KLDMPFSLRFFLIAVIFLIFDVEIALILPIVMIMKTSN 83
Cdd:MTH00136    5 TTILTITIALSLILAivsfwlpqmtPDHEKLSPYECGFDPlgSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPS 84

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1916858887  84 IAMwTMSTTFFILVLLS-GLYYEWNQGALQWAD 115
Cdd:MTH00136   85 PLL-TFFWATAVLILLTlGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-112 5.15e-23

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 85.17  E-value: 5.15e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887  19 MLIATILSKKlINDREKSSPFECGFDPKLD--MPFSLRFFLIAVIFLIFDVEIALILPIVMIMK-TSNIAMWTMstTFFI 95
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDarLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFReLGWFGFVEM--LIFI 77

                          90
                  ....*....|....*..
gi 1916858887  96 LVLLSGLYYEWNQGALQ 112
Cdd:pfam00507  78 AILLVGLVYAWKKGALE 94
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 16-115 6.63e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 85.43  E-value: 6.63e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887  16 MMVMLIATILSKKLIN----------DREKSSPFECGFDP--KLDMPFSLRFFLIAVIFLIFDVEIALILPIVMIMKTsN 83
Cdd:MTH00069    3 MLMLLISTILSLILITisfwlplnnpDSEKLSPYECGFDPlgSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL-N 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1916858887  84 IAMWTMSTTFFILVLLS-GLYYEWNQGALQWAD 115
Cdd:MTH00069   82 TPTNTLFWSTLILILLTlGLIYEWIQGGLEWAE 114
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-113 2.56e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 83.79  E-value: 2.56e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   1 MMILSTSILISFIVPMMVMLIAtILSKKLINDREKSSPFECGFDP--KLDMPFSLRFFLIAVIFLIFDVEIALILPIVMI 78
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIA-FWLPKVNPDGEKLSPYECGFDPlgSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1916858887  79 MKTSNiaMWTMSTTFFILVLLSGLYYEWNQGALQW 113
Cdd:MTH00203   80 NQLSS--LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 8-114 2.18e-21

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 81.83  E-value: 2.18e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   8 ILISFIVPMMVMLIATILSKKLiNDREKSSPFECGFDPKLD--MPFSLRFFLIAVIFLIFDVEIALILP-IVMIMKTSNI 84
Cdd:PRK06602   15 LIVAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDarMKFDVRFYLVAILFVIFDLEAAFLFPwAVSFREIGWL 93

                          90       100       110
                  ....*....|....*....|....*....|
gi 1916858887  85 AMWTMstTFFILVLLSGLYYEWNQGALQWA 114
Cdd:PRK06602   94 GFVEA--MIFILVLLVGLVYLWRKGALDWE 121
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-113 2.56e-20

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 79.01  E-value: 2.56e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   8 ILISFIVPMMVMLIATILSKKlINDREKSSPFECGFDPKLD--MPFSLRFFLIAVIFLIFDVEIALILPIVMIMKTSNI- 84
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPK-RPNPEKLSPYECGIEPVGDarIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWf 90

                          90       100
                  ....*....|....*....|....*....
gi 1916858887  85 AMWTMstTFFILVLLSGLYYEWNQGALQW 113
Cdd:COG0838    91 GLIEM--LVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 8-113 7.04e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 72.79  E-value: 7.04e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   8 ILISFIVPMMVMLIATILSKKlINDREKSSPFECGFDP--KLDMPFSLRFFLIAVIFLIFDVEIALILP-IVMIMKTSNI 84
Cdd:MTH00018    7 LIFSVVLSALFSGASYFLGVK-QPDREKVSAYECGFDPfgFPGRPFSIRFFLIGILFLIFDLEISFLFPwCVLYNQIAPF 85

                          90       100
                  ....*....|....*....|....*....
gi 1916858887  85 AMWTMSTTFFILVLlsGLYYEWNQGALQW 113
Cdd:MTH00018   86 GFWTMVGFLFILTL--GLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 8-113 2.73e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 63.58  E-value: 2.73e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   8 ILISFIVPMMVMLIATILSKKlINDREKSSPFECGFDP--KLDMPFSLRFFLIAVIFLIFDVEIALILP-IVMIMKTSNI 84
Cdd:MTH00055   12 LLFSIGLSTVISGASYIVGVK-QPDSEKVSVYECGFDPfeSSRIPFSVRFFLVGILFLIFDLEISFLFPwCVVYNQIGLF 90

                          90       100
                  ....*....|....*....|....*....
gi 1916858887  85 AMWTMstTFFILVLLSGLYYEWNQGALQW 113
Cdd:MTH00055   91 GFWVM--YLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-113 1.68e-13

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 61.87  E-value: 1.68e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887  32 DREKSSPFECGFDP--KLDMPFSLRFFLIAVIFLIFDVEIALILPIVMIMKTSNI-AMWTMSTtfFILVLLSGLYYEWNQ 108
Cdd:MTH00030   40 DSEKSSIYECGFDPfgKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLfSFWIVYT--FLIVLAIGLAYEWIK 117


                  ....*
gi 1916858887 109 GALQW 113
Cdd:MTH00030  118 GGLEW 122
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
9-113 1.87e-09

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 51.21  E-value: 1.87e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   9 LISFIVPMMVMLIATILSKKLIN---DREKSSPFECGFDP-KLDMPFSLRFFLIAVIFLIFDVEIALILPIVMIMKT-SN 83
Cdd:PRK08489   18 VLTFVAFFLTTRLARFISRKLAQkntEKLKLAIYECGPEPvKQPNRISSHFYIMALLFILFDVEIVFMFPWAVDFKLlGL 97

                          90       100       110
                  ....*....|....*....|....*....|
gi 1916858887  84 IAMWTMstTFFILVLLSGLYYEWNQGALQW 113
Cdd:PRK08489   98 FGLIEM--LLFIVLLTIGFIYAWKKGALEW 125
ndhC CHL00022
NADH dehydrogenase subunit 3
 8-113 7.93e-09

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 49.60  E-value: 7.93e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   8 ILISFIVPMMVMLIATILSKKLINDrEKSSPFECGFDPKLD--MPFSLRFFLIAVIFLIFDVEIALILPIVMIMKTSNIA 85
Cdd:CHL00022   14 LIISSLIPILAFLISGLLAPISKGP-EKLSSYESGIEPMGDawLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVS 92

                          90       100
                  ....*....|....*....|....*...
gi 1916858887  86 MWtMSTTFFILVLLSGLYYEWNQGALQW 113
Cdd:CHL00022   93 AF-IEALIFVLILIVGLVYAWRKGALEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
2-113 3.18e-06

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 42.81  E-value: 3.18e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   2 MILSTSILISFIVPMMVMLIATILSKKLINDrEKSSPFECGFDPKLD--MPFSLRFFLIAVIFLIFDVEIALILP-IVMI 78
Cdd:PRK07756   10 MIVLIFLLLGILLPVVALTLGRMLRPNKPSA-AKATTYESGIEPFHDanIRFHARYYIFALLFVIFDVETLFLYPwAVAY 88

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1916858887  79 MKTSNIAMWTMstTFFILVLLSGLYYEWNQGALQW 113
Cdd:PRK07756   89 DKLGLFALIEM--LIFVVMLLVGLAYAWKKKVLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 19-113 5.34e-05

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 39.27  E-value: 5.34e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887  19 MLIATILSKKLINdREKSSPFECGFDPkLDMP-----FSLRFFLIAVIFLIFDVEIALILP-IVMIMKTSNIAMWTMstT 92
Cdd:PRK07928   22 VVVASLVGPKRYN-RAKLEAYECGIEP-TPQPagggrFPVKYYLTAMLFIVFDIEIVFLYPwAVSFDALGVFGLVEM--A 97

                          90       100
                  ....*....|....*....|.
gi 1916858887  93 FFILVLLSGLYYEWNQGALQW 113
Cdd:PRK07928   98 LFMLTVFVAYAYVWRRGGLEW 118
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-113 7.73e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 36.03  E-value: 7.73e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858887   1 MMILSTSILISFIVPMMVMLIATILSKKLiNDREKSSPFECGFDP--KLDMPFSLRFFLIAVIFLIFDVEIALILPIVMI 78
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESvgKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1916858887  79 MKTSNIAMWtmsttFFILVLLSGLYYEWNQGALQW 113
Cdd:MTH00092   80 DFSSLISFF-----MLMIFIFFGFYMEWWYGKLIW 109
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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