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Conserved domains on  [gi|1915410468|gb|QOJ46925|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Megadyptes antipodes]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK06602 super family cl00535
NADH:ubiquinone oxidoreductase subunit A; Validated
 1-116 2.36e-40

NADH:ubiquinone oxidoreductase subunit A; Validated


The actual alignment was detected with superfamily member MTH00136:

Pssm-ID: 469809 [Multi-domain]  Cd Length: 116  Bit Score: 130.04  E-value: 2.36e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   1 MNMITFMFTLSLALSIALTALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1915410468  81 QLQSPTTTLTWTSTIILLLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 2.36e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 130.04  E-value: 2.36e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   1 MNMITFMFTLSLALSIALTALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1915410468  81 QLQSPTTTLTWTSTIILLLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-83 2.11e-17

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 70.92  E-value: 2.11e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1915410468  20 ALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLlpLPWATQLQ 83
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFR 63
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-114 2.48e-15

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 66.30  E-value: 2.48e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   4 ITFMFTLSLALSIALTALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLlpLPWATQLQ 83
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1915410468  84 S-PTTTLTWTSTIILLLTLGLIYEWMQGGLEW 114
Cdd:COG0838    86 ElGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 2.36e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 130.04  E-value: 2.36e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   1 MNMITFMFTLSLALSIALTALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1915410468  81 QLQSPTTTLTWTSTIILLLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 9.38e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 128.46  E-value: 9.38e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   2 NMITFMFTLSLALSIALTALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLLPLPWATQ 81
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1915410468  82 LQSPTTTLTWTSTIILLLTLGLIYEWMQGGLEWA 115
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-116 1.14e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 123.18  E-value: 1.14e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   3 MITFMFTLSLALSIALTALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLLPLPWATQL 82
Cdd:MTH00069    1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1915410468  83 QSPTTTLTWTSTIILLLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00069   81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-116 4.09e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 101.55  E-value: 4.09e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   1 MNMITFMFTLSLaLSIALTALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00106    1 MNLMLTLLTNTL-LASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1915410468  81 QLQSPTTTLTWTSTIILLLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00106   80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 4.27e-28

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 98.90  E-value: 4.27e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   1 MNMITFMFTLSLALSIALTALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1915410468  81 QLQSPTTTLTWTSTIILLLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00042   81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 2.94e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 91.50  E-value: 2.94e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   1 MNMITFMFTLSLALSIALTALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1915410468  81 QLQSPttTLTWTSTIILLLTLGLIYEWMQGGLEW 114
Cdd:MTH00203   81 QLSSL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-83 2.11e-17

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 70.92  E-value: 2.11e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1915410468  20 ALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLlpLPWATQLQ 83
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFR 63
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 6.66e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 67.58  E-value: 6.66e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   1 MNMITFMFTLSLALSIALTALNFWLAQ-TSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKrSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1915410468  80 TQLQSPTTTLTWTSTIILLLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 4-114 8.08e-16

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 67.39  E-value: 8.08e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   4 ITFMFTLSLALSIALTALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLLPLPWATQLQ 83
Cdd:MTH00018    3 LFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQI 82

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1915410468  84 SPtTTLTWTSTIILLLTLGLIYEWMQGGLEW 114
Cdd:MTH00018   83 AP-FGFWTMVGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-114 2.41e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 66.34  E-value: 2.41e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   3 MITFMFTLSLALSIALTALNFWLAQTSP-DSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLLPLPWATQ 81
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSImDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1915410468  82 LQSPTTTLTWTSTIILLLTLGLIYEWMQGGLEW 114
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-114 2.48e-15

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 66.30  E-value: 2.48e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   4 ITFMFTLSLALSIALTALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLlpLPWATQLQ 83
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1915410468  84 S-PTTTLTWTSTIILLLTLGLIYEWMQGGLEW 114
Cdd:COG0838    86 ElGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-115 1.96e-14

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 64.11  E-value: 1.96e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   1 MNMITFMFTLSLALSIALTALNFWLA-QTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAaRSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1915410468  80 TQLQSPTTTLTWTSTIILLLTLGLIYEWMQGGLEWA 115
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 4-114 4.88e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 63.19  E-value: 4.88e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   4 ITFMFTLSLALSIALTALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLlpLPWATQL- 82
Cdd:MTH00055    8 IFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYn 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1915410468  83 QSPTTTLTWTSTIILLLTLGLIYEWMQGGLEW 114
Cdd:MTH00055   86 QIGLFGFWVMYLFLIILTIGLIYEWVKGGLEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 10-115 1.76e-13

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 61.80  E-value: 1.76e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468  10 LSLALSIALTALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLlpLPWATQL-QSPTTT 88
Cdd:PRK06602   17 VAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFrEIGWLG 94

                          90       100
                  ....*....|....*....|....*..
gi 1915410468  89 LTWTSTIILLLTLGLIYEWMQGGLEWA 115
Cdd:PRK06602   95 FVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 12-114 5.61e-13

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 60.33  E-value: 5.61e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468  12 LALSIALTALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLlpLPWATQL-QSPTTTLT 90
Cdd:MTH00030   21 LLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFnQLNLFSFW 98

                          90       100
                  ....*....|....*....|....
gi 1915410468  91 WTSTIILLLTLGLIYEWMQGGLEW 114
Cdd:MTH00030   99 IVYTFLIVLAIGLAYEWIKGGLEW 122
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 7.06e-13

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 60.01  E-value: 7.06e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   1 MNMITFMFTLSLALSIALTALNFWLAQTS-PDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSlMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1915410468  80 TQLQSPTTTLTWTSTIILLLTLGLIYEWMQGGLEWAE 116
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 4-114 3.70e-08

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 47.74  E-value: 3.70e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   4 ITFMFTLSLALSIALTALNFWLAQTSPDSEKLSPYECGFDPLDQL--GSHFQSDSSSVAILFLLFDLEIALLLPlpWATQ 81
Cdd:PRK07928    7 ILVLGALAAAFAVVSVVVASLVGPKRYNRAKLEAYECGIEPTPQPagGGRFPVKYYLTAMLFIVFDIEIVFLYP--WAVS 84

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1915410468  82 LQS-PTTTLTWTSTIILLLTLGLIYEWMQGGLEW 114
Cdd:PRK07928   85 FDAlGVFGLVEMALFMLTVFVAYAYVWRRGGLEW 118
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-74 2.35e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 37.57  E-value: 2.35e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1915410468   1 MNMITFMFTLSLALSIALTALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLL 74
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
ndhC CHL00022
NADH dehydrogenase subunit 3
 5-114 2.14e-03

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 35.35  E-value: 2.14e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   5 TFMFTLSLALSIALTALNF--WLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLLPlpWATQL 82
Cdd:CHL00022    9 IFWAFLIISSLIPILAFLIsgLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYP--WAMSF 86

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1915410468  83 QS-PTTTLTWTSTIILLLTLGLIYEWMQGGLEW 114
Cdd:CHL00022   87 DVlGVSAFIEALIFVLILIVGLVYAWRKGALEW 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
25-114 2.27e-03

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 35.41  E-value: 2.27e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468  25 LAQTSPDSEKLSPYECGFDPLDQ---LGSHFqsdsSSVAILFLLFDLEIALLLPlpWATQLQS-PTTTLTWTSTIILLLT 100
Cdd:PRK08489   38 LAQKNTEKLKLAIYECGPEPVKQpnrISSHF----YIMALLFILFDVEIVFMFP--WAVDFKLlGLFGLIEMLLFIVLLT 111

                          90
                  ....*....|....
gi 1915410468 101 LGLIYEWMQGGLEW 114
Cdd:PRK08489  112 IGFIYAWKKGALEW 125
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
3-114 6.30e-03

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 33.95  E-value: 6.30e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1915410468   3 MITFMF-TLSLALSIALTALNFWLAQTSPDSEKLSPYECGFDPLDQLGSHFQSDSSSVAILFLLFDLEIALLLPlpWATQ 81
Cdd:PRK07756   10 MIVLIFlLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVA 87

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1915410468  82 L-QSPTTTLTWTSTIILLLTLGLIYEWMQGGLEW 114
Cdd:PRK07756   88 YdKLGLFALIEMLIFVVMLLVGLAYAWKKKVLQW 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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