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Conserved domains on  [gi|1907124504|ref|XP_036016504|]
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zinc finger protein 53 isoform X4 [Mus musculus]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 11472214)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940
SCOP:  4003583

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
103-507 2.86e-14

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 75.12  E-value: 2.86e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 103 DTPHQCEKCRKCFSTASSLTVHKRIHTGKKPYKCSV--CGKSFTQCTNLKTHQRLHTGEKPYKC-KECGKSFPQLSALKS 179
Cdd:COG5048    31 PRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNsKSLPLSNSKASSSSL 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 180 HQKIHTGERPYKCKECDKSFAHCSSFRRHQKTHRAEEHCSCPEC-GKVLHQLSHLRSHYRL---HTGEKPYKCNECDRSF 255
Cdd:COG5048   111 SSSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNnSSSVNTPQSNSLHPPLpanSLSKDPSSNLSLLISS 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 256 TYYASYRRHQKTHSLDKFYKCKECGKSFLE---LSHLKRHYRIHTGEKPYKCEvcdksfTVNSTLKTHLKIHTGEKPFKC 332
Cdd:COG5048   191 NVSTSIPSSSENSPLSSSYSIPSSSSDQNLensSSSLPLTTNSQLSPKSLLSQ------SPSSLSSSDSSSSASESPRSS 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 333 ReCDKSFTKCSHLRRHQSVHTG-EKPYRCKECDKSFTECSTLRAHQ--KIHTGE--KPYKCRE--CDKSFIQRSNLIIHQ 405
Cdd:COG5048   265 L-PTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLrsVNHSGEslKPFSCPYslCGKLFSRNDALKRHI 343

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 406 RVHTGERPYICK--ECGKSFTKCST------LQIHQKIHTGEKPYKCM-ECNKSFTQDSHLRTHQRVHTGERP--YICKE 474
Cdd:COG5048   344 LLHTSISPAKEKllNSSSKFSPLLNneppqsLQQYKDLKNDKKSETLSnSCIRNFKRDSNLSLHIITHLSFRPynCKNPP 423

                         410       420       430
                  ....*....|....*....|....*....|...
gi 1907124504 475 CGKSFTRCSYLRAHQKIHTGEKPYKCKDCDISF 507
Cdd:COG5048   424 CSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFR 456
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
103-507 2.86e-14

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 75.12  E-value: 2.86e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 103 DTPHQCEKCRKCFSTASSLTVHKRIHTGKKPYKCSV--CGKSFTQCTNLKTHQRLHTGEKPYKC-KECGKSFPQLSALKS 179
Cdd:COG5048    31 PRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNsKSLPLSNSKASSSSL 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 180 HQKIHTGERPYKCKECDKSFAHCSSFRRHQKTHRAEEHCSCPEC-GKVLHQLSHLRSHYRL---HTGEKPYKCNECDRSF 255
Cdd:COG5048   111 SSSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNnSSSVNTPQSNSLHPPLpanSLSKDPSSNLSLLISS 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 256 TYYASYRRHQKTHSLDKFYKCKECGKSFLE---LSHLKRHYRIHTGEKPYKCEvcdksfTVNSTLKTHLKIHTGEKPFKC 332
Cdd:COG5048   191 NVSTSIPSSSENSPLSSSYSIPSSSSDQNLensSSSLPLTTNSQLSPKSLLSQ------SPSSLSSSDSSSSASESPRSS 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 333 ReCDKSFTKCSHLRRHQSVHTG-EKPYRCKECDKSFTECSTLRAHQ--KIHTGE--KPYKCRE--CDKSFIQRSNLIIHQ 405
Cdd:COG5048   265 L-PTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLrsVNHSGEslKPFSCPYslCGKLFSRNDALKRHI 343

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 406 RVHTGERPYICK--ECGKSFTKCST------LQIHQKIHTGEKPYKCM-ECNKSFTQDSHLRTHQRVHTGERP--YICKE 474
Cdd:COG5048   344 LLHTSISPAKEKllNSSSKFSPLLNneppqsLQQYKDLKNDKKSETLSnSCIRNFKRDSNLSLHIITHLSFRPynCKNPP 423

                         410       420       430
                  ....*....|....*....|....*....|...
gi 1907124504 475 CGKSFTRCSYLRAHQKIHTGEKPYKCKDCDISF 507
Cdd:COG5048   424 CSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFR 456
zf-H2C2_2 pfam13465
Zinc-finger double domain;
288-312 2.96e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.12  E-value: 2.96e-04
                          10        20
                  ....*....|....*....|....*
gi 1907124504 288 HLKRHYRIHTGEKPYKCEVCDKSFT 312
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
103-507 2.86e-14

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 75.12  E-value: 2.86e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 103 DTPHQCEKCRKCFSTASSLTVHKRIHTGKKPYKCSV--CGKSFTQCTNLKTHQRLHTGEKPYKC-KECGKSFPQLSALKS 179
Cdd:COG5048    31 PRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNsKSLPLSNSKASSSSL 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 180 HQKIHTGERPYKCKECDKSFAHCSSFRRHQKTHRAEEHCSCPEC-GKVLHQLSHLRSHYRL---HTGEKPYKCNECDRSF 255
Cdd:COG5048   111 SSSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNnSSSVNTPQSNSLHPPLpanSLSKDPSSNLSLLISS 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 256 TYYASYRRHQKTHSLDKFYKCKECGKSFLE---LSHLKRHYRIHTGEKPYKCEvcdksfTVNSTLKTHLKIHTGEKPFKC 332
Cdd:COG5048   191 NVSTSIPSSSENSPLSSSYSIPSSSSDQNLensSSSLPLTTNSQLSPKSLLSQ------SPSSLSSSDSSSSASESPRSS 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 333 ReCDKSFTKCSHLRRHQSVHTG-EKPYRCKECDKSFTECSTLRAHQ--KIHTGE--KPYKCRE--CDKSFIQRSNLIIHQ 405
Cdd:COG5048   265 L-PTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLrsVNHSGEslKPFSCPYslCGKLFSRNDALKRHI 343

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 406 RVHTGERPYICK--ECGKSFTKCST------LQIHQKIHTGEKPYKCM-ECNKSFTQDSHLRTHQRVHTGERP--YICKE 474
Cdd:COG5048   344 LLHTSISPAKEKllNSSSKFSPLLNneppqsLQQYKDLKNDKKSETLSnSCIRNFKRDSNLSLHIITHLSFRPynCKNPP 423

                         410       420       430
                  ....*....|....*....|....*....|...
gi 1907124504 475 CGKSFTRCSYLRAHQKIHTGEKPYKCKDCDISF 507
Cdd:COG5048   424 CSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFR 456
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
21-423 2.21e-12

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 69.34  E-value: 2.21e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504  21 NNYRCSKDRDGSVDLLNQDRHKSTHTGEEL--CKSEDCEKSLSLSSNLTENQRL--YAANKLQSQGEYDDDFSSVYSLMQ 96
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPsqCSYSGCDKSFSRPLELSRHLRThhNNPSDLNSKSLPLSNSKASSSSLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504  97 QTIYIGDTPHQCEKCRKCFSTASSLTVHKRIHTGKKPYKCSVCGKSFTQCTN-LKTHQRLHTGEKPykckecgKSFPQLS 175
Cdd:COG5048   112 SSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQsNSLHPPLPANSLS-------KDPSSNL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 176 ALKSHQKIHTGERPYKCKECDKSFAHCSSFRRHQKTHRAEEHCSCPECGKVLHQLSHLRSHYRLHTGEKPYKCNECDRSF 255
Cdd:COG5048   185 SLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSS 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 256 TYYASYRRHQKTHSL-------DKFYKCKECGKSFLELSHLKRHYR--IHTGE--KPYKC--EVCDKSFTVNSTLKTHLK 322
Cdd:COG5048   265 LPTASSQSSSPNESDsssekgfSLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHIL 344

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 323 IHTGEKPFKC--RECDKSFTKCSHLRRHQSV--HTGEKPYRCKECDKSFTECSTLRAH-------QKIHTGEKPYKCREC 391
Cdd:COG5048   345 LHTSISPAKEklLNSSSKFSPLLNNEPPQSLqqYKDLKNDKKSETLSNSCIRNFKRDSnlslhiiTHLSFRPYNCKNPPC 424

                         410       420       430
                  ....*....|....*....|....*....|..
gi 1907124504 392 DKSFIQRSNLIIHQRVHTGERPYICKECGKSF 423
Cdd:COG5048   425 SKSFNRHYNLIPHKKIHTNHAPLLCSILKSFR 456
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 298-378 2.39e-06

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 50.10  E-value: 2.39e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 298 GEKPYKCEV--CDKSFTVNSTLKTHlKIHTgekpfkcrECDKSFTKCSHLRRHQSVHTGEKPYRCKECDKSFTECSTLRA 375
Cdd:COG5189   346 DGKPYKCPVegCNKKYKNQNGLKYH-MLHG--------HQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                  ...
gi 1907124504 376 HQK 378
Cdd:COG5189   417 HRK 419
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
219-522 3.27e-06

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 49.69  E-value: 3.27e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 219 SCPECGKVLHQLSHLRSHYRLHTGEKPYKCNECDRSFTYY---ASYRRHQKTHSLDKFYKCKECGKSFLELSHLKRHYRI 295
Cdd:COG5048    35 SCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSrplELSRHLRTHHNNPSDLNSKSLPLSNSKASSSSLSSSS 114

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 296 HTGEKPYKCEVCDKSFTVNSTLKTHLKIHTGEKPFKCRECDKSFTKCShlrrhQSVHTgEKPYRCKECDKSFTECSTLRA 375
Cdd:COG5048   115 SNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTP-----QSNSL-HPPLPANSLSKDPSSNLSLLI 188

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 376 HQKIHTGEKPYKCRECDKSFIQRSNLIIHQRVHTGERPYICKECG----KSFTKCSTLQIHQKIHTGEKP--YKCMECNK 449
Cdd:COG5048   189 SSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSqlspKSLLSQSPSSLSSSDSSSSASesPRSSLPTA 268

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 450 SFTQDSHLRTHQRVHTGER-PYICKECGKSFTRCSYLRAHQ--KIHTGE--KPYKC--KDCDISFIQISNLRRHQRVHTG 522
Cdd:COG5048   269 SSQSSSPNESDSSSEKGFSlPIKSKQCNISFSRSSPLTRHLrsVNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTS 348
zf-H2C2_2 pfam13465
Zinc-finger double domain;
288-312 2.96e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.12  E-value: 2.96e-04
                          10        20
                  ....*....|....*....|....*
gi 1907124504 288 HLKRHYRIHTGEKPYKCEVCDKSFT 312
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 130-182 3.93e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 42.78  E-value: 3.93e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907124504 130 GKKPYKCSV--CGKSFTQCTNLKTHqRLH--------------------TGEKPYKCKECGKSFPQLSALKSHQK 182
Cdd:COG5189   346 DGKPYKCPVegCNKKYKNQNGLKYH-MLHghqnqklhenpspekmnifsAKDKPYRCEVCDKRYKNLNGLKYHRK 419
zf-H2C2_2 pfam13465
Zinc-finger double domain;
176-201 6.23e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 6.23e-04
                          10        20
                  ....*....|....*....|....*.
gi 1907124504 176 ALKSHQKIHTGERPYKCKECDKSFAH 201
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
148-171 1.29e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.20  E-value: 1.29e-03
                          10        20
                  ....*....|....*....|....
gi 1907124504 148 NLKTHQRLHTGEKPYKCKECGKSF 171
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSF 24
zf-H2C2_2 pfam13465
Zinc-finger double domain;
317-341 1.68e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 1.68e-03
                          10        20
                  ....*....|....*....|....*
gi 1907124504 317 LKTHLKIHTGEKPFKCRECDKSFTK 341
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 242-322 1.80e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 40.86  E-value: 1.80e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 242 GEKPYKCN--ECDRSFTYYASYRRHQKtHSldkfykckECGKSFLELSHLKRHYRIHTGEKPYKCEVCDKSFTVNSTLKT 319
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYHML-HG--------HQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                  ...
gi 1907124504 320 HLK 322
Cdd:COG5189   417 HRK 419
zf-H2C2_2 pfam13465
Zinc-finger double domain;
232-257 2.72e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.72e-03
                          10        20
                  ....*....|....*....|....*.
gi 1907124504 232 HLRSHYRLHTGEKPYKCNECDRSFTY 257
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
373-397 2.77e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.77e-03
                          10        20
                  ....*....|....*....|....*
gi 1907124504 373 LRAHQKIHTGEKPYKCRECDKSFIQ 397
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
344-368 2.80e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.80e-03
                          10        20
                  ....*....|....*....|....*
gi 1907124504 344 HLRRHQSVHTGEKPYRCKECDKSFT 368
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
120-145 3.41e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 3.41e-03
                          10        20
                  ....*....|....*....|....*.
gi 1907124504 120 SLTVHKRIHTGKKPYKCSVCGKSFTQ 145
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
429-453 6.78e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.27  E-value: 6.78e-03
                          10        20
                  ....*....|....*....|....*
gi 1907124504 429 LQIHQKIHTGEKPYKCMECNKSFTQ 453
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 186-271 7.91e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 38.93  E-value: 7.91e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907124504 186 GERPYKCK--ECDKSFAHCSSFrrhqKTHRAEEHCScpecgKVLHQLSHLRSHYRLHTGEKPYKCNECDRSFTYYASYRR 263
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGL----KYHMLHGHQN-----QKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                  ....*...
gi 1907124504 264 HqKTHSLD 271
Cdd:COG5189   417 H-RKHSHD 423
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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