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Conserved domains on  [gi|1907080148|ref|XP_036012248|]
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kinesin-like protein KIF1C isoform X3 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FHA_KIF1C cd22728
forkhead associated (FHA) domain found in kinesin-like protein KIF1C; KIF1C is a new ...
13-114 3.14e-73

forkhead associated (FHA) domain found in kinesin-like protein KIF1C; KIF1C is a new kinesin-like protein involved in vesicle transport from the Golgi apparatus to the endoplasmic reticulum. It has a microtubule plus end-directed motility. The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


:

Pssm-ID: 438780 [Multi-domain]  Cd Length: 102  Bit Score: 230.14  E-value: 3.14e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  13 TPHLVNLNEDPLMSECLLYHIKDGVTRVGQVDVDIKLTGQFIREQHCLFRSIPQPDGEVMVTLEPCEGAETYVNGKLVTE 92
Cdd:cd22728     1 TPHLVNLNEDPLMSECLLYHIKDGVTRVGQVDVDIKLSGQFIREQHCLFRSIPNPSGEVVVTLEPCEGAETYVNGKQVTE 80
                          90       100
                  ....*....|....*....|..
gi 1907080148  93 PLVLKSGNRIVMGKNHVFRFNH 114
Cdd:cd22728    81 PLVLKSGNRIVMGKNHVFRFNH 102
 
Name Accession Description Interval E-value
FHA_KIF1C cd22728
forkhead associated (FHA) domain found in kinesin-like protein KIF1C; KIF1C is a new ...
13-114 3.14e-73

forkhead associated (FHA) domain found in kinesin-like protein KIF1C; KIF1C is a new kinesin-like protein involved in vesicle transport from the Golgi apparatus to the endoplasmic reticulum. It has a microtubule plus end-directed motility. The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


Pssm-ID: 438780 [Multi-domain]  Cd Length: 102  Bit Score: 230.14  E-value: 3.14e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  13 TPHLVNLNEDPLMSECLLYHIKDGVTRVGQVDVDIKLTGQFIREQHCLFRSIPQPDGEVMVTLEPCEGAETYVNGKLVTE 92
Cdd:cd22728     1 TPHLVNLNEDPLMSECLLYHIKDGVTRVGQVDVDIKLSGQFIREQHCLFRSIPNPSGEVVVTLEPCEGAETYVNGKQVTE 80
                          90       100
                  ....*....|....*....|..
gi 1907080148  93 PLVLKSGNRIVMGKNHVFRFNH 114
Cdd:cd22728    81 PLVLKSGNRIVMGKNHVFRFNH 102
Kinesin_assoc pfam16183
Kinesin-associated;
11-37 1.10e-13

Kinesin-associated;


Pssm-ID: 465047 [Multi-domain]  Cd Length: 177  Bit Score: 69.49  E-value: 1.10e-13
                          10        20
                  ....*....|....*....|....*..
gi 1907080148  11 KKTPHLVNLNEDPLMSECLLYHIKDGV 37
Cdd:pfam16183 151 KKTPHLVNLNEDPLMSECLLYYIKDGI 177
FHA COG1716
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms];
31-112 1.03e-05

Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms];


Pssm-ID: 441322 [Multi-domain]  Cd Length: 96  Bit Score: 44.56  E-value: 1.03e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  31 YHIKDGVTRVG-QVDVDIKLTGQFIREQHCLFRsiPQPDGevmVTLEPCEGA-ETYVNGKLVTEPLVLKSGNRIVMGKnH 108
Cdd:COG1716    16 FPLDGGPLTIGrAPDNDIVLDDPTVSRRHARIR--RDGGG---WVLEDLGSTnGTFVNGQRVTEPAPLRDGDVIRLGK-T 89

                  ....
gi 1907080148 109 VFRF 112
Cdd:COG1716    90 ELRF 93
FHA smart00240
Forkhead associated domain; Found in eukaryotic and prokaryotic proteins. Putative nuclear ...
44-90 6.55e-04

Forkhead associated domain; Found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain.


Pssm-ID: 214578 [Multi-domain]  Cd Length: 52  Bit Score: 37.93  E-value: 6.55e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 1907080148   44 DVDIKLTGQFIREQHCLFRSipqpDGEVMVTLEPC-EGAETYVNGKLV 90
Cdd:smart00240   9 DCDIQLDGPSISRRHAVIVY----DGGGRFYLIDLgSTNGTFVNGKRI 52
 
Name Accession Description Interval E-value
FHA_KIF1C cd22728
forkhead associated (FHA) domain found in kinesin-like protein KIF1C; KIF1C is a new ...
13-114 3.14e-73

forkhead associated (FHA) domain found in kinesin-like protein KIF1C; KIF1C is a new kinesin-like protein involved in vesicle transport from the Golgi apparatus to the endoplasmic reticulum. It has a microtubule plus end-directed motility. The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


Pssm-ID: 438780 [Multi-domain]  Cd Length: 102  Bit Score: 230.14  E-value: 3.14e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  13 TPHLVNLNEDPLMSECLLYHIKDGVTRVGQVDVDIKLTGQFIREQHCLFRSIPQPDGEVMVTLEPCEGAETYVNGKLVTE 92
Cdd:cd22728     1 TPHLVNLNEDPLMSECLLYHIKDGVTRVGQVDVDIKLSGQFIREQHCLFRSIPNPSGEVVVTLEPCEGAETYVNGKQVTE 80
                          90       100
                  ....*....|....*....|..
gi 1907080148  93 PLVLKSGNRIVMGKNHVFRFNH 114
Cdd:cd22728    81 PLVLKSGNRIVMGKNHVFRFNH 102
FHA_KIF1A cd22726
forkhead associated (FHA) domain found in kinesin-like protein KIF1A; KIF1A, also called ...
13-123 6.59e-64

forkhead associated (FHA) domain found in kinesin-like protein KIF1A; KIF1A, also called axonal transporter of synaptic vesicles (ATSV), microtubule-based motor KIF1A, Unc-104- and KIF1A-related protein, or Unc-104, is an axonal transporter of synaptic vesicles, which is mutated in hereditary sensory and autonomic neuropathy type 2. It is also required for neuronal dense core vesicle (DCV) transport to dendritic spines and axons. The calcium-dependent interaction with CALM1 increases vesicle motility, and interaction with the scaffolding proteins PPFIA2 and TANC2 recruits DCVs to synaptic sites. The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


Pssm-ID: 438778 [Multi-domain]  Cd Length: 115  Bit Score: 205.93  E-value: 6.59e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  13 TPHLVNLNEDPLMSECLLYHIKDGVTRVGQVDV----DIKLTGQFIREQHCLFRSIPQPDGEVMVTLEPCEGAETYVNGK 88
Cdd:cd22726     1 TPHLVNLNEDPLMSECLLYYIKDGITRVGREDAerrqDIVLSGHFIKEEHCIFRSDTRSGGEAVVTLEPCEGADTYVNGK 80
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1907080148  89 LVTEPLVLKSGNRIVMGKNHVFRFNHPEQARLERE 123
Cdd:cd22726    81 KVTEPSILRSGNRIIMGKSHVFRFNHPEQARQERE 115
FHA_KIF1B cd22727
forkhead associated (FHA) domain found in kinesin-like protein KIF1B; KIF1B, also called Klp, ...
12-117 1.27e-61

forkhead associated (FHA) domain found in kinesin-like protein KIF1B; KIF1B, also called Klp, is a motor for anterograde transport of mitochondria. It has a microtubule plus end-directed motility. Isoform 1 mediates the transport of synaptic vesicles in neuronal cells, while isoform 2 is required for induction of neuronal apoptosis. The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


Pssm-ID: 438779 [Multi-domain]  Cd Length: 110  Bit Score: 199.88  E-value: 1.27e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  12 KTPHLVNLNEDPLMSECLLYHIKDGVTRVGQVDV----DIKLTGQFIREQHCLFRSIPQPDGEVMVTLEPCEGAETYVNG 87
Cdd:cd22727     1 KTPHLVNLNEDPLMSECLLYYIKDGITRVGQADAerrqDIVLSGAHIKEEHCIFRSERNNNGEVIVTLEPCERSETYVNG 80
                          90       100       110
                  ....*....|....*....|....*....|
gi 1907080148  88 KLVTEPLVLKSGNRIVMGKNHVFRFNHPEQ 117
Cdd:cd22727    81 KRVVQPVQLRSGNRIIMGKNHVFRFNHPEQ 110
FHA_KIF1 cd22705
forkhead associated (FHA) domain found in the kinesin-like protein KIF1 family; The KIF1 ...
13-114 5.57e-60

forkhead associated (FHA) domain found in the kinesin-like protein KIF1 family; The KIF1 family includes KIF1A, KIF1B, and KIF1C. KIF1A, also called axonal transporter of synaptic vesicles (ATSV), microtubule-based motor KIF1A, Unc-104- and KIF1A-related protein, or Unc-104, is an axonal transporter of synaptic vesicles, which is mutated in hereditary sensory and autonomic neuropathy type 2. It is also required for neuronal dense core vesicle (DCV) transport to dendritic spines and axons. The calcium-dependent interaction with CALM1 increases vesicle motility, and interaction with the scaffolding proteins PPFIA2 and TANC2 recruits DCVs to synaptic sites. KIF1B, also called Klp, is a motor for anterograde transport of mitochondria. It has a microtubule plus end-directed motility. Isoform 1 mediates the transport of synaptic vesicles in neuronal cells, while isoform 2 is required for induction of neuronal apoptosis. KIF1C is a new kinesin-like protein involved in vesicle transport from the Golgi apparatus to the endoplasmic reticulum. It has a microtubule plus end-directed motility. The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


Pssm-ID: 438757 [Multi-domain]  Cd Length: 101  Bit Score: 195.14  E-value: 5.57e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  13 TPHLVNLNEDPLMSECLLYHIKDGVTRVGQVD----VDIKLTGQFIREQHCLFRSIpqpDGEVmvTLEPCEGAETYVNGK 88
Cdd:cd22705     1 TPHLVNLNEDPLMSECLLYYIKPGITRVGRADadvpQDIQLSGTHILEEHCTFENE---DGVV--TLEPCEGALTYVNGK 75
                          90       100
                  ....*....|....*....|....*.
gi 1907080148  89 LVTEPLVLKSGNRIVMGKNHVFRFNH 114
Cdd:cd22705    76 RVTEPTRLKTGSRVILGKNHVFRFNH 101
FHA_KIF14 cd22707
forkhead associated (FHA) domain found in kinesin-like protein KIF14 and similar proteins; ...
12-115 3.42e-36

forkhead associated (FHA) domain found in kinesin-like protein KIF14 and similar proteins; KIF14 is a microtubule motor protein that binds to microtubules with high affinity through each tubulin heterodimer and has an ATPase activity. It plays a role in many processes like cell division, cytokinesis and in cell proliferation and apoptosis. KIF14 is a potential oncogene and is involved in the metastasis of various cancers. Mutations of KIF14 cause primary microcephaly by impairing cytokinesis. The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


Pssm-ID: 438759 [Multi-domain]  Cd Length: 108  Bit Score: 131.23  E-value: 3.42e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  12 KTPHLVNLNEDPLMSECLLYHIKDGVTRVGQ----VDVDIKLTGQFIREQHCLFRSIpqpdgEVMVTLEPCEGAETYVNG 87
Cdd:cd22707     6 KLPNLVNLNEDPQLSEMLLYMLKEGQTRVGRskasSSHDIQLSGALIADDHCTIENN-----GGKVTIIPVGDAETYVNG 80
                          90       100
                  ....*....|....*....|....*...
gi 1907080148  88 KLVTEPLVLKSGNRIVMGKNHVFRFNHP 115
Cdd:cd22707    81 ELISEPTVLHHGDRVILGGDHYFRFNHP 108
FHA_KIF28P cd22709
forkhead associated (FHA) domain found in kinesin-like protein KIF28P and similar proteins; ...
14-115 1.49e-31

forkhead associated (FHA) domain found in kinesin-like protein KIF28P and similar proteins; KIF28P, also called kinesin-like protein 6 (KLP6), is a microtubule-dependent motor protein required for mitochondrion morphology and transport of mitochondria in neuronal cells. The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


Pssm-ID: 438761 [Multi-domain]  Cd Length: 102  Bit Score: 118.09  E-value: 1.49e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  14 PHLVNLNEDPLMSECLLYHIKDGVTRVGQVD----VDIKLTGQFIREQHCLFRSIpqpDGEvmVTLEPC-EGAETYVNGK 88
Cdd:cd22709     1 PHLLNLNEDPQLSGVIVHFLQEGETTIGRADaepePDIVLSGLSIQKQHAVITNT---DGK--VTIEPVsPGAKVIVNGV 75
                          90       100
                  ....*....|....*....|....*..
gi 1907080148  89 LVTEPLVLKSGNRIVMGKNHVFRFNHP 115
Cdd:cd22709    76 PVTGETELHHLDRVILGSNHLYVFVGP 102
FHA_KIF16 cd22708
forkhead associated (FHA) domain found in the kinesin-like protein KIF16 family; The KIF16 ...
7-115 7.60e-31

forkhead associated (FHA) domain found in the kinesin-like protein KIF16 family; The KIF16 family includes StARD9/KIF16A and KIF16B. StARD9, also called START domain-containing protein 9, or kinesin-like protein KIF16A, is a microtubule-dependent motor protein required for spindle pole assembly during mitosis. It is required to stabilize the pericentriolar material (PCM). KIF16B, also called sorting nexin-23, is a plus end-directed microtubule-dependent motor protein involved in endosome transport and receptor recycling and degradation. It regulates the plus end motility of early endosomes and the balance between recycling and degradation of receptors such as EGF receptor (EGFR) and FGF receptor (FGFR). It regulates the Golgi to endosome transport of FGFR-containing vesicles during early development, a key process for developing basement membrane and epiblast and primitive endoderm lineages during early postimplantation development. The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


Pssm-ID: 438760 [Multi-domain]  Cd Length: 109  Bit Score: 116.22  E-value: 7.60e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148   7 SSLQKKTPHLVNLNEDPLMSECLLYHIKDGVTRVGQVDV----DIKLTGQFIREQHCLFRSIpqpDGevMVTLEPCEGAE 82
Cdd:cd22708     2 VVLDSELPHLIGIDDDLLSTGVVLYHLKEGKTRIGREDApqeqDIVLDGEDIEAEHCIIENV---GG--VVTLHPLPGAL 76
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1907080148  83 TYVNGKLVTEPLVLKSGNRIVMGKNHVFRFNHP 115
Cdd:cd22708    77 CAVNGQVITQPTRLTQGDVILLGKTNMFRFNHP 109
FHA_KIF16A_STARD9 cd22731
forkhead associated (FHA) domain found in StAR-related lipid transfer protein 9 (StARD9); ...
14-124 1.55e-27

forkhead associated (FHA) domain found in StAR-related lipid transfer protein 9 (StARD9); StARD9, also called START domain-containing protein 9, or kinesin-like protein KIF16A, is a microtubule-dependent motor protein required for spindle pole assembly during mitosis. It is required to stabilize the pericentriolar material (PCM). The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


Pssm-ID: 438783 [Multi-domain]  Cd Length: 119  Bit Score: 107.17  E-value: 1.55e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  14 PHLVNLNEDPLMSECLLYHIKDGVTRVGQVDV----DIKLTGQFIREQHCLfrsIPQPDGevMVTLEPCEGAETYVNGKL 89
Cdd:cd22731     9 PHLIAMDDDILSTGVVLYHLREGTTKIGRSDSeqeqDIVLQGPWIERDHCM---IHNECG--VVTLRPAQGAQCTVNGRE 83
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1907080148  90 VTEPLVLKSGNRIVMGKNHVFRFNHPEQARLERER 124
Cdd:cd22731    84 VTESCRLSQGAVIVLGKTHKFRFNHPAEAAILRQR 118
FHA_KIF13 cd22706
forkhead associated (FHA) domain found in the kinesin-like protein KIF13 family; The KIF13 ...
16-115 1.07e-26

forkhead associated (FHA) domain found in the kinesin-like protein KIF13 family; The KIF13 family includes KIF13A and KIF13B. KIF13A, also called kinesin-like protein RBKIN, is a plus end-directed microtubule-dependent motor protein involved in intracellular transport and in regulating various processes such as mannose-6-phosphate receptor (M6PR) transport to the plasma membrane, endosomal sorting during melanosome biogenesis, and cytokinesis. It mediates the transport of M6PR-containing vesicles from trans-Golgi network to the plasma membrane via direct interaction with the AP-1 complex. During melanosome maturation, KIF13A is required for delivering melanogenic enzymes from recycling endosomes to nascent melanosomes by creating peripheral recycling endosomal subdomains in melanocytes. It is also required for the abscission step in cytokinesis: it mediates translocation of ZFYVE26, and possibly TTC19, to the midbody during cytokinesis. KIF13B, also called kinesin-like protein GAKIN, is a novel kinesin-like protein that associates with the human homolog of the Drosophila discs large tumor suppressor in T lymphocytes. It is involved in reorganization of the cortical cytoskeleton. It regulates axon formation by promoting the formation of extra axons. KIF13B may be functionally important for the intracellular trafficking of membrane-associated guanylate kinase homologs (MAGUKs) and associated protein complexes. The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


Pssm-ID: 438758 [Multi-domain]  Cd Length: 101  Bit Score: 104.30  E-value: 1.07e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  16 LVNLNEDPLMSECLLYHIKDgVTRVGQVDV----DIKLTGQFIREQHCLfrsIPQPDGEVMVTlePCEGAETYVNGKLVT 91
Cdd:cd22706     4 LVNLNADPSLNELLVYYLKE-HTLIGRSDAptqqDIQLSGLGIQPEHCI---ITIENEDVYLT--PLEGARTCVNGSIVT 77
                          90       100
                  ....*....|....*....|....
gi 1907080148  92 EPLVLKSGNRIVMGKNHVFRFNHP 115
Cdd:cd22706    78 EKTQLRHGDRILWGNNHFFRLNCP 101
FHA_KIF16B cd22732
forkhead associated (FHA) domain found in kinesin-like protein KIF16B; KIF16B, also called ...
9-123 3.45e-21

forkhead associated (FHA) domain found in kinesin-like protein KIF16B; KIF16B, also called sorting nexin-23, is a plus end-directed microtubule-dependent motor protein involved in endosome transport and receptor recycling and degradation. It regulates the plus end motility of early endosomes and the balance between recycling and degradation of receptors such as EGF receptor (EGFR) and FGF receptor (FGFR). It regulates the Golgi to endosome transport of FGFR-containing vesicles during early development, a key process for developing basement membrane and epiblast and primitive endoderm lineages during early postimplantation development. The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


Pssm-ID: 438784 [Multi-domain]  Cd Length: 117  Bit Score: 89.22  E-value: 3.45e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148   9 LQKKTPHLVNLNEDPLMSECLLYHIKDGVTRVGQVDV----DIKLTGQFIREQHCLFRSIPQpdgevMVTLEPCEGAETY 84
Cdd:cd22732     4 LDSELPHLIGIDDDLLSTGIILYHLKEGRTYVGRDDAtteqDIVLHGLDLESEHCIFENLNG-----TVTLIPLNGAQCS 78
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1907080148  85 VNGKLVTEPLVLKSGNRIVMGKNHVFRFNHPEQARLERE 123
Cdd:cd22732    79 VNGVQITEATQLNQGAVILLGRTNMFRFNHPKEAAKLRE 117
FHA_KIF13A cd22729
forkhead associated (FHA) domain found in kinesin-like protein KIF13A; KIF13A, also called ...
16-122 5.46e-20

forkhead associated (FHA) domain found in kinesin-like protein KIF13A; KIF13A, also called kinesin-like protein RBKIN, is a plus end-directed microtubule-dependent motor protein involved in intracellular transport and in regulating various processes such as mannose-6-phosphate receptor (M6PR) transport to the plasma membrane, endosomal sorting during melanosome biogenesis, and cytokinesis. It mediates the transport of M6PR-containing vesicles from trans-Golgi network to the plasma membrane via direct interaction with the AP-1 complex. During melanosome maturation, KIF13A is required for delivering melanogenic enzymes from recycling endosomes to nascent melanosomes by creating peripheral recycling endosomal subdomains in melanocytes. It is also required for the abscission step in cytokinesis: it mediates translocation of ZFYVE26, and possibly TTC19, to the midbody during cytokinesis. The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


Pssm-ID: 438781 [Multi-domain]  Cd Length: 109  Bit Score: 85.33  E-value: 5.46e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  16 LVNLNEDPLMSECLLYHIKDGvTRVG-QVDVDIKLTGQFIREQHCLFRSipQPDGEVmvTLEPCEGAETYVNGKLVTEPL 94
Cdd:cd22729     4 LVNLNADPALNELLVYYLKDH-TRVGaDTSQDIQLFGIGIQPEHCVIDI--AADGDV--TLTPKENARTCVNGTLVCSVT 78
                          90       100
                  ....*....|....*....|....*...
gi 1907080148  95 VLKSGNRIVMGKNHVFRFNHPEQARLER 122
Cdd:cd22729    79 QLWHGDRILWGNNHFFRINLPKRKRRDW 106
FHA_KIF13B cd22730
forkhead associated (FHA) domain found in kinesin-like protein KIF13B; KIF13B, also called ...
16-115 6.15e-20

forkhead associated (FHA) domain found in kinesin-like protein KIF13B; KIF13B, also called kinesin-like protein GAKIN, is a novel kinesin-like protein that associates with the human homolog of the Drosophila discs large tumor suppressor in T lymphocytes. It is involved in reorganization of the cortical cytoskeleton. It regulates axon formation by promoting the formation of extra axons. KIF13B may be functionally important for the intracellular trafficking of membrane-associated guanylate kinase homologs (MAGUKs) and associated protein complexes. The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


Pssm-ID: 438782 [Multi-domain]  Cd Length: 99  Bit Score: 84.97  E-value: 6.15e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  16 LVNLNEDPLMSECLLYHIKDGvTRVGQVDV-DIKLTGQFIREQHCLFRSipQPDGEVMVTlePCEGAETYVNGKLVTEPL 94
Cdd:cd22730     4 LVNLNADPALNELLVYYLKEH-TLIGSADSqDIQLCGMGILPEHCIIDI--TPEGQVMLT--PQKNTRTFVNGSAVTSPI 78
                          90       100
                  ....*....|....*....|.
gi 1907080148  95 VLKSGNRIVMGKNHVFRFNHP 115
Cdd:cd22730    79 QLHHGDRILWGNNHFFRINLP 99
FHA_PHLB1 cd22713
forkhead associated (FHA) domain found in pleckstrin homology-like domain family B member 1 ...
10-118 3.39e-15

forkhead associated (FHA) domain found in pleckstrin homology-like domain family B member 1 (PHLDB1) and similar proteins; PHLDB1, also called protein LL5-alpha (LL5A), acts as an insulin-responsive protein that enhances Akt activation. PHLDB1 contains a pleckstrin homology domain, which binds phosphatidylinositol PI(3,4)P(2), PI(3,5)P(2), and PI(3,4,5)P(3), as well as a Forkhead-associated (FHA) domain and coiled coil regions. The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


Pssm-ID: 438765  Cd Length: 120  Bit Score: 71.97  E-value: 3.39e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  10 QKKTPHLVNLNEDPLMSECLLYHIKDGVTRVGQVDVD-IKLTGQFIREQHCLFRSIpqpDGEVmvTLEPCEGAETyVNGK 88
Cdd:cd22713    13 QTEKPHLVSLGSGRLSTAVTLLPLPEGKTTIGTAASDiISLQGPGVEPEHCYIENI---NGTV--TLYPCGNLCS-VDGL 86
                          90       100       110
                  ....*....|....*....|....*....|
gi 1907080148  89 LVTEPLVLKSGNRIVMGKNHVFRFNHPEQA 118
Cdd:cd22713    87 PITEPTRLTQGCMICLGRSNYFRFNHPAEA 116
FHA_AFDN cd22711
forkhead associated (FHA) domain found in afadin and similar proteins; Afadin, also called ...
14-115 9.22e-14

forkhead associated (FHA) domain found in afadin and similar proteins; Afadin, also called ALL1-fused gene from chromosome 6 protein, protein AF-6, Afadin adherens junction formation factor, or MLLT4, is a nectin- and actin-filament-binding protein that connects nectin to the actin cytoskeleton. It is essential for the organization of adherens junctions. It may play a key role in the organization of epithelial structures of the embryonic ectoderm. The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


Pssm-ID: 438763 [Multi-domain]  Cd Length: 106  Bit Score: 67.73  E-value: 9.22e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  14 PHLVNLNEDPLMSECL-LYHIKDGVTRVG------QVDVDIKLTGQFIREQHCLFRSIpqpDGEVMVTlePCEG-AETYV 85
Cdd:cd22711     2 PYLLELSPDGSDRDKPrRHRLQPNVTEVGserspaNSGQFIQLFGPDILPRHCVITHM---EGVVTVT--PASQdAETYV 76
                          90       100       110
                  ....*....|....*....|....*....|
gi 1907080148  86 NGKLVTEPLVLKSGNRIVMGKNHVFRFNHP 115
Cdd:cd22711    77 NGQRIYETTMLQHGMVVQFGRSHTFRFCDP 106
Kinesin_assoc pfam16183
Kinesin-associated;
11-37 1.10e-13

Kinesin-associated;


Pssm-ID: 465047 [Multi-domain]  Cd Length: 177  Bit Score: 69.49  E-value: 1.10e-13
                          10        20
                  ....*....|....*....|....*..
gi 1907080148  11 KKTPHLVNLNEDPLMSECLLYHIKDGV 37
Cdd:pfam16183 151 KKTPHLVNLNEDPLMSECLLYYIKDGI 177
FHA_RADIL-like cd22712
forkhead associated (FHA) domain found in the Ras-associating and dilute domain-containing ...
13-115 1.56e-10

forkhead associated (FHA) domain found in the Ras-associating and dilute domain-containing protein (Radil)-like family; The Radil-like family includes Radil and Ras-interacting protein 1 (Rain). Radil acts as an important small GTPase Rap1 effector required for cell spreading and migration. It regulates neutrophil adhesion and motility by linking Rap1 to beta2-integrin activation. Rain, also called Rasip1, is an endothelial-specific Ras-interacting protein required for the proper formation of vascular structures that develop via both vasculogenesis and angiogenesis. It acts as a critical and vascular-specific regulator of GTPase signaling, cell architecture, and adhesion, which is essential for endothelial cell morphogenesis and blood vessel tubulogenesis. Rain interacts with Ras in a GTP-dependent manner and may serve as an effector for endomembrane-associated Ras. Both Radil and Rain contain an FHA domain. The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


Pssm-ID: 438764 [Multi-domain]  Cd Length: 120  Bit Score: 58.85  E-value: 1.56e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  13 TPHLVNLNEDPLMSECLLYHIKDGVTRVGQVD-----VDIKLTGQFIREQHCLFRSIPQPDGEV----------MVTLEP 77
Cdd:cd22712     3 YPYLLTLRGFSPKQDLLVYPLLEQVILVGSRTegarkVDISLRAPDILPQHCWIRRKPEPLSDDedsdkesadyRVVLSP 82
                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1907080148  78 CEGAETYVNGKLVTEPLVLKSGNRIVMGKNHVFRFNHP 115
Cdd:cd22712    83 LRGAHVTVNGVPVLSETELHPGDLLGIGEHYLFLFKDP 120
FHA cd00060
forkhead associated (FHA) domain superfamily; Forkhead-associated (FHA) domains are small ...
15-112 1.51e-09

forkhead associated (FHA) domain superfamily; Forkhead-associated (FHA) domains are small phosphopeptide recognition modules mostly found in eubacteria and eukaryotes. It is about 95-120 residues long that fold into an 11-stranded beta-sandwich. FHA domains can mediate the recognition of phosphorylated and non-phosphorylated substrates, as well as protein oligomerization. They specifically recognize threonine phosphorylation (pThr) accompanying activation of protein serine/threonine kinases. FHA domains show diverse ligand specificity. They may recognize the pTXXD motif, the pTXXI/L motif, and TQ clusters (singly and multiply phosphorylated). In eukaryotes, FHA superfamily members include forkhead-type transcription factors, as well as other signaling proteins, such as many regulatory proteins, kinases, phosphatases, motor proteins called kinesins, and metabolic enzymes. Many of them localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. FHA domains play important roles in human diseases, particularly in relation to DNA damage responses and cancers. In bacteria, FHA domain-containing proteins may participate in injection of viral proteins into host cells, transmembrane transporters, and cell division. FHA domain-containing proteins rarely include more than one copy of the domain. The only exception in eukaryotes is the checkpoint kinase Rad53 from Saccharomyces cerevisiae, which harbors two FHA domains (FHA1 and FHA2) flanking a central kinase domain. The two FHA domains recognize different phosphorylated targets and function independently from one another. In contrast, Mycobacterium tuberculosis ABC transporter Rv1747 contains two FHA domains but only one of them is essential for protein function.


Pssm-ID: 438714 [Multi-domain]  Cd Length: 92  Bit Score: 54.97  E-value: 1.51e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  15 HLVNLNEDPLMSEcllYHIKDGVTRVG-QVDVDIKLTGQFIREQHCLFRSIpqpDGEVMVT-LEPCEGaeTYVNGKLVTE 92
Cdd:cd00060     1 RLIVLDGDGGGRE---FPLTKGVVTIGrSPDCDIVLDDPSVSRRHARIEVD---GGGVYLEdLGSTNG--TFVNGKRITP 72
                          90       100
                  ....*....|....*....|
gi 1907080148  93 PLVLKSGNRIVMGkNHVFRF 112
Cdd:cd00060    73 PVPLQDGDVIRLG-DTTFRF 91
FHA pfam00498
FHA domain; The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.
38-104 3.41e-06

FHA domain; The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.


Pssm-ID: 459831 [Multi-domain]  Cd Length: 66  Bit Score: 44.87  E-value: 3.41e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  38 TRVGQ-VDVDIKLTGQFIREQHCLFRSipqpDGEVMVTLEPC-EGAETYVNGKLVT-EPLVLKSGNRIVM 104
Cdd:pfam00498   1 VTIGRsPDCDIVLDDPSVSRRHAEIRY----DGGGRFYLEDLgSTNGTFVNGQRLGpEPVRLKDGDVIRL 66
FHA COG1716
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms];
31-112 1.03e-05

Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms];


Pssm-ID: 441322 [Multi-domain]  Cd Length: 96  Bit Score: 44.56  E-value: 1.03e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  31 YHIKDGVTRVG-QVDVDIKLTGQFIREQHCLFRsiPQPDGevmVTLEPCEGA-ETYVNGKLVTEPLVLKSGNRIVMGKnH 108
Cdd:COG1716    16 FPLDGGPLTIGrAPDNDIVLDDPTVSRRHARIR--RDGGG---WVLEDLGSTnGTFVNGQRVTEPAPLRDGDVIRLGK-T 89

                  ....
gi 1907080148 109 VFRF 112
Cdd:COG1716    90 ELRF 93
FHA_RADIL cd22733
forkhead associated (FHA) domain found in Ras-associating and dilute domain-containing protein ...
12-115 8.85e-05

forkhead associated (FHA) domain found in Ras-associating and dilute domain-containing protein (Radil); Radil acts as an important small GTPase Rap1 effector required for cell spreading and migration. It regulates neutrophil adhesion and motility through linking Rap1 to beta2-integrin activation. It contains an FHA domain. The FHA domain is a small phosphopeptide recognition module, but this group may lack the conserved residues that are required for binding phosphothreonine.


Pssm-ID: 438785  Cd Length: 113  Bit Score: 42.09  E-value: 8.85e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080148  12 KTPHLVNLNEDPLMSECLLYHIKDGVTRVGQ----VDVDIKLTGQFIREQHCLFRSIPQPDG--EVMVTLEPCEGAETYV 85
Cdd:cd22733     4 QSPHLLLLQGYNQQHDCLVYLLNREQHTVGQetpsSKPNISLSAPDILPLHCTIRRVRLPKHrsEEKLVLEPIPGAHVSV 83
                          90       100       110
                  ....*....|....*....|....*....|
gi 1907080148  86 NGKLVTEPLVLKSGNRIVMGKNHVFRFNHP 115
Cdd:cd22733    84 NFSEVERTTLLRHGDLLSFGAYYLFLFKDP 113
FHA_Ki67 cd22673
forkhead associated (FHA) domain found in proliferation marker protein Ki-67 and similar ...
46-112 1.31e-04

forkhead associated (FHA) domain found in proliferation marker protein Ki-67 and similar proteins; Ki-67, also called antigen identified by monoclonal antibody Ki-67, antigen KI-67, or antigen Ki67, acts as a biological surfactant to disperse mitotic chromosomes. It is required to maintain individual mitotic chromosomes dispersed in the cytoplasm following nuclear envelope disassembly. Ki-67 binds DNA with a preference for supercoiled DNA and AT-rich DNA. It may also play a role in chromatin organization. Ki-67 contains an FHA domain at its N-terminus. The FHA domain is a small phosphopeptide recognition module.


Pssm-ID: 438725 [Multi-domain]  Cd Length: 95  Bit Score: 41.04  E-value: 1.31e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907080148  46 DIKLTGQFIREQHCLFRsipqPDGEVMVTLEP-CEGAETYVNGKLVTEPLVLKSGNRIVMGkNHVFRF 112
Cdd:cd22673    32 DIRIQLPGVSREHCRIE----VDENGKAYLENlSTTNPTLVNGKAIEKSAELKDGDVITIG-GRSFRF 94
FHA smart00240
Forkhead associated domain; Found in eukaryotic and prokaryotic proteins. Putative nuclear ...
44-90 6.55e-04

Forkhead associated domain; Found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain.


Pssm-ID: 214578 [Multi-domain]  Cd Length: 52  Bit Score: 37.93  E-value: 6.55e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 1907080148   44 DVDIKLTGQFIREQHCLFRSipqpDGEVMVTLEPC-EGAETYVNGKLV 90
Cdd:smart00240   9 DCDIQLDGPSISRRHAVIVY----DGGGRFYLIDLgSTNGTFVNGKRI 52
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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