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penicillin-binding protein 2 [Neoroseomonas lacus]
Protein Classification
penicillin-binding protein 2 ( domain architecture ID 11496821 )
penicillin-binding protein (PBP) 2 is a membrane-associated enzyme that is involved in the synthesis of cross-linked peptidoglycan
List of domain hits
Name
Accession
Description
Interval
E-value
pbp2_mrdA
TIGR03423 penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
31-619
0e+00
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 727.39
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 31 RRA A VLG VIQ L GA FG F L GS RL YR LQV EE G AR YATL A E E NR VSARLFA PPRG R ILDR T G KVV A G NR LNWRALL V A E QTA D V 110
Cdd:TIGR03423 1 RRA L VLG GLV L AL FG V L AA RL FY LQV IR G EE YATL S E D NR IRLVPIP PPRG L ILDR N G VLL A D NR PSFSLEI V P E KVD D L 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 111 R ATL ETFS K IVP L GDHEK AR IER E MR R N RRF V P VV L RDF L SW EE M AR IE VN APD LPG IS I DMGTT R M YP ET E NL AHV V GY 190
Cdd:TIGR03423 81 D ATL DRLA K LLD L DPEDI AR FLK E LK R S RRF E P IP L KSD L TE EE V AR FA VN QYR LPG VE I EARLK R Y YP YG E LA AHV L GY 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 191 V AAPA E A D - AGDD P LLQLP G IRV G RA G V E RFHDRI LRG RA G AV EVEVNA V GRVIR E L D R REGI PG Q D VQISVETE LQ K A V 269
Cdd:TIGR03423 161 V GEIN E E D l ERLE P ANYAG G DYI G KS G I E KYYEDE LRG KP G YR EVEVNA R GRVIR T L S R VPPV PG K D LVLTIDAR LQ Q A A 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 270 LAKIEE -- G T t A V LL D A R N GE V LAM ATK PSFDPN I F NS G V S AAQWRQWTSTRST PL I N K A TN G L Y A PGSTFK MM VALAAL 347
Cdd:TIGR03423 241 EKALGG rr G A - V V VM D P R T GE I LAM VST PSFDPN L F VD G I S SKDYKALLNDPDR PL L N R A IQ G V Y P PGSTFK PV VALAAL 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 348 DAK V CR P GDTVV CPG HLDF G NN RF H C H KR S GHG AMNM R S AI MA SCDVYFY EM A R R V GID R IA SM A N RFG L G VDLD I E LPG 427
Cdd:TIGR03423 320 EEG V IT P ETRIY CPG YFQL G GR RF R C W KR G GHG RVDL R K AI EE SCDVYFY QL A L R L GID K IA EY A K RFG F G QKTG I D LPG 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 428 TRR GLVP T R A W - R QAQ G K PW SI GDT IVHG IGQG FYQL TPL S LAV M TA R LA S - G RALQ PHL TRA I G --- G RPQ R GSR PE DW 502
Cdd:TIGR03423 400 EKS GLVP S R E W k R KRF G Q PW YP GDT LNVS IGQG YVLV TPL Q LAV A TA A LA N g G KLYK PHL VKS I E dpd G GVV R RTE PE VL 479
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 503 PN L G I PDADMRLI RE A M WG V I NG G GGTA GI ARL PAQ Y g Q MAGKTGT T QV RRVTREQR erg Y NVNAV P REW R P HALFVAFA 582
Cdd:TIGR03423 480 RP L P I SPENLDVV RE G M RD V V NG P GGTA RR ARL GLP Y - K MAGKTGT A QV VSLKQGEK --- Y DAEQI P ERL R D HALFVAFA 555
570 580 590
....*....|....*....|....*....|....*..
gi 1906197645 583 P H DNP LF A LS V V VEHG MA G GAT A G PIAR D IM VEAFQR 619
Cdd:TIGR03423 556 P Y DNP KI A VA V I VEHG GG G SSA A A PIAR K IM DAYLLG 592
Name
Accession
Description
Interval
E-value
pbp2_mrdA
TIGR03423 penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
31-619
0e+00
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 727.39
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 31 RRA A VLG VIQ L GA FG F L GS RL YR LQV EE G AR YATL A E E NR VSARLFA PPRG R ILDR T G KVV A G NR LNWRALL V A E QTA D V 110
Cdd:TIGR03423 1 RRA L VLG GLV L AL FG V L AA RL FY LQV IR G EE YATL S E D NR IRLVPIP PPRG L ILDR N G VLL A D NR PSFSLEI V P E KVD D L 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 111 R ATL ETFS K IVP L GDHEK AR IER E MR R N RRF V P VV L RDF L SW EE M AR IE VN APD LPG IS I DMGTT R M YP ET E NL AHV V GY 190
Cdd:TIGR03423 81 D ATL DRLA K LLD L DPEDI AR FLK E LK R S RRF E P IP L KSD L TE EE V AR FA VN QYR LPG VE I EARLK R Y YP YG E LA AHV L GY 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 191 V AAPA E A D - AGDD P LLQLP G IRV G RA G V E RFHDRI LRG RA G AV EVEVNA V GRVIR E L D R REGI PG Q D VQISVETE LQ K A V 269
Cdd:TIGR03423 161 V GEIN E E D l ERLE P ANYAG G DYI G KS G I E KYYEDE LRG KP G YR EVEVNA R GRVIR T L S R VPPV PG K D LVLTIDAR LQ Q A A 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 270 LAKIEE -- G T t A V LL D A R N GE V LAM ATK PSFDPN I F NS G V S AAQWRQWTSTRST PL I N K A TN G L Y A PGSTFK MM VALAAL 347
Cdd:TIGR03423 241 EKALGG rr G A - V V VM D P R T GE I LAM VST PSFDPN L F VD G I S SKDYKALLNDPDR PL L N R A IQ G V Y P PGSTFK PV VALAAL 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 348 DAK V CR P GDTVV CPG HLDF G NN RF H C H KR S GHG AMNM R S AI MA SCDVYFY EM A R R V GID R IA SM A N RFG L G VDLD I E LPG 427
Cdd:TIGR03423 320 EEG V IT P ETRIY CPG YFQL G GR RF R C W KR G GHG RVDL R K AI EE SCDVYFY QL A L R L GID K IA EY A K RFG F G QKTG I D LPG 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 428 TRR GLVP T R A W - R QAQ G K PW SI GDT IVHG IGQG FYQL TPL S LAV M TA R LA S - G RALQ PHL TRA I G --- G RPQ R GSR PE DW 502
Cdd:TIGR03423 400 EKS GLVP S R E W k R KRF G Q PW YP GDT LNVS IGQG YVLV TPL Q LAV A TA A LA N g G KLYK PHL VKS I E dpd G GVV R RTE PE VL 479
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 503 PN L G I PDADMRLI RE A M WG V I NG G GGTA GI ARL PAQ Y g Q MAGKTGT T QV RRVTREQR erg Y NVNAV P REW R P HALFVAFA 582
Cdd:TIGR03423 480 RP L P I SPENLDVV RE G M RD V V NG P GGTA RR ARL GLP Y - K MAGKTGT A QV VSLKQGEK --- Y DAEQI P ERL R D HALFVAFA 555
570 580 590
....*....|....*....|....*....|....*..
gi 1906197645 583 P H DNP LF A LS V V VEHG MA G GAT A G PIAR D IM VEAFQR 619
Cdd:TIGR03423 556 P Y DNP KI A VA V I VEHG GG G SSA A A PIAR K IM DAYLLG 592
FtsI
COG0768 Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ...
24-622
0e+00
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain]
Cd Length: 568
Bit Score: 544.42
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 24 RRRGI F T RR AAV L GVIQ L GA F GF L GS RL YR LQV E EG AR YA T LAEENR VSARLFAP PRG R I L DR T G K V V A G N RLNWRALLV 103
Cdd:COG0768 5 KEKRL F R RR LLL L FLLV L LL F LL L VG RL FY LQV V EG DE YA E LAEENR IRTVPIPA PRG L I Y DR N G N V L A T N VPVYSLYAD 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 104 A E QTA D VRA T L E TFS K IVP L gdh EKARIEREMRRNR RF v PV V L RDF LS W EE M ARI ev N A PD LPG ISIDMGTT R M YP ET E N 183
Cdd:COG0768 85 P E EVK D PEE T A E KLA K LLG L --- DPEELRKKLKKKS RF - PV Y L KRN LS P EE A ARI -- R A LK LPG VYVEAEYK R Y YP YG E L 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 184 L AHV V GYV AAPAEA D agddpllqlpgi RV G RA G V E RFHDRI LRG RA G AVE VEV N A V GRVIR E L - DRREGI PG Q D VQIS -- 260
Cdd:COG0768 159 A AHV L GYV GEINGG D ------------ GI G KS G L E KAYEDL LRG TP G KRR VEV D A R GRVIR D L g EEKPPV PG K D LVLT id 226
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 261 ------ V E TE L Q KAV LAKIEEGTTA V LL D ARN GE V LAMA TK PSFDPN I F NS G vsaaqwrqwtst RST PL I N K A TN G L Y A P 334
Cdd:COG0768 227 sdlqki A E EA L K KAV EEYKAKSGAV V VM D PKT GE I LAMA SY PSFDPN L F VG G ------------ PDE PL R N R A VQ G T Y E P 294
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 335 GSTFK MMV A L AAL DAK V CR P GD T VV CPG HLDF G NNRFHCHK R S GHG AMNMRS A IMA S CD V Y FY EM A R R V GID RIASMANR 414
Cdd:COG0768 295 GSTFK PFT A A AAL EEG V IT P DT T FD CPG YYRV G GRTIRDWD R G GHG TLTLTE A LAK S SN V G FY KL A L R L GID KLYDYLKK 374
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 415 FGLG VDLD I E LPG TRR GL V P TR awrqaqg K P W SI G D T IVHG IGQG F y QL TPL S LA VMT A RL A S - G RALQ PHL TRA I gg RP 493
Cdd:COG0768 375 FGLG QKTG I D LPG EAS GL L P SP ------- K R W YP G E T ATMS IGQG L - SV TPL Q LA QAY A AI A N g G VLVK PHL VKE I -- VD 444
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 494 QR G SRPEDW P NLG --- I PDADMRLI RE A M W GV I N GG GGTA GI A RL P a Q Y g QM AGKTGT T QV RRVTREQRER G YNV navpr 570
Cdd:COG0768 445 PD G EVVKEE P EVL rrv I SPETAETV RE G M E GV V N EP GGTA RR A AI P - G Y - RV AGKTGT A QV VDIGNGGYYK G RHI ----- 517
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 1906197645 571 ewrph A L FV A FAP H DNP LF A LS VVVE HG --- MA GG AT A G P IA R D IM VEAFQR LGP 622
Cdd:COG0768 518 ----- A S FV G FAP A DNP RY A VA VVVE NP ggg AY GG TV A A P VF R E IM EAYLRL LGP 567
PRK10795
PRK10795 penicillin-binding protein 2; Provisional
28-613
4.03e-119
penicillin-binding protein 2; Provisional
Pssm-ID: 236761 [Multi-domain]
Cd Length: 634
Bit Score: 367.94
E-value: 4.03e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 28 I F T RRA -- A V LG VIQ L G af G F L GSR LY R LQ VEEGAR Y A T LAE ENR VSARLF AP P RG R I L DR T G KVV A G NR LNWRALLVA E 105
Cdd:PRK10795 17 L F V RRA lv A F LG ILL L T -- G V L IAN LY N LQ IVRFTD Y Q T RSN ENR IKLVPI AP S RG I I Y DR N G TPL A L NR TIYQLEMMP E 94
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 106 QTADVRA TL ETFSKI V P L G D HEK A RIER E MR R N RRF VPVVLRDF L SWEEM AR IE VN APDL PG ISIDMGTT R M YP ETEN L A 185
Cdd:PRK10795 95 KVDNLQQ TL DALRSV V D L T D DDI A AFRK E RA R S RRF TSIPVKTN L TEVQV AR FA VN QYRF PG VEVKGYQR R Y YP YGSA L T 174
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 186 HV V GYV aap AEADAG D DPL L QLP G I -------- RV G RA G V ER FHDRI L R G RA G AV EVEVN AV GRVIR E L DRREGIP G Q D V 257
Cdd:PRK10795 175 HV I GYV --- SKINDK D VER L DKE G K lanyaath DI G KL G I ER YYEDV L H G KT G YE EVEVN NR GRVIR Q L HEQPPQA G H D I 251
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 258 QISVETE LQ KAV l AKIEE G TT A -- V LL D A R N G EV LA MATK PS F DPN I F NS G V S AAQWRQWTSTRST PLIN K AT N G L Y A P G 335
Cdd:PRK10795 252 YLTLDLK LQ QYI - ETLLA G SR A av V VT D P R T G GI LA LVST PS Y DPN L F VD G I S SKDYSGLLNDPNR PLIN R AT Q G V Y P P A 330
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 336 ST F K MM VA LA AL D A K V CRPGDTVVC PG -- H L DFGNN R FHCH K RS GHG AM N MRSAIMA S C D VY FY EM A RRV GIDR IASMAN 413
Cdd:PRK10795 331 ST V K PY VA VS AL S A G V ITRNTSLFD PG ww Q L PGSEK R YRDW K KW GHG RL N VTKSLEE S A D TF FY QV A YDM GIDR LSEWMG 410
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 414 R FG L G VDLD I E L PGT R R G LV PTR A W R Q AQ - G KPW SI GDTI VH GIGQG FYQL TP LSLA - VMTARLAS G RALQ PHL TRA -- I 489
Cdd:PRK10795 411 K FG Y G HYTG I D L AEE R S G NM PTR E W K Q KR f K KPW YQ GDTI PV GIGQG YWTA TP IQMS k ALMTLIND G IVKV PHL LMS ta E 490
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 490 G G RPQRGSR P EDW P NLG I PDADMRLIREA M W GV I N GGG GTA GIARLP A Q Y g QM A G K T GT T QV RRVTREQR erg YN VNAVP 569
Cdd:PRK10795 491 D G KQVPWVQ P HEP P VGD I HSGYWEIAKDG M Y GV A N RPN GTA HKYFAS A P Y - KI A A K S GT A QV FGLKANET --- YN AHKIA 566
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 1906197645 570 REW R P H A L FV AFAP HD NP LF A LSVVV E H G M AG G A t A G P I A R D I M 613
Cdd:PRK10795 567 ERL R D H K L MT AFAP YN NP QV A VAIIL E N G G AG P A - V G T I M R Q I L 609
Transpeptidase
pfam00905 Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ...
278-613
5.94e-68
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain]
Cd Length: 296
Bit Score: 223.45
E-value: 5.94e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 278 T AV L LD ARN GEVLAM AT KPS F DPN I F N sgvsaaqwrqwtstrs T PL I N K A TNGL Y A PGSTFK MMV ALAALD AK V CR P GD T 357
Cdd:pfam00905 2 S AV V LD PKT GEVLAM VG KPS Y DPN G F I ---------------- G PL R N R A VTSR Y E PGSTFK PFT ALAALD NG V LK P DE T 65
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 358 VVCPGHLDF G NNRFHCHKRSGH G AMNM R S A IMA S CDV Y FYEM A RRV G I D RIA S MANR FG L G VDLD I E LPG TRR G LVPTR a 437
Cdd:pfam00905 66 IFDWPGKQQ G GKSIGDWNQDQV G IGTL R Q A LEY S SNW Y MQKL A QKL G A D KLR S YLKK FG Y G NKTG I G LPG ENA G YLTPY - 144
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 438 wrqaqgkp W SI G D T IVH GIG qgf YQL TPL SL A VMT A RL A S - G RALQ PHL TRA I GGRPQ rgsr P EDWPN L G I PDADMRLIR 516
Cdd:pfam00905 145 -------- W LE G A T ASF GIG --- LTI TPL QQ A QAY A AI A N g G KLVP PHL VKS I EDKVD ---- P KVLNK L P I SKSTAEKVK 209
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 517 EAMWG V I N G G G GT AGI A RLP aqy GQM AGKTGT T QV rrvtreqrer GYNVNAVPREWRPHAL FV AF AP H DNP LF A LS V VVE 596
Cdd:pfam00905 210 DMLRL V V N D G T GT GTA A VPG --- YKV AGKTGT A QV ---------- AGPKGGGYYDGAQIGW FV GY AP A DNP KY A FA V LID 276
330
....*....|....*....
gi 1906197645 597 -- HGMA GG AT A G PI AR DI M 613
Cdd:pfam00905 277 dp KRYY GG KV A A PI FK DI L 295
Name
Accession
Description
Interval
E-value
pbp2_mrdA
TIGR03423 penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
31-619
0e+00
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 727.39
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 31 RRA A VLG VIQ L GA FG F L GS RL YR LQV EE G AR YATL A E E NR VSARLFA PPRG R ILDR T G KVV A G NR LNWRALL V A E QTA D V 110
Cdd:TIGR03423 1 RRA L VLG GLV L AL FG V L AA RL FY LQV IR G EE YATL S E D NR IRLVPIP PPRG L ILDR N G VLL A D NR PSFSLEI V P E KVD D L 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 111 R ATL ETFS K IVP L GDHEK AR IER E MR R N RRF V P VV L RDF L SW EE M AR IE VN APD LPG IS I DMGTT R M YP ET E NL AHV V GY 190
Cdd:TIGR03423 81 D ATL DRLA K LLD L DPEDI AR FLK E LK R S RRF E P IP L KSD L TE EE V AR FA VN QYR LPG VE I EARLK R Y YP YG E LA AHV L GY 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 191 V AAPA E A D - AGDD P LLQLP G IRV G RA G V E RFHDRI LRG RA G AV EVEVNA V GRVIR E L D R REGI PG Q D VQISVETE LQ K A V 269
Cdd:TIGR03423 161 V GEIN E E D l ERLE P ANYAG G DYI G KS G I E KYYEDE LRG KP G YR EVEVNA R GRVIR T L S R VPPV PG K D LVLTIDAR LQ Q A A 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 270 LAKIEE -- G T t A V LL D A R N GE V LAM ATK PSFDPN I F NS G V S AAQWRQWTSTRST PL I N K A TN G L Y A PGSTFK MM VALAAL 347
Cdd:TIGR03423 241 EKALGG rr G A - V V VM D P R T GE I LAM VST PSFDPN L F VD G I S SKDYKALLNDPDR PL L N R A IQ G V Y P PGSTFK PV VALAAL 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 348 DAK V CR P GDTVV CPG HLDF G NN RF H C H KR S GHG AMNM R S AI MA SCDVYFY EM A R R V GID R IA SM A N RFG L G VDLD I E LPG 427
Cdd:TIGR03423 320 EEG V IT P ETRIY CPG YFQL G GR RF R C W KR G GHG RVDL R K AI EE SCDVYFY QL A L R L GID K IA EY A K RFG F G QKTG I D LPG 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 428 TRR GLVP T R A W - R QAQ G K PW SI GDT IVHG IGQG FYQL TPL S LAV M TA R LA S - G RALQ PHL TRA I G --- G RPQ R GSR PE DW 502
Cdd:TIGR03423 400 EKS GLVP S R E W k R KRF G Q PW YP GDT LNVS IGQG YVLV TPL Q LAV A TA A LA N g G KLYK PHL VKS I E dpd G GVV R RTE PE VL 479
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 503 PN L G I PDADMRLI RE A M WG V I NG G GGTA GI ARL PAQ Y g Q MAGKTGT T QV RRVTREQR erg Y NVNAV P REW R P HALFVAFA 582
Cdd:TIGR03423 480 RP L P I SPENLDVV RE G M RD V V NG P GGTA RR ARL GLP Y - K MAGKTGT A QV VSLKQGEK --- Y DAEQI P ERL R D HALFVAFA 555
570 580 590
....*....|....*....|....*....|....*..
gi 1906197645 583 P H DNP LF A LS V V VEHG MA G GAT A G PIAR D IM VEAFQR 619
Cdd:TIGR03423 556 P Y DNP KI A VA V I VEHG GG G SSA A A PIAR K IM DAYLLG 592
FtsI
COG0768 Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ...
24-622
0e+00
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain]
Cd Length: 568
Bit Score: 544.42
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 24 RRRGI F T RR AAV L GVIQ L GA F GF L GS RL YR LQV E EG AR YA T LAEENR VSARLFAP PRG R I L DR T G K V V A G N RLNWRALLV 103
Cdd:COG0768 5 KEKRL F R RR LLL L FLLV L LL F LL L VG RL FY LQV V EG DE YA E LAEENR IRTVPIPA PRG L I Y DR N G N V L A T N VPVYSLYAD 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 104 A E QTA D VRA T L E TFS K IVP L gdh EKARIEREMRRNR RF v PV V L RDF LS W EE M ARI ev N A PD LPG ISIDMGTT R M YP ET E N 183
Cdd:COG0768 85 P E EVK D PEE T A E KLA K LLG L --- DPEELRKKLKKKS RF - PV Y L KRN LS P EE A ARI -- R A LK LPG VYVEAEYK R Y YP YG E L 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 184 L AHV V GYV AAPAEA D agddpllqlpgi RV G RA G V E RFHDRI LRG RA G AVE VEV N A V GRVIR E L - DRREGI PG Q D VQIS -- 260
Cdd:COG0768 159 A AHV L GYV GEINGG D ------------ GI G KS G L E KAYEDL LRG TP G KRR VEV D A R GRVIR D L g EEKPPV PG K D LVLT id 226
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 261 ------ V E TE L Q KAV LAKIEEGTTA V LL D ARN GE V LAMA TK PSFDPN I F NS G vsaaqwrqwtst RST PL I N K A TN G L Y A P 334
Cdd:COG0768 227 sdlqki A E EA L K KAV EEYKAKSGAV V VM D PKT GE I LAMA SY PSFDPN L F VG G ------------ PDE PL R N R A VQ G T Y E P 294
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 335 GSTFK MMV A L AAL DAK V CR P GD T VV CPG HLDF G NNRFHCHK R S GHG AMNMRS A IMA S CD V Y FY EM A R R V GID RIASMANR 414
Cdd:COG0768 295 GSTFK PFT A A AAL EEG V IT P DT T FD CPG YYRV G GRTIRDWD R G GHG TLTLTE A LAK S SN V G FY KL A L R L GID KLYDYLKK 374
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 415 FGLG VDLD I E LPG TRR GL V P TR awrqaqg K P W SI G D T IVHG IGQG F y QL TPL S LA VMT A RL A S - G RALQ PHL TRA I gg RP 493
Cdd:COG0768 375 FGLG QKTG I D LPG EAS GL L P SP ------- K R W YP G E T ATMS IGQG L - SV TPL Q LA QAY A AI A N g G VLVK PHL VKE I -- VD 444
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 494 QR G SRPEDW P NLG --- I PDADMRLI RE A M W GV I N GG GGTA GI A RL P a Q Y g QM AGKTGT T QV RRVTREQRER G YNV navpr 570
Cdd:COG0768 445 PD G EVVKEE P EVL rrv I SPETAETV RE G M E GV V N EP GGTA RR A AI P - G Y - RV AGKTGT A QV VDIGNGGYYK G RHI ----- 517
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 1906197645 571 ewrph A L FV A FAP H DNP LF A LS VVVE HG --- MA GG AT A G P IA R D IM VEAFQR LGP 622
Cdd:COG0768 518 ----- A S FV G FAP A DNP RY A VA VVVE NP ggg AY GG TV A A P VF R E IM EAYLRL LGP 567
PRK10795
PRK10795 penicillin-binding protein 2; Provisional
28-613
4.03e-119
penicillin-binding protein 2; Provisional
Pssm-ID: 236761 [Multi-domain]
Cd Length: 634
Bit Score: 367.94
E-value: 4.03e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 28 I F T RRA -- A V LG VIQ L G af G F L GSR LY R LQ VEEGAR Y A T LAE ENR VSARLF AP P RG R I L DR T G KVV A G NR LNWRALLVA E 105
Cdd:PRK10795 17 L F V RRA lv A F LG ILL L T -- G V L IAN LY N LQ IVRFTD Y Q T RSN ENR IKLVPI AP S RG I I Y DR N G TPL A L NR TIYQLEMMP E 94
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 106 QTADVRA TL ETFSKI V P L G D HEK A RIER E MR R N RRF VPVVLRDF L SWEEM AR IE VN APDL PG ISIDMGTT R M YP ETEN L A 185
Cdd:PRK10795 95 KVDNLQQ TL DALRSV V D L T D DDI A AFRK E RA R S RRF TSIPVKTN L TEVQV AR FA VN QYRF PG VEVKGYQR R Y YP YGSA L T 174
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 186 HV V GYV aap AEADAG D DPL L QLP G I -------- RV G RA G V ER FHDRI L R G RA G AV EVEVN AV GRVIR E L DRREGIP G Q D V 257
Cdd:PRK10795 175 HV I GYV --- SKINDK D VER L DKE G K lanyaath DI G KL G I ER YYEDV L H G KT G YE EVEVN NR GRVIR Q L HEQPPQA G H D I 251
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 258 QISVETE LQ KAV l AKIEE G TT A -- V LL D A R N G EV LA MATK PS F DPN I F NS G V S AAQWRQWTSTRST PLIN K AT N G L Y A P G 335
Cdd:PRK10795 252 YLTLDLK LQ QYI - ETLLA G SR A av V VT D P R T G GI LA LVST PS Y DPN L F VD G I S SKDYSGLLNDPNR PLIN R AT Q G V Y P P A 330
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 336 ST F K MM VA LA AL D A K V CRPGDTVVC PG -- H L DFGNN R FHCH K RS GHG AM N MRSAIMA S C D VY FY EM A RRV GIDR IASMAN 413
Cdd:PRK10795 331 ST V K PY VA VS AL S A G V ITRNTSLFD PG ww Q L PGSEK R YRDW K KW GHG RL N VTKSLEE S A D TF FY QV A YDM GIDR LSEWMG 410
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 414 R FG L G VDLD I E L PGT R R G LV PTR A W R Q AQ - G KPW SI GDTI VH GIGQG FYQL TP LSLA - VMTARLAS G RALQ PHL TRA -- I 489
Cdd:PRK10795 411 K FG Y G HYTG I D L AEE R S G NM PTR E W K Q KR f K KPW YQ GDTI PV GIGQG YWTA TP IQMS k ALMTLIND G IVKV PHL LMS ta E 490
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 490 G G RPQRGSR P EDW P NLG I PDADMRLIREA M W GV I N GGG GTA GIARLP A Q Y g QM A G K T GT T QV RRVTREQR erg YN VNAVP 569
Cdd:PRK10795 491 D G KQVPWVQ P HEP P VGD I HSGYWEIAKDG M Y GV A N RPN GTA HKYFAS A P Y - KI A A K S GT A QV FGLKANET --- YN AHKIA 566
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 1906197645 570 REW R P H A L FV AFAP HD NP LF A LSVVV E H G M AG G A t A G P I A R D I M 613
Cdd:PRK10795 567 ERL R D H K L MT AFAP YN NP QV A VAIIL E N G G AG P A - V G T I M R Q I L 609
Transpeptidase
pfam00905 Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ...
278-613
5.94e-68
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain]
Cd Length: 296
Bit Score: 223.45
E-value: 5.94e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 278 T AV L LD ARN GEVLAM AT KPS F DPN I F N sgvsaaqwrqwtstrs T PL I N K A TNGL Y A PGSTFK MMV ALAALD AK V CR P GD T 357
Cdd:pfam00905 2 S AV V LD PKT GEVLAM VG KPS Y DPN G F I ---------------- G PL R N R A VTSR Y E PGSTFK PFT ALAALD NG V LK P DE T 65
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 358 VVCPGHLDF G NNRFHCHKRSGH G AMNM R S A IMA S CDV Y FYEM A RRV G I D RIA S MANR FG L G VDLD I E LPG TRR G LVPTR a 437
Cdd:pfam00905 66 IFDWPGKQQ G GKSIGDWNQDQV G IGTL R Q A LEY S SNW Y MQKL A QKL G A D KLR S YLKK FG Y G NKTG I G LPG ENA G YLTPY - 144
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 438 wrqaqgkp W SI G D T IVH GIG qgf YQL TPL SL A VMT A RL A S - G RALQ PHL TRA I GGRPQ rgsr P EDWPN L G I PDADMRLIR 516
Cdd:pfam00905 145 -------- W LE G A T ASF GIG --- LTI TPL QQ A QAY A AI A N g G KLVP PHL VKS I EDKVD ---- P KVLNK L P I SKSTAEKVK 209
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 517 EAMWG V I N G G G GT AGI A RLP aqy GQM AGKTGT T QV rrvtreqrer GYNVNAVPREWRPHAL FV AF AP H DNP LF A LS V VVE 596
Cdd:pfam00905 210 DMLRL V V N D G T GT GTA A VPG --- YKV AGKTGT A QV ---------- AGPKGGGYYDGAQIGW FV GY AP A DNP KY A FA V LID 276
330
....*....|....*....
gi 1906197645 597 -- HGMA GG AT A G PI AR DI M 613
Cdd:pfam00905 277 dp KRYY GG KV A A PI FK DI L 295
PBP_dimer
pfam03717 Penicillin-binding Protein dimerization domain; This domain is found at the N terminus of ...
78-245
2.12e-43
Penicillin-binding Protein dimerization domain; This domain is found at the N terminus of Class B High Molecular Weight Penicillin-Binding Proteins. Its function has not been precisely defined, but is strongly implicated in PBP polymerization. The domain forms a largely disordered 'sugar tongs' structure.
Pssm-ID: 427460 [Multi-domain]
Cd Length: 178
Bit Score: 153.63
E-value: 2.12e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 78 P PRG R I L DR T G K V V A G N RLNWRALLVAEQTADVR A -- T LETFS K IVPLGDH - EKARIE --- RE M RRNRRFV PVV LRDF LS 151
Cdd:pfam03717 4 A PRG E I Y DR N G V V L A T N KPVYSLTITPSKLKKAD A lk T ALKLA K LLSNYED l DDEDLT erf LK M NSYKSYY PVV IKKN LS 83
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 152 W EE M ARIE V N APD LPG I SI DMGTT R M YP ET E NL AH VV GYV AA -- PA E ADAGD D PLLQ l P G IR VG RA G V E RFHDRI LRG RA 229
Cdd:pfam03717 84 E EE V ARIE E N LLE LPG V SI ETDPV R Y YP YG E LA AH LL GYV GE it EE E LEKYL D KGYS - R G DL VG KS G L E KQYESV LRG KD 162
170
....*....|....*.
gi 1906197645 230 G AVE VEV N A V GRVIRE 245
Cdd:pfam03717 163 G VRQ VEV D A L GRVIRE 178
PRK15105
PRK15105 peptidoglycan synthase FtsI; Provisional
165-613
1.02e-26
peptidoglycan synthase FtsI; Provisional
Pssm-ID: 185060 [Multi-domain]
Cd Length: 578
Bit Score: 114.92
E-value: 1.02e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 165 LPGI SIDMGTT R M YP ET E NL AH VV G YVAAPAE adagddpllqlpgirv G RA GVE RFH D RI L R G RA G AVE V EVNAV GRVI R 244
Cdd:PRK15105 155 LPGI HLREESR R Y YP SG E VT AH LI G FTNVDSQ ---------------- G IE GVE KSF D KW L T G QP G ERI V RKDRY GRVI E 218
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 245 ELDRREGIPGQDVQI S VETE LQ -------- K AV LAKIE E GTT AVL L D ARN GEVLAMA TK PS FD PN IF nsgvsaaqwrqw T 316
Cdd:PRK15105 219 DISSTDSQAAHNLAL S IDER LQ alvyreln N AV AFNKA E SGS AVL V D VNT GEVLAMA NS PS YN PN NL ------------ S 286
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 317 S T RSTPLI N K A TNGLYA PGST F K M MV ALA AL DAK V CRP g DT V V cp GHLDFGN N RFHCHKRSGHGAMNMRSAIMA S CD V YF 396
Cdd:PRK15105 287 G T PKDAMR N R A ITDVFE PGST V K P MV VMT AL QRG V VKE - NS V L -- NTVPYRI N GHEIKDVARYSELTLTGVLQK S SN V GV 363
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 397 YEM A RRVGIDRIASMAN RFGLG VDLDIE L P G T R R GL V P trawrqa Q GKP WS IGDTIVHGI G Q G F y QL TPL S LA VMT A RLA 476
Cdd:PRK15105 364 SKL A LAMPSSALVDTYS RFGLG KATNLG L V G E R S GL Y P ------- Q KQR WS DIERATFSF G Y G L - MV TPL Q LA RVY A TIG 435
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 477 S GRALQ P - HL T RA ig GR P QR G S R P edwpnlg I P DADM R LIREA M WG V - IN GGGG T agia RLPAQYGQM A G KTGT T qv RR V 554
Cdd:PRK15105 436 S YGIYR P l SI T KV -- DP P VP G E R V ------- F P ESIV R TVVHM M ES V a LP GGGG V ---- KAAIKGYRI A I KTGT A -- KK V 500
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1906197645 555 TRE qrer G YNV N avprew RPH A LFVAF AP HDN P L FAL S VV VEHGM A ---- GGA TAG P IARD IM 613
Cdd:PRK15105 501 GPD ---- G RYI N ------ KYI A YTAGV AP ASQ P R FAL V VV INDPQ A gkyy GGA VSA P VFGA IM 553
MrcB
COG0744 Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall ...
266-624
1.44e-24
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440507 [Multi-domain]
Cd Length: 630
Bit Score: 108.47
E-value: 1.44e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 266 Q KAV LAKIE EG TT ------ A V LL D ARN GEVLAM ATKPSFDPNI F nsgvsaaqwrqwtstrstpli N K AT NGLYA PGSTFK 339
Cdd:COG0744 310 E KAV KNVLP EG KP gglqaa L V VV D PKT GEVLAM VGGRDYGKSQ F --------------------- N R AT QAKRQ PGSTFK 368
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 340 MM V AL AAL DAKV c R P GD TV VC - P GHLDF G NNRFHCHKRSGH G AMNM R S A IMA S CDVYFYEM A RR VG I D RIASM A N R F G LG 418
Cdd:COG0744 369 PF V YA AAL EQGY - T P AT TV DD e P VTFPG G GWSPKNYDGRYR G PVTL R E A LAN S LNTPAVRL A QE VG L D KVVDT A R R L G IT 447
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 419 VD LD ielpgtrrg LV P TR A wrqaqgkpwsigdtivhg I G Q gf YQLT PL SL A VMT A RL A S - G RALQ PH LTRAIGGR pq R G S 497
Cdd:COG0744 448 SP LD --------- PN P SL A ------------------ L G T -- SEVS PL EM A SAY A TF A N g G VYVE PH AITKVTDA -- D G K 496
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 498 --- RPEDWPNLG I PDADMR L IREAMWG V ING G G G T A gi ARLP AQ yg QM AGKTGTT Q vrrvtreqrergynvnavpr EW R p 574
Cdd:COG0744 497 vly EAKPKCEQV I SPEVAY L MTDMLQD V VTS G T G R A -- ARLP GR -- PV AGKTGTT N -------------------- DN R - 551
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1906197645 575 H A L FV AFA P H dnplfa L SVV V --------- EHGMA GG ATAG PI A RD I M VE A FQR L GPQR 624
Cdd:COG0744 552 D A W FV GYT P Q ------ L VTA V wvgnddnsp MGYVT GG SLPA PI W RD F M EA A LEG L PVED 604
MrcA
COG5009 Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis];
200-623
2.13e-09
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 444033 [Multi-domain]
Cd Length: 785
Bit Score: 60.56
E-value: 2.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 200 G DDPL L Q L P G IRVG R agve RFHDRIL RG R A GAVEVE V NAV G R VIR E ldrr EGIPGQDVQISVET E L Q K A VL A kieegtta 279
Cdd:COG5009 364 G ETGT L P L E G LKWA R ---- PYINDNR RG P A PKSASD V LKP G D VIR V ---- RPVADGGWRLRQIP E V Q G A LV A -------- 427
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 280 vl LD ARN G E VLA MATKPS F DPNI FN SGVS A aq W RQ wtstrstplinkatnglya PGS T FK MM V AL AAL ----------- D 348
Cdd:COG5009 428 -- LD PHT G A VLA LVGGFD F EQSK FN RATQ A -- K RQ ------------------- PGS S FK PF V YA AAL dngytpatiin D 484
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 349 A KVCRP --- G DT V VC P GHLD fgn NR F hchkrsg H G AMNM R S A I ----- MASCDV yfyem ARR VGID RIASM A N RFG LGVD 420
Cdd:COG5009 485 A PIVFD dgg G GG V WR P KNYS --- GK F ------- Y G PTTL R E A L eksrn LVTVRL ----- LQD VGID YVIDY A E RFG IYSK 549
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 421 L DIE L P --- G T rrgl VPTRAWRQ A QG ----------- K P WS I g D T I VHGI G QGF Y QLT P lsla VMTARLASGRALQPHLT 486
Cdd:COG5009 550 L PPN L S lal G S ---- GEVTPLEM A RA yavfanggyrv E P YL I - D R I EDRN G KVI Y RAD P ---- ARACEDCDAAEWDGAEP 620
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1906197645 487 R AIGGRP Q rgsrpedwpnl G I PDADMRLIREAMW GV IN gg G GT AGI AR - L PA qyg QM AGKTGTT Q vrrvtr EQR ergynv 565
Cdd:COG5009 621 R LPDPAE Q ----------- V I DPRTAYQMTSMLR GV VQ -- R GT GRR AR a L GR --- DI AGKTGTT N ------ DSK ------ 672
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1906197645 566 N A vpre W rphal FV A F A P H dnplfa L SVV V ---------- EH G MA GG AT A G PI AR D I M VE A FQRLGPQ 623
Cdd:COG5009 673 D A ---- W ----- FV G F T P D ------ L VAG V wvgfddprsl GR G ET GG RA A L PI WI D F M KA A LKDKPEK 725
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
