|
Name |
Accession |
Description |
Interval |
E-value |
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
50-243 |
2.45e-45 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 151.20 E-value: 2.45e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 50 KLMYNRWGLVMLSMYDTMLNMMKSQMGMRGGYYFPLMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLTML 129
Cdd:TIGR01131 38 WLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTIS 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 130 GFVNHGLNFFSLFVPTGTPLALVPVLVLIETLSYSSRAISLGLRLSSNILAGHLTMLILGSLILSLMNSSLIGfslgfIP 209
Cdd:TIGR01131 118 GFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLLFSLMSSAIFA-----LL 192
|
170 180 190
....*....|....*....|....*....|....
gi 1904806547 210 IMGVIAIVILEFAISMIQAYVFCITLSGYLKDAI 243
Cdd:TIGR01131 193 LLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP6 |
MTH00175 |
ATP synthase F0 subunit 6; Provisional |
1-246 |
7.15e-42 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177228 Cd Length: 244 Bit Score: 142.84 E-value: 7.15e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 1 MMNSPLEQFEMKSLLTMNNMYMFSMSNYVLYLMLVSMMMMMYMVSLSKTKLMYNRWGLVMLSMYDTMLNMMKSQMGMRGG 80
Cdd:MTH00175 1 MLAAYFDQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 81 YYFPLMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLTMLGFVNHGLNFFSLFVPTGTPLALVPVLVLIET 160
Cdd:MTH00175 81 KYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 161 LSYSSRAISLGLRLSSNILAGHLTMLILGSLILSLMNSSLIgfSLGFIPIMGVIAIVILEFAISMIQAYVFCITLSGYLK 240
Cdd:MTH00175 161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLI--ILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLG 238
|
....*.
gi 1904806547 241 DAIYLH 246
Cdd:MTH00175 239 DTIALH 244
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
82-240 |
3.85e-33 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 117.50 E-value: 3.85e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 82 YFPLMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLTMLGFVNHGLNFFSLFVPTGTPLALVPVLVLIETL 161
Cdd:cd00310 4 YLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELI 83
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1904806547 162 SYSSRAISLGLRLSSNILAGHLTMLILGSLilslmnSSLIGFSLGFIPIMGVIAIVILEFAISMIQAYVFCITLSGYLK 240
Cdd:cd00310 84 SELIRPLSLSVRLFANMFAGHLLLALLSGL------VPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
54-240 |
1.01e-31 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 115.66 E-value: 1.01e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 54 NRWGLVMLSMYDTMLNMMKSQMGMRGGY-YFPLMFTLFNFMLMANLMSMM---PYTFAMSAQMVFMMSLSLTLWLGLTML 129
Cdd:pfam00119 28 GRLQNFVEMLVEFVDNIVKDNIGKKKGRkFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYY 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 130 GFVNHGLN--FFSLFVPtGTPLALVPVLVLIETLSYSSRAISLGLRLSSNILAGHLTMLILGSLILSLMNsslIGFSLGF 207
Cdd:pfam00119 108 GIKKHGLGgyFKKLFVP-PVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLS---AGFLLGV 183
|
170 180 190
....*....|....*....|....*....|...
gi 1904806547 208 IPIMGVIAIVILEFAISMIQAYVFCITLSGYLK 240
Cdd:pfam00119 184 IPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
48-243 |
3.84e-22 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 90.52 E-value: 3.84e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 48 KTKLMYNRWGLVMLSMYDTMLNMMKSQMGMRGGYYFPLMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLT 127
Cdd:COG0356 23 KLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVH 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 128 MLGFVNHGLNFF--SLFVPTGTPLAlvPVLVLIETLSYSSRAISLGLRLSSNILAGHLTMLILGSLILSlmnssligFSL 205
Cdd:COG0356 103 YYGIKKKGLGGYlkHLFFPPFPWLA--PLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPF--------LLL 172
|
170 180 190
....*....|....*....|....*....|....*...
gi 1904806547 206 GFIPIMGVIAIVILEFAISMIQAYVFCITLSGYLKDAI 243
Cdd:COG0356 173 GVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAV 210
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
50-243 |
2.45e-45 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 151.20 E-value: 2.45e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 50 KLMYNRWGLVMLSMYDTMLNMMKSQMGMRGGYYFPLMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLTML 129
Cdd:TIGR01131 38 WLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTIS 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 130 GFVNHGLNFFSLFVPTGTPLALVPVLVLIETLSYSSRAISLGLRLSSNILAGHLTMLILGSLILSLMNSSLIGfslgfIP 209
Cdd:TIGR01131 118 GFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLLFSLMSSAIFA-----LL 192
|
170 180 190
....*....|....*....|....*....|....
gi 1904806547 210 IMGVIAIVILEFAISMIQAYVFCITLSGYLKDAI 243
Cdd:TIGR01131 193 LLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP6 |
MTH00175 |
ATP synthase F0 subunit 6; Provisional |
1-246 |
7.15e-42 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177228 Cd Length: 244 Bit Score: 142.84 E-value: 7.15e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 1 MMNSPLEQFEMKSLLTMNNMYMFSMSNYVLYLMLVSMMMMMYMVSLSKTKLMYNRWGLVMLSMYDTMLNMMKSQMGMRGG 80
Cdd:MTH00175 1 MLAAYFDQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 81 YYFPLMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLTMLGFVNHGLNFFSLFVPTGTPLALVPVLVLIET 160
Cdd:MTH00175 81 KYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 161 LSYSSRAISLGLRLSSNILAGHLTMLILGSLILSLMNSSLIgfSLGFIPIMGVIAIVILEFAISMIQAYVFCITLSGYLK 240
Cdd:MTH00175 161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLI--ILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLG 238
|
....*.
gi 1904806547 241 DAIYLH 246
Cdd:MTH00175 239 DTIALH 244
|
|
| ATP6 |
MTH00172 |
ATP synthase F0 subunit 6; Provisional |
49-246 |
1.55e-39 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214447 Cd Length: 232 Bit Score: 136.71 E-value: 1.55e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 49 TKLMYNRWGLVMLSMYDTMLNMMKSQMGMRGGYYFPLMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLTM 128
Cdd:MTH00172 38 IKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 129 LGFVNHGLNFFSLFVPTGTPLALVPVLVLIETLSYSSRAISLGLRLSSNILAGHLTMLILGSLILSLMNSSLIgfsLGFI 208
Cdd:MTH00172 118 AGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMLCASGF---LSLF 194
|
170 180 190
....*....|....*....|....*....|....*...
gi 1904806547 209 PIMGVIAIVILEFAISMIQAYVFCITLSGYLKDAIYLH 246
Cdd:MTH00172 195 PLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADTIVLH 232
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
82-240 |
3.85e-33 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 117.50 E-value: 3.85e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 82 YFPLMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLTMLGFVNHGLNFFSLFVPTGTPLALVPVLVLIETL 161
Cdd:cd00310 4 YLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELI 83
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1904806547 162 SYSSRAISLGLRLSSNILAGHLTMLILGSLilslmnSSLIGFSLGFIPIMGVIAIVILEFAISMIQAYVFCITLSGYLK 240
Cdd:cd00310 84 SELIRPLSLSVRLFANMFAGHLLLALLSGL------VPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
54-240 |
1.01e-31 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 115.66 E-value: 1.01e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 54 NRWGLVMLSMYDTMLNMMKSQMGMRGGY-YFPLMFTLFNFMLMANLMSMM---PYTFAMSAQMVFMMSLSLTLWLGLTML 129
Cdd:pfam00119 28 GRLQNFVEMLVEFVDNIVKDNIGKKKGRkFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYY 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 130 GFVNHGLN--FFSLFVPtGTPLALVPVLVLIETLSYSSRAISLGLRLSSNILAGHLTMLILGSLILSLMNsslIGFSLGF 207
Cdd:pfam00119 108 GIKKHGLGgyFKKLFVP-PVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLS---AGFLLGV 183
|
170 180 190
....*....|....*....|....*....|...
gi 1904806547 208 IPIMGVIAIVILEFAISMIQAYVFCITLSGYLK 240
Cdd:pfam00119 184 IPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| ATP6 |
MTH00035 |
ATP synthase F0 subunit 6; Validated |
54-239 |
4.03e-27 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177110 Cd Length: 229 Bit Score: 104.28 E-value: 4.03e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 54 NRWGLVMLSMYDTMLNMMKSQMGMRGGYYFPLMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLTMLGFVN 133
Cdd:MTH00035 44 SRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYL 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 134 HGLNFFSLFVPTGTPLALVPVLVLIETLSYSSRAISLGLRLSSNILAGHLTMLILGSLILSLMNSSLIgfslGFIPIMGV 213
Cdd:MTH00035 124 AFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLRLAANLTAGHLLIFLLSTAIWELSNSPLI----SIITLIIF 199
|
170 180
....*....|....*....|....*.
gi 1904806547 214 IAIVILEFAISMIQAYVFCITLSGYL 239
Cdd:MTH00035 200 FLLFILEIGVACIQAYVFTALVHFYL 225
|
|
| ATP6 |
MTH00174 |
ATP synthase F0 subunit 6; Provisional |
19-246 |
5.39e-27 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 133799 Cd Length: 252 Bit Score: 104.25 E-value: 5.39e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 19 NMYMFSMSNYVLYLMLVSMMMMMYMVSLSKTKLMYNRWGLVMLSMYDTMLNMMKSQMGMRGGYYFPLMFTLFNFMLMANL 98
Cdd:MTH00174 27 NGEFFCFTNTFFMMSFAVFLFYTIGAKGNNNTLVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFVLSLFILILFGNG 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 99 MSMMPYTFAMSAQMVFMMSLSLTLWLGLTMLGFVNHGLNFFSLFVPTGTPLALVPVLVLIETLSYSSRAISLGLRLSSNI 178
Cdd:MTH00174 107 LGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANI 186
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1904806547 179 LAGHLTMLILGSLILSLMNSSLIGFSlgFIPIMGVIAIVILEFAISMIQAYVFCITLSGYLKDAIYLH 246
Cdd:MTH00174 187 SSGHLLFSIIASFAWKMINTGILIGS--FVPFAILIFVTILEMAVAIIQAYVFTLLTIVYLRDTVELH 252
|
|
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
51-238 |
3.75e-26 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 101.40 E-value: 3.75e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 51 LMYNRWGLVMLSMYDTMLNMMKSQMGMRGGYYFPLMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLTMLG 130
Cdd:MTH00157 37 LIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFG 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 131 FVNHGLNFFSLFVPTGTPLALVPVLVLIETLSYSSRAISLGLRLSSNILAGHLTMLILGSLILSLMNSSLIGFslgfipI 210
Cdd:MTH00157 117 WINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLSSMILSIL------I 190
|
170 180
....*....|....*....|....*...
gi 1904806547 211 MGVIAIVILEFAISMIQAYVFCITLSGY 238
Cdd:MTH00157 191 LIQILLLILESAVAIIQSYVFSVLSTLY 218
|
|
| ATP6 |
MTH00179 |
ATP synthase F0 subunit 6; Provisional |
50-239 |
6.88e-26 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177230 Cd Length: 227 Bit Score: 100.79 E-value: 6.88e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 50 KLMYNRWGLVMLSMYDTMLNMMKSQMGMRGGYYFPLMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLTML 129
Cdd:MTH00179 37 RWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLY 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 130 GFVNHGLNFFSLFVPTGTPLALVPVLVLIETLSYSSRAISLGLRLSSNILAGHLTMLILGSLILSLMNSSLIgfsLGFIP 209
Cdd:MTH00179 117 GLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRLTANITAGHLLMHLISSAVFVLMNFMGM---VALLT 193
|
170 180 190
....*....|....*....|....*....|
gi 1904806547 210 IMGVIAIVILEFAISMIQAYVFCITLSGYL 239
Cdd:MTH00179 194 LLVLFLLTLLEVAVAMIQAYVFVLLLSLYL 223
|
|
| ATP6 |
MTH00005 |
ATP synthase F0 subunit 6; Provisional |
84-241 |
8.26e-23 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 164583 Cd Length: 231 Bit Score: 92.87 E-value: 8.26e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 84 PLMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLTMLGFVNHGLNFFSLFVPTGTPLALVPVLVLIETLSY 163
Cdd:MTH00005 75 SLISALFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISI 154
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1904806547 164 SSRAISLGLRLSSNILAGHLTMLILGSLILSLMNSSLIGFSLGFIPIMGVIaivILEFAISMIQAYVFCITLSGYLKD 241
Cdd:MTH00005 155 LVRPITLSFRLAANMSAGHIVLSLIGIYAASALFSSISSTILLILTQMGYI---LFEVGICLIQAYIFCLLLSLYSDD 229
|
|
| ATP6 |
MTH00101 |
ATP synthase F0 subunit 6; Validated |
85-241 |
1.31e-22 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177163 Cd Length: 226 Bit Score: 91.94 E-value: 1.31e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 85 LMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLTMLGFVNHGLNFFSLFVPTGTPLALVPVLVLIETLSYS 164
Cdd:MTH00101 71 MLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLF 150
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1904806547 165 SRAISLGLRLSSNILAGHLTMLILGSLILSLMNSSLIGFSLGFIPImgvIAIVILEFAISMIQAYVFCITLSGYLKD 241
Cdd:MTH00101 151 IQPMALAVRLTANITAGHLLIHLIGGATLALMSISTTTALITFIIL---ILLTILEFAVALIQAYVFTLLVSLYLHD 224
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
48-243 |
3.84e-22 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 90.52 E-value: 3.84e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 48 KTKLMYNRWGLVMLSMYDTMLNMMKSQMGMRGGYYFPLMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLT 127
Cdd:COG0356 23 KLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVH 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 128 MLGFVNHGLNFF--SLFVPTGTPLAlvPVLVLIETLSYSSRAISLGLRLSSNILAGHLTMLILGSLILSlmnssligFSL 205
Cdd:COG0356 103 YYGIKKKGLGGYlkHLFFPPFPWLA--PLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPF--------LLL 172
|
170 180 190
....*....|....*....|....*....|....*...
gi 1904806547 206 GFIPIMGVIAIVILEFAISMIQAYVFCITLSGYLKDAI 243
Cdd:COG0356 173 GVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAV 210
|
|
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
79-239 |
1.01e-21 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 89.93 E-value: 1.01e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 79 GGYYFPLMFT-LFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLTMLGFVNHGLNFFSLFVPTGTPLALVPVLVL 157
Cdd:MTH00132 65 GGHKWALLLTsLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLII 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 158 IETLSYSSRAISLGLRLSSNILAGHLTMLILgslilslmnsSLIGFSLgfIPIMGVIAIV---------ILEFAISMIQA 228
Cdd:MTH00132 145 IETISLFIRPLALGVRLTANLTAGHLLIQLI----------ATAAFVL--LPLMPTVAILtatllflltLLEVAVAMIQA 212
|
170
....*....|.
gi 1904806547 229 YVFCITLSGYL 239
Cdd:MTH00132 213 YVFVLLLSLYL 223
|
|
| PRK05815 |
PRK05815 |
F0F1 ATP synthase subunit A; Validated |
48-246 |
1.91e-21 |
|
F0F1 ATP synthase subunit A; Validated
Pssm-ID: 235617 Cd Length: 227 Bit Score: 89.08 E-value: 1.91e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 48 KTKLMYNRWGLVMLSMYDTMLNMMKSQMGMRGGYYFPLMFTLFNFMLMANLMSMMP-YTFAMSAQMVFMMSLSLTLWLGL 126
Cdd:PRK05815 38 KLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLV 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 127 TMLGFVNHGL-NFFSLFVPTGTPLalvpvLVLIETLSYSSRAISLGLRLSSNILAGHLTMLILGSLILslmnsslIGFSL 205
Cdd:PRK05815 118 IYYGIKKKGLgGYLKEFYLQPHPL-----LLPIEIISEFSRPISLSLRLFGNMLAGELILALIALLGG-------AGLLL 185
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1904806547 206 GFIPIMGVIAIVILEFAISMIQAYVFCITLSGYLKDAIYLH 246
Cdd:PRK05815 186 ALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISMAVEEE 226
|
|
| ATP6 |
MTH00173 |
ATP synthase F0 subunit 6; Provisional |
51-232 |
2.92e-21 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214448 Cd Length: 231 Bit Score: 88.77 E-value: 2.92e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 51 LMYNRWGLVMLSMYDTMLNMMKSQMGMRGGYYFPLMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLTMLG 130
Cdd:MTH00173 40 VSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFLFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSG 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 131 FVNHGLNFFSLFVPTGTPLALVPVLVLIETLSYSSRAISLGLRLSSNILAGHLTMLILGSLILSLMNSSLIGFSLGFIPI 210
Cdd:MTH00173 120 LFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVRLLANISAGHIVLTLIGNYLSSSLFSSSVVSLLLVLLI 199
|
170 180
....*....|....*....|..
gi 1904806547 211 MGViaIVILEFAISMIQAYVFC 232
Cdd:MTH00173 200 QVG--YFIFEVAVMLIQAYIFT 219
|
|
| ATP6 |
MTH00176 |
ATP synthase F0 subunit 6; Provisional |
58-241 |
3.11e-21 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214449 Cd Length: 229 Bit Score: 88.55 E-value: 3.11e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 58 LVMLSMYDTMLNMMKSQMGMRGGYYFPLMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLTMLGFVNHGLN 137
Cdd:MTH00176 47 VFMLMFSTFLPEMILRSNGSYILGSASIIISLFILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYS 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 138 FFSLFVPTGTPLALVPVLVLIETLSYSSRAISLGLRLSSNILAGHLTMLILGSLILSLMNSSLIGFSLGFIPimgVIAIV 217
Cdd:MTH00176 127 RLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLAVRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLIV---QILYF 203
|
170 180
....*....|....*....|....
gi 1904806547 218 ILEFAISMIQAYVFCITLSGYLKD 241
Cdd:MTH00176 204 MFEIAVCMIQAYVFTLLLSLYLDE 227
|
|
| ATP6 |
MTH00120 |
ATP synthase F0 subunit 6; Provisional |
48-239 |
4.62e-21 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177181 Cd Length: 227 Bit Score: 87.96 E-value: 4.62e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 48 KTKLMYNRWGLVMLSMYDTMLNMMKSQMGMRGGYYFPLMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLT 127
Cdd:MTH00120 35 KNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATV 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 128 MLGFVNHGLNFFSLFVPTGTPLALVPVLVLIETLSYSSRAISLGLRLSSNILAGHLTMLILGSLILSLMNSSLigfSLGF 207
Cdd:MTH00120 115 LTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGHLLIQLISTATLNLLPTMP---TLSL 191
|
170 180 190
....*....|....*....|....*....|..
gi 1904806547 208 IPIMGVIAIVILEFAISMIQAYVFCITLSGYL 239
Cdd:MTH00120 192 LTLIILLLLTILELAVAMIQAYVFVLLLSLYL 223
|
|
| ATP6 |
MTH00073 |
ATP synthase F0 subunit 6; Provisional |
80-241 |
2.67e-20 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177144 Cd Length: 227 Bit Score: 85.79 E-value: 2.67e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 80 GYYFPLMFT-LFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLTMLGFVNHGLNFFSLFVPTGTPLALVPVLVLI 158
Cdd:MTH00073 66 GHKWALILTsLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIII 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 159 ETLSYSSRAISLGLRLSSNILAGHLTMLILGSLILSLMNSSLIGFSLGFIPImgvIAIVILEFAISMIQAYVFCITLSGY 238
Cdd:MTH00073 146 ETISLFIRPLALGVRLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVL---FLLTLLEIAVAMIQAYVFVLLLSLY 222
|
...
gi 1904806547 239 LKD 241
Cdd:MTH00073 223 LQE 225
|
|
| PRK13419 |
PRK13419 |
F0F1 ATP synthase subunit A; Provisional |
68-231 |
1.87e-06 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237381 Cd Length: 342 Bit Score: 47.82 E-value: 1.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 68 LNMMKSQMGMRGGYYFPLMFTLFNFMLMANLMSMMPYTFAMSAQMVFMMSLSLTLWLGLTMLGFVNHGLNFFSLFVPTGT 147
Cdd:PRK13419 156 LDVAKSNIGHGYEKFLPYLLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKAHGIKGYLAHLTGGT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 148 PLALVPVLVLIETLSYSSRAISLGLRLSSNILAGHLTMLilgslilslmnsSLIGFSlgFI---PIMGV-------IAIV 217
Cdd:PRK13419 236 HWSLWIIMIPIEFIGLFTKPFALTVRLFANMTAGHIVIL------------SLIFIS--FIlksYIVAVavsvpfaIFIY 301
|
170
....*....|....
gi 1904806547 218 ILEFAISMIQAYVF 231
Cdd:PRK13419 302 LLELFVAFLQAYIF 315
|
|
| ATP6 |
MTH00050 |
ATP synthase F0 subunit 6; Validated |
51-181 |
2.47e-06 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177125 Cd Length: 170 Bit Score: 46.42 E-value: 2.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 51 LMYNRWGLVMLSMYDTMLNMMKSQMgmrggYYFPLMFTLFNFMLManlmsMMPYTFAMSAQMVFMMSLSLTLWLGLTMLG 130
Cdd:MTH00050 1 MFVNDFSSLFSLIYKLILGGSVSYY-----YSVVLFIVLFLFLLY-----RLPYIYSPFLFVVFLFVVVFPLFISLFLSR 70
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1904806547 131 FVNHGLNFFSLFVPTGTPLALVPVLVLIETLSYSSRAISLGLRLSSNILAG 181
Cdd:MTH00050 71 VFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLG 121
|
|
| PRK13417 |
PRK13417 |
F0F1 ATP synthase subunit A; Provisional |
69-246 |
2.49e-05 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237380 Cd Length: 352 Bit Score: 44.50 E-value: 2.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 69 NMMKSQMGMRGGYYFPLMFTLFNFMLMANLMSMMP----------------------------YTFA-------MSAQMV 113
Cdd:PRK13417 144 DIVDESMHGHGHSYYHYIFTLFFFILFCNLMGLVPsvgeltvvasdygglvalgvmdhtphalPTFAkvwsgitVTGDIS 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904806547 114 FMMSLSLTLWLGLTMLGFVNHGLNFFSLFVPTGTPLALVPVLVLIE-TLSYSSRAISLGLRLSSNILAGHLTMLILGSLI 192
Cdd:PRK13417 224 VTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEfIVSPMAKTFALTVRLLANMTAGHVIILALMGFI 303
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1904806547 193 LSLMNSSLIGFSlgfipIMGVIAIVILEFAISMIQAYVFCITLSGYLKDAIYLH 246
Cdd:PRK13417 304 FQFQSWGIVPVS-----VIGSGLIYVLEIFVAFLQAYIFVLLTSLFVGLSMHRH 352
|
|
|