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Conserved domains on  [gi|1901004681|emb|CAD5313537|]
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unnamed protein product [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN02308 PLN02308
endoglucanase
 1-482 0e+00

endoglucanase


:

Pssm-ID: 177943  Cd Length: 492  Bit Score: 1012.52  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681    1 MAGKSFMTPAIMLAMLLLISPETYAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGVDLTGGYYDAG 80
Cdd:PLN02308     1 MAVKSLAAPAIVLLLLLFSPPVIGAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALHDGSSAGVDLTGGYYDAG 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   81 DNVKFGFPMAFTTTMMSWSVIDFGKTMGPELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSDHNCWERPEDMDTLRT 160
Cdd:PLN02308    81 DNVKFGFPMAFTTTLMSWSIIDFGRTMGPELENAVKAVKWATDYLMKATAIPNVVYVQVGDAYSDHNCWERPEDMDTLRT 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  161 VYKIDKDHSGSEVAGETAAALAAASIVFEKRDPVYSKMLLDRATRVFAFAQKYRGAYSDSLYQAVCPFYCDFNGYEDELL 240
Cdd:PLN02308   161 VYKIDPSHPGSDVAGETAAALAAASIVFRKRDPAYSRLLLDRAVRVFAFADKYRGAYSSSLHAAVCPFYCDFNGYQDELL 240

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  241 WGAAWLHKASKKRVYREFIVKNQVILRAGDTIHEFGWDNKHAGINVLISKMVLMGKAEYFQSFKQNADEFICSLLPGISH 320
Cdd:PLN02308   241 WGAAWLHKASRRREYREYIVKNEVILGAGDTINEFGWDNKHAGINVLISKEVLMGKAEYFQSFKQNADGFICSLLPGISH 320

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  321 PQVQYSQGGLLVKSGGSNMQHVTSLSFLLLTYSNYLSHANKVVPCGEFTASPALLRQVAKRQVDYILGDNPMKMSYMVGY 400
Cdd:PLN02308   321 PQVQYSPGGLLFKVGGSNMQHVTSLSFLLLAYSNYLSHANKVVPCGESTASPALLRQVAKRQVDYILGDNPLRMSYMVGY 400

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  401 GSKFPQMIHHRGSSVPSVVDHPDRIGCKDGSRYFLSNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYINAPLLG 480
Cdd:PLN02308   401 GSRFPQRIHHRGSSLPSVAAHPARIGCKEGSRYFLSPNPNPNLLVGAVVGGPNVTDAFPDSRPYFQQSEPTTYINAPLVG 480


                   ..
gi 1901004681  481 LL 482
Cdd:PLN02308   481 LL 482
PLN03058 super family cl03131
dynein light chain type 1 family protein; Provisional
 483-572 1.27e-58

dynein light chain type 1 family protein; Provisional


The actual alignment was detected with superfamily member PLN03058:

Pssm-ID: 470745 [Multi-domain]  Cd Length: 128  Bit Score: 198.30  E-value: 1.27e-58
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  483 EQQDQKDEFNVRVRASDMPLPQQNRAFSLSREILNATPGKADNKRLAHALKKDFDSAYGPAWHCIVGTSFGSYVTHSTGG 562
Cdd:PLN03058    26 EQQDQKDELNVRVRASDMPLVLQNRAFSCARDILDAMPGKLDSKRLALALKKEFDSAYGPAWHCIVGTSFGSYVTHSTGG 105

                           90
                   ....*....|
gi 1901004681  563 FLYFQIDKVY 572
Cdd:PLN03058   106 FLYFSIDKVY 115
Med23 super family cl18592
Mediator complex subunit 23; Med23 is one of the subunits of the Tail portion of the Mediator ...
 1244-1852 1.27e-24

Mediator complex subunit 23; Med23 is one of the subunits of the Tail portion of the Mediator complex that regulates RNA polymerase II activity. Med23 is required for heat-shock-specific gene expression, and has been shown to mediate transcriptional activation of E1A in mice.


The actual alignment was detected with superfamily member pfam11573:

Pssm-ID: 463299  Cd Length: 1301  Bit Score: 113.23  E-value: 1.27e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1244 TPLPMSLLSgfSMNLCLKLALQMEEALFV-------SQVVPSIAMVETYTRLLLISP-HSM----FRSHFSRNASLLSKP 1311
Cdd:pfam11573  523 TPLSMEFLD--SLTVHSKMSLIHSIVTHVikfaqskSSVALAPALVETYSRLLVYTEiESLgikgFISQLLPTVFKSQAW 600

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1312 GVTLLVLEILNYRL---LPLYRYQgksktlmydVTKIISALKGKRGDHR--IFRLAENLCMNLILSLRDFF---SVKREG 1383
Cdd:pfam11573  601 GILHTLLEMFSYRMhhiQPHYRVQ---------LLSHLHSLANVPQTNQtqLHLCVESTALRLITGLGSSEvqpQLSRFL 671

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1384 KGPTEF-----TETLNRITIMTLAITIKTRGiADPDHMVYLQTMLEQILATSQHTWSEKTMRHFPSLLRETLKgrvdKRG 1458
Cdd:pfam11573  672 NEPKTFlvsqeSEELNRALILTLARAIHITG-TGTDSESWCKELLETIMQNTPHGWPQHTLSCFPPWLLEFFK----QNN 746

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1459 LSIQAWQQAETTVINQCTQLLSPSAE-------------------------------PAYARVLREVSPEEVTANIYTLV 1507
Cdd:pfam11573  747 VPKENKQQLKKNVEEEYRKWTSMTNEndiiahfsvpgtpplflcllwkmlletdritPIAYKVLERIGARALSAHLRKFC 826

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1508 DVLLHHVHVDlQQGQSLEAVLDKaganLAFFFWTHEMLPLDIFLLALIDR-DDDPHAL----IIAMSLLKTPDLLLRIKN 1582
Cdd:pfam11573  827 DYLVFEFTNS-CGGQHVNKCADA----LNDMIWKYNIVTIDRLVLCLALRpQEGNEAQvcffIIQLLLLKTTEFRNRVQD 901

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1583 YCQNRgSPEHWLvtqvfKRNELQKALGNHLSWKDRY----------------PTFFDDIAARLLPVIPLVLYRLIENNAM 1646
Cdd:pfam11573  902 FVKEN-SPEHWK-----QPNWHEKHLAYHRKFPEKFapegvaeydsssnpylPTYFGNVCLRFLPVLDIVIHRALELPPV 975

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1647 EQADNLLLAH-SHFLAYHPLRFTFVRDILAYfYGH-------LPGKLVLRMLKVLDLSKIP---FSESFPQYI--SPTGA 1713
Cdd:pfam11573  976 SKSLETLLEHlGCLYKFHDRPVTYLYNTLHY-YEHklrdrpdLKRKLVSAIIGSLKDCRPPgwaLTEAYEKYHqkSSDEQ 1054

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1714 PVCPPLDYFASLLlnlvnnvipplssssncssrsGSMADILNSSARPPHgktPGTSQpgpanasegqkAFYQIQDPGTYT 1793
Cdd:pfam11573 1055 LIWLPEDYYMKLI---------------------DRMVDTMDGKTPPPF---PAKDW-----------RFNEFPNPGAHA 1099

                          650       660       670       680       690       700
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1794 qlvLETAVIEILSLPVSAAQIVSSLVQIIVNIQStLIQSgNGFHGAANGVGQ-GSALPTS 1852
Cdd:pfam11573 1100 ---LYVTCVELMALPVSPETVANALIDVVQKGYH-LIPR-NQIHLWINAIGLiLTALPES 1154
 
Name Accession Description Interval E-value
PLN02308 PLN02308
endoglucanase
 1-482 0e+00

endoglucanase


Pssm-ID: 177943  Cd Length: 492  Bit Score: 1012.52  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681    1 MAGKSFMTPAIMLAMLLLISPETYAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGVDLTGGYYDAG 80
Cdd:PLN02308     1 MAVKSLAAPAIVLLLLLFSPPVIGAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALHDGSSAGVDLTGGYYDAG 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   81 DNVKFGFPMAFTTTMMSWSVIDFGKTMGPELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSDHNCWERPEDMDTLRT 160
Cdd:PLN02308    81 DNVKFGFPMAFTTTLMSWSIIDFGRTMGPELENAVKAVKWATDYLMKATAIPNVVYVQVGDAYSDHNCWERPEDMDTLRT 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  161 VYKIDKDHSGSEVAGETAAALAAASIVFEKRDPVYSKMLLDRATRVFAFAQKYRGAYSDSLYQAVCPFYCDFNGYEDELL 240
Cdd:PLN02308   161 VYKIDPSHPGSDVAGETAAALAAASIVFRKRDPAYSRLLLDRAVRVFAFADKYRGAYSSSLHAAVCPFYCDFNGYQDELL 240

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  241 WGAAWLHKASKKRVYREFIVKNQVILRAGDTIHEFGWDNKHAGINVLISKMVLMGKAEYFQSFKQNADEFICSLLPGISH 320
Cdd:PLN02308   241 WGAAWLHKASRRREYREYIVKNEVILGAGDTINEFGWDNKHAGINVLISKEVLMGKAEYFQSFKQNADGFICSLLPGISH 320

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  321 PQVQYSQGGLLVKSGGSNMQHVTSLSFLLLTYSNYLSHANKVVPCGEFTASPALLRQVAKRQVDYILGDNPMKMSYMVGY 400
Cdd:PLN02308   321 PQVQYSPGGLLFKVGGSNMQHVTSLSFLLLAYSNYLSHANKVVPCGESTASPALLRQVAKRQVDYILGDNPLRMSYMVGY 400

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  401 GSKFPQMIHHRGSSVPSVVDHPDRIGCKDGSRYFLSNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYINAPLLG 480
Cdd:PLN02308   401 GSRFPQRIHHRGSSLPSVAAHPARIGCKEGSRYFLSPNPNPNLLVGAVVGGPNVTDAFPDSRPYFQQSEPTTYINAPLVG 480


                   ..
gi 1901004681  481 LL 482
Cdd:PLN02308   481 LL 482
Glyco_hydro_9 pfam00759
Glycosyl hydrolase family 9;
31-482 6.51e-155

Glycosyl hydrolase family 9;


Pssm-ID: 459928 [Multi-domain]  Cd Length: 376  Bit Score: 482.86  E-value: 6.51e-155
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   31 DALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGS------SAGVDLTGGYYDAGDNVKFGFPMAFTTTMMSWSVIDFG 104
Cdd:pfam00759    1 EALQKSLLFFYAQRSGKLPDNNRVAWRGDSHLDDGAaalsgdDGGVDLSGGWYDAGDYVKFGVPMAFTVTMLLWAYEEFP 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  105 KTMG--PELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSDHNCWERPEDMDTLRTVYKIDKDHSGSEVAGETAAALA 182
Cdd:pfam00759   81 DAYKaaGDLDHILDELKWGLDYLLKMHPSDGVLYVQVGDGDADHKCWGPPEDMTTPRPVYKIDASNPGTDAAAETAAALA 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  183 AASIVFEKRDPVYSKMLLDRATRVFAFAQKYRGaYSDSLYQAVCPFYCDfNGYEDELLWGAAWLHKASKKRVYREFIVKN 262
Cdd:pfam00759  161 AASRVFKKSDPAYAAKLLAAAKQLYAFADTYRG-YSDSIPAVGGGFYNS-SGYEDELLWAAAWLYKATGDSSYLDYAESY 238

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  263 ---QVILRAGDTIHEFGWDNKHAGinvliskmvlmgkaeyfqsfkqnadeficsllpgishpqvqysqggllvksggsnm 339
Cdd:pfam00759  239 ysaLGGTAFSSTGWGFSWDNKVAG-------------------------------------------------------- 262

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  340 qHVTSLSFLLLTYSNYLSHANKvvpcgeftaspalLRQVAKRQVDYILGDNPMKMSYMVGYGSKFPQMIHHRGSSVPSVV 419
Cdd:pfam00759  263 -YAANAAFLLLVYADLLGDPSK-------------YRDFAKSQIDYLLGDNPLGMSYVVGYGENSPKNPHHRAASGSSRD 328

                          410       420       430       440       450       460
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1901004681  420 DhpdrigckdgsryflSNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYINAPLLGLL 482
Cdd:pfam00759  329 A---------------SPAPNPNPLPGALVGGPNPDDSYVDDRNDYSTNEVAIDYNAPLVGAL 376
PLN03058 PLN03058
dynein light chain type 1 family protein; Provisional
 483-572 1.27e-58

dynein light chain type 1 family protein; Provisional


Pssm-ID: 166697 [Multi-domain]  Cd Length: 128  Bit Score: 198.30  E-value: 1.27e-58
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  483 EQQDQKDEFNVRVRASDMPLPQQNRAFSLSREILNATPGKADNKRLAHALKKDFDSAYGPAWHCIVGTSFGSYVTHSTGG 562
Cdd:PLN03058    26 EQQDQKDELNVRVRASDMPLVLQNRAFSCARDILDAMPGKLDSKRLALALKKEFDSAYGPAWHCIVGTSFGSYVTHSTGG 105

                           90
                   ....*....|
gi 1901004681  563 FLYFQIDKVY 572
Cdd:PLN03058   106 FLYFSIDKVY 115
DLC-like_DYNLL1_DYNLL2 cd21452
dynein light chain (DLC)-like domain found in the cytoplasmic dynein light chain 1 (DYNLL1) ...
 492-571 1.92e-29

dynein light chain (DLC)-like domain found in the cytoplasmic dynein light chain 1 (DYNLL1) family; The cytoplasmic dynein light chain 1 (DYNLL1) family includes DYNLL1 and DYNLL2. DYNLL1, also called protein inhibitor of neuronal nitric oxide synthase (PIN), or 8 kDa dynein light chain (DLC8), or dynein light chain LC8-type 1 (DLC1), acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. It may play a role in changing or maintaining the spatial distribution of cytoskeletal structures. Both DYNLL1 and DYNLL2 (also called 8 kDa dynein light chain b, or DLC8b, or dynein light chain LC8-type 2, or DLC2) are non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. The model corresponds to the dynein light chain (DLC)-like domain of DYNLL1 and DYNLL2.


Pssm-ID: 412000  Cd Length: 84  Bit Score: 112.97  E-value: 1.92e-29
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  492 NVRVRASDMPLPQQNRAFSLSREILNATPGkadNKRLAHALKKDFDSAYGPAWHCIVGTSFGSYVTHSTGGFLYFQIDKV 571
Cdd:cd21452      1 KAVIKNADMPEEMQQDAIELATQALEKYNI---EKDIAAYIKKEFDKKYGPTWHCIVGRNFGSYVTHETKHFIYFYIGQV 77
Dynein_light pfam01221
Dynein light chain type 1;
492-572 2.84e-26

Dynein light chain type 1;


Pssm-ID: 460119  Cd Length: 83  Bit Score: 104.15  E-value: 2.84e-26
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  492 NVRVRASDMPLPQQNRAFSLSREILNATPgkaDNKRLAHALKKDFDSAYGPAWHCIVGTSFGSYVTHSTGGFLYFQIDKV 571
Cdd:pfam01221    1 KAVIKASDMPEEMQQEAIEIAQEALEKYN---IEKDIAAYIKKEFDKKYGPTWHCIVGKNFGSYVTHETGHFIYFYIGNL 77


                   .
gi 1901004681  572 Y 572
Cdd:pfam01221   78 A 78
Med23 pfam11573
Mediator complex subunit 23; Med23 is one of the subunits of the Tail portion of the Mediator ...
 1244-1852 1.27e-24

Mediator complex subunit 23; Med23 is one of the subunits of the Tail portion of the Mediator complex that regulates RNA polymerase II activity. Med23 is required for heat-shock-specific gene expression, and has been shown to mediate transcriptional activation of E1A in mice.


Pssm-ID: 463299  Cd Length: 1301  Bit Score: 113.23  E-value: 1.27e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1244 TPLPMSLLSgfSMNLCLKLALQMEEALFV-------SQVVPSIAMVETYTRLLLISP-HSM----FRSHFSRNASLLSKP 1311
Cdd:pfam11573  523 TPLSMEFLD--SLTVHSKMSLIHSIVTHVikfaqskSSVALAPALVETYSRLLVYTEiESLgikgFISQLLPTVFKSQAW 600

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1312 GVTLLVLEILNYRL---LPLYRYQgksktlmydVTKIISALKGKRGDHR--IFRLAENLCMNLILSLRDFF---SVKREG 1383
Cdd:pfam11573  601 GILHTLLEMFSYRMhhiQPHYRVQ---------LLSHLHSLANVPQTNQtqLHLCVESTALRLITGLGSSEvqpQLSRFL 671

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1384 KGPTEF-----TETLNRITIMTLAITIKTRGiADPDHMVYLQTMLEQILATSQHTWSEKTMRHFPSLLRETLKgrvdKRG 1458
Cdd:pfam11573  672 NEPKTFlvsqeSEELNRALILTLARAIHITG-TGTDSESWCKELLETIMQNTPHGWPQHTLSCFPPWLLEFFK----QNN 746

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1459 LSIQAWQQAETTVINQCTQLLSPSAE-------------------------------PAYARVLREVSPEEVTANIYTLV 1507
Cdd:pfam11573  747 VPKENKQQLKKNVEEEYRKWTSMTNEndiiahfsvpgtpplflcllwkmlletdritPIAYKVLERIGARALSAHLRKFC 826

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1508 DVLLHHVHVDlQQGQSLEAVLDKaganLAFFFWTHEMLPLDIFLLALIDR-DDDPHAL----IIAMSLLKTPDLLLRIKN 1582
Cdd:pfam11573  827 DYLVFEFTNS-CGGQHVNKCADA----LNDMIWKYNIVTIDRLVLCLALRpQEGNEAQvcffIIQLLLLKTTEFRNRVQD 901

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1583 YCQNRgSPEHWLvtqvfKRNELQKALGNHLSWKDRY----------------PTFFDDIAARLLPVIPLVLYRLIENNAM 1646
Cdd:pfam11573  902 FVKEN-SPEHWK-----QPNWHEKHLAYHRKFPEKFapegvaeydsssnpylPTYFGNVCLRFLPVLDIVIHRALELPPV 975

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1647 EQADNLLLAH-SHFLAYHPLRFTFVRDILAYfYGH-------LPGKLVLRMLKVLDLSKIP---FSESFPQYI--SPTGA 1713
Cdd:pfam11573  976 SKSLETLLEHlGCLYKFHDRPVTYLYNTLHY-YEHklrdrpdLKRKLVSAIIGSLKDCRPPgwaLTEAYEKYHqkSSDEQ 1054

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1714 PVCPPLDYFASLLlnlvnnvipplssssncssrsGSMADILNSSARPPHgktPGTSQpgpanasegqkAFYQIQDPGTYT 1793
Cdd:pfam11573 1055 LIWLPEDYYMKLI---------------------DRMVDTMDGKTPPPF---PAKDW-----------RFNEFPNPGAHA 1099

                          650       660       670       680       690       700
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1794 qlvLETAVIEILSLPVSAAQIVSSLVQIIVNIQStLIQSgNGFHGAANGVGQ-GSALPTS 1852
Cdd:pfam11573 1100 ---LYVTCVELMALPVSPETVANALIDVVQKGYH-LIPR-NQIHLWINAIGLiLTALPES 1154
 
Name Accession Description Interval E-value
PLN02308 PLN02308
endoglucanase
 1-482 0e+00

endoglucanase


Pssm-ID: 177943  Cd Length: 492  Bit Score: 1012.52  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681    1 MAGKSFMTPAIMLAMLLLISPETYAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGVDLTGGYYDAG 80
Cdd:PLN02308     1 MAVKSLAAPAIVLLLLLFSPPVIGAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALHDGSSAGVDLTGGYYDAG 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   81 DNVKFGFPMAFTTTMMSWSVIDFGKTMGPELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSDHNCWERPEDMDTLRT 160
Cdd:PLN02308    81 DNVKFGFPMAFTTTLMSWSIIDFGRTMGPELENAVKAVKWATDYLMKATAIPNVVYVQVGDAYSDHNCWERPEDMDTLRT 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  161 VYKIDKDHSGSEVAGETAAALAAASIVFEKRDPVYSKMLLDRATRVFAFAQKYRGAYSDSLYQAVCPFYCDFNGYEDELL 240
Cdd:PLN02308   161 VYKIDPSHPGSDVAGETAAALAAASIVFRKRDPAYSRLLLDRAVRVFAFADKYRGAYSSSLHAAVCPFYCDFNGYQDELL 240

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  241 WGAAWLHKASKKRVYREFIVKNQVILRAGDTIHEFGWDNKHAGINVLISKMVLMGKAEYFQSFKQNADEFICSLLPGISH 320
Cdd:PLN02308   241 WGAAWLHKASRRREYREYIVKNEVILGAGDTINEFGWDNKHAGINVLISKEVLMGKAEYFQSFKQNADGFICSLLPGISH 320

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  321 PQVQYSQGGLLVKSGGSNMQHVTSLSFLLLTYSNYLSHANKVVPCGEFTASPALLRQVAKRQVDYILGDNPMKMSYMVGY 400
Cdd:PLN02308   321 PQVQYSPGGLLFKVGGSNMQHVTSLSFLLLAYSNYLSHANKVVPCGESTASPALLRQVAKRQVDYILGDNPLRMSYMVGY 400

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  401 GSKFPQMIHHRGSSVPSVVDHPDRIGCKDGSRYFLSNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYINAPLLG 480
Cdd:PLN02308   401 GSRFPQRIHHRGSSLPSVAAHPARIGCKEGSRYFLSPNPNPNLLVGAVVGGPNVTDAFPDSRPYFQQSEPTTYINAPLVG 480


                   ..
gi 1901004681  481 LL 482
Cdd:PLN02308   481 LL 482
PLN02266 PLN02266
endoglucanase
 24-482 0e+00

endoglucanase


Pssm-ID: 215150  Cd Length: 510  Bit Score: 724.75  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   24 YAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGVDLTGGYYDAGDNVKFGFPMAFTTTMMSWSVIDF 103
Cdd:PLN02266    42 LASHNYRDALTKSILFFEGQRSGKLPSSQRMTWRRDSGLSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEF 121

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  104 GKTMGPELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSDHNCWERPEDMDTLRTVYKIDKDHSGSEVAGETAAALAA 183
Cdd:PLN02266   122 GGLMKSELQNAKDAIRWATDYLLKATAHPDTIYVQVGDANKDHACWERPEDMDTPRSVFKVDKNTPGSDVAAETAAALAA 201

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  184 ASIVFEKRDPVYSKMLLDRATRVFAFAQKYRGAYSDSLYQAVCPFYCDFNGYEDELLWGAAWLHKASKKRVYREFIVKNQ 263
Cdd:PLN02266   202 ASLVFRKSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKPDVCPFYCSYSGYQDELLWGAAWLHKATKNPTYLNYIQVNG 281

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  264 VILRAGDTIHEFGWDNKHAGINVLISKMVLMGKAEYFQSFKQNADEFICSLLPGISHPQVQYSQGGLLVKSGGSNMQHVT 343
Cdd:PLN02266   282 QILGADEFDNTFGWDNKHVGARILLSKAFLVQKVQSLHEYKGHADNFICSVIPGAPFSSTQYTPGGLLFKMSDSNMQYVT 361

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  344 SLSFLLLTYSNYLSHANKVVPCGEFTASPALLRQVAKRQVDYILGDNPMKMSYMVGYGSKFPQMIHHRGSSVPSVVDHPD 423
Cdd:PLN02266   362 STSFLLLTYAKYLTSAKTVVNCGGTVVTPARLRSIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHHRGSSLPSVAAHPA 441

                          410       420       430       440       450
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1901004681  424 RIGCKDGSRYFLSNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYINAPLLGLL 482
Cdd:PLN02266   442 KIQCSQGFSIMNSQSPNPNVLVGAVVGGPDQHDRFPDERSDYEQSEPATYINAPLVGAL 500
PLN03009 PLN03009
cellulase
 11-482 0e+00

cellulase


Pssm-ID: 166650  Cd Length: 495  Bit Score: 680.17  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   11 IMLAMLLLISPE-TYAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGVDLTGGYYDAGDNVKFGFPM 89
Cdd:PLN03009    10 VFLFFLILRRPTmESNQHDYSDALSKSILFFEGQRSGYLPNDQRMTWRANSGLSDGWTHNTDLTGGYYDAGDNVKFGFPM 89

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   90 AFTTTMMSWSVIDFGKTMGP-ELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSDHNCWERPEDMDTLRTVYKIDKDH 168
Cdd:PLN03009    90 AFTTTMLAWSVIEFGDLMPSsELRNSLVAIRWATDYLLKTVSQPNRIFVQVGDPIADHNCWERPEDMDTPRTVYAVNAPN 169

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  169 SGSEVAGETAAALAAASIVFEKRDPVYSKMLLDRATRVFAFAQKYRGAYSDS--LYQAVCPFYCDFNGYEDELLWGAAWL 246
Cdd:PLN03009   170 PASDVAGETAAALAASSMAFRSSDPGYSETLLRNAIKTFQFADMYRGAYSDNddIKDGVCPFYCDFDGYQDELLWGAAWL 249

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  247 HKASKKRVYREFIVKNQVILRAGDTIHEFGWDNKHAGINVLISKMVLMGKAEYFQSFKQNADEFICSLLPGISHPQVQYS 326
Cdd:PLN03009   250 RRASGDDSYLNYIENNGETLGANDNINEFGWDNKHAGLNVLVSKEVLEGNMYSLQSYKASADSFMCTLIPESSSSHVEYT 329

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  327 QGGLLVKSGGSNMQHVTSLSFLLLTYSNYLSHANKVVPCGEFTASPALLRQVAKRQVDYILGDNPMKMSYMVGYGSKFPQ 406
Cdd:PLN03009   330 PGGLIYKPGGSNLQHATTISFLLLVYANYLSRSSQSVNCGNLTIGPDSLRQQAKRQVDYILGDNPMGLSYMVGYSERYPQ 409

                          410       420       430       440       450       460       470
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1901004681  407 MIHHRGSSVPSVVDHPDRIGCKDGSRYFLSNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYINAPLLGLL 482
Cdd:PLN03009   410 RIHHRGSSLPSIKDHPEAIACKEGSVYFNSSNPNPNVLVGAVVGGPGEDDSYEDDRDDFRKSEPTTYINAPFVGVL 485
PLN02171 PLN02171
endoglucanase
 11-482 0e+00

endoglucanase


Pssm-ID: 215115 [Multi-domain]  Cd Length: 629  Bit Score: 582.14  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   11 IMLAMLLLISPETYAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGVDLTGGYYDAGDNVKFGFPMA 90
Cdd:PLN02171    13 LLLAAAQLCFPVAFGGHDYGQALSKSILFFEAQRSGVLPPNQRVTWRANSGLFDGKASGVDLVGGYYDAGDNVKFGLPMA 92

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   91 FTTTMMSWSVIDFGKTMGP--ELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSDHNCWERPEDMDTLRTVYKIDKDH 168
Cdd:PLN02171    93 FTVTMMSWSIIEYGKQMAAagELGHAMDAVKWGTDYFIKAHPEPNVLYGEVGDGDTDHYCWQRPEDMTTDRQAYRIDPQN 172

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  169 SGSEVAGETAAALAAASIVFEKRDPVYSKMLLDRATRVFAFAQKYRGAYSDSLYQAVcPFYCDFNGYEDELLWGAAWLHK 248
Cdd:PLN02171   173 PGSDLAGETAAAMAAASIVFRRSNPGYANELLTHAKQLFDFADKYRGKYDSSITVAQ-KYYRSVSGYGDELLWAAAWLYQ 251

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  249 ASKKRVYREFIVKN-QVILRAGDTIHEFGWDNKHAGINVLISKMVLMGK----AEYFQSFKQNADEFICSLLpGISHPQV 323
Cdd:PLN02171   252 ATNNQYYLDYLGNNgDALGGTGWSMTEFGWDVKYAGVQVLVAKFLMQGKagehAAVFQRYQQKAEFFMCSCL-GKGARNV 330

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  324 QYSQGGLLVKSGGSNMQHVTSLSFLLLTYSNYLSHANKVVPCGEFTASPALLRQVAKRQVDYILGDNPMKMSYMVGYGSK 403
Cdd:PLN02171   331 QKTPGGLIYRQRWNNMQFVTSASFLLTVYSDYLASSGRALRCAAGNAAPSQLLAFAKSQVDYILGDNPRATSYMVGYGAN 410

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  404 FPQMIHHRGSSVPSVVDHPDRIGCKDG-SRYFLSNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYINAPLLGLL 482
Cdd:PLN02171   411 YPRQVHHRGSSIVSIKVDPSFVSCRGGyATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLGVL 490
PLN02613 PLN02613
endoglucanase
 10-490 0e+00

endoglucanase


Pssm-ID: 215331  Cd Length: 498  Bit Score: 577.64  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   10 AIMLAMLLLISPETYAG---HDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGVDLTGGYYDAGDNVKFG 86
Cdd:PLN02613     5 LVLMLVGMFLAFESLVAlesPDYGDALNKSILFFEGQRSGKLPTNQRVKWRADSALSDGKPENVNLTGGYYDAGDNVKFG 84

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   87 FPMAFTTTMMSWSVIDFGKTMGP--ELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSDHNCWERPEDMDTLRTVYKI 164
Cdd:PLN02613    85 WPMAFTVTLLSWAAIEYQNEISSvnQLGYLRSAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYKI 164

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  165 DKDHSGSEVAGETAAALAAASIVFEKRDPVYSKMLLDRATRVFAFAQKYRGAYSDSlyqavCPFYCDFNGYEDELLWGAA 244
Cdd:PLN02613   165 TSSSPGSEAAGEAAAALAAASLVFKDVDSSYSSKLLNHARSLFEFADKYRGSYQAS-----CPFYCSYSGYQDELLWAAA 239

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  245 WLHKASKKRVYREFIVKNQvilRAGDTIHEFGWDNKHAGINVLISKMVLMGKAEyFQSFKQNADEFICSLLPGISHPQVQ 324
Cdd:PLN02613   240 WLYKATGEKKYLNYVISNK---GWSQAVNEFSWDNKFAGAQALLASEFYGGAND-LAKFKTDVESFVCALMPGSSSVQIK 315

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  325 YSQGGLLVKSGGSNMQHVTSLSFLLLTYSNYLSHAN-KVVPCGEFTASPALLRQVAKRQVDYILGDNPMKMSYMVGYGSK 403
Cdd:PLN02613   316 TTPGGLLFTRDSSNLQYVTTATTVLFIYSKTLTKAGvGGIQCGSAQFSASQIRNFAKSQVDYILGNNPMKMSYMVGFGTK 395

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  404 FPQMIHHRGSSVPSVVDHPDRIGCKDG-SRYFLSNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYINAPLLG-- 480
Cdd:PLN02613   396 YPTQIHHRGSSIPSIQVLPEKVDCNGGfSSYYNSDTPNPNVHVGAIVGGPDSNDQYSDKRSDYSHAEPTTYINAAFVGsv 475

                          490
                   ....*....|..
gi 1901004681  481 --LLEQQDQKDE 490
Cdd:PLN02613   476 aaLIKQVSRLEE 487
PLN02175 PLN02175
endoglucanase
 11-482 2.16e-173

endoglucanase


Pssm-ID: 177832  Cd Length: 484  Bit Score: 538.53  E-value: 2.16e-173
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   11 IMLAMLLLISpETYAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGVDLTGGYYDAGDNVKFGFPMA 90
Cdd:PLN02175     8 VFLFSSLLIE-NTDANPNYKEALSKSLLFFQGQRSGPLPRGQQLSWRASSGLSDGSAAHVDLTGGYYDAGDNVKFNFPMA 86

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   91 FTTTMMSWSVIDFGKTMGPELENAVKAIKWGTDYLMK-ATQIPDVVFVQVGDAYSDHNCWERPEDMDTLRTVYKIDKDHS 169
Cdd:PLN02175    87 FTTTMLSWSALEYGKRMGPELENARVNIRWATDYLLKcARATPGKLYVGVGDPNVDHKCWERPEDMDTPRTVYSVSPSNP 166

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  170 GSEVAGETAAALAAASIVFEKRDPVYSKMLLDRATRVFAFAQKYRGAYSDSLYQAVCPFYCDFNGYEDELLWGAAWLHKA 249
Cdd:PLN02175   167 GSDVAAETAAALAAASMVFRKVDSKYSRLLLATAKKVMQFAIQYRGAYSDSLSSSVCPFYCSYSGYKDELMWGASWLLRA 246

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  250 SKKRVYREFIVKnqviLRAGDTIHEFGWDNKHAGINVLISKMVLMGKAEYFQSFKQNADEFICSLLPGISHPQVQYSQGG 329
Cdd:PLN02175   247 TNDPYYANFIKS----LGGGDQPDIFSWDNKYAGAYVLLSRRALLNKDSNFEQYKQAAENFICKILPDSPSSSTQYTQGG 322

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  330 LLVKSGGSNMQHVTSLSFLLLTYSNYLSHANKVVPCGEFTASPALLRQVAKRQVDYILGDNPMKMSYMVGYGSKFPQMIH 409
Cdd:PLN02175   323 LMYKLPQSNLQYVTSITFLLTTYAKYMKSTKHTFNCGNSVIVPNALISLSKRQVDYILGDNPIKMSYMVGFSSNFPKRIH 402

                          410       420       430       440       450       460       470
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1901004681  410 HRGSSVPSVVDHPDRIGCKDGSRYFLSNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYINAPLLGLL 482
Cdd:PLN02175   403 HRASSLPSHALRSNSLGCNGGFQSFYTQNPNPNILTGAIVGGPNQNDGYPDQRDDYSHAEPATYINAAFVGPL 475
PLN02340 PLN02340
endoglucanase
 1-481 7.66e-168

endoglucanase


Pssm-ID: 215194 [Multi-domain]  Cd Length: 614  Bit Score: 528.28  E-value: 7.66e-168
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681    1 MAGKSFMTPAIMLAMLLLISPETYAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGVDLTGGYYDAG 80
Cdd:PLN02340     3 KTSLSLGGAALLLLVLAAAASAAAEAFNYGGALDKTLLFFEAQRSGKLPANQRVKWRGDSGLKDGFLQGVDLVGGYYDAG 82

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   81 DNVKFGFPMAFTTTMMSWSVIDFGKTM--GPELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSDHNCWERPEDMDTL 158
Cdd:PLN02340    83 DHVKFGLPMAFAVTMLSWGAVDFRKEItaLNQMQRTLWAIRWGTDYFIKAHTQPNVLWGQVGDGDSDHYCWERAEDMTTP 162

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  159 RTVYKIDKDHSGSEVAGETAAALAAASIVFEKRDPVYSKMLLDRATRVFAFAQKYRGAYSDSLyQAVCPFYCDfNGYEDE 238
Cdd:PLN02340   163 RTAYKLDQNHPGSDLAGETAAALAAASKAFKPYNSSYSDLLLVHAKQLFSFADKFRGLYDDSI-QNAKKFYTS-SGYSDE 240

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  239 LLWGAAWLHKASKKRVYREFIVKNQVILRA-GDTIHEFGWDNKHAGINVLISKMVLMGK-AEYFQSFKQ---NADEFICS 313
Cdd:PLN02340   241 LLWAAAWLYRATGDEYYLKYVVDNAVYMGGtGWAVKEFSWDNKYAGVQILLSKILLEGRgGAYTSTLKQyqaKADYFACA 320

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  314 LLPGISHPQVQYSQGGLLVKSGGSNMQHVTSLSFLLLTYSNYLSHANKVVPCGEFTASPALLRQVAKRQVDYILGDNPMK 393
Cdd:PLN02340   321 CLQKNGGYNIQLTPGGLMYVREWNNLQYASSAAFLLAVYSDYLSAANAKLRCPDGLVQPQELLDFARSQADYILGKNPKG 400

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  394 MSYMVGYGSKFPQMIHHRGSSVPSVVDHPDRIGCKDG-SRYFLSNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTT 472
Cdd:PLN02340   401 MSYMVGYGPKYPIHVHHRGSSIPSIFALHSTVGCVQGfDSWYRRKEADPNVIYGALVGGPDANDNFSDDRSNYEQTEPTL 480


                   ....*....
gi 1901004681  473 YINAPLLGL 481
Cdd:PLN02340   481 SGNAPLVGL 489
PLN00119 PLN00119
endoglucanase
 1-482 1.69e-165

endoglucanase


Pssm-ID: 177732  Cd Length: 489  Bit Score: 517.15  E-value: 1.69e-165
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681    1 MAGKSFMTPAIMLAMLLLISPETYAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGVDLTGGYYDAG 80
Cdd:PLN00119     4 GSSQCLWTLSICIVLLVMSMARGAVSTNYGEALTKSLLYFEAQRSGKLPSNQRVTWRGDSALRDGSDAHVDLTGGYYDAG 83

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   81 DNVKFGFPMAFTTTMMSWSVIDFGKTMGP--ELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSDHNCWERPEDMDTL 158
Cdd:PLN00119    84 DNMKFGFPLAFTTTMLAWSNIEMGSQLKAhhELGNALAALKWATDYLIKAHPQPNVLYGQVGDGNSDHACWMRPEDMTTP 163

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  159 RTVYKIDKDHSGSEVAGETAAALAAASIVFEKRDPVYSKMLLDRATRVFAFAQKYRGAYSDSLYQAvCPFYCDfNGYEDE 238
Cdd:PLN00119   164 RTSYRIDAQHPGSDLAGETAAAMAAASIAFAPSDPAYASILIGHAKDLFEFAKAHPGLYQNSIPNA-GGFYAS-SGYEDE 241

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  239 LLWGAAWLHKASKKRVYREFIVKNQvilRAGDTIHEFGWDNKHAGINVLISKMVLMGKAE---YFQSFKQNADEFICSLL 315
Cdd:PLN00119   242 LLWAAAWLHRATNDQTYLDYLTQAS---NTGGPRTVFAWDDKFVGAQVLVAKLALEGKVEsngKIVEYKSMAEQFICNCA 318

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  316 PGISHpQVQYSQGGLLVKSGGSNMQHVTSLSFLLLTYSNYLSHANKVVPCGEFTASPALLRQVAKRQVDYILGDNPMKMS 395
Cdd:PLN00119   319 QKGSN-NVKKTPGGLLWFLPWNNLQYTTAASFVLSAYSKYLEAAKASIQCPNGALQASDLLQLARSQVDYILGSNPKNMS 397

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  396 YMVGYGSKFPQMIHHRGSSVPSVVDHPDRIGCKDG-SRYFLSNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYI 474
Cdd:PLN00119   398 YMVGYGTNYPKKPHHRGASIVSIKKDKTPVTCSGGfDAWYNNPAPNPNVLMGAIVGGPDDNDVYGDERSNFQQAEPATVT 477


                   ....*...
gi 1901004681  475 NAPLLGLL 482
Cdd:PLN00119   478 VAPFVGVL 485
PLN02420 PLN02420
endoglucanase
 7-498 5.09e-159

endoglucanase


Pssm-ID: 178040  Cd Length: 525  Bit Score: 500.71  E-value: 5.09e-159
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681    7 MTPAIMLAMLLLISPETYAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGVDLTGGYYDAGDNVKFG 86
Cdd:PLN02420    20 LITVFSAALAGVSSETDVGRFDYGEALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYHDAGDHVKFG 99

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   87 FPMAFTTTMMSWSVIDFGKTMGP--ELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSDHNCWERPEDMDTLRTVYKI 164
Cdd:PLN02420   100 LPMAFTVTMLSWSVIEYGDQLAStgELSHALEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRRAFKI 179

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  165 DKDHSGSEVAGETAAALAAASIVFEKRDPVYSKMLLDRATRVFAFAQKYRGAYSDSLyQAVCPFYCDFNGYEDELLWGAA 244
Cdd:PLN02420   180 DENNPGSDIAGETAAAMAAASIVFRSTNPHYSHLLLHHAQQLFEFGDKYRGKYDESL-KVVKSYYASVSGYMDELLWGAT 258

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  245 WLHKASKKRVYREFIVKNQVILRA-GDTIHEFGWDNKHAGINVLISKMVLMGK----AEYFQSFKQNADEFICSLL-PGI 318
Cdd:PLN02420   259 WLYRATDNEHYMSYVVDMAHQLGGlSWAMSEFSWDVKYAGVQLLASMLLKEEKhkqhSKVLQQYKSKADHYLCSILnKNI 338

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  319 SHPQVQYSQGGLLVKSGGSNMQHVTSLSFLLLTYSNYLSHANKVVPCGEFTASPALLRQVAKRQVDYILGDNPMKMSYMV 398
Cdd:PLN02420   339 NGTNVQRTPAGLLYVRQWNNMQYVSTASFLLTVYSDHLRKSNTDLECHEGTVTPDEMLGFAKSQIDYILGSNPMETSYLV 418

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  399 GYGSKFPQMIHHRGSSVPSVVDHPDRIGCKDG-SRYFLSNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYINAP 477
Cdd:PLN02420   419 GYGPKYPTRVHHRGASIASFKEHKGFIGCTQGyDNWYGRSEPNPSVLVGALVGGPDCQDNFDDRRGNYVQTEACTYNTAP 498

                          490       500
                   ....*....|....*....|....*.
gi 1901004681  478 LLG----LLEQQDQK-DEFNVRVRAS 498
Cdd:PLN02420   499 LVGvfarLIELEEQKlEEEDVSLVAT 524
PLN02909 PLN02909
Endoglucanase
 10-482 2.12e-158

Endoglucanase


Pssm-ID: 178497  Cd Length: 486  Bit Score: 497.09  E-value: 2.12e-158
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   10 AIMLAMLLLISPETYAG--------HDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGVDLTGGYYDAGD 81
Cdd:PLN02909     8 ANVLAALTLLGLYGIPSlvvavgthFNYKDALTKSIIFLEAQRSGKLPPNNRVPWRGDSALDDGKLANVDLVGGYYDAGD 87

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   82 NVKFGFPMAFTTTMMSWSVIDFGKTMGP--ELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSDHNCWERPEDMDTLR 159
Cdd:PLN02909    88 NVKYGLPMAFTVTTLAWSTLAYEKELRAtgELENVRAAIRWGTDYFLKAASRKNRLYVQVGDPNLDHQCWVRPENMKTPR 167

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  160 TVYKIDKDHSGSEVAGETAAALAAASIVFEKRDPVYSKMLLDRATRVFAFAQKYRGAYSDSlyqavCPFYCDFNGYEDEL 239
Cdd:PLN02909   168 TVLEIDEKTPGTEIAAETAAAMAASSMVFRHVDHKYSRRLLNKAKLLFKFAKAHKGTYDGE-----CPFYCSYSGYNDEL 242

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  240 LWGAAWLHKASKKRVYREFIvKNQVIlraGDTIHEFGWDNKHAGINVLISKMVLMGKAEyFQSFKQNADEFICSLLPGIS 319
Cdd:PLN02909   243 LWAATWLYKATKKQMYLKYI-KHEAI---SASVAEFSWDLKYAGAQVLLSKLNFEGEKG-LQSYKQQADSFVCSVLPGSP 317

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  320 HPQVQYSQGGLLVKSGGSNMQHVTSLSFLLLTYSNYLSHANKVVPCGEFTASPALLRQVAKRQVDYILGDNPMKMSYMVG 399
Cdd:PLN02909   318 FHQVFITPGGMIHLRDGANSQYVTSTAFLFSVYSDILRRHNQKVMCGNQQFDSTRLMAFAKQQIDYLLGANPQGRSYMVG 397

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  400 YGSKFPQMIHHRGSSVPsVVDHPDRIGCKDG-SRYFLSNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYINAPL 478
Cdd:PLN02909   398 FGPNPPKQPHHRGASVP-VLPANTPVNCGLSfVEWFNKDRPNPNELTGAIVGGPDRQDNFVDKRWNSSYTEPCTYINSLA 476


                   ....
gi 1901004681  479 LGLL 482
Cdd:PLN02909   477 VGVL 480
PLN02345 PLN02345
endoglucanase
 32-482 4.87e-156

endoglucanase


Pssm-ID: 177979  Cd Length: 469  Bit Score: 490.03  E-value: 4.87e-156
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   32 ALRKSILFFEGQRSGKLPpDQRLKWRRDSALRDGSSAGVDLTGGYYDAGDNVKFGFPMAFTTTMMSWSVIDFGKTMGP-- 109
Cdd:PLN02345     1 ALKIALQFFDIQKSGKLE-NNPIPWRGDSALLDGSDAGLDLSKGMYDAGDHMKFGFPMAFTATVLSWSILEYGDQMNAan 79

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  110 ELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSDHNCWERPEDMDTLRTVYKIDKDHSGSEVAGETAAALAAASIVFE 189
Cdd:PLN02345    80 QLDSAKDSLKWITDYLINAHPSENVLYIQVGDPKLDHKCWERPETMDEKRPLTKINTSSPGSEVAAETAAAMAAASLVFK 159

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  190 KRDPVYSKMLLDRATRVFAFAQKYRGAYSDSlYQAVCPFYcDFNGYEDELLWGAAWLHKASKKRVYREFI-VKNqvilra 268
Cdd:PLN02345   160 SSDSTYSDTLLKHAKQLFNFADKYRGSYSES-IPEVQDYY-NSTGYGDELLWAASWLYHATGDKTYLAYVtGKN------ 231

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  269 GDTIHEFG------WDNKHAGINVLISKMVLMGKAEY-------FQSFKQNADEFICSLLPGISHPQVQYSQGGLLVKSG 335
Cdd:PLN02345   232 GKEFADWGsptwfsWDDKLAGTQVLLSRLTFFGPKGAsntvnsgLQMYKKTAEAVMCGLLPDSPTATTSRTDGGLIWVSE 311

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  336 GSNMQHVTSLSFLLLTYSNYLSHANKV-VPCGEFTASPALLRQVAKRQVDYILGDNPMKMSYMVGYGSKFPQMIHHRGSS 414
Cdd:PLN02345   312 WNALQHAVNSAFLAVLYSDYMLSSGIAkLSCSGKSFKPSDLRKFAKSQADYILGKNPMKMSYLVGYGDKYPQYVHHRGAS 391

                          410       420       430       440       450       460
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1901004681  415 VPSVVDhpdrIGCKDGSRYFLSNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYINAPLLGLL 482
Cdd:PLN02345   392 IPADAK----TGCKDGFKWLHSSEPNPNVATGALVGGPFQNDTFVDSRDNSMQNEPTTYNSALLVGLL 455
Glyco_hydro_9 pfam00759
Glycosyl hydrolase family 9;
31-482 6.51e-155

Glycosyl hydrolase family 9;


Pssm-ID: 459928 [Multi-domain]  Cd Length: 376  Bit Score: 482.86  E-value: 6.51e-155
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681   31 DALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGS------SAGVDLTGGYYDAGDNVKFGFPMAFTTTMMSWSVIDFG 104
Cdd:pfam00759    1 EALQKSLLFFYAQRSGKLPDNNRVAWRGDSHLDDGAaalsgdDGGVDLSGGWYDAGDYVKFGVPMAFTVTMLLWAYEEFP 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  105 KTMG--PELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSDHNCWERPEDMDTLRTVYKIDKDHSGSEVAGETAAALA 182
Cdd:pfam00759   81 DAYKaaGDLDHILDELKWGLDYLLKMHPSDGVLYVQVGDGDADHKCWGPPEDMTTPRPVYKIDASNPGTDAAAETAAALA 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  183 AASIVFEKRDPVYSKMLLDRATRVFAFAQKYRGaYSDSLYQAVCPFYCDfNGYEDELLWGAAWLHKASKKRVYREFIVKN 262
Cdd:pfam00759  161 AASRVFKKSDPAYAAKLLAAAKQLYAFADTYRG-YSDSIPAVGGGFYNS-SGYEDELLWAAAWLYKATGDSSYLDYAESY 238

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  263 ---QVILRAGDTIHEFGWDNKHAGinvliskmvlmgkaeyfqsfkqnadeficsllpgishpqvqysqggllvksggsnm 339
Cdd:pfam00759  239 ysaLGGTAFSSTGWGFSWDNKVAG-------------------------------------------------------- 262

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  340 qHVTSLSFLLLTYSNYLSHANKvvpcgeftaspalLRQVAKRQVDYILGDNPMKMSYMVGYGSKFPQMIHHRGSSVPSVV 419
Cdd:pfam00759  263 -YAANAAFLLLVYADLLGDPSK-------------YRDFAKSQIDYLLGDNPLGMSYVVGYGENSPKNPHHRAASGSSRD 328

                          410       420       430       440       450       460
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1901004681  420 DhpdrigckdgsryflSNNPNPNLLIGAVVGGPNITDDFPDSRPYFQLTEPTTYINAPLLGLL 482
Cdd:pfam00759  329 A---------------SPAPNPNPLPGALVGGPNPDDSYVDDRNDYSTNEVAIDYNAPLVGAL 376
PLN03058 PLN03058
dynein light chain type 1 family protein; Provisional
 483-572 1.27e-58

dynein light chain type 1 family protein; Provisional


Pssm-ID: 166697 [Multi-domain]  Cd Length: 128  Bit Score: 198.30  E-value: 1.27e-58
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  483 EQQDQKDEFNVRVRASDMPLPQQNRAFSLSREILNATPGKADNKRLAHALKKDFDSAYGPAWHCIVGTSFGSYVTHSTGG 562
Cdd:PLN03058    26 EQQDQKDELNVRVRASDMPLVLQNRAFSCARDILDAMPGKLDSKRLALALKKEFDSAYGPAWHCIVGTSFGSYVTHSTGG 105

                           90
                   ....*....|
gi 1901004681  563 FLYFQIDKVY 572
Cdd:PLN03058   106 FLYFSIDKVY 115
DLC-like_DYNLL1_DYNLL2 cd21452
dynein light chain (DLC)-like domain found in the cytoplasmic dynein light chain 1 (DYNLL1) ...
 492-571 1.92e-29

dynein light chain (DLC)-like domain found in the cytoplasmic dynein light chain 1 (DYNLL1) family; The cytoplasmic dynein light chain 1 (DYNLL1) family includes DYNLL1 and DYNLL2. DYNLL1, also called protein inhibitor of neuronal nitric oxide synthase (PIN), or 8 kDa dynein light chain (DLC8), or dynein light chain LC8-type 1 (DLC1), acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. It may play a role in changing or maintaining the spatial distribution of cytoskeletal structures. Both DYNLL1 and DYNLL2 (also called 8 kDa dynein light chain b, or DLC8b, or dynein light chain LC8-type 2, or DLC2) are non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. The model corresponds to the dynein light chain (DLC)-like domain of DYNLL1 and DYNLL2.


Pssm-ID: 412000  Cd Length: 84  Bit Score: 112.97  E-value: 1.92e-29
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  492 NVRVRASDMPLPQQNRAFSLSREILNATPGkadNKRLAHALKKDFDSAYGPAWHCIVGTSFGSYVTHSTGGFLYFQIDKV 571
Cdd:cd21452      1 KAVIKNADMPEEMQQDAIELATQALEKYNI---EKDIAAYIKKEFDKKYGPTWHCIVGRNFGSYVTHETKHFIYFYIGQV 77
Dynein_light pfam01221
Dynein light chain type 1;
492-572 2.84e-26

Dynein light chain type 1;


Pssm-ID: 460119  Cd Length: 83  Bit Score: 104.15  E-value: 2.84e-26
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  492 NVRVRASDMPLPQQNRAFSLSREILNATPgkaDNKRLAHALKKDFDSAYGPAWHCIVGTSFGSYVTHSTGGFLYFQIDKV 571
Cdd:pfam01221    1 KAVIKASDMPEEMQQEAIEIAQEALEKYN---IEKDIAAYIKKEFDKKYGPTWHCIVGKNFGSYVTHETGHFIYFYIGNL 77


                   .
gi 1901004681  572 Y 572
Cdd:pfam01221   78 A 78
Med23 pfam11573
Mediator complex subunit 23; Med23 is one of the subunits of the Tail portion of the Mediator ...
 1244-1852 1.27e-24

Mediator complex subunit 23; Med23 is one of the subunits of the Tail portion of the Mediator complex that regulates RNA polymerase II activity. Med23 is required for heat-shock-specific gene expression, and has been shown to mediate transcriptional activation of E1A in mice.


Pssm-ID: 463299  Cd Length: 1301  Bit Score: 113.23  E-value: 1.27e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1244 TPLPMSLLSgfSMNLCLKLALQMEEALFV-------SQVVPSIAMVETYTRLLLISP-HSM----FRSHFSRNASLLSKP 1311
Cdd:pfam11573  523 TPLSMEFLD--SLTVHSKMSLIHSIVTHVikfaqskSSVALAPALVETYSRLLVYTEiESLgikgFISQLLPTVFKSQAW 600

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1312 GVTLLVLEILNYRL---LPLYRYQgksktlmydVTKIISALKGKRGDHR--IFRLAENLCMNLILSLRDFF---SVKREG 1383
Cdd:pfam11573  601 GILHTLLEMFSYRMhhiQPHYRVQ---------LLSHLHSLANVPQTNQtqLHLCVESTALRLITGLGSSEvqpQLSRFL 671

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1384 KGPTEF-----TETLNRITIMTLAITIKTRGiADPDHMVYLQTMLEQILATSQHTWSEKTMRHFPSLLRETLKgrvdKRG 1458
Cdd:pfam11573  672 NEPKTFlvsqeSEELNRALILTLARAIHITG-TGTDSESWCKELLETIMQNTPHGWPQHTLSCFPPWLLEFFK----QNN 746

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1459 LSIQAWQQAETTVINQCTQLLSPSAE-------------------------------PAYARVLREVSPEEVTANIYTLV 1507
Cdd:pfam11573  747 VPKENKQQLKKNVEEEYRKWTSMTNEndiiahfsvpgtpplflcllwkmlletdritPIAYKVLERIGARALSAHLRKFC 826

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1508 DVLLHHVHVDlQQGQSLEAVLDKaganLAFFFWTHEMLPLDIFLLALIDR-DDDPHAL----IIAMSLLKTPDLLLRIKN 1582
Cdd:pfam11573  827 DYLVFEFTNS-CGGQHVNKCADA----LNDMIWKYNIVTIDRLVLCLALRpQEGNEAQvcffIIQLLLLKTTEFRNRVQD 901

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1583 YCQNRgSPEHWLvtqvfKRNELQKALGNHLSWKDRY----------------PTFFDDIAARLLPVIPLVLYRLIENNAM 1646
Cdd:pfam11573  902 FVKEN-SPEHWK-----QPNWHEKHLAYHRKFPEKFapegvaeydsssnpylPTYFGNVCLRFLPVLDIVIHRALELPPV 975

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1647 EQADNLLLAH-SHFLAYHPLRFTFVRDILAYfYGH-------LPGKLVLRMLKVLDLSKIP---FSESFPQYI--SPTGA 1713
Cdd:pfam11573  976 SKSLETLLEHlGCLYKFHDRPVTYLYNTLHY-YEHklrdrpdLKRKLVSAIIGSLKDCRPPgwaLTEAYEKYHqkSSDEQ 1054

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1714 PVCPPLDYFASLLlnlvnnvipplssssncssrsGSMADILNSSARPPHgktPGTSQpgpanasegqkAFYQIQDPGTYT 1793
Cdd:pfam11573 1055 LIWLPEDYYMKLI---------------------DRMVDTMDGKTPPPF---PAKDW-----------RFNEFPNPGAHA 1099

                          650       660       670       680       690       700
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681 1794 qlvLETAVIEILSLPVSAAQIVSSLVQIIVNIQStLIQSgNGFHGAANGVGQ-GSALPTS 1852
Cdd:pfam11573 1100 ---LYVTCVELMALPVSPETVANALIDVVQKGYH-LIPR-NQIHLWINAIGLiLTALPES 1154
DLC-like_DYNLL1-like cd21450
dynein light chain (DLC)-like domain found in cytoplasmic dynein light chain 1 (DYNLL1), ...
 524-572 1.26e-18

dynein light chain (DLC)-like domain found in cytoplasmic dynein light chain 1 (DYNLL1), axonemal dynein light chain 4 (DNAL4), tegumental-allergen-like proteins (TALs) and similar proteins; The family includes cytoplasmic dynein light chain 1 (DYNLL1), DYNLL2, axonemal dynein light chain 4 (DNAL4), and tegumental-allergen-like proteins (TALs). DYNLL1, also called protein inhibitor of neuronal nitric oxide synthase (PIN), or 8 kDa dynein light chain (DLC8), or dynein light chain LC8-type 1 (DLC1), is one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. It acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. It may play a role in changing or maintaining the spatial distribution of cytoskeletal structures. DYNLL2, also called cytoplasmic dynein light chain 2, or 8 kDa dynein light chain b (DLC8b), or dynein light chain LC8-type 2 (DLC2), is one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. DNAL4 is a force generating protein of respiratory cilia. It produces force towards the minus ends of microtubules. TALs, also called tegument antigens, are characterized by two N-terminal EF-hand motifs and a C-terminal region resembling a dynein light chain (DLC)-like domain. They were mainly found in parasitic platyhelminth species. TALs are strongly associated with the tegument, a syncytial structure that forms the outer layer of the organism. They may be involved in the transport of vesicles within the tegumental cytoplasm, probably within dynein motor complexes.


Pssm-ID: 411998  Cd Length: 68  Bit Score: 81.81  E-value: 1.26e-18
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 1901004681  524 DNKRLAHALKKDFDSAYGPAWHCIVGTSFGSYVTHSTGGFLYFQIDKVY 572
Cdd:cd21450     15 SEKDIAKYIKKELDKKYGPTWHCIVGKSFGSSVTHEPGTFIYFKVGDLA 63
PTZ00059 PTZ00059
dynein light chain; Provisional
 488-571 8.29e-15

dynein light chain; Provisional


Pssm-ID: 185421  Cd Length: 90  Bit Score: 71.76  E-value: 8.29e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  488 KDEFNVRVRASDMPLPQQNRAFSLSREILNATPGKADnkrLAHALKKDFDSAYGPAWHCIVGTSFGSYVTHSTGGFLYFQ 567
Cdd:PTZ00059     2 MSDRKAVVKNADMSEDMQQDAIDCANQALEKFNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFY 78


                   ....
gi 1901004681  568 IDKV 571
Cdd:PTZ00059    79 LGQV 82
DLC-like_TAL cd21454
dynein light chain (DLC)-like domain found in the family of tegumental-allergen-like proteins ...
 492-574 3.25e-10

dynein light chain (DLC)-like domain found in the family of tegumental-allergen-like proteins (TALs); Tegumental-allergen-like proteins (TALs), also called tegument antigens, are characterized by two N-terminal EF-hand motifs and a C-terminal region resembling a dynein light chain (DLC)-like domain. They were mainly found in parasitic platyhelminth species. TALs are strongly associated with the tegument, a syncytial structure that forms the outer layer of the organism. They may be involved in the transport of vesicles within the tegumental cytoplasm, probably within dynein motor complexes. The model corresponds to the dynein light chain (DLC)-like domain of TAL.


Pssm-ID: 412002  Cd Length: 87  Bit Score: 58.36  E-value: 3.25e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1901004681  492 NVRVRASDMPLPQQNRAFSLSREILNATPGKaDNKRLAHALKKDFDSAYGPAWHCIVGT-SFGSYVTHSTGGFLYFQIDK 570
Cdd:cd21454      1 DIEVISADMPLEMQVKILEKVRELLRESKKK-NLKELVQELKRYLDERYGRLWHVVIVRgSYWASYSHEPGTSFHFRLGD 79


                   ....*...
gi 1901004681  571 ----VYRT 574
Cdd:cd21454     80 yiylVWRT 87
DLC-like_DNAL4 cd21453
dynein light chain (DLC)-like domain found in axonemal dynein light chain 4 (DNAL4) and ...
 495-565 9.96e-08

dynein light chain (DLC)-like domain found in axonemal dynein light chain 4 (DNAL4) and similar proteins; Axonemal dynein light chain 4 (DNAL4) is a force generating protein of respiratory cilia. It produces force towards the minus ends of microtubules. The model corresponds to the dynein light chain (DLC)-like domain of DNAL4.


Pssm-ID: 412001  Cd Length: 83  Bit Score: 51.37  E-value: 9.96e-08
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1901004681  495 VRASDMPLPQQNRAFslsrEILNATPGK--ADNKRLAHALKKDFDSAYGPAWHCIVGTSFGSYVTHSTGGFLY 565
Cdd:cd21453      2 VKHSDMPEEMRTEAV----EICVTACEKfsNNNELAAKMIKETLDKKFGPSWHVVVGEGFGFEITYEVKNLLY 70
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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