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Conserved domains on  [gi|1897214777]
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Chain D, Small vasohibin-binding protein

Protein Classification

CCDC23 domain-containing protein( domain architecture ID 11238843)

CCDC23 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CCDC23 pfam15674
Coiled-coil domain-containing protein 23; This family of proteins is found in eukaryotes. ...
 6-62 3.20e-16

Coiled-coil domain-containing protein 23; This family of proteins is found in eukaryotes. Proteins in this family are typically between 66 and 78 amino acids in length. There are two completely conserved residues (K and E) that may be functionally important.


:

Pssm-ID: 434848  Cd Length: 57  Bit Score: 64.94  E-value: 3.20e-16
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 1897214777  6 RKEKTKVKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQMQ 62
Cdd:pfam15674  1 RKEKPKVKEPASRVEKAKQKSAQQELKQRQRAEIYALNKVMTELEQQQFDKFCKQMQ 57
 
Name Accession Description Interval E-value
CCDC23 pfam15674
Coiled-coil domain-containing protein 23; This family of proteins is found in eukaryotes. ...
 6-62 3.20e-16

Coiled-coil domain-containing protein 23; This family of proteins is found in eukaryotes. Proteins in this family are typically between 66 and 78 amino acids in length. There are two completely conserved residues (K and E) that may be functionally important.


Pssm-ID: 434848  Cd Length: 57  Bit Score: 64.94  E-value: 3.20e-16
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 1897214777  6 RKEKTKVKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQMQ 62
Cdd:pfam15674  1 RKEKPKVKEPASRVEKAKQKSAQQELKQRQRAEIYALNKVMTELEQQQFDKFCKQMQ 57
 
Name Accession Description Interval E-value
CCDC23 pfam15674
Coiled-coil domain-containing protein 23; This family of proteins is found in eukaryotes. ...
 6-62 3.20e-16

Coiled-coil domain-containing protein 23; This family of proteins is found in eukaryotes. Proteins in this family are typically between 66 and 78 amino acids in length. There are two completely conserved residues (K and E) that may be functionally important.


Pssm-ID: 434848  Cd Length: 57  Bit Score: 64.94  E-value: 3.20e-16
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 1897214777  6 RKEKTKVKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQMQ 62
Cdd:pfam15674  1 RKEKPKVKEPASRVEKAKQKSAQQELKQRQRAEIYALNKVMTELEQQQFDKFCKQMQ 57
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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