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Conserved domains on  [gi|1896070567|gb|QNJ47404|]
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NADH dehydrogenase subunit 6, partial (mitochondrion) [Zonocerus elegans]

Protein Classification

NADH dehydrogenase subunit 6( domain architecture ID 10009599)

NADH dehydrogenase subunit 6 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 3-173 3.67e-35

NADH dehydrogenase subunit 6; Provisional


:

Pssm-ID: 214445  Cd Length: 160  Bit Score: 120.30  E-value: 3.67e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070567   3 KILLMTISNSMNIFFIKLNHPMALMFIIIIQTLMTSMMIGNLMESFWLSYILVLTFLGGMMVLFIYITSITSNELFNLKS 82
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070567  83 LNVMMNISMMTIMLLSMITYEYTMMIDMFKNtdtnnlkltidTTEMSYSLLKLYNYPSLFVTMMMMIYLFLTLLVVVKIT 162
Cdd:MTH00166   81 KLLILFLLMLLLMLNNFIKNSEMSNFNNNFN-----------FFENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKIT 149

                         170
                  ....*....|.
gi 1896070567 163 NINQGPIRKIK 173
Cdd:MTH00166  150 NIFKGPLRSKN 160
 
Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 3-173 3.67e-35

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214445  Cd Length: 160  Bit Score: 120.30  E-value: 3.67e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070567   3 KILLMTISNSMNIFFIKLNHPMALMFIIIIQTLMTSMMIGNLMESFWLSYILVLTFLGGMMVLFIYITSITSNELFNLKS 82
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070567  83 LNVMMNISMMTIMLLSMITYEYTMMIDMFKNtdtnnlkltidTTEMSYSLLKLYNYPSLFVTMMMMIYLFLTLLVVVKIT 162
Cdd:MTH00166   81 KLLILFLLMLLLMLNNFIKNSEMSNFNNNFN-----------FFENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKIT 149

                         170
                  ....*....|.
gi 1896070567 163 NINQGPIRKIK 173
Cdd:MTH00166  150 NIFKGPLRSKN 160
 
Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 3-173 3.67e-35

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214445  Cd Length: 160  Bit Score: 120.30  E-value: 3.67e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070567   3 KILLMTISNSMNIFFIKLNHPMALMFIIIIQTLMTSMMIGNLMESFWLSYILVLTFLGGMMVLFIYITSITSNELFNLKS 82
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070567  83 LNVMMNISMMTIMLLSMITYEYTMMIDMFKNtdtnnlkltidTTEMSYSLLKLYNYPSLFVTMMMMIYLFLTLLVVVKIT 162
Cdd:MTH00166   81 KLLILFLLMLLLMLNNFIKNSEMSNFNNNFN-----------FFENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKIT 149

                         170
                  ....*....|.
gi 1896070567 163 NINQGPIRKIK 173
Cdd:MTH00166  150 NIFKGPLRSKN 160
ND6 MTH00212
NADH dehydrogenase subunit 6; Provisional
 4-171 4.21e-10

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214460  Cd Length: 160  Bit Score: 55.40  E-value: 4.21e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070567   4 ILLMTISNSMNIFFIKLNHPMALMFIIIIQTLMTSMMIGNLMESfWLSYILVLTFLGGMMVLFIYITSITSNELFNLKSL 83
Cdd:MTH00212    4 SLLLSLLLLLMLLFPLSAHPLTLGVSLLLSSLLSCLIITMESNS-WYGYILFLIYIGGLLVLFGYMVALSPNEHLFFKKY 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070567  84 nvmmnISMMTIMLLSMITYEYTMMIDMFKNTDTNNLKLTIDTTemsysllKLYNYPSLFVTMMMMIYLFLTLLVVVKITN 163
Cdd:MTH00212   83 -----FKGFGMILISLNLYLLLMTLGSSNFSPMLNLKLELNVS-------KILSNNNIPILLFLGLILLIALLMVVKICQ 150


                  ....*...
gi 1896070567 164 INQGPIRK 171
Cdd:MTH00212  151 YYKGPLRP 158
ND6 MTH00152
NADH dehydrogenase subunit 6; Provisional
 4-170 5.39e-07

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214437  Cd Length: 163  Bit Score: 46.80  E-value: 5.39e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070567   4 ILLMTISNSMNIFFIKLNHPMALMFIIIIQTLMTSMMIGnLMESFWLSYILVLTFLGGMMVLFIYITSITSNELFNLKSL 83
Cdd:MTH00152    4 MILLSVCFSLFLLLPLSKQPLSLGLVLLLLSLFVCVEIG-LTLSSWYGYLLFLVYVGGLLVMFAYVVSLSPNPLFGSNFK 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070567  84 NVMMNISMMTIMLLSMITYEYTMMIDMfkntdtNNLKLTIDTTEMSYSLLKLYNYPSLFVTMMMMIYLFLTLLVVVKITN 163
Cdd:MTH00152   83 FVFFSLTLFGFLGLFFFFLYLYSSGGL------SLSSLFDGSSGSLSFGGGLYSSSGWSIFVFLAVLLLIVMVSVVKICY 156


                  ....*..
gi 1896070567 164 INQGPIR 170
Cdd:MTH00152  157 YEEGSLR 163
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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