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Conserved domains on  [gi|1896070143|gb|QNJ47227|]
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NADH dehydrogenase subunit 3, partial (mitochondrion) [Prosarthria teretrirostris]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 12-115 8.61e-37

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 120.65  E-value: 8.61e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  12 LLISTTVMMTSTIIMNKMIIDREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLIKILKNSSTIMWSS 91
Cdd:MTH00161   10 LLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLI 89

                          90       100
                  ....*....|....*....|....
gi 1896070143  92 STFIIIIILIMGTYHEWNQGALNW 115
Cdd:MTH00161   90 TSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 12-115 8.61e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 120.65  E-value: 8.61e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  12 LLISTTVMMTSTIIMNKMIIDREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLIKILKNSSTIMWSS 91
Cdd:MTH00161   10 LLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLI 89

                          90       100
                  ....*....|....*....|....
gi 1896070143  92 STFIIIIILIMGTYHEWNQGALNW 115
Cdd:MTH00161   90 TSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
32-114 7.26e-20

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 77.08  E-value: 7.26e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  32 DREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLIKILKNSSTIM-WSSSTFiiIIILIMGTYHEWNQ 110
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFGfVEMLIF--IAILLVGLVYAWKK 90


                  ....
gi 1896070143 111 GALN 114
Cdd:pfam00507  91 GALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 32-115 4.65e-16

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 68.22  E-value: 4.65e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  32 DREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLIKILKNSSTI-MWSSSTFIIIIILimGTYHEWNQ 110
Cdd:COG0838    35 NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFgLIEMLVFIAILLV--GLIYAWKK 112


                  ....*
gi 1896070143 111 GALNW 115
Cdd:COG0838   113 GALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 12-115 8.61e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 120.65  E-value: 8.61e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  12 LLISTTVMMTSTIIMNKMIIDREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLIKILKNSSTIMWSS 91
Cdd:MTH00161   10 LLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLI 89

                          90       100
                  ....*....|....*....|....
gi 1896070143  92 STFIIIIILIMGTYHEWNQGALNW 115
Cdd:MTH00161   90 TSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 12-116 3.38e-35

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 116.88  E-value: 3.38e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  12 LLISTTVMMTSTIIMNKMIIDREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLIKILKNSSTIMWSS 91
Cdd:MTH00148   12 LILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSLT 91

                          90       100
                  ....*....|....*....|....*
gi 1896070143  92 STFIIIIILIMGTYHEWNQGALNWS 116
Cdd:MTH00148   92 SLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 12-115 2.00e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 104.69  E-value: 2.00e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  12 LLISTTVMMTSTIIMNKMIIDREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLIKILKNSSTIMWSS 91
Cdd:MTH00202   12 ILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLL 91

                          90       100
                  ....*....|....*....|....
gi 1896070143  92 STFIIIIILIMGTYHEWNQGALNW 115
Cdd:MTH00202   92 GGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 12-116 1.99e-27

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 97.24  E-value: 1.99e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  12 LLISTTVMMTSTIIMNKMIIDREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLIKILKNSSTIMWSS 91
Cdd:MTH00012   12 LILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVY 91

                          90       100
                  ....*....|....*....|....*
gi 1896070143  92 STFIIIIILIMGTYHEWNQGALNWS 116
Cdd:MTH00012   92 TSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 13-115 1.62e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 94.99  E-value: 1.62e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  13 LISTTVMMTSTIIMNKMII---------DREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPL---IKI 80
Cdd:MTH00136    3 LITTILTITIALSLILAIVsfwlpqmtpDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLpwgDQL 82

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1896070143  81 LKNSSTIMWSSSTFiiiIILIMGTYHEWNQGALNW 115
Cdd:MTH00136   83 PSPLLTFFWATAVL---ILLTLGLIYEWLQGGLEW 114
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 13-115 3.58e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 91.21  E-value: 3.58e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  13 LISTTVMMTSTIIMNKMII---------DREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPL---IKI 80
Cdd:MTH00069    1 LIMLMLLISTILSLILITIsfwlplnnpDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwaSQL 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1896070143  81 LKNSSTIMWSSstfIIIIILIMGTYHEWNQGALNW 115
Cdd:MTH00069   81 NTPTNTLFWST---LILILLTLGLIYEWIQGGLEW 112
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 13-115 4.95e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 88.40  E-value: 4.95e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  13 LISTTVMMTSTIIMNKMIIDREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLIKILKNSSTIMWSSS 92
Cdd:MTH00113   11 LALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTTTLTW 90

                          90       100
                  ....*....|....*....|...
gi 1896070143  93 TFIIIIILIMGTYHEWNQGALNW 115
Cdd:MTH00113   91 ATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 12-115 6.94e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 88.03  E-value: 6.94e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  12 LLISTTVMMTSTIIMNKMIIDREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLIKILKNSSTIMWSS 91
Cdd:MTH00203   11 ALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSLSLLLA 90

                          90       100
                  ....*....|....*....|....
gi 1896070143  92 STFiiIIILIMGTYHEWNQGALNW 115
Cdd:MTH00203   91 FLF--LILLTLGLIYEWLQGGLEW 112
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 31-117 3.31e-23

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 86.57  E-value: 3.31e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  31 IDREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLI--KILKNSSTIMWSSSTFiiIIILIMGTYHEW 108
Cdd:MTH00042   30 PDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPpaTLITNPSTLLPISLIF--LIILTIGLVYEW 107


                  ....*....
gi 1896070143 109 NQGALNWSN 117
Cdd:MTH00042  108 VNGGLEWAE 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 12-116 1.41e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 84.99  E-value: 1.41e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  12 LLISTTVMMTSTIIM---NKMIIDREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLIKILKNSSTIM 88
Cdd:MTH00106    7 LLTNTLLASLLVLIAfwlPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNT 86

                          90       100
                  ....*....|....*....|....*...
gi 1896070143  89 WSSSTFIIIIILIMGTYHEWNQGALNWS 116
Cdd:MTH00106   87 MLTMALLLISLLALSLAYEWTQKGLEWT 114
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
32-114 7.26e-20

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 77.08  E-value: 7.26e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  32 DREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLIKILKNSSTIM-WSSSTFiiIIILIMGTYHEWNQ 110
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFGfVEMLIF--IAILLVGLVYAWKK 90


                  ....
gi 1896070143 111 GALN 114
Cdd:pfam00507  91 GALE 94
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 32-116 6.57e-17

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 70.66  E-value: 6.57e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  32 DREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLIKILKNSSTI-MWSSSTFiiIIILIMGTYHEWNQ 110
Cdd:PRK06602   38 DREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWLgFVEAMIF--ILVLLVGLVYLWRK 115


                  ....*.
gi 1896070143 111 GALNWS 116
Cdd:PRK06602  116 GALDWE 121
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 32-115 4.65e-16

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 68.22  E-value: 4.65e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  32 DREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLIKILKNSSTI-MWSSSTFIIIIILimGTYHEWNQ 110
Cdd:COG0838    35 NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFgLIEMLVFIAILLV--GLIYAWKK 112


                  ....*
gi 1896070143 111 GALNW 115
Cdd:COG0838   113 GALEW 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 12-115 4.41e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 65.89  E-value: 4.41e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  12 LLISTTVMMTSTIIMNKMIiDREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLIKILkNSSTIMWSS 91
Cdd:MTH00055   16 IGLSTVISGASYIVGVKQP-DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVY-NQIGLFGFW 93

                          90       100
                  ....*....|....*....|....
gi 1896070143  92 STFIIIIILIMGTYHEWNQGALNW 115
Cdd:MTH00055   94 VMYLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 13-115 4.41e-15

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 65.47  E-value: 4.41e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  13 LISTTVMMTSTIIMNKmIIDREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLIkILKNSSTIMWSSS 92
Cdd:MTH00018   12 VLSALFSGASYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWC-VLYNQIAPFGFWT 89

                          90       100
                  ....*....|....*....|...
gi 1896070143  93 TFIIIIILIMGTYHEWNQGALNW 115
Cdd:MTH00018   90 MVGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 7.25e-12

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 57.64  E-value: 7.25e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  32 DREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLiKILKNSSTIMWSSSTFIIIIILIMGTYHEWNQG 111
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPW-SIVFNQLNLFSFWIVYTFLIVLAIGLAYEWIKG 118


                  ....
gi 1896070143 112 ALNW 115
Cdd:MTH00030  119 GLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 34-116 2.21e-06

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 43.05  E-value: 2.21e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  34 EKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPL---IKILKNSSTImwssSTFIIIIILIMGTYHEWNQ 110
Cdd:CHL00022   39 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWamsFDVLGVSAFI----EALIFVLILIVGLVYAWRK 114


                  ....*.
gi 1896070143 111 GALNWS 116
Cdd:CHL00022  115 GALEWS 120
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 30-75 3.94e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 39.88  E-value: 3.94e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1896070143  30 IIDREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLIL 75
Cdd:MTH00060   32 SGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLL 77
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-76 8.53e-05

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 38.96  E-value: 8.53e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1896070143  32 DREKTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILP 76
Cdd:PRK07756   39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP 83
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 35-117 1.41e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 38.34  E-value: 1.41e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  35 KTSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEITLILPLIKILKNSSTimwssSTFIIIIILIMGTYHEWNQGALN 114
Cdd:MTH00092   34 KVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVSDFSSLI-----SFFMLMIFIFFGFYMEWWYGKLI 108


                  ...
gi 1896070143 115 WSN 117
Cdd:MTH00092  109 WVI 111
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 32-115 3.06e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 37.34  E-value: 3.06e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  32 DREKTSPFECGFDPKSSARMP--FSLRFFLIAVIFLIFDVEITLILPLiKILKNSSTIMWSSSTFIIIIILIMGTYHEWN 109
Cdd:PRK07928   34 NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPW-AVSFDALGVFGLVEMALFMLTVFVAYAYVWR 112


                  ....*.
gi 1896070143 110 QGALNW 115
Cdd:PRK07928  113 RGGLEW 118
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
12-117 1.91e-03

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 35.41  E-value: 1.91e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070143  12 LLISTTVMMTSTIIMNKMI------IDRE--KTSPFECGFDP-KSSARMpfSLRFFLIAVIFLIFDVEITLILPLIKILK 82
Cdd:PRK08489   16 LLVLTFVAFFLTTRLARFIsrklaqKNTEklKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVDFK 93

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1896070143  83 NSSTIMWsSSTFIIIIILIMGTYHEWNQGALNWSN 117
Cdd:PRK08489   94 LLGLFGL-IEMLLFIVLLTIGFIYAWKKGALEWQS 127
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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