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Conserved domains on  [gi|1896069979|gb|QNJ47145|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Zonocerus variegatus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 4.34e-138

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 392.60  E-value: 4.34e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   5 LLMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFS 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  85 LMISLLIWSVFPYITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 165 GFNLFDFLNYQIYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMLM 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069979 245 SLVFLGGDFYSLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYVGLSILL 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 4.34e-138

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 392.60  E-value: 4.34e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   5 LLMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFS 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  85 LMISLLIWSVFPYITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 165 GFNLFDFLNYQIYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMLM 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069979 245 SLVFLGGDFYSLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYVGLSILL 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
13-304 9.76e-95

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 282.44  E-value: 9.76e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  13 VLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFSLMISLLIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  93 SVFPY--ITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGGFNLFD 170
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 171 FLNYQIYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMLMSLVFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 251 G------DFYSLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYV 304
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-311 1.13e-88

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 268.15  E-value: 1.13e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   4 DLLMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  84 SLMISLLIWSVFPYITYMC--SFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 162 LVGGFNLFDFLNYQI-YCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 241 SMLMSLVFLGG--------DFYSLI----FYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLnFLLFYVGLSI 308
Cdd:COG1005   247 SALATTLFLGGwlgpfpilPLGGLPgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325


                  ...
gi 1896069979 309 LLI 311
Cdd:COG1005   326 LLF 328
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 4.34e-138

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 392.60  E-value: 4.34e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   5 LLMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFS 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  85 LMISLLIWSVFPYITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 165 GFNLFDFLNYQIYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMLM 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069979 245 SLVFLGGDFYSLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYVGLSILL 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 6-308 2.67e-119

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 345.10  E-value: 2.67e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   6 LMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFSL 85
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  86 MISLLIWSVFPYITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGG 165
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 166 FNLFDFLNYQIYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMLMS 245
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1896069979 246 LVFLGGDFY--SLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYVGLSI 308
Cdd:MTH00225  241 ILFFGGFFVtiDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 6-307 1.27e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 310.26  E-value: 1.27e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   6 LMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFSL 85
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  86 MISLLIWSVFPYITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGG 165
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 166 FNLFDFLNYQIYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMLMS 245
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069979 246 LVFLGGDF-----YSLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYVGLS 307
Cdd:MTH00143  241 VLFFGGSSvlfllGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 5-310 6.03e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 296.05  E-value: 6.03e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   5 LLMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFS 84
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  85 LMISLLIWSVFPYITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 165 GFNLFDFLNYQIYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMLM 244
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069979 245 SLVFLGGDFYSLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYVGLSILL 310
Cdd:MTH00218  241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-310 6.87e-98

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 291.14  E-value: 6.87e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   7 MFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFSLM 86
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  87 ISLLIWSVFPYITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGGF 166
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 167 NLFDFLNYQIYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMLMSL 246
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1896069979 247 VFLGG-------DFYSLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYVGLSILL 310
Cdd:MTH00104  241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMT 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 3-310 1.92e-96

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 287.64  E-value: 1.92e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   3 YDLLMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPI 82
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  83 FSLMISLLIWSVFPYITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00040   81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 163 VGGFNLFDFLNYQIYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSM 242
Cdd:MTH00040  161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069979 243 LMSLVFLGGD--------FYSLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYVGLSILL 310
Cdd:MTH00040  241 LSVILFLGGGspfneifpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 5-308 2.47e-96

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 287.18  E-value: 2.47e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   5 LLMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFS 84
Cdd:MTH00111    4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  85 LMISLLIWSVFPYITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00111   84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 165 GFNLFDFLNYQIYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMLM 244
Cdd:MTH00111  164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1896069979 245 SLVFL-------GGDFYSLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYVGLSI 308
Cdd:MTH00111  244 TILFLnpstlnlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPI 314
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 5-310 5.68e-96

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 285.87  E-value: 5.68e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   5 LLMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFS 84
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  85 LMISLLIWSVFPYITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 165 GFNLFDFLNYQIYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMLM 244
Cdd:MTH00195  161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069979 245 SLVFLGGDfYSLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYVGLSILL 310
Cdd:MTH00195  241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-311 3.79e-95

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 284.21  E-value: 3.79e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   5 LLMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFS 84
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  85 LMISLLIWSVFPYITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 164
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 165 GFNLFDFLNYQIYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMLM 244
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1896069979 245 SLVFLGGDFY-------SLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYVGLSILLI 311
Cdd:MTH00071  244 TILFLGSTYNhlqpelsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTL 317
NADHdh pfam00146
NADH dehydrogenase;
13-304 9.76e-95

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 282.44  E-value: 9.76e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  13 VLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFSLMISLLIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  93 SVFPY--ITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGGFNLFD 170
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 171 FLNYQIYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMLMSLVFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 251 G------DFYSLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYV 304
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-310 3.48e-91

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 274.18  E-value: 3.48e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   1 MLYDLLMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFA 80
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  81 PIFSLMISLLIWSVFPYITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 160
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 161 ILVGGFNLFDFLNYQIYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFM 240
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069979 241 SMLMSLVFLGGDFY-------SLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYVGLSILL 310
Cdd:MTH00134  241 NTLSAILFLGASHIptlpeltTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-311 1.13e-88

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 268.15  E-value: 1.13e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   4 DLLMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  84 SLMISLLIWSVFPYITYMC--SFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 162 LVGGFNLFDFLNYQI-YCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 241 SMLMSLVFLGG--------DFYSLI----FYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLnFLLFYVGLSI 308
Cdd:COG1005   247 SALATTLFLGGwlgpfpilPLGGLPgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325


                  ...
gi 1896069979 309 LLI 311
Cdd:COG1005   326 LLF 328
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-297 2.36e-86

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 261.67  E-value: 2.36e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   5 LLMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFS 84
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  85 LMISLLIWSVFPYI-TYMCSFM-YGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:PRK06076   89 FIPAFLAWAVIPFGpELVIADLnVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 163 VGGFNLFDFLNYQIYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSM 242
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1896069979 243 LMSLVFLGG----------DFYSLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:PRK06076  249 LITTLFLGGwlppfplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 8-311 7.33e-85

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 257.79  E-value: 7.33e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   8 FILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFSLMI 87
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  88 SLLIWSVFPYITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGGFN 167
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 168 LFDFLNYQiYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMLMSLV 247
Cdd:MTH00010  165 FSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1896069979 248 FLG----GDFYSLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYVGLSILLI 311
Cdd:MTH00010  244 FTSfipsIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 5-308 7.31e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 255.42  E-value: 7.31e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   5 LLMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFS 84
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  85 LMISLLIWSVFPYIT--YMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00054   81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 163 VGGFNLFDFLNYQIYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSM 242
Cdd:MTH00054  161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896069979 243 LMSLVFLGGDFYSLI----------FYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYVGLSI 308
Cdd:MTH00054  241 FGVILFLGGWLVISGptsyfsnfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILI 316
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-306 5.22e-80

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 245.80  E-value: 5.22e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   1 MLYDLLMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFA 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  81 PIFSLMISLLIWSVFPYI--TYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 159 LIILVGGFNLFDFLNYQI-YCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSI 237
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069979 238 IFMSMLMSLVFLGG--------DFYSLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYVGL 306
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 14-308 7.39e-68

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 215.27  E-value: 7.39e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  14 LLLIFV--LISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFSLMISLLI 91
Cdd:MTH00029   13 LLIIFVplLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILA 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  92 WSVFPYI--TYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGGFNLF 169
Cdd:MTH00029   93 WAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNIS 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 170 DFLNYQIYCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMLMSLVFL 249
Cdd:MTH00029  173 EIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFL 252

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 250 GG-----------------------DFYSLIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYVGL 306
Cdd:MTH00029  253 GGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGI 332


                  ..
gi 1896069979 307 SI 308
Cdd:MTH00029  333 LI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-308 8.43e-60

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 192.42  E-value: 8.43e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  11 NFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFSLMISLL 90
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  91 IWSVFPYITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGGFNLFD 170
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 171 FlnyqiycwFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMLMSLVFLg 250
Cdd:MTH00090  161 S--------FSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF- 231

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1896069979 251 gDFYSLIFYVklsyIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYVGLSI 308
Cdd:MTH00090  232 -KFSFLMLFL----IFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 16-304 1.38e-44

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 153.54  E-value: 1.38e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  16 LIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAPIFSLMISLLIWSVF 95
Cdd:MTH00058   11 LLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIY 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  96 PYITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGGFNLFDFLNYq 175
Cdd:MTH00058   91 GSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYS- 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 176 iyCWFSICCFPLMICCFASC-LAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFMSMLMSLVFLGGDFY 254
Cdd:MTH00058  170 --GWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFV 247

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1896069979 255 SLIfyvkLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYV 304
Cdd:MTH00058  248 SIM----LLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-311 1.31e-27

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 110.04  E-value: 1.31e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   2 LYDLLMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPNKVGFFGILQSFSDALKLITSEQPIPLMSNYFLYYFAP 81
Cdd:CHL00032   23 VYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGP 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  82 IFSLMISLLIWSVFP--YITYMCSFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 159
Cdd:CHL00032  103 SIAVISILLSYLVIPfgYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 160 IILVGGFNLFDFLN----YQIYCWfSICCFPL-MICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEY 234
Cdd:CHL00032  183 SLLSNSLSTVDIVEaqskYGFWGW-NLWRQPIgFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASY 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 235 TSIIFMSMLMSLVFLGG-----------DFYSL------------IFYVKLSYIMFCFVWI--RGTLPRFRYDKLMYLAW 289
Cdd:CHL00032  262 LNLLVSSLFVTVLYLGGwnlsipyifipELFEInktggvfgttigIFITLAKTYLFLFISIttRWTLPRLRMDQLLNLGW 341

                         330       340
                  ....*....|....*....|..
gi 1896069979 290 KSFLPLSLNFLLFYVGLSILLI 311
Cdd:CHL00032  342 KFLLPISLGNLLLTTSFQLLSL 363
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-304 1.70e-23

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 97.56  E-value: 1.70e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979   6 LMFILNFVLLLIFVLISVAFLVLFERSVLGFIHIRKGPnkvgffGILQSFSDALKLITSEQPIPLMSNyFLYYFAPIFSL 85
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979  86 MISLLIWSVFPYITYMC--SFMYGFLFFLCCTSLSVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILV 163
Cdd:COG0650    74 AAMLLAALLVPVLTTGPplSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 164 GGFNLFDFLNYQI---YCWFSICCFPLMICCFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLSEYTSIIFM 240
Cdd:COG0650   154 GSTSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069979 241 SMLMSLVFLGGDFYS------LIFYVKLSYIMFCFVWIRGTLPRFRYDKLMYLAWKSFLPLSLNFLLFYV 304
Cdd:COG0650   234 LSLFVNLFLPWGIALtlllalLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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