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Conserved domains on  [gi|1896069889|gb|QNJ47100|]
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cytochrome b, partial (mitochondrion) [Zonocerus elegans]

Protein Classification

cytochrome b/b6( domain architecture ID 11475928)

cytochrome b/b6 (PetB) is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme; cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes; in plants and cyanobacteria, cytochrome b6 is analogous to cytochrome b and contains two chains: helices A-D (encoded by petB) and helices E-H (encoded by petD)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


:

Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 671.49  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  12 FKIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTLHANGASMF 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  92 FICIYLHVGRGIYYSSYMYMHTWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 172 DNATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEKIPFHPYFSFKDSITIISMTSLLIMLCLINPYML 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 252 SDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTYFRGIQFYPMNQIMFWIMVT 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1896069889 332 TVVLLTWIGKRPVEEPYILTGQLLTTMYFSYFIMN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 671.49  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  12 FKIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTLHANGASMF 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  92 FICIYLHVGRGIYYSSYMYMHTWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 172 DNATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEKIPFHPYFSFKDSITIISMTSLLIMLCLINPYML 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 252 SDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTYFRGIQFYPMNQIMFWIMVT 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1896069889 332 TVVLLTWIGKRPVEEPYILTGQLLTTMYFSYFIMN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
10-364 7.92e-120

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 352.17  E-value: 7.92e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  10 PLFKIINHSLiDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTLHANGAS 89
Cdd:COG1290    19 PLASLVREHL-EYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  90 MFFICIYLHVGRGIYYSSYMYMH--TWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQWIWG 167
Cdd:COG1290    98 LFFAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 168 GFAVDNATLNRFFTFHFM-MPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEK----IPFHPYFSFKDSITIisMTSLLIM 242
Cdd:COG1290   178 GEFPGDATLNRFFALHVLlLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGF--FVFLGVF 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 243 LCLINPYMLSDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIP--NKLGGVIALFLSISILMILPFYNKTYFRGIQFYP 320
Cdd:COG1290   256 ALLAFFFPINPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1896069889 321 MNQIMFWIMVTTVVLLTWIGKRPveEPYILTGQLLTTMYFSYFI 364
Cdd:COG1290   336 VRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFL 377
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-207 1.28e-83

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 253.06  E-value: 1.28e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  10 PLFKIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTLHANGAS 89
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  90 MFFICIYLHVGRGIYYSSYMYMH--TWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQWIWG 167
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1896069889 168 GFAVDNATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSN 207
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-205 3.60e-76

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 233.43  E-value: 3.60e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  19 LIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTLHANGASMFFICIYLH 98
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  99 VGRGIYYSSYMYMH--TWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQWIWGGFAVDNATL 176
Cdd:pfam00033  81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1896069889 177 NRFFTFHFMMPFMIAAMVMIHLLFLHQMG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 231-307 2.58e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 55.57  E-value: 2.58e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069889 231 ITIISMTSLLIMLCLINPYMLSDPdnfipANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPF 307
Cdd:TIGR01156  42 VVILGTIACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPF 113
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 12-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 671.49  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  12 FKIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTLHANGASMF 91
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  92 FICIYLHVGRGIYYSSYMYMHTWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQWIWGGFAV 171
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 172 DNATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEKIPFHPYFSFKDSITIISMTSLLIMLCLINPYML 251
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 252 SDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTYFRGIQFYPMNQIMFWIMVT 331
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1896069889 332 TVVLLTWIGKRPVEEPYILTGQLLTTMYFSYFIMN 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
CYTB MTH00145
cytochrome b; Provisional
 1-374 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 598.81  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889   1 MNKPLRLKHPLFKIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWII 80
Cdd:MTH00145    1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  81 RTLHANGASMFFICIYLHVGRGIYYSSYMYMHTWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTD 160
Cdd:MTH00145   81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 161 LVQWIWGGFAVDNATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEKIPFHPYFSFKDSITIISMTSLL 240
Cdd:MTH00145  161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 241 IMLCLINPYMLSDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTYFRGIQFYP 320
Cdd:MTH00145  241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1896069889 321 MNQIMFWIMVTTVVLLTWIGKRPVEEPYILTGQLLTTMYFSYFIMNIHISLMWE 374
Cdd:MTH00145  321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWD 374
CYTB MTH00119
cytochrome b; Provisional
 1-365 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 593.80  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889   1 MNKPLRLKHPLFKIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWII 80
Cdd:MTH00119    1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  81 RTLHANGASMFFICIYLHVGRGIYYSSYMYMHTWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTD 160
Cdd:MTH00119   81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 161 LVQWIWGGFAVDNATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEKIPFHPYFSFKDSITIISMTSLL 240
Cdd:MTH00119  161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 241 IMLCLINPYMLSDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTYFRGIQFYP 320
Cdd:MTH00119  241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1896069889 321 MNQIMFWIMVTTVVLLTWIGKRPVEEPYILTGQLLTTMYFSYFIM 365
Cdd:MTH00119  321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLI 365
CYTB MTH00191
cytochrome b; Provisional
 5-365 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 589.58  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889   5 LRLKHPLFKIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTLH 84
Cdd:MTH00191    1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  85 ANGASMFFICIYLHVGRGIYYSSYMYMHTWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQW 164
Cdd:MTH00191   81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 165 IWGGFAVDNATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEKIPFHPYFSFKDSITIISMTSLLIMLC 244
Cdd:MTH00191  161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 245 LINPYMLSDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTYFRGIQFYPMNQI 324
Cdd:MTH00191  241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1896069889 325 MFWIMVTTVVLLTWIGKRPVEEPYILTGQLLTTMYFSYFIM 365
Cdd:MTH00191  321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
CYTB MTH00074
cytochrome b; Provisional
 1-374 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 580.48  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889   1 MNKPLRLKHPLFKIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWII 80
Cdd:MTH00074    1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  81 RTLHANGASMFFICIYLHVGRGIYYSSYMYMHTWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTD 160
Cdd:MTH00074   81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 161 LVQWIWGGFAVDNATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEKIPFHPYFSFKDSITIISMTSLL 240
Cdd:MTH00074  161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 241 IMLCLINPYMLSDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTYFRGIQFYP 320
Cdd:MTH00074  241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1896069889 321 MNQIMFWIMVTTVVLLTWIGKRPVEEPYILTGQLLTTMYFSYFIMNIHISLMWE 374
Cdd:MTH00074  321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLE 374
CYTB MTH00131
cytochrome b; Provisional
 5-364 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 580.46  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889   5 LRLKHPLFKIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTLH 84
Cdd:MTH00131    4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  85 ANGASMFFICIYLHVGRGIYYSSYMYMHTWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQW 164
Cdd:MTH00131   84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 165 IWGGFAVDNATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEKIPFHPYFSFKDSITIISMTSLLIMLC 244
Cdd:MTH00131  164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 245 LINPYMLSDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTYFRGIQFYPMNQI 324
Cdd:MTH00131  244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1896069889 325 MFWIMVTTVVLLTWIGKRPVEEPYILTGQLLTTMYFSYFI 364
Cdd:MTH00131  324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFL 363
CYTB MTH00100
cytochrome b; Provisional
 4-374 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 578.13  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889   4 PLRLKHPLFKIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTL 83
Cdd:MTH00100    3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  84 HANGASMFFICIYLHVGRGIYYSSYMYMHTWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQ 163
Cdd:MTH00100   83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 164 WIWGGFAVDNATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEKIPFHPYFSFKDSITIISMTSLLIML 243
Cdd:MTH00100  163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 244 CLINPYMLSDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTYFRGIQFYPMNQ 323
Cdd:MTH00100  243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1896069889 324 IMFWIMVTTVVLLTWIGKRPVEEPYILTGQLLTTMYFSYFIMNIHISLMWE 374
Cdd:MTH00100  323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIE 373
CYTB MTH00016
cytochrome b; Validated
 1-374 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 574.70  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889   1 MNKPLRLKHPLFKIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWII 80
Cdd:MTH00016    1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  81 RTLHANGASMFFICIYLHVGRGIYYSSYMYMHTWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTD 160
Cdd:MTH00016   81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 161 LVQWIWGGFAVDNATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEKIPFHPYFSFKDSITIISMTSLL 240
Cdd:MTH00016  161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 241 IMLCLINPYMLSDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTYFRGIQFYP 320
Cdd:MTH00016  241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1896069889 321 MNQIMFWIMVTTVVLLTWIGKRPVEEPYILTGQLLTTMYFSYFIMNIHISLMWE 374
Cdd:MTH00016  321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWD 374
CYTB MTH00034
cytochrome b; Validated
 4-364 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 536.98  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889   4 PLRLKHPLFKIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTL 83
Cdd:MTH00034    3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  84 HANGASMFFICIYLHVGRGIYYSSYMYMHTWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQ 163
Cdd:MTH00034   83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 164 WIWGGFAVDNATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEKIPFHPYFSFKDSITIISMTSLLIML 243
Cdd:MTH00034  163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 244 CLINPYMLSDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTYFRGIQFYPMNQ 323
Cdd:MTH00034  243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1896069889 324 IMFWIMVTTVVLLTWIGKRPVEEPYILTGQLLTTMYFSYFI 364
Cdd:MTH00034  323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFL 363
CYTB MTH00224
cytochrome b; Provisional
 1-374 0e+00

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 515.24  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889   1 MNKPLRLKHPLFKIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWII 80
Cdd:MTH00224    1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  81 RTLHANGASMFFICIYLHVGRGIYYSSYMYMHTWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTD 160
Cdd:MTH00224   81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 161 LVQWIWGGFAVDNATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEKIPFHPYFSFKDSITIISMTSLL 240
Cdd:MTH00224  161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 241 IMLCLINPYMLSDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTYFRGIQFYP 320
Cdd:MTH00224  241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1896069889 321 MNQIMFWIMVTTVVLLTWIGKRPVEEPYILTGQLLTTMYFSYFIMNIHISLMWE 374
Cdd:MTH00224  321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWD 374
CYTB MTH00022
cytochrome b; Validated
 4-367 3.72e-173

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 487.29  E-value: 3.72e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889   4 PLRLKHPLFKIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTL 83
Cdd:MTH00022    2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  84 HANGASMFFICIYLHVGRGIYYSSYMYMHTWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQ 163
Cdd:MTH00022   82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 164 WIWGGFAVDNATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEKIPFHPYFSFKDSITIISMTSLLIML 243
Cdd:MTH00022  162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 244 CLINPYMLSDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTYFRGIQFYPMNQ 323
Cdd:MTH00022  242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1896069889 324 IMFWIMVTTVVLLTWIGKRPVEEPYILTGQLLTTMYFSYFIMNI 367
Cdd:MTH00022  322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLI 365
CYTB MTH00053
cytochrome b; Provisional
 1-374 3.50e-170

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 479.97  E-value: 3.50e-170
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889   1 MNKPLRLKHPLFKIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWII 80
Cdd:MTH00053    1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  81 RTLHANGASMFFICIYLHVGRGIYYSSYMYMHTWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTD 160
Cdd:MTH00053   81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 161 LVQWIWGGFAVDNATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEKIPFHPYFSFKDSITIISMTSLL 240
Cdd:MTH00053  161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 241 IMLCLINPYMLSDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTYFRGIQFYP 320
Cdd:MTH00053  241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1896069889 321 MNQIMFWIMVTTVVLLTWIGKRPVEEPYILTGQLLTTMYFSYFIMNIHISLMWE 374
Cdd:MTH00053  321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLE 374
CYTB MTH00033
cytochrome b; Provisional
 17-365 9.79e-131

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 379.67  E-value: 9.79e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  17 HSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTLHANGASMFFICIY 96
Cdd:MTH00033   13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  97 LHVGRGIYYSSYMYMHTWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQWIWGGFAVDNATL 176
Cdd:MTH00033   93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 177 NRFFTFHFMMPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEKIPFHPYFSFKDSITIISMTSLLIMLClINPY---MLSD 253
Cdd:MTH00033  173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIG-IEPRietLLQD 251

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 254 PDNFIPANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTYFRGIQFYPMNQIMFWIMVTTV 333
Cdd:MTH00033  252 PENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDF 331

                         330       340       350
                  ....*....|....*....|....*....|...
gi 1896069889 334 VLLTWIGKRPV-EEPYILTGQLLTTMYFSYFIM 365
Cdd:MTH00033  332 IILTWIGSAPAgADPYVLIGRIATIFYFGYFLV 364
CYTB MTH00086
cytochrome b; Provisional
 13-365 1.30e-121

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 355.40  E-value: 1.30e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  13 KIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTLHANGASMFF 92
Cdd:MTH00086    1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  93 ICIYLHVGRGIYYSSYMYMHTWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQWIWGGFAVD 172
Cdd:MTH00086   81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 173 NATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEKIPFHPYFSFKDSITIIsMTSLLIMLCLINPYMLS 252
Cdd:MTH00086  161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNII-FWLVFIIFSLFYPFNLG 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 253 DPDNFIPANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTYfrgIQFYPMNQIMFWIMVTT 332
Cdd:MTH00086  240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYT---SCLNKLNKFLVFSFIVV 316

                         330       340       350
                  ....*....|....*....|....*....|...
gi 1896069889 333 VVLLTWIGKRPVEEPYILTGQLLTTMYFSYFIM 365
Cdd:MTH00086  317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
10-364 7.92e-120

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 352.17  E-value: 7.92e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  10 PLFKIINHSLiDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTLHANGAS 89
Cdd:COG1290    19 PLASLVREHL-EYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  90 MFFICIYLHVGRGIYYSSYMYMH--TWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQWIWG 167
Cdd:COG1290    98 LFFAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 168 GFAVDNATLNRFFTFHFM-MPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEK----IPFHPYFSFKDSITIisMTSLLIM 242
Cdd:COG1290   178 GEFPGDATLNRFFALHVLlLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGF--FVFLGVF 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 243 LCLINPYMLSDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIP--NKLGGVIALFLSISILMILPFYNKTYFRGIQFYP 320
Cdd:COG1290   256 ALLAFFFPINPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1896069889 321 MNQIMFWIMVTTVVLLTWIGKRPveEPYILTGQLLTTMYFSYFI 364
Cdd:COG1290   336 VRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFL 377
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-207 1.28e-83

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 253.06  E-value: 1.28e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  10 PLFKIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTLHANGAS 89
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  90 MFFICIYLHVGRGIYYSSYMYMH--TWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQWIWG 167
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1896069889 168 GFAVDNATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSN 207
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
CYTB MTH00046
cytochrome b; Validated
 13-358 1.02e-79

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 248.36  E-value: 1.02e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  13 KIINHSLIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTLHANGASMFF 92
Cdd:MTH00046    3 SLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  93 ICIYLHVGRGIYYSSYMYMHTWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQWIWGGFAVD 172
Cdd:MTH00046   83 ILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVT 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 173 NATLNRFFTFHFMMPFMIAAMVMIHLLFLHQMGSNNPLGINSNI-EKIPFHPYFSFKDSITIISMTSLLIMLCLINPYML 251
Cdd:MTH00046  163 GVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLV 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 252 SDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIaLFLSISILMILPFYNKTYFRGIqfypMNQIMFWIMVT 331
Cdd:MTH00046  243 LDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVPTFNGSSVYSV----WRQVNFWLIVS 317

                         330       340
                  ....*....|....*....|....*..
gi 1896069889 332 TVVLLTWIGKRPVEEPYILTGQLLTTM 358
Cdd:MTH00046  318 LFFSLSYLGGCHPEYPYLLISQLFSVL 344
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-205 3.60e-76

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 233.43  E-value: 3.60e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  19 LIDLPTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTLHANGASMFFICIYLH 98
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  99 VGRGIYYSSYMYMH--TWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQWIWGGFAVDNATL 176
Cdd:pfam00033  81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1896069889 177 NRFFTFHFMMPFMIAAMVMIHLLFLHQMG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 208-354 4.88e-46

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 154.34  E-value: 4.88e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 208 NPLGINSNIEKIPFHPYFSFKDSITIISMTSLLIMLCLINPYMLSDPDNFIPANPLITPIHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290     1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069889 288 KLGGVIALFLSISILMILPFYNKTYFRGiQFYPMNQIMFWIMVTTVVLLTWIGKRPVEEPYILTGQL 354
Cdd:cd00290    81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
89-254 7.12e-43

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 147.00  E-value: 7.12e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  89 SMFFICIYLHVGRGIYYSSYMYMH--TWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQWIW 166
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 167 GGFAVDNATLNRFFTFHFM-MPFMIAAMVMIHLLFLHQMGSNNPLGINSNIEKIPFHPYFSFKDSITIISMTSLLIMLCL 245
Cdd:pfam13631  81 GGPFPGTATIPRFYALHILlLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 1896069889 246 INPYMLSDP 254
Cdd:pfam13631 161 INPIWLGGP 169
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
259-359 8.59e-40

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 136.45  E-value: 8.59e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 259 PANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTYFRGIQFYPMNQIMFWIMVTTVVLLTW 338
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 1896069889 339 IGKRPVEEPYILTGQLLTTMY 359
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
PRK03735 PRK03735
cytochrome b6; Provisional
 23-210 1.06e-35

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 129.83  E-value: 1.06e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  23 PTPMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTLHANGASMFFICIYLHVGRG 102
Cdd:PRK03735   33 PAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRV 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 103 IYYSSYMYMH--TWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQWIWGGFAVDNATLNRFF 180
Cdd:PRK03735  113 FFTGGYKKPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFF 192

                         170       180       190
                  ....*....|....*....|....*....|.
gi 1896069889 181 TFH-FMMPFMIAAMVMIHLLFLHQMGSNNPL 210
Cdd:PRK03735  193 AIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
petB CHL00070
cytochrome b6
 25-210 2.77e-29

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 112.51  E-value: 2.77e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889  25 PMNISFWWNYGSLLGLCLLIQIITGLFLAMHYTPNIEMAFSSIVHISRDVNNGWIIRTLHANGASMFFICIYLHVGRgIY 104
Cdd:CHL00070   27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFR-VY 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896069889 105 YSSYMYMH---TWMAGMIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTDLVQWIWGGFAVDNATLNRFFT 181
Cdd:CHL00070  106 LTGGFKKPrelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYS 185

                         170       180       190
                  ....*....|....*....|....*....|
gi 1896069889 182 FH-FMMPFMIAAMVMIHLLFLHQMGSNNPL 210
Cdd:CHL00070  186 LHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 231-307 3.88e-11

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 60.96  E-value: 3.88e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069889 231 ITIISMTSLLIMLCLINPYMLSDPdnfipANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPF 307
Cdd:COG5679    43 VVILGTIALCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPF 114
petD CHL00058
cytochrome b6/f complex subunit IV
 231-307 2.61e-10

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 58.47  E-value: 2.61e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069889 231 ITIISMTSLLIMLCLINPYMLSDPdnfipANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPF 307
Cdd:CHL00058   42 VVILGTIACNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPF 113
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 231-307 2.58e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 55.57  E-value: 2.58e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1896069889 231 ITIISMTSLLIMLCLINPYMLSDPdnfipANPLITPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPF 307
Cdd:TIGR01156  42 VVILGTIACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPF 113
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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