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Conserved domains on  [gi|189438619|gb|EDV07604|]
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hypothetical protein BACINT_00381 [Bacteroides intestinalis DSM 17393]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CpxP super family cl43930
Periplasmic chaperone Spy, Spy/CpxP family [Posttranslational modification, protein turnover, ...
 1-82 5.36e-03

Periplasmic chaperone Spy, Spy/CpxP family [Posttranslational modification, protein turnover, chaperones];


The actual alignment was detected with superfamily member COG3678:

Pssm-ID: 442894 [Multi-domain]  Cd Length: 141  Bit Score: 34.19  E-value: 5.36e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189438619   1 MKRLGLTLMAAVCLTATTFAAGNQPTTAKWDGNINVTKLSKYLNLSADQHEEVANICDYFSTQMERATTAKKDQKKKLHN 80
Cdd:COG3678    1 MKLKLLALLLALALALGAASAFAAGPPGGPRGGRGLRRMLEGLNLTEEQRQQIRAIRQQYRKQMRALRQQLREAREELRA 80


                 ..
gi 189438619  81 AV 82
Cdd:COG3678   81 LL 82
 
Name Accession Description Interval E-value
CpxP COG3678
Periplasmic chaperone Spy, Spy/CpxP family [Posttranslational modification, protein turnover, ...
 1-82 5.36e-03

Periplasmic chaperone Spy, Spy/CpxP family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 442894 [Multi-domain]  Cd Length: 141  Bit Score: 34.19  E-value: 5.36e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189438619   1 MKRLGLTLMAAVCLTATTFAAGNQPTTAKWDGNINVTKLSKYLNLSADQHEEVANICDYFSTQMERATTAKKDQKKKLHN 80
Cdd:COG3678    1 MKLKLLALLLALALALGAASAFAAGPPGGPRGGRGLRRMLEGLNLTEEQRQQIRAIRQQYRKQMRALRQQLREAREELRA 80


                 ..
gi 189438619  81 AV 82
Cdd:COG3678   81 LL 82
 
Name Accession Description Interval E-value
CpxP COG3678
Periplasmic chaperone Spy, Spy/CpxP family [Posttranslational modification, protein turnover, ...
 1-82 5.36e-03

Periplasmic chaperone Spy, Spy/CpxP family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 442894 [Multi-domain]  Cd Length: 141  Bit Score: 34.19  E-value: 5.36e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189438619   1 MKRLGLTLMAAVCLTATTFAAGNQPTTAKWDGNINVTKLSKYLNLSADQHEEVANICDYFSTQMERATTAKKDQKKKLHN 80
Cdd:COG3678    1 MKLKLLALLLALALALGAASAFAAGPPGGPRGGRGLRRMLEGLNLTEEQRQQIRAIRQQYRKQMRALRQQLREAREELRA 80


                 ..
gi 189438619  81 AV 82
Cdd:COG3678   81 LL 82
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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