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Conserved domains on  [gi|1893869132|gb|QNH68990|]
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ATP synthase F0 subunit 6 [Mazarredia convexa]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-223 4.81e-85

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 251.24  E-value: 4.81e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132   1 MMTNLFSTFDPSTSSSTSLNWMSNLILFIVIPPTFWMMNSRAYMMLKYTLMKLNSEFNMVMNYTNKSSIMMFLSIFIMLL 80
Cdd:MTH00157    1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  81 VNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESISNMIRPGTLAIRL 160
Cdd:MTH00157   81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1893869132 161 AANMIAGHLLLILLGNMGSKINEFMMMTIILIQTLLLMLELAVSMIQAYVFSVLTSLYSSEIN 223
Cdd:MTH00157  161 AANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-223 4.81e-85

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 251.24  E-value: 4.81e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132   1 MMTNLFSTFDPSTSSSTSLNWMSNLILFIVIPPTFWMMNSRAYMMLKYTLMKLNSEFNMVMNYTNKSSIMMFLSIFIMLL 80
Cdd:MTH00157    1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  81 VNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESISNMIRPGTLAIRL 160
Cdd:MTH00157   81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1893869132 161 AANMIAGHLLLILLGNMGSKINEFMMMTIILIQTLLLMLELAVSMIQAYVFSVLTSLYSSEIN 223
Cdd:MTH00157  161 AANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-223 8.07e-47

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 154.29  E-value: 8.07e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132   5 LFSTFDPSTSSSTSLNWMSN------LILFIVIPPTFWMMNSRAYMMLKYTLMKLNSEFNMVMNYTNKSSIMMFLSIFIM 78
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLilllslLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  79 LLVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESISNMIRPGTLAI 158
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1893869132 159 RLAANMIAGHLLLILLGNMGSKINEFMMMTI-ILIQTLLLMLELAVSMIQAYVFSVLTSLYSSEIN 223
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSSAIFALlLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 65-220 1.05e-44

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 146.39  E-value: 1.05e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  65 NKSSIMMFLSIFIMLLVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCI 144
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1893869132 145 ESISNMIRPGTLAIRLAANMIAGHLLLILLGNMGSKINEFMMMTIILIQTLLLMLELAVSMIQAYVFSVLTSLYSS 220
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
71-220 2.62e-30

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 111.43  E-value: 2.62e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  71 MFLSIFIMLLVNNMMGLF---PYIFTSTSHLTMTISMALPMWLSFNLYG-WMNKTNHMFEHLLPSGTPAILMPFMVCIES 146
Cdd:pfam00119  60 LLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEI 139

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1893869132 147 ISNMIRPGTLAIRLAANMIAGHLLLILLGNMGSKINEFMMMTII---LIQTLLLMLELAVSMIQAYVFSVLTSLYSS 220
Cdd:pfam00119 140 ISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVippLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 71-218 6.41e-26

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 99.76  E-value: 6.41e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  71 MFLSIFIMLLVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYG-WMNKTNHMFEHLLPSGTPAiLMPFMVCIESISN 149
Cdd:COG0356    60 LLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFPW-LAPLMLPIEIISE 138

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1893869132 150 MIRPGTLAIRLAANMIAGHLLLILLGNMGSKIneFMMMTIILIQTLLLMLELAVSMIQAYVFSVLTSLY 218
Cdd:COG0356   139 LARPLSLSLRLFGNMFAGHIILLLLAGLAPFL--LLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-223 4.81e-85

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 251.24  E-value: 4.81e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132   1 MMTNLFSTFDPSTSSSTSLNWMSNLILFIVIPPTFWMMNSRAYMMLKYTLMKLNSEFNMVMNYTNKSSIMMFLSIFIMLL 80
Cdd:MTH00157    1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  81 VNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESISNMIRPGTLAIRL 160
Cdd:MTH00157   81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1893869132 161 AANMIAGHLLLILLGNMGSKINEFMMMTIILIQTLLLMLELAVSMIQAYVFSVLTSLYSSEIN 223
Cdd:MTH00157  161 AANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-223 8.07e-47

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 154.29  E-value: 8.07e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132   5 LFSTFDPSTSSSTSLNWMSN------LILFIVIPPTFWMMNSRAYMMLKYTLMKLNSEFNMVMNYTNKSSIMMFLSIFIM 78
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLilllslLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  79 LLVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESISNMIRPGTLAI 158
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1893869132 159 RLAANMIAGHLLLILLGNMGSKINEFMMMTI-ILIQTLLLMLELAVSMIQAYVFSVLTSLYSSEIN 223
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSSAIFALlLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 65-220 1.05e-44

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 146.39  E-value: 1.05e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  65 NKSSIMMFLSIFIMLLVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCI 144
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1893869132 145 ESISNMIRPGTLAIRLAANMIAGHLLLILLGNMGSKINEFMMMTIILIQTLLLMLELAVSMIQAYVFSVLTSLYSS 220
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-221 9.28e-42

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 141.32  E-value: 9.28e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132   1 MMTNLFSTFDPSTS---SSTSLNWMSNLILFIVIPPTFWMMNSRAYMMLKYTLMKLNSEFNMVMNYTNKSSIMMFLSIFI 77
Cdd:MTH00176    1 MLVDLFSSFDPPNKnifSMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  78 MLLVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESISNMIRPGTLA 157
Cdd:MTH00176   81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1893869132 158 IRLAANMIAGHLLLILLGNMGSKINEFM---MMTIILIQTLLLMLELAVSMIQAYVFSVLTSLYSSE 221
Cdd:MTH00176  161 VRLAANLSAGHLLLGLLGAAMWGLLPVSpliGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDE 227
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-221 8.60e-40

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 136.40  E-value: 8.60e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132   1 MMTNLFSTFDPSTSS-----STSLNWMSNLILFIVIPPTFWMMNSRAYMMLKYTLMKLNSEFNMVMNYTNKSSIMMFLSI 75
Cdd:MTH00005    1 MLTDIFSSFDPATNSlfnnlSSTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISAL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  76 FIMLLVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESISNMIRPGT 155
Cdd:MTH00005   81 FTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPIT 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1893869132 156 LAIRLAANMIAGHLLLILLGNMGSKI---NEFMMMTIILIQTLLLMLELAVSMIQAYVFSVLTSLYSSE 221
Cdd:MTH00005  161 LSFRLAANMSAGHIVLSLIGIYAASAlfsSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-222 2.17e-39

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 135.38  E-value: 2.17e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132   1 MMTNLFSTFDPSTSSSTSLN---WMSNLILFIVIPPTFWMMNSRAYMMLKYTLMKLNSEFNMVMNYTNKSSIMMFLSIFI 77
Cdd:MTH00173    1 MMVDLFSSFDDHNSSFSSLSflmWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  78 MLLVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESISNMIRPGTLA 157
Cdd:MTH00173   81 FLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLT 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1893869132 158 IRLAANMIAGHLLLILLGNMGSK----INEFMMMTIILIQTLLLMLELAVSMIQAYVFSVLTSLYSSEI 222
Cdd:MTH00173  161 VRLLANISAGHIVLTLIGNYLSSslfsSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDEH 229
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-221 1.79e-38

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 132.79  E-value: 1.79e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132   3 TNLFSTFDPSTSSSTSLNWMS---NLILFIVIPPTFWMMNSRAYMMLKYTLMKLNSEFNMvMNYTNKSSIMMFLSIFIML 79
Cdd:MTH00035    5 NSIFGQFSPDTILFIPLTLLSsviALSWLFFINPTNWLPSRSQSIWLTFRQEILKLIFQN-TNPNTAPWAGLLTTVFILI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  80 LVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESISNMIRPGTLAIR 159
Cdd:MTH00035   84 LSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLR 163

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1893869132 160 LAANMIAGHLLLILLGN-MGSKINEFMMMTIIL-IQTLLLMLELAVSMIQAYVFSVLTSLYSSE 221
Cdd:MTH00035  164 LAANLTAGHLLIFLLSTaIWELSNSPLISIITLiIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-221 7.54e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 131.22  E-value: 7.54e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132   1 MMTNLFSTFDPSTSSSTSLNWMSNLILF-IVIPPTFWMMNSRAYMMLKYTLMKLNSEFNMVMNYTNKSSIMMFLSIFIML 79
Cdd:MTH00179    1 MMLSMFDQFESPSLLGIPLLALALLLPWlLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  80 LVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESISNMIRPGTLAIR 159
Cdd:MTH00179   81 LTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1893869132 160 LAANMIAGHLLLILLGNMGSKINEFMMM---TIILIQTLLLMLELAVSMIQAYVFSVLTSLYSSE 221
Cdd:MTH00179  161 LTANITAGHLLMHLISSAVFVLMNFMGMvalLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-221 1.49e-36

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 128.02  E-value: 1.49e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132   1 MMTNLFSTFDPSTSSSTSLNWMSNLILFIVIP-PTFWMMNSRAYMMLKYTLMKLNSEFNMVMNYTNKSSIMMFLSIFIML 79
Cdd:MTH00120    1 MNLNFFDQFSSPELLGIPLILLAMLIPALLIPsPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  80 LVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESISNMIRPGTLAIR 159
Cdd:MTH00120   81 LLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1893869132 160 LAANMIAGHLLLIL-----LGNMGSKINEFMMMTIILIqtLLLMLELAVSMIQAYVFSVLTSLYSSE 221
Cdd:MTH00120  161 LTANLTAGHLLIQListatLNLLPTMPTLSLLTLIILL--LLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 70-221 3.75e-36

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 126.91  E-value: 3.75e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  70 MMFLSIFIMLLVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESISN 149
Cdd:MTH00132   71 LLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1893869132 150 MIRPGTLAIRLAANMIAGHLLLILLGNMGSKINEFMMMTIILIQTLLLM---LELAVSMIQAYVFSVLTSLYSSE 221
Cdd:MTH00132  151 FIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLltlLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-221 4.56e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 121.61  E-value: 4.56e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132   1 MMTNLFSTFDPSTSSSTSLNWMSNLILFIVIP-PTFWMMNSRAYMMLKYTLMKLNSEFNMVMNYTNKSSIMMFLSIFIML 79
Cdd:MTH00073    1 MNLSFFDQFLSPTLLGIPLIMLAMLLPWLLFPtPTNKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSLMVFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  80 LVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESISNMIRPGTLAIR 159
Cdd:MTH00073   81 ITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1893869132 160 LAANMIAGHLLLILLGNMGSKINEFMMMTIILIQTLLL---MLELAVSMIQAYVFSVLTSLYSSE 221
Cdd:MTH00073  161 LTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFlltLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-218 1.60e-33

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 120.06  E-value: 1.60e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132   1 MMTNLFSTFdpSTSSSTSLNWMSNLILF--IVIPPTFWMMNSRaYMMLKYTLMKLNSEFNMVM-NYTNKSSIMMFLSIFI 77
Cdd:MTH00101    1 MNENLFASF--ITPTILGLPIVTLIIMFpsLLFPTPNRLINNR-LISIQQWLIQLTSKQMMTIhNTKGQTWSLMLMSLIL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  78 MLLVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESISNMIRPGTLA 157
Cdd:MTH00101   78 FIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALA 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1893869132 158 IRLAANMIAGHLLLILLGNMG---SKINEFMMMTIILIQTLLLMLELAVSMIQAYVFSVLTSLY 218
Cdd:MTH00101  158 VRLTANITAGHLLIHLIGGATlalMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP-synt_A pfam00119
ATP synthase A chain;
71-220 2.62e-30

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 111.43  E-value: 2.62e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  71 MFLSIFIMLLVNNMMGLF---PYIFTSTSHLTMTISMALPMWLSFNLYG-WMNKTNHMFEHLLPSGTPAILMPFMVCIES 146
Cdd:pfam00119  60 LLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEI 139

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1893869132 147 ISNMIRPGTLAIRLAANMIAGHLLLILLGNMGSKINEFMMMTII---LIQTLLLMLELAVSMIQAYVFSVLTSLYSS 220
Cdd:pfam00119 140 ISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVippLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 71-218 6.41e-26

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 99.76  E-value: 6.41e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  71 MFLSIFIMLLVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYG-WMNKTNHMFEHLLPSGTPAiLMPFMVCIESISN 149
Cdd:COG0356    60 LLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFPW-LAPLMLPIEIISE 138

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1893869132 150 MIRPGTLAIRLAANMIAGHLLLILLGNMGSKIneFMMMTIILIQTLLLMLELAVSMIQAYVFSVLTSLY 218
Cdd:COG0356   139 LARPLSLSLRLFGNMFAGHIILLLLAGLAPFL--LLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 73-218 4.83e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 98.16  E-value: 4.83e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  73 LSIFIMLLVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESISNMIR 152
Cdd:MTH00175   87 LSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIR 166

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132 153 PGTLAIRLAANMIAGHLLLILLG----NMGSKINEFMMMTIILIQTLLLMLELAVSMIQAYVFSVLTSLY 218
Cdd:MTH00175  167 AISLGVRLAANISAGHLLFAILSgfafNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIY 236
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 73-218 9.17e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 94.72  E-value: 9.17e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  73 LSIFIMLLVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESISNMIR 152
Cdd:MTH00172   76 ISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISR 155

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1893869132 153 PGTLAIRLAANMIAGHLLLILLGNMGSKI---NEFMMMTIILIQTLLLMLELAVSMIQAYVFSVLTSLY 218
Cdd:MTH00172  156 AISLGVRLAANLSAGHLLFAILAGFGFNMlcaSGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIY 224
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 71-218 1.72e-22

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 91.01  E-value: 1.72e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  71 MFLSIFIMLLVNNMMGLFP-YIFTSTSHLTMTISMALPMWLSFNLYG-WMNKTNHMFEHLLPSgtpaiLMPFMVCIESIS 148
Cdd:PRK05815   75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQ-----PHPLLLPIEIIS 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132 149 NMIRPGTLAIRLAANMIAGHLLLILLGNMGSkINEFMMMTIILIQTLLLMLELAVSMIQAYVFSVLTSLY 218
Cdd:PRK05815  150 EFSRPISLSLRLFGNMLAGELILALIALLGG-AGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 73-218 1.66e-16

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 75.75  E-value: 1.66e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  73 LSIFIMLLVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESISNMIR 152
Cdd:MTH00174   95 LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISR 174

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1893869132 153 PGTLAIRLAANMIAGHLLLILLG-------NMGSKINEFMMMTIILIQTLllmLELAVSMIQAYVFSVLTSLY 218
Cdd:MTH00174  175 AISLGVRLAANISSGHLLFSIIAsfawkmiNTGILIGSFVPFAILIFVTI---LEMAVAIIQAYVFTLLTIVY 244
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 73-218 3.46e-13

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 67.46  E-value: 3.46e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  73 LSIFIMLLVNNMMGLFPYIFTSTSHLTMTISMALPMWL-----SFNLYGWMNKTNHmfehlLPSGTPAILMPFMVCIESI 147
Cdd:PRK13419  175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFitqyaAIKAHGIKGYLAH-----LTGGTHWSLWIIMIPIEFI 249

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1893869132 148 SNMIRPGTLAIRLAANMIAGHL----LLILLGNMGSKINEFMMMTIILIqtLLLMLELAVSMIQAYVFSVLTSLY 218
Cdd:PRK13419  250 GLFTKPFALTVRLFANMTAGHIvilsLIFISFILKSYIVAVAVSVPFAI--FIYLLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 44-221 9.76e-11

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 58.84  E-value: 9.76e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  44 MMLKYTLMKLNSEFNMVMNYTNKS--SIMMFLSIFIMLLVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYgwMNKT 121
Cdd:MTH00087   25 SMLNVLVKKFFGLLIIVFSYSNKLplSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLS--FLSK 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132 122 NHMFEHLLPSGTPAILMPF-MVCIESISNMIRPGTLAIRLAANMIAGHLLLILLGNMGSKineFMMMTIILIqtlllMLE 200
Cdd:MTH00087  103 SEKFSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTLRLTVNLMVGHLISSLLNFLGEK---YVWLSILAI-----MME 174

                         170       180
                  ....*....|....*....|.
gi 1893869132 201 LAVSMIQAYVFSVLTSLYSSE 221
Cdd:MTH00087  175 CFVAFIQSYIFSRLIYLYLNE 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 93-218 7.28e-09

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 54.90  E-value: 7.28e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  93 TSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHLLPSGTPAILMPFMVCIESI-SNMIRPGTLAIRLAANMIAGH-LL 170
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHvII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1893869132 171 LILLGNMGSKINEFMMMTIILIQTLLLMLELAVSMIQAYVFSVLTSLY 218
Cdd:PRK13417  297 LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 74-218 9.50e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 47.81  E-value: 9.50e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  74 SIFIMLLVNNMMGLFPYIFTSTSHLTMTISMALPMWLSFNLYGWMNK--TNHMFEHLLPSgtpAILMPFMVciesISNMI 151
Cdd:PRK13420   80 TLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGIRAEglREYLKHYLSPS---PFLLPFHL----ISEIT 152

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1893869132 152 RPGTLAIRLAANMIAGHLLLILLgnmgskinefMMMTIILIQTLLLMLELAVSMIQAYVFSVLTSLY 218
Cdd:PRK13420  153 RTLALAVRLFGNIMSLELAALLV----------LLVAGFLVPVPILMLHIIEALVQAYIFGMLALIY 209
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 54-191 1.89e-06

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 46.42  E-value: 1.89e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1893869132  54 NSEFNMVMNYTNKSSIMMFLSIFIMLLVNNMMGLF-----PYIFTSTSHLTMTISMALPMWLSFNLYGWMNKTNHMFEHL 128
Cdd:MTH00050    3 VNDFSSLFSLIYKLILGGSVSYYYSVVLFIVLFLFllyrlPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSF 82

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1893869132 129 LPSGTPAILMPFMVCIESISNMIRPGTLAIRLAANMIAGHLLLILLGNMGSKINEFMMMTIIL 191
Cdd:MTH00050   83 VPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLGCFGGVALGNLCFISYWWFLVLFFL 145
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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