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complement component C6 precursor [Homo sapiens]
List of domain hits
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Name | Accession | Description | Interval | E-value | ||||
MACPF | smart00457 | membrane-attack complex / perforin; |
313-514 | 1.02e-59 | ||||
membrane-attack complex / perforin; : Pssm-ID: 214671 Cd Length: 195 Bit Score: 202.28 E-value: 1.02e-59
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FIMAC | smart00057 | factor I membrane attack complex; |
862-934 | 3.95e-20 | ||||
factor I membrane attack complex; : Pssm-ID: 214493 [Multi-domain] Cd Length: 68 Bit Score: 84.90 E-value: 3.95e-20
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FIMAC | smart00057 | factor I membrane attack complex; |
768-839 | 2.83e-19 | ||||
factor I membrane attack complex; : Pssm-ID: 214493 [Multi-domain] Cd Length: 68 Bit Score: 82.59 E-value: 2.83e-19
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
568-623 | 2.02e-10 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. : Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 56.83 E-value: 2.02e-10
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LDLa | cd00112 | Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central ... |
142-173 | 2.14e-09 | ||||
Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about 40 amino acids are present in the N-terminal of this multidomain membrane protein; other homologous domains occur in related receptors, including the very low-density lipoprotein receptor and the LDL receptor-related protein/alpha 2-macroglobulin receptor, and in proteins which are functionally unrelated, such as the C9 component of complement; the binding of calcium is required for in vitro formation of the native disulfide isomer and is necessary in establishing and maintaining the modular structure : Pssm-ID: 238060 Cd Length: 35 Bit Score: 53.36 E-value: 2.14e-09
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CCP | cd00033 | Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ... |
644-700 | 3.56e-09 | ||||
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function. : Pssm-ID: 153056 [Multi-domain] Cd Length: 57 Bit Score: 53.62 E-value: 3.56e-09
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PHA02831 super family | cl31511 | EEV host range protein; Provisional |
644-766 | 4.38e-09 | ||||
EEV host range protein; Provisional The actual alignment was detected with superfamily member PHA02831: Pssm-ID: 165176 [Multi-domain] Cd Length: 268 Bit Score: 58.47 E-value: 4.38e-09
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
26-79 | 1.31e-07 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. : Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 49.12 E-value: 1.31e-07
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
85-133 | 7.48e-05 | ||||
Thrombospondin type 1 domain; : Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 40.86 E-value: 7.48e-05
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Name | Accession | Description | Interval | E-value | ||||
MACPF | smart00457 | membrane-attack complex / perforin; |
313-514 | 1.02e-59 | ||||
membrane-attack complex / perforin; Pssm-ID: 214671 Cd Length: 195 Bit Score: 202.28 E-value: 1.02e-59
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MACPF | pfam01823 | MAC/Perforin domain; The membrane-attack complex (MAC) of the complement system forms ... |
294-514 | 2.25e-54 | ||||
MAC/Perforin domain; The membrane-attack complex (MAC) of the complement system forms transmembrane channels. These channels disrupt the phospholipid bilayer of target cells, leading to cell lysis and death. A number of proteins participate in the assembly of the MAC. Freshly activated C5b binds to C6 to form a C5b-6 complex, then to C7 forming the C5b-7 complex. The C5b-7 complex binds to C8, which is composed of three chains (alpha, beta, and gamma), thus forming the C5b-8 complex. C5b-8 subsequently binds to C9 and acts as a catalyst in the polymerization of C9. Active MAC has a subunit composition of C5b-C6-C7-C8-C9{n}. Perforin is a protein found in cytolytic T-cell and killer cells. In the presence of calcium, perforin polymerizes into transmembrane tubules and is capable of lysing, non-specifically, a variety of target cells. There are a number of regions of similarity in the sequences of complement components C6, C7, C8-alpha, C8-beta, C9 and perforin. The X-ray crystal structure of a MACPF domain reveals that it shares a common fold with bacterial cholesterol dependent cytolysins (pfam01289) such as perfringolysin O. Three key pieces of evidence suggests that MACPF domains and CDCs are homologous: Functional similarity (pore formation), conservation of three glycine residues at a hinge in both families and conservation of a complex core fold. Pssm-ID: 460349 Cd Length: 211 Bit Score: 188.00 E-value: 2.25e-54
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FIMAC | smart00057 | factor I membrane attack complex; |
862-934 | 3.95e-20 | ||||
factor I membrane attack complex; Pssm-ID: 214493 [Multi-domain] Cd Length: 68 Bit Score: 84.90 E-value: 3.95e-20
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FIMAC | smart00057 | factor I membrane attack complex; |
768-839 | 2.83e-19 | ||||
factor I membrane attack complex; Pssm-ID: 214493 [Multi-domain] Cd Length: 68 Bit Score: 82.59 E-value: 2.83e-19
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
568-623 | 2.02e-10 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 56.83 E-value: 2.02e-10
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LDLa | cd00112 | Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central ... |
142-173 | 2.14e-09 | ||||
Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about 40 amino acids are present in the N-terminal of this multidomain membrane protein; other homologous domains occur in related receptors, including the very low-density lipoprotein receptor and the LDL receptor-related protein/alpha 2-macroglobulin receptor, and in proteins which are functionally unrelated, such as the C9 component of complement; the binding of calcium is required for in vitro formation of the native disulfide isomer and is necessary in establishing and maintaining the modular structure Pssm-ID: 238060 Cd Length: 35 Bit Score: 53.36 E-value: 2.14e-09
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CCP | cd00033 | Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ... |
644-700 | 3.56e-09 | ||||
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function. Pssm-ID: 153056 [Multi-domain] Cd Length: 57 Bit Score: 53.62 E-value: 3.56e-09
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Ldl_recept_a | pfam00057 | Low-density lipoprotein receptor domain class A; |
142-173 | 3.74e-09 | ||||
Low-density lipoprotein receptor domain class A; Pssm-ID: 395011 Cd Length: 37 Bit Score: 52.64 E-value: 3.74e-09
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PHA02831 | PHA02831 | EEV host range protein; Provisional |
644-766 | 4.38e-09 | ||||
EEV host range protein; Provisional Pssm-ID: 165176 [Multi-domain] Cd Length: 268 Bit Score: 58.47 E-value: 4.38e-09
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CCP | smart00032 | Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ... |
644-699 | 2.73e-08 | ||||
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII. Pssm-ID: 214478 [Multi-domain] Cd Length: 56 Bit Score: 50.99 E-value: 2.73e-08
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LDLa | smart00192 | Low-density lipoprotein receptor domain class A; Cysteine-rich repeat in the low-density ... |
142-170 | 7.50e-08 | ||||
Low-density lipoprotein receptor domain class A; Cysteine-rich repeat in the low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. The N-terminal type A repeats in LDL receptor bind the lipoproteins. Other homologous domains occur in related receptors, including the very low-density lipoprotein receptor and the LDL receptor-related protein/alpha 2-macroglobulin receptor, and in proteins which are functionally unrelated, such as the C9 component of complement. Mutations in the LDL receptor gene cause familial hypercholesterolemia. Pssm-ID: 197566 Cd Length: 33 Bit Score: 49.17 E-value: 7.50e-08
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Sushi | pfam00084 | Sushi repeat (SCR repeat); |
644-699 | 7.85e-08 | ||||
Sushi repeat (SCR repeat); Pssm-ID: 459664 [Multi-domain] Cd Length: 56 Bit Score: 49.81 E-value: 7.85e-08
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
26-79 | 1.31e-07 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 49.12 E-value: 1.31e-07
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PHA02927 | PHA02927 | secreted complement-binding protein; Provisional |
644-755 | 1.55e-07 | ||||
secreted complement-binding protein; Provisional Pssm-ID: 222943 [Multi-domain] Cd Length: 263 Bit Score: 53.89 E-value: 1.55e-07
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TSP1_spondin | pfam19028 | Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
28-78 | 7.36e-07 | ||||
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain. Pssm-ID: 465948 Cd Length: 52 Bit Score: 46.89 E-value: 7.36e-07
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CCP | smart00032 | Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ... |
704-755 | 1.42e-05 | ||||
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII. Pssm-ID: 214478 [Multi-domain] Cd Length: 56 Bit Score: 43.28 E-value: 1.42e-05
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CCP | cd00033 | Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ... |
704-762 | 1.60e-05 | ||||
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function. Pssm-ID: 153056 [Multi-domain] Cd Length: 57 Bit Score: 43.22 E-value: 1.60e-05
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
85-133 | 7.48e-05 | ||||
Thrombospondin type 1 domain; Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 40.86 E-value: 7.48e-05
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PTZ00441 | PTZ00441 | sporozoite surface protein 2 (SSP2); Provisional |
29-80 | 1.51e-04 | ||||
sporozoite surface protein 2 (SSP2); Provisional Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 45.34 E-value: 1.51e-04
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Sushi | pfam00084 | Sushi repeat (SCR repeat); |
722-754 | 8.93e-04 | ||||
Sushi repeat (SCR repeat); Pssm-ID: 459664 [Multi-domain] Cd Length: 56 Bit Score: 38.25 E-value: 8.93e-04
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TSP1_spondin | pfam19028 | Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
571-623 | 4.93e-03 | ||||
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain. Pssm-ID: 465948 Cd Length: 52 Bit Score: 36.10 E-value: 4.93e-03
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Name | Accession | Description | Interval | E-value | ||||
MACPF | smart00457 | membrane-attack complex / perforin; |
313-514 | 1.02e-59 | ||||
membrane-attack complex / perforin; Pssm-ID: 214671 Cd Length: 195 Bit Score: 202.28 E-value: 1.02e-59
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MACPF | pfam01823 | MAC/Perforin domain; The membrane-attack complex (MAC) of the complement system forms ... |
294-514 | 2.25e-54 | ||||
MAC/Perforin domain; The membrane-attack complex (MAC) of the complement system forms transmembrane channels. These channels disrupt the phospholipid bilayer of target cells, leading to cell lysis and death. A number of proteins participate in the assembly of the MAC. Freshly activated C5b binds to C6 to form a C5b-6 complex, then to C7 forming the C5b-7 complex. The C5b-7 complex binds to C8, which is composed of three chains (alpha, beta, and gamma), thus forming the C5b-8 complex. C5b-8 subsequently binds to C9 and acts as a catalyst in the polymerization of C9. Active MAC has a subunit composition of C5b-C6-C7-C8-C9{n}. Perforin is a protein found in cytolytic T-cell and killer cells. In the presence of calcium, perforin polymerizes into transmembrane tubules and is capable of lysing, non-specifically, a variety of target cells. There are a number of regions of similarity in the sequences of complement components C6, C7, C8-alpha, C8-beta, C9 and perforin. The X-ray crystal structure of a MACPF domain reveals that it shares a common fold with bacterial cholesterol dependent cytolysins (pfam01289) such as perfringolysin O. Three key pieces of evidence suggests that MACPF domains and CDCs are homologous: Functional similarity (pore formation), conservation of three glycine residues at a hinge in both families and conservation of a complex core fold. Pssm-ID: 460349 Cd Length: 211 Bit Score: 188.00 E-value: 2.25e-54
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FIMAC | smart00057 | factor I membrane attack complex; |
862-934 | 3.95e-20 | ||||
factor I membrane attack complex; Pssm-ID: 214493 [Multi-domain] Cd Length: 68 Bit Score: 84.90 E-value: 3.95e-20
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FIMAC | smart00057 | factor I membrane attack complex; |
768-839 | 2.83e-19 | ||||
factor I membrane attack complex; Pssm-ID: 214493 [Multi-domain] Cd Length: 68 Bit Score: 82.59 E-value: 2.83e-19
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
568-623 | 2.02e-10 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 56.83 E-value: 2.02e-10
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LDLa | cd00112 | Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central ... |
142-173 | 2.14e-09 | ||||
Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about 40 amino acids are present in the N-terminal of this multidomain membrane protein; other homologous domains occur in related receptors, including the very low-density lipoprotein receptor and the LDL receptor-related protein/alpha 2-macroglobulin receptor, and in proteins which are functionally unrelated, such as the C9 component of complement; the binding of calcium is required for in vitro formation of the native disulfide isomer and is necessary in establishing and maintaining the modular structure Pssm-ID: 238060 Cd Length: 35 Bit Score: 53.36 E-value: 2.14e-09
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CCP | cd00033 | Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ... |
644-700 | 3.56e-09 | ||||
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function. Pssm-ID: 153056 [Multi-domain] Cd Length: 57 Bit Score: 53.62 E-value: 3.56e-09
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Ldl_recept_a | pfam00057 | Low-density lipoprotein receptor domain class A; |
142-173 | 3.74e-09 | ||||
Low-density lipoprotein receptor domain class A; Pssm-ID: 395011 Cd Length: 37 Bit Score: 52.64 E-value: 3.74e-09
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PHA02831 | PHA02831 | EEV host range protein; Provisional |
644-766 | 4.38e-09 | ||||
EEV host range protein; Provisional Pssm-ID: 165176 [Multi-domain] Cd Length: 268 Bit Score: 58.47 E-value: 4.38e-09
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CCP | smart00032 | Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ... |
644-699 | 2.73e-08 | ||||
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII. Pssm-ID: 214478 [Multi-domain] Cd Length: 56 Bit Score: 50.99 E-value: 2.73e-08
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LDLa | smart00192 | Low-density lipoprotein receptor domain class A; Cysteine-rich repeat in the low-density ... |
142-170 | 7.50e-08 | ||||
Low-density lipoprotein receptor domain class A; Cysteine-rich repeat in the low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. The N-terminal type A repeats in LDL receptor bind the lipoproteins. Other homologous domains occur in related receptors, including the very low-density lipoprotein receptor and the LDL receptor-related protein/alpha 2-macroglobulin receptor, and in proteins which are functionally unrelated, such as the C9 component of complement. Mutations in the LDL receptor gene cause familial hypercholesterolemia. Pssm-ID: 197566 Cd Length: 33 Bit Score: 49.17 E-value: 7.50e-08
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Sushi | pfam00084 | Sushi repeat (SCR repeat); |
644-699 | 7.85e-08 | ||||
Sushi repeat (SCR repeat); Pssm-ID: 459664 [Multi-domain] Cd Length: 56 Bit Score: 49.81 E-value: 7.85e-08
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TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
26-79 | 1.31e-07 | ||||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 49.12 E-value: 1.31e-07
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PHA02927 | PHA02927 | secreted complement-binding protein; Provisional |
644-755 | 1.55e-07 | ||||
secreted complement-binding protein; Provisional Pssm-ID: 222943 [Multi-domain] Cd Length: 263 Bit Score: 53.89 E-value: 1.55e-07
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TSP1_spondin | pfam19028 | Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
28-78 | 7.36e-07 | ||||
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain. Pssm-ID: 465948 Cd Length: 52 Bit Score: 46.89 E-value: 7.36e-07
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PHA02954 | PHA02954 | EEV membrane glycoprotein; Provisional |
601-753 | 8.75e-06 | ||||
EEV membrane glycoprotein; Provisional Pssm-ID: 165263 [Multi-domain] Cd Length: 317 Bit Score: 48.93 E-value: 8.75e-06
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CCP | smart00032 | Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ... |
704-755 | 1.42e-05 | ||||
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII. Pssm-ID: 214478 [Multi-domain] Cd Length: 56 Bit Score: 43.28 E-value: 1.42e-05
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CCP | cd00033 | Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ... |
704-762 | 1.60e-05 | ||||
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function. Pssm-ID: 153056 [Multi-domain] Cd Length: 57 Bit Score: 43.22 E-value: 1.60e-05
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PHA02639 | PHA02639 | EEV host range protein; Provisional |
644-761 | 2.15e-05 | ||||
EEV host range protein; Provisional Pssm-ID: 165022 [Multi-domain] Cd Length: 295 Bit Score: 47.35 E-value: 2.15e-05
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PHA02817 | PHA02817 | EEV Host range protein; Provisional |
648-755 | 3.79e-05 | ||||
EEV Host range protein; Provisional Pssm-ID: 165167 [Multi-domain] Cd Length: 225 Bit Score: 46.09 E-value: 3.79e-05
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
85-133 | 7.48e-05 | ||||
Thrombospondin type 1 domain; Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 40.86 E-value: 7.48e-05
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PTZ00441 | PTZ00441 | sporozoite surface protein 2 (SSP2); Provisional |
29-80 | 1.51e-04 | ||||
sporozoite surface protein 2 (SSP2); Provisional Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 45.34 E-value: 1.51e-04
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TSP1_spondin | pfam19028 | Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
82-127 | 2.62e-04 | ||||
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain. Pssm-ID: 465948 Cd Length: 52 Bit Score: 39.57 E-value: 2.62e-04
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
29-78 | 5.30e-04 | ||||
Thrombospondin type 1 domain; Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 38.55 E-value: 5.30e-04
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Sushi | pfam00084 | Sushi repeat (SCR repeat); |
722-754 | 8.93e-04 | ||||
Sushi repeat (SCR repeat); Pssm-ID: 459664 [Multi-domain] Cd Length: 56 Bit Score: 38.25 E-value: 8.93e-04
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PHA02954 | PHA02954 | EEV membrane glycoprotein; Provisional |
659-767 | 1.70e-03 | ||||
EEV membrane glycoprotein; Provisional Pssm-ID: 165263 [Multi-domain] Cd Length: 317 Bit Score: 41.61 E-value: 1.70e-03
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TSP1_spondin | pfam19028 | Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ... |
571-623 | 4.93e-03 | ||||
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain. Pssm-ID: 465948 Cd Length: 52 Bit Score: 36.10 E-value: 4.93e-03
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TSP1_ADAMTS | pfam19030 | Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ... |
32-78 | 7.49e-03 | ||||
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins. Pssm-ID: 465950 [Multi-domain] Cd Length: 55 Bit Score: 35.51 E-value: 7.49e-03
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Blast search parameters | ||||
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