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Conserved domains on  [gi|1890924592|gb|QNE19788|]
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DUF2218 domain-containing protein [Kribbella qitaiheensis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2218 super family cl01424
Uncharacterized protein conserved in bacteria (DUF2218); This domain, found in various ...
 3-99 2.52e-20

Uncharacterized protein conserved in bacteria (DUF2218); This domain, found in various hypothetical bacterial proteins, has no known function.


The actual alignment was detected with superfamily member COG3553:

Pssm-ID: 470198  Cd Length: 94  Bit Score: 78.38  E-value: 2.52e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1890924592   3 MTGSEALVVTGRADRYLEQFAKHFAHRpggIQAQLDDDGGlLVDFGGATCRMRATAEGLALSAEAAGAEELGQLQRRLTE 82
Cdd:COG3553     1 MLTSTARVATDNASRYLKQLCKHFAHK---VPVEFDETQG-RIAFPFGTCTLTADDDALTLRLEAEDAEQLERLEDVVAR 76

                          90
                  ....*....|....*..
gi 1890924592  83 RLEQIGRRDGIAVRWNP 99
Cdd:COG3553    77 HLDRFAFREELTVDWQR 93
 
Name Accession Description Interval E-value
COG3553 COG3553
Uncharacterized conserved protein, DUF2218 domain [Function unknown];
3-99 2.52e-20

Uncharacterized conserved protein, DUF2218 domain [Function unknown];


Pssm-ID: 442774  Cd Length: 94  Bit Score: 78.38  E-value: 2.52e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1890924592   3 MTGSEALVVTGRADRYLEQFAKHFAHRpggIQAQLDDDGGlLVDFGGATCRMRATAEGLALSAEAAGAEELGQLQRRLTE 82
Cdd:COG3553     1 MLTSTARVATDNASRYLKQLCKHFAHK---VPVEFDETQG-RIAFPFGTCTLTADDDALTLRLEAEDAEQLERLEDVVAR 76

                          90
                  ....*....|....*..
gi 1890924592  83 RLEQIGRRDGIAVRWNP 99
Cdd:COG3553    77 HLDRFAFREELTVDWQR 93
DUF2218 pfam09981
Uncharacterized protein conserved in bacteria (DUF2218); This domain, found in various ...
 7-98 4.71e-20

Uncharacterized protein conserved in bacteria (DUF2218); This domain, found in various hypothetical bacterial proteins, has no known function.


Pssm-ID: 430963  Cd Length: 88  Bit Score: 77.62  E-value: 4.71e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1890924592   7 EALVVTGRADRYLEQFAKHFAHRpggIQAQLDDDGGLlVDFGGATCRMRATAEGLALSAEAAGAEELGQLQRRLTERLEQ 86
Cdd:pfam09981   1 TARVATPHASRYLKQLCKHFAHK---VPVEFDEETGR-VTFPFGTCTLTAEPDALTLRVEAEDAEDLARLKDVVARHLDR 76

                          90
                  ....*....|..
gi 1890924592  87 IGRRDGIAVRWN 98
Cdd:pfam09981  77 FAFREELDVVWQ 88
 
Name Accession Description Interval E-value
COG3553 COG3553
Uncharacterized conserved protein, DUF2218 domain [Function unknown];
3-99 2.52e-20

Uncharacterized conserved protein, DUF2218 domain [Function unknown];


Pssm-ID: 442774  Cd Length: 94  Bit Score: 78.38  E-value: 2.52e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1890924592   3 MTGSEALVVTGRADRYLEQFAKHFAHRpggIQAQLDDDGGlLVDFGGATCRMRATAEGLALSAEAAGAEELGQLQRRLTE 82
Cdd:COG3553     1 MLTSTARVATDNASRYLKQLCKHFAHK---VPVEFDETQG-RIAFPFGTCTLTADDDALTLRLEAEDAEQLERLEDVVAR 76

                          90
                  ....*....|....*..
gi 1890924592  83 RLEQIGRRDGIAVRWNP 99
Cdd:COG3553    77 HLDRFAFREELTVDWQR 93
DUF2218 pfam09981
Uncharacterized protein conserved in bacteria (DUF2218); This domain, found in various ...
 7-98 4.71e-20

Uncharacterized protein conserved in bacteria (DUF2218); This domain, found in various hypothetical bacterial proteins, has no known function.


Pssm-ID: 430963  Cd Length: 88  Bit Score: 77.62  E-value: 4.71e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1890924592   7 EALVVTGRADRYLEQFAKHFAHRpggIQAQLDDDGGLlVDFGGATCRMRATAEGLALSAEAAGAEELGQLQRRLTERLEQ 86
Cdd:pfam09981   1 TARVATPHASRYLKQLCKHFAHK---VPVEFDEETGR-VTFPFGTCTLTAEPDALTLRVEAEDAEDLARLKDVVARHLDR 76

                          90
                  ....*....|..
gi 1890924592  87 IGRRDGIAVRWN 98
Cdd:pfam09981  77 FAFREELDVVWQ 88
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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