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Conserved domains on  [gi|188502499|gb|ACD55337|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Zaprionus badyi]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 4-92 1.54e-18

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 72.88  E-value: 1.54e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 188502499  4 ILYWSFPMILFILGLFCFVSNRKHLLSMLLSLEYIVLILFFFLFIYLNMLNYENYFSMMFLTF********LSILVSMIR 83
Cdd:MTH00162  1 MMMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIR 80


                ....*....
gi 188502499 84 THGNDYFQS 92
Cdd:MTH00162 81 SHGNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 4-92 1.54e-18

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 72.88  E-value: 1.54e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 188502499  4 ILYWSFPMILFILGLFCFVSNRKHLLSMLLSLEYIVLILFFFLFIYLNMLNYENYFSMMFLTF********LSILVSMIR 83
Cdd:MTH00162  1 MMMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIR 80


                ....*....
gi 188502499 84 THGNDYFQS 92
Cdd:MTH00162 81 SHGNDYFSS 89
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-96 1.61e-05

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 39.85  E-value: 1.61e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 188502499  11 MILFILGLFCFVSnRKHLLSMLLSLEYIVL--ILFFFLFIYLNMLNYENYFSMMFLTF********LSILVSMIRTHGND 88
Cdd:pfam00420  7 GLLFLIGLYGLLL-RRNLLRVLLSLELMLNavNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTD 85


                 ....*...
gi 188502499  89 YFQSFSIM 96
Cdd:pfam00420 86 DVDSLNLL 93
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 4-92 1.54e-18

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 72.88  E-value: 1.54e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 188502499  4 ILYWSFPMILFILGLFCFVSNRKHLLSMLLSLEYIVLILFFFLFIYLNMLNYENYFSMMFLTF********LSILVSMIR 83
Cdd:MTH00162  1 MMMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIR 80


                ....*....
gi 188502499 84 THGNDYFQS 92
Cdd:MTH00162 81 SHGNDYFSS 89
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 2-96 3.66e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 54.21  E-value: 3.66e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 188502499  2 IMILYWSFPMILFILGLFCFVSNRKHLLSMLLSLEYIVLILFFFLFIYLNMLNYENYFSMMFLTF********LSILVSM 81
Cdd:MTH00188  1 MFFSMILVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSL 80

                        90
                ....*....|....*
gi 188502499 82 IRTHGNDYFQSFSIM 96
Cdd:MTH00188 81 IRSHGSDYVSSLNLI 95
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 2-94 3.98e-09

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 49.07  E-value: 3.98e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 188502499  2 IMILYWSFPMILFILGLFCFVSNRKHLLSMLLSLEYIVLILFFFLFIYLNMLNYENYFSMMFLTF********LSILVSM 81
Cdd:MTH00149  1 SMFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSL 80

                        90
                ....*....|...
gi 188502499 82 IRTHGNDYFQSFS 94
Cdd:MTH00149 81 IRLHGNDYVSSLS 93
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 14-96 8.37e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 45.73  E-value: 8.37e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 188502499 14 FILGLFCFVSNRKHLLSMLLSLEYIVLILFFFLFIYLNMLNYENYFS--MMFLTF********LSILVSMIRTHGNDYFQ 91
Cdd:MTH00126 12 FILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAapMLLLAFSACEASAGLALLVATARTHGTDRLQ 91


                ....*
gi 188502499 92 SFSIM 96
Cdd:MTH00126 92 NLNLL 96
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-96 1.61e-05

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 39.85  E-value: 1.61e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 188502499  11 MILFILGLFCFVSnRKHLLSMLLSLEYIVL--ILFFFLFIYLNMLNYENYFSMMFLTF********LSILVSMIRTHGND 88
Cdd:pfam00420  7 GLLFLIGLYGLLL-RRNLLRVLLSLELMLNavNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTD 85


                 ....*...
gi 188502499  89 YFQSFSIM 96
Cdd:pfam00420 86 DVDSLNLL 93
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 14-95 8.06e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 37.90  E-value: 8.06e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 188502499 14 FILGLFCFVSNRKHLLSMLLSLEYIVLILFFFLFIYLNMLNYENYFSM--MFLTF********LSILVSMIRTHGNDYFQ 91
Cdd:MTH00125 12 FMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMpiILLTFSACEAGTGLALLVATTRTHGSDHLK 91


                ....
gi 188502499 92 SFSI 95
Cdd:MTH00125 92 NLNL 95
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 7-95 3.61e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 36.08  E-value: 3.61e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 188502499  7 WSFPMILFILGLFCFVSNRKHLLSMLLSLEYIVLILFFFLFIYLNMLNYENY--FSMMFLTF********LSILVSMIRT 84
Cdd:MTH00181  2 MFVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSMlmFGLILLTFSACEAVLGLSLLVATNRT 81

                        90
                ....*....|.
gi 188502499 85 HGNDYFQSFSI 95
Cdd:MTH00181 82 HGSDHLLKFNL 92
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 14-92 4.80e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 36.12  E-value: 4.80e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 188502499 14 FILGLFCFVSNRKHLLSMLLSLEYIVLILFFFLFIYLNMLNYENYFS--MMFLTF********LSILVSMIRTHGNDYFQ 91
Cdd:MTH00067 12 FLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSlpMFMLTFSACEASTGLALMVATTRTHGTDHLK 91


                .
gi 188502499 92 S 92
Cdd:MTH00067 92 N 92
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 12-94 8.98e-03

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 32.80  E-value: 8.98e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 188502499 12 ILFILGLFCFVSNRKHLLSMLLSLEYIVLILFFFLFIYLNMLNYEN-YFSMMFLTF********LSILVSMIRTHGNDYF 90
Cdd:MTH00013 10 ISPFISMFNLSLQRKHLLMSLLSLEAMILSLALFIPLSLMFANQVNgMLAIVLLTFGACEASLGLSLLVLMTRSYGNDML 89


                ....
gi 188502499 91 QSFS 94
Cdd:MTH00013 90 KSLT 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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