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Conserved domains on  [gi|187442|gb|AAA59568|]
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carboxypeptidase A [Homo sapiens]

Protein Classification

M14 family carboxypeptidase A/B( domain architecture ID 10491432)

M14 family carboxypeptidase A/B hydrolyzes single, C-terminal amino acids from polypeptide chains; carboxypeptidase A (CPA) enzymes favor hydrophobic residues while carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
M14_CPB cd03871
Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase B subgroup; Peptidase M14 ...
114-413 0e+00

Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase B subgroup; Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients. this subfamily also includes thrombin activatable fibrinolysis inhibitor (TAFIa), a carboxypeptidase that stabilizes fibrin clots by removing C-terminal arginines and lysines from partially degraded fibrin. Inhibition of TAFIa stimulates the degradation of fibrin clots and may help in prevention of thrombosis.


:

Pssm-ID: 349443 [Multi-domain]  Cd Length: 300  Bit Score: 602.91  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   114 HSYAKYNNWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIGEKNERRKAIFMDCGIHAREWVSPAFCQWFVYQA 193
Cdd:cd03871   1 HSYEKYNNWETIEAWTEQVASKNPDLVSRSQIGTTFEGRPIYLLKVGKPGSNKKAIFMDCGFHAREWISPAFCQWFVREA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   194 TKTYGRNKIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSKNQNSKCIGTDLNRNFNASWNSIPNTNDPCADNYR 273
Cdd:cd03871  81 VRTYGKEKIMTKLLDRLDFYILPVLNIDGYVYTWTKNRMWRKTRSPNAGSSCIGTDPNRNFNAGWCTVGASSNPCSETYC 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   274 GSAPESEKETKAVTNFIRSHLNEIKVYITFHSYSQMLLFPYGYTSKLPPNHEDLAKVAKIGTDVLSTRYETRYIYGPIES 353
Cdd:cd03871 161 GSAPESEKETKALANFIRNNLSSIKAYLTIHSYSQMLLYPYSYTYKLAPNHEELNSIAKGAVKELSSLYGTKYTYGPGAT 240
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   354 TIYPISGSSLDWAYDLGIKHTFAFELRDKGKFGFLLPESRIKPTCRETMLAVKFIAKYIL 413
Cdd:cd03871 241 TIYPAAGGSDDWAYDQGIKYSFTFELRDKGRYGFLLPESQIKPTCEETMLAVKYIANYVL 300
Propep_M14 pfam02244
Carboxypeptidase activation peptide; Carboxypeptidases are found in abundance in pancreatic ...
27-103 2.37e-20

Carboxypeptidase activation peptide; Carboxypeptidases are found in abundance in pancreatic secretions. The pro-segment moiety (activation peptide) accounts for up to a quarter of the total length of the peptidase, and is responsible for modulation of folding and activity of the pro-enzyme.


:

Pssm-ID: 460505  Cd Length: 73  Bit Score: 84.57  E-value: 2.37e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 187442      27 FRVKPQDEKQADIIKDLAKTNELDFWYPGAThhvaANMMVDFRVSEKESQAIQSALDQNKMHYEILIHDLQEEIEKQ 103
Cdd:pfam02244   1 YRVTPETEEQLQLLKELEESYDLDFWKPPSK----VGKPVDVMVPPSKLEAFEELLEKHGISYEVLIEDVQELIDEE 73
 
Name Accession Description Interval E-value
M14_CPB cd03871
Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase B subgroup; Peptidase M14 ...
114-413 0e+00

Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase B subgroup; Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients. this subfamily also includes thrombin activatable fibrinolysis inhibitor (TAFIa), a carboxypeptidase that stabilizes fibrin clots by removing C-terminal arginines and lysines from partially degraded fibrin. Inhibition of TAFIa stimulates the degradation of fibrin clots and may help in prevention of thrombosis.


Pssm-ID: 349443 [Multi-domain]  Cd Length: 300  Bit Score: 602.91  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   114 HSYAKYNNWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIGEKNERRKAIFMDCGIHAREWVSPAFCQWFVYQA 193
Cdd:cd03871   1 HSYEKYNNWETIEAWTEQVASKNPDLVSRSQIGTTFEGRPIYLLKVGKPGSNKKAIFMDCGFHAREWISPAFCQWFVREA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   194 TKTYGRNKIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSKNQNSKCIGTDLNRNFNASWNSIPNTNDPCADNYR 273
Cdd:cd03871  81 VRTYGKEKIMTKLLDRLDFYILPVLNIDGYVYTWTKNRMWRKTRSPNAGSSCIGTDPNRNFNAGWCTVGASSNPCSETYC 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   274 GSAPESEKETKAVTNFIRSHLNEIKVYITFHSYSQMLLFPYGYTSKLPPNHEDLAKVAKIGTDVLSTRYETRYIYGPIES 353
Cdd:cd03871 161 GSAPESEKETKALANFIRNNLSSIKAYLTIHSYSQMLLYPYSYTYKLAPNHEELNSIAKGAVKELSSLYGTKYTYGPGAT 240
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   354 TIYPISGSSLDWAYDLGIKHTFAFELRDKGKFGFLLPESRIKPTCRETMLAVKFIAKYIL 413
Cdd:cd03871 241 TIYPAAGGSDDWAYDQGIKYSFTFELRDKGRYGFLLPESQIKPTCEETMLAVKYIANYVL 300
Peptidase_M14 pfam00246
Zinc carboxypeptidase;
125-404 2.23e-127

Zinc carboxypeptidase;


Pssm-ID: 459730 [Multi-domain]  Cd Length: 287  Bit Score: 368.93  E-value: 2.23e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442     125 IVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKI----GEKNERRKAIFMDCGIHAREWVSPAFCQWFVYQATKTYGRN 200
Cdd:pfam00246   1 IEAWLDALAARYPDLVRLVSIGKSVEGRPLKVLKIssgpGEHNPGKPAVFIDGGIHAREWIGPATALYLIHQLLTNYGRD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442     201 KIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSKNQNSKCIGTDLNRNFNASWNSIPNTNDPCADNYRGSAPESE 280
Cdd:pfam00246  81 PEITELLDDTDIYILPVVNPDGYEYTHTTDRLWRKNRSNANGSSCIGVDLNRNFPDHWNEVGASSNPCSETYRGPAPFSE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442     281 KETKAVTNFIRSHlNEIKVYITFHSYSQMLLFPYGYTSK-LPPNHEDLAKVAKIGTDVL-STRYETRYIYGPIES-TIYP 357
Cdd:pfam00246 161 PETRAVADFIRSK-KPFVLYISLHSYSQVLLYPYGYTRDePPPDDEELKSLARAAAKALqKMVRGTSYTYGITNGaTIYP 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 187442     358 ISGSSLDWAY-DLGIKHTFAFELRDKGKFGFLLPESRIKPTCRETMLA 404
Cdd:pfam00246 240 ASGGSDDWAYgRLGIKYSYTIELRDTGRYGFLLPASQIIPTAEETWEA 287
Zn_pept smart00631
Zn_pept domain;
119-398 4.09e-126

Zn_pept domain;


Pssm-ID: 214748 [Multi-domain]  Cd Length: 277  Bit Score: 365.51  E-value: 4.09e-126
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442      119 YNNWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIGEKNERRK-AIFMDCGIHAREWVSPAFCQWFVYQATKTY 197
Cdd:smart00631   1 YHSYEEIEAWLKELAARYPDLVRLVSIGKSVEGRPIWVLKISNGGSHDKpAIFIDAGIHAREWIGPATALYLINQLLENY 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442      198 GRNKIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSKNQNskCIGTDLNRNFNASWNSipnTNDPCADNYRGSAP 277
Cdd:smart00631  81 GRDPRVTNLLDKTDIYIVPVLNPDGYEYTHTGDRLWRKNRSPNSN--CRGVDLNRNFPFHWGE---TGNPCSETYAGPSP 155
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442      278 ESEKETKAVTNFIRSHLNeIKVYITFHSYSQMLLFPYGYTSK-LPPNHEDLAKVAKIGTDVLSTRYETRYIYGPIESTIY 356
Cdd:smart00631 156 FSEPETKAVRDFIRSNRR-FKLYIDLHSYSQLILYPYGYTKNdLPPNVDDLDAVAKALAKALASVHGTRYTYGISNGAIY 234
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|...
gi 187442      357 PISGSSLDWAYD-LGIKHTFAFELRDKGKFGFLLPESRIKPTC 398
Cdd:smart00631 235 PASGGSDDWAYGvLGIPFSFTLELRDDGRYGFLLPPSQIIPTG 277
MpaA COG2866
Murein tripeptide amidase MpaA [Cell wall/membrane/envelope biogenesis];
115-377 1.84e-31

Murein tripeptide amidase MpaA [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442113 [Multi-domain]  Cd Length: 337  Bit Score: 122.49  E-value: 1.84e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   115 SYAKYNNWEKIVAWTEKMMDKyPEMVSRIKIGSTVEDNPLYVLKIGEKNERRKAIFMDCGIHAREWVSPAFCQWFVYQAT 194
Cdd:COG2866  15 SYDRYYTYEELLALLAKLAAA-SPLVELESIGKSVEGRPIYLLKIGDPAEGKPKVLLNAQQHGNEWTGTEALLGLLEDLL 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   195 KTYGRNkiMTKLLDRMNFYILPVFNVDGYiwswtkNRMWRKNRsknqnskcIGTDLNRNFNASWnsipntndpcadnyrg 274
Cdd:COG2866  94 DNYDPL--IRALLDNVTLYIVPMLNPDGA------ERNTRTNA--------NGVDLNRDWPAPW---------------- 141
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   275 sapESEKETKAVTNFIRSHlnEIKVYITFHSYSQMLLFPYGYTSK-----LPPNHEDLAKVAkigtDVLSTRYETRYIYG 349
Cdd:COG2866 142 ---LSEPETRALRDLLDEH--DPDFVLDLHGQGELFYWFVGTTEPtgsflAPSYDEEREAFA----EELNFEGIILAGSA 212
                       250       260
                ....*....|....*....|....*...
gi 187442   350 PIESTIYPISGSSLDWAYDLGIKHTFAF 377
Cdd:COG2866 213 FLGAGAAGTLLISAPRQTFLFAAALDIG 240
Propep_M14 pfam02244
Carboxypeptidase activation peptide; Carboxypeptidases are found in abundance in pancreatic ...
27-103 2.37e-20

Carboxypeptidase activation peptide; Carboxypeptidases are found in abundance in pancreatic secretions. The pro-segment moiety (activation peptide) accounts for up to a quarter of the total length of the peptidase, and is responsible for modulation of folding and activity of the pro-enzyme.


Pssm-ID: 460505  Cd Length: 73  Bit Score: 84.57  E-value: 2.37e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 187442      27 FRVKPQDEKQADIIKDLAKTNELDFWYPGAThhvaANMMVDFRVSEKESQAIQSALDQNKMHYEILIHDLQEEIEKQ 103
Cdd:pfam02244   1 YRVTPETEEQLQLLKELEESYDLDFWKPPSK----VGKPVDVMVPPSKLEAFEELLEKHGISYEVLIEDVQELIDEE 73
 
Name Accession Description Interval E-value
M14_CPB cd03871
Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase B subgroup; Peptidase M14 ...
114-413 0e+00

Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase B subgroup; Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients. this subfamily also includes thrombin activatable fibrinolysis inhibitor (TAFIa), a carboxypeptidase that stabilizes fibrin clots by removing C-terminal arginines and lysines from partially degraded fibrin. Inhibition of TAFIa stimulates the degradation of fibrin clots and may help in prevention of thrombosis.


Pssm-ID: 349443 [Multi-domain]  Cd Length: 300  Bit Score: 602.91  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   114 HSYAKYNNWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIGEKNERRKAIFMDCGIHAREWVSPAFCQWFVYQA 193
Cdd:cd03871   1 HSYEKYNNWETIEAWTEQVASKNPDLVSRSQIGTTFEGRPIYLLKVGKPGSNKKAIFMDCGFHAREWISPAFCQWFVREA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   194 TKTYGRNKIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSKNQNSKCIGTDLNRNFNASWNSIPNTNDPCADNYR 273
Cdd:cd03871  81 VRTYGKEKIMTKLLDRLDFYILPVLNIDGYVYTWTKNRMWRKTRSPNAGSSCIGTDPNRNFNAGWCTVGASSNPCSETYC 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   274 GSAPESEKETKAVTNFIRSHLNEIKVYITFHSYSQMLLFPYGYTSKLPPNHEDLAKVAKIGTDVLSTRYETRYIYGPIES 353
Cdd:cd03871 161 GSAPESEKETKALANFIRNNLSSIKAYLTIHSYSQMLLYPYSYTYKLAPNHEELNSIAKGAVKELSSLYGTKYTYGPGAT 240
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   354 TIYPISGSSLDWAYDLGIKHTFAFELRDKGKFGFLLPESRIKPTCRETMLAVKFIAKYIL 413
Cdd:cd03871 241 TIYPAAGGSDDWAYDQGIKYSFTFELRDKGRYGFLLPESQIKPTCEETMLAVKYIANYVL 300
M14_CP_A-B_like cd03860
Peptidase M14 carboxypeptidase subfamily A/B-like; The Peptidase M14 Carboxypeptidase (CP) A/B ...
119-412 8.10e-140

Peptidase M14 carboxypeptidase subfamily A/B-like; The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the pancreas. The A forms have slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 preferring the bulkier aromatic side chains. CPA3 is found in secretory granules of mast cells and functions in inflammatory processes. CPA4 is detected in hormone-regulated tissues, and is thought to play a role in prostate cancer. CPA5 is present in discrete regions of pituitary and other tissues, and cleaves aliphatic C-terminal residues. CPA6 is highly expressed in embryonic brain and optic muscle, suggesting that it may play a specific role in cell migration and axonal guidance. CPU (also called CPB2) is produced and secreted by the liver as the inactive precursor, PCPU, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). Little is known about CPO but it has been suggested to have specificity for acidic residues.


Pssm-ID: 349433 [Multi-domain]  Cd Length: 300  Bit Score: 401.13  E-value: 8.10e-140
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   119 YNNWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIG--EKNERRKAIFMDCGIHAREWVSPAFCQWFVYQATKT 196
Cdd:cd03860   1 YHPLDDIVQWLDDLAAAFPDNVEIFTIGKSYEGRDITGIHIWgsGGKGGKPAIVIHGGQHAREWISTSTVEYLAHQLLSG 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   197 YGRNKIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSKNQNSKCIGTDLNRNFNASWNSIPNTNDPCADNYRGSA 276
Cdd:cd03860  81 YGSDATITALLDKFDFYIIPVVNPDGYVYTWTTDRLWRKNRQPTGGSSCVGIDLNRNWGYKWGGPGASTNPCSETYRGPS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   277 PESEKETKAVTNFIRSHLNE--IKVYITFHSYSQMLLFPYGYT-SKLPPNHEDLAKVAKIGTDVLSTRYETRYIYGPIES 353
Cdd:cd03860 161 AFSAPETKALADFINALAAGqgIKGFIDLHSYSQLILYPYGYScDAVPPDLENLMELALGAAKAIRAVHGTTYTVGPACS 240
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   354 TIYPISGSSLDWAYD-LGIKHTFAFELRDKGKFGFLLPESRIKPTCRETMLAVKFIAKYI 412
Cdd:cd03860 241 TLYPASGSSLDWAYDvAKIKYSYTIELRDTGTYGFLLPPEQILPTGEETWAGVKYLADFI 300
M14_CPB2 cd06246
Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase B2 subgroup; Peptidase M14 ...
116-413 4.56e-134

Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase B2 subgroup; Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPB2 enzyme displays B-like activity; it only cleaves the basic residues lysine or arginine. It is produced and secreted by the liver as the inactive precursor, procarboxypeptidase U or PCPB2, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). It circulates in plasma as a zymogen bound to plasminogen, and the active enzyme, TAFIa, inhibits fibrinolysis. It is highly regulated, increased TAFI concentrations are thought to increase the risk of thrombosis and coronary artery disease by reducing fibrinolytic activity while low TAFI levels have been correlated with chronic liver disease.


Pssm-ID: 349465 [Multi-domain]  Cd Length: 300  Bit Score: 386.47  E-value: 4.56e-134
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   116 YAKYNNWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIGEKNER-RKAIFMDCGIHAREWVSPAFCQWFVYQAT 194
Cdd:cd06246   2 YEQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQTaKNAIWIDCGIHAREWISPAFCLWFIGHAS 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   195 KTYGRNKIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSKNQNSKCIGTDLNRNFNASWNSIPNTNDPCADNYRG 274
Cdd:cd06246  82 YFYGIIGQHTNLLNLVDFYVMPVVNVDGYDYSWKKNRMWRKNRSKHANNRCIGTDLNRNFDAGWCGKGASSDSCSETYCG 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   275 SAPESEKETKAVTNFIRSHLNEIKVYITFHSYSQMLLFPYGYTSKLPPNHEDLAKVAKIGTDVLSTRYETRYIYGPIEST 354
Cdd:cd06246 162 PYPESEPEVKAVASFLRRHKDTIKAYISMHSYSQMVLFPYSYTRNKSKDHDELSLLAKEAVTAIRKTSRNRYTYGPGAET 241
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 187442   355 IYPISGSSLDWAYDLGIKHTFAFELRDKGKFGFLLPESRIKPTCRETMLAVKFIAKYIL 413
Cdd:cd06246 242 IYLAPGGSDDWAYDLGIKYSFTFELRDRGTYGFLLPPSYIKPTCNEALLAVKKIALHVI 300
Peptidase_M14 pfam00246
Zinc carboxypeptidase;
125-404 2.23e-127

Zinc carboxypeptidase;


Pssm-ID: 459730 [Multi-domain]  Cd Length: 287  Bit Score: 368.93  E-value: 2.23e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442     125 IVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKI----GEKNERRKAIFMDCGIHAREWVSPAFCQWFVYQATKTYGRN 200
Cdd:pfam00246   1 IEAWLDALAARYPDLVRLVSIGKSVEGRPLKVLKIssgpGEHNPGKPAVFIDGGIHAREWIGPATALYLIHQLLTNYGRD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442     201 KIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSKNQNSKCIGTDLNRNFNASWNSIPNTNDPCADNYRGSAPESE 280
Cdd:pfam00246  81 PEITELLDDTDIYILPVVNPDGYEYTHTTDRLWRKNRSNANGSSCIGVDLNRNFPDHWNEVGASSNPCSETYRGPAPFSE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442     281 KETKAVTNFIRSHlNEIKVYITFHSYSQMLLFPYGYTSK-LPPNHEDLAKVAKIGTDVL-STRYETRYIYGPIES-TIYP 357
Cdd:pfam00246 161 PETRAVADFIRSK-KPFVLYISLHSYSQVLLYPYGYTRDePPPDDEELKSLARAAAKALqKMVRGTSYTYGITNGaTIYP 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 187442     358 ISGSSLDWAY-DLGIKHTFAFELRDKGKFGFLLPESRIKPTCRETMLA 404
Cdd:pfam00246 240 ASGGSDDWAYgRLGIKYSYTIELRDTGRYGFLLPASQIIPTAEETWEA 287
Zn_pept smart00631
Zn_pept domain;
119-398 4.09e-126

Zn_pept domain;


Pssm-ID: 214748 [Multi-domain]  Cd Length: 277  Bit Score: 365.51  E-value: 4.09e-126
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442      119 YNNWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIGEKNERRK-AIFMDCGIHAREWVSPAFCQWFVYQATKTY 197
Cdd:smart00631   1 YHSYEEIEAWLKELAARYPDLVRLVSIGKSVEGRPIWVLKISNGGSHDKpAIFIDAGIHAREWIGPATALYLINQLLENY 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442      198 GRNKIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSKNQNskCIGTDLNRNFNASWNSipnTNDPCADNYRGSAP 277
Cdd:smart00631  81 GRDPRVTNLLDKTDIYIVPVLNPDGYEYTHTGDRLWRKNRSPNSN--CRGVDLNRNFPFHWGE---TGNPCSETYAGPSP 155
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442      278 ESEKETKAVTNFIRSHLNeIKVYITFHSYSQMLLFPYGYTSK-LPPNHEDLAKVAKIGTDVLSTRYETRYIYGPIESTIY 356
Cdd:smart00631 156 FSEPETKAVRDFIRSNRR-FKLYIDLHSYSQLILYPYGYTKNdLPPNVDDLDAVAKALAKALASVHGTRYTYGISNGAIY 234
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|...
gi 187442      357 PISGSSLDWAYD-LGIKHTFAFELRDKGKFGFLLPESRIKPTC 398
Cdd:smart00631 235 PASGGSDDWAYGvLGIPFSFTLELRDDGRYGFLLPPSQIIPTG 277
M14_CPO cd06247
Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase O subgroup; Peptidase M14 ...
116-412 2.14e-124

Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase O subgroup; Peptidase M14 carboxypeptidase (CP) O (CPO, also known as metallocarboxypeptidase C; EC 3.4.17.) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPO has not been well characterized as yet, and little is known about it. Based on modeling studies, CPO has been suggested to have specificity for acidic residues rather than aliphatic/aromatic residues as in A-like enzymes or basic residues as in B-like enzymes. It remains to be demonstrated that CPO is functional as an MCP.


Pssm-ID: 349466 [Multi-domain]  Cd Length: 298  Bit Score: 361.86  E-value: 2.14e-124
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   116 YAKYNNWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIGEKNER-RKAIFMDCGIHAREWVSPAFCQWFVYQAT 194
Cdd:cd06247   1 YTKYHPMDEIYQWMDQMQEKNSEVVSQHYLGQTYEKRPMYYLKIGWPSDKpKKIIWMDCGIHAREWIAPAFCQWFVKEIL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   195 KTYGRNKIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSKNQNSKCIGTDLNRNFNASWNSIPNTNDPCADNYRG 274
Cdd:cd06247  81 QNYKTDSRLNKLLKNLDFYVLPVLNIDGYIYSWTTDRLWRKSRSPHNNGTCYGTDLNRNFNSQWCSIGASRNCCSIIFCG 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   275 SAPESEKETKAVTNFIRSHLNEIKVYITFHSYSQMLLFPYGYTSKLPPNHEDLAKVAKIGTDVLSTRYETRYIYGPIEST 354
Cdd:cd06247 161 TGPESEPETKAVADLIEKKKSDILCYLTIHSYGQLILLPYGYTKEPSPNHEEMMEVGEKAAAALKEKHGTSYRVGSSADI 240
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 187442   355 IYPISGSSLDWAYDLGIKHTFAFELRDKGKFGFLLPESRIKPTCRETMLAVKFIAKYI 412
Cdd:cd06247 241 LYSNSGSSRDWARDIGIPFSYTFELRDTGTYGFVLPEDQIQPTCEETMEAVMSIIEYV 298
M14_CPA cd03870
Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase A subgroup; Peptidase M14 ...
115-415 2.27e-121

Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase A subgroup; Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 preferring the bulkier aromatic side chains. CPA4, detected in hormone-regulated tissues, is thought to play a role in prostate cancer.


Pssm-ID: 349442 [Multi-domain]  Cd Length: 301  Bit Score: 354.44  E-value: 2.27e-121
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   115 SYAKYNNWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIGEKNERRKAIFMDCGIHAREWVSPAFCQWFVYQAT 194
Cdd:cd03870   2 NYAAYHTLEEIYFWMDNLVAEHPNLVSKLQIGSSFENRPMYVLKFSTGGEERPAIWIDAGIHSREWVTQASAIWTAEKIV 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   195 KTYGRNKIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSKNQNSKCIGTDLNRNFNASWNSIPNTNDPCADNYRG 274
Cdd:cd03870  82 SDYGKDPSITSILDTMDIFLEIVTNPDGYVFTHSSNRLWRKTRSVNPGSLCIGVDPNRNWDAGFGGPGASSNPCSETYHG 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   275 SAPESEKETKAVTNFIRSHLNeIKVYITFHSYSQMLLFPYGYTSKLPPNHEDLAKVAKIGTDVLSTRYETRYIYGPIEST 354
Cdd:cd03870 162 PHANSEVEVKSIVDFIQSHGN-FKAFISIHSYSQLLMYPYGYTVEKAPDQEELDEVAKKAVKALASLHGTEYKVGSISTT 240
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 187442   355 IYPISGSSLDWAYDLGIKHTFAFELRDKGKFGFLLPESRIKPTCRETMLAVKFIAKYILKH 415
Cdd:cd03870 241 IYQASGSSIDWAYDNGIKYAFTFELRDTGRYGFLLPANQIIPTAEETWLALKTIMEHVRDH 301
M14_CPA6 cd03872
Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase A6 subgroup; ...
119-414 7.53e-117

Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase A6 subgroup; Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3.4.17.1), belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA6 prefers large hydrophobic C-terminal amino acids as well as histidine, while peptides with a penultimate glycine or proline are very poorly cleaved. Several neuropeptides are processed by CPA6, including Met- and Leu-enkephalin, angiotensin I, and neurotensin. CPA6 converts enkephalin and neurotensin into forms known to be inactive toward their receptors, but converts inactive angiotensin I into the biologically active angiotensin II. Thus, CPA6 plays a possible role in the regulation of neuropeptides in the extracellular environment within the olfactory bulb where it is highly expressed. It is also broadly expressed in embryonic tissue, being found in neuronal tissues, bone, skin as well as the lateral rectus eye muscle. A disruption in the CPA6 gene is linked to Duane syndrome, a defect in the abducens nerve/lateral rectus muscle connection.


Pssm-ID: 349444 [Multi-domain]  Cd Length: 300  Bit Score: 342.73  E-value: 7.53e-117
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   119 YNNWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIGEKNER-RKAIFMDCGIHAREWVSPAFCQWFVYQATKTY 197
Cdd:cd03872   2 YHSLEEIESWMFYMNKTHSDLVHMFSIGKSYEGRSLYVLKLGKRSRSyKKAVWIDCGIHAREWIGPAFCQWFVKEAINSY 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   198 GRNKIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSKNQNSKCIGTDLNRNFNASWNSIPNTNDPCADNYRGSAP 277
Cdd:cd03872  82 QTDPAMKKMLNQLYFYVMPVFNVDGYHYSWTNDRFWRKTRSKNSRFQCRGVDANRNWKVKWCDEGASLHPCDDTYCGPFP 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   278 ESEKETKAVTNFIRSHLNEIKVYITFHSYSQMLLFPYGYTSKLPPNHEDLAKVAKIGTDVLSTRYETRYIYGPIESTIYP 357
Cdd:cd03872 162 ESEPEVKAVAQFLRKHRKHVRAYLSFHAYAQMLLYPYSYKYATIPNFGCVESAAHNAVNALQSAYGVRYRYGPASSTLYV 241
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 187442   358 ISGSSLDWAYDLGIKHTFAFELRDKGKFGFLLPESRIKPTCRETMLAVKFIAKYILK 414
Cdd:cd03872 242 SSGSSMDWAYKNGIPYAFAFELRDTGYFGFLLPEGLIKPTCTETMLAVKNITMHLLK 298
M14_CPT cd03859
Peptidase M14 Carboxypeptidase T subfamily; Peptidase M14-like domain of carboxypeptidase (CP) ...
119-405 4.40e-76

Peptidase M14 Carboxypeptidase T subfamily; Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor.


Pssm-ID: 349432 [Multi-domain]  Cd Length: 292  Bit Score: 238.31  E-value: 4.40e-76
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   119 YNNWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIG----EKNERRKAIFMDCgIHAREWVSPAFCQWFVYQAT 194
Cdd:cd03859   4 YHTYAELVAELDQLAAEYPEITKLISIGKSVEGRPIWAVKISdnpdEDEDEPEVLFMGL-HHAREWISLEVALYFADYLL 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   195 KTYGRNKIMTKLLDRMNFYILPVFNVDGYIWS--WTKNRMWRKNRskNQNSKC----IGTDLNRNFNASW--NSIPNTND 266
Cdd:cd03859  83 ENYGTDPRITNLVDNREIWIIPVVNPDGYEYNreTGGGRLWRKNR--RPNNGNnpgsDGVDLNRNYGYHWggDNGGSSPD 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   267 PCADNYRGSAPESEKETKAVTNFIRSHlnEIKVYITFHSYSQMLLFPYGYTSKLPPNHEDLakVAKIGTDVlsTRYETRY 346
Cdd:cd03859 161 PSSETYRGPAPFSEPETQAIRDLVESH--DFKVAISYHSYGELVLYPWGYTSDAPTPDEDV--FEELAEEM--ASYNGGG 234
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 187442   347 IYGPIESTIYPISGSSLDWAYdlGIKHTFAF--ELRDKGkFGFLLPESRIKPTCRETMLAV 405
Cdd:cd03859 235 YTPQQSSDLYPTNGDTDDWMY--GEKGIIAFtpELGPEF-YPFYPPPSQIDPLAEENLPAA 292
M14_CP_insect cd06248
Peptidase M14 carboxypeptidase subfamily A/B-like; This family includes peptidase M14 ...
119-409 2.81e-68

Peptidase M14 carboxypeptidase subfamily A/B-like; This family includes peptidase M14 carboxypeptidases found specifically in insects, including B-type carboxypeptidase of H. zea (CPBHz, insect gut carboxypeptidase-3) that is insensitive to potato carboxypeptidase inhibitor (PCI) in corn earworm, and midgut procarboxypeptidase A (PCPAHa, insect gut carboxypeptidase-1) from Helicoverpa armigera larva, a devastating pest of crops. PCPAHa preferentially cleaves aliphatic and aromatic residues. The peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the pancreas. The A forms have slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 preferring the bulkier aromatic side chains. CPA3 is found in secretory granules of mast cells and functions in inflammatory processes. CPA4 is detected in hormone-regulated tissues, and is thought to play a role in prostate cancer. CPA5 is present in discrete regions of pituitary and other tissues, and cleaves aliphatic C-terminal residues. CPA6 is highly expressed in embryonic brain and optic muscle, suggesting that it may play a specific role in cell migration and axonal guidance. CPU (also called CPB2) is produced and secreted by the liver as the inactive precursor, PCPU, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). Little is known about CPO but it has been suggested to have specificity for acidic residues.


Pssm-ID: 349467 [Multi-domain]  Cd Length: 297  Bit Score: 218.48  E-value: 2.81e-68
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   119 YNNWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIGEKN---ERRKAIFMDCGIHAREWVSPAFCQWFVYQATK 195
Cdd:cd06248   1 YHSLDEIDEYLDGLAEESPDVVTVVEGGYTFEGRPIKYVRIRSTNsedTSKPTIMIEGGINPREWISPPAALYAIHKLVE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   196 tygRNKIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSKNQNSK---CIGTDLNRNFNASWNSIPNTNDPCADNY 272
Cdd:cd06248  81 ---DVETQSDLLNNFDWIILPVANPDGYVFTHTNDREWTKNRSTNSNPLgqiCFGVNINRNFDYQWNPVLSSESPCSELY 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   273 RGSAPESEKETKAVTNFIRSHLNEIKVYITFHSYSQMLLFPYGYTSKLPPNHEDLAKVAKIGTDVLSTRYETRYIYGPIE 352
Cdd:cd06248 158 AGPSAFSEAESRAIRDILHEHGNRIHLYISFHSGGSFILYPWGYDGSTSSNARQLHLAGVAAAAAISSNNGRPYVVGQSS 237
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 187442   353 STIYPISGSSLDWAYDL-GIKHTfaFELRDK-GKFGFLLPESRIKPTCRETMLAVKFIA 409
Cdd:cd06248 238 VLLYRAAGTSSDYAMGIaGIDYT--YELPGYsSGDPFYVPPAYIEQVVREAWEGIVVGA 294
Peptidase_M14_like cd00596
M14 family of metallocarboxypeptidases and related proteins; The M14 family of ...
169-394 2.23e-43

M14 family of metallocarboxypeptidases and related proteins; The M14 family of metallocarboxypeptidases (MCPs), also known as funnelins, are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavage. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.


Pssm-ID: 349427 [Multi-domain]  Cd Length: 216  Bit Score: 151.07  E-value: 2.23e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   169 IFMDCGIHAREWVSPAFCQWFVYQATKTYGRNKImTKLLDRMNFYILPVFNVDGYIWSWTknRMWRKNRSknqnskciGT 248
Cdd:cd00596   1 ILITGGIHGNEVIGVELALALIEYLLENYGNDPL-KRLLDNVELWIVPLVNPDGFARVID--SGGRKNAN--------GV 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   249 DLNRNFNASWNSiPNTNDPCADNYRGSAPESEKETKAVTNFIRSHlnEIKVYITFHSYSQMLLFPYGYTSKLPPNHEDLA 328
Cdd:cd00596  70 DLNRNFPYNWGK-DGTSGPSSPTYRGPAPFSEPETQALRDLAKSH--RFDLAVSYHSSSEAILYPYGYTNEPPPDFSEFQ 146
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 187442   329 KVAKIgtdvLSTRYETRYIYGPIESTIYPISGSSLDWAYDLGIKHTFAFELRDKGKFGFLLPESRI 394
Cdd:cd00596 147 ELAAG----LARALGAGEYGYGYSYTWYSTTGTADDWLYGELGILAFTVELGTADYPLPGTLLDRR 208
M14_CPT_like cd06226
Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase T (CPT) ...
154-379 3.01e-38

Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase T (CPT)-like proteins; Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase T (CPT)-like proteins. This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group.


Pssm-ID: 349445 [Multi-domain]  Cd Length: 267  Bit Score: 139.13  E-value: 3.01e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   154 LYVLKIGEKNER----RKAIFMDCGIHAREWVSPAFCQWFVYQATKTYGRNKIMTKLLDRMNFYILPVFNVDGYIWSWTk 229
Cdd:cd06226   2 IRALKLTNKQATppgeKPKFFMMAAIHAREYTTAELVARFAEDLVAGYGTDADATWLLDYTELHLVPQVNPDGRKIAET- 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   230 NRMWRKNrsKNQNSKCI-----GTDLNRNFNASWNSIPNTNDPCADNYRGSAPESEKETKAVTNFIRSHLNEIK------ 298
Cdd:cd06226  81 GLLWRKN--TNTTPCPAssptyGVDLNRNSSFKWGGAGAGGSACSETYRGPSAASEPETQAIENYVKQLFPDQRgpgltd 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   299 --------VYITFHSYSQMLLFPYGYTSKLPPNHEDLAKVAKigtdvlSTRYETRYIYGPIEStIYPISGSSLDWAY-DL 369
Cdd:cd06226 159 papddtsgIYIDIHSYGNLVLYPWGWTGTPAPNAAGLRTLGR------KFAYFNGYTPQQAVA-LYPTDGTTDDFAYgTL 231
                       250
                ....*....|
gi 187442   370 GIKhTFAFEL 379
Cdd:cd06226 232 GVA-AYTFEL 240
M14-like cd06228
Peptidase M14-like domain; uncharacterized subfamily; A functionally uncharacterized subgroup ...
167-389 5.70e-36

Peptidase M14-like domain; uncharacterized subfamily; A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.


Pssm-ID: 349447  Cd Length: 294  Bit Score: 133.66  E-value: 5.70e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   167 KAIFMDCGIHAREWVSPAFCQWFV------YQATK--TYGRNKIMTK----LLDRMNFYILPVFNVDGYIWSWTKNRMWR 234
Cdd:cd06228   1 PGVYFIGGVHAREWGSPDILIYFAadlleaYTNNTglTYGGKTFTAAqvksILENVDLVVFPLVNPDGRWYSQTSESMWR 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   235 KNR---SKNQNSKCIGTDLNRNFNASWN--------SIPNTNDPCADNYRGSAPESEKETKAVTNFIRSHLNeIKVYITF 303
Cdd:cd06228  81 KNRnpaSAGDGGSCIGVDINRNFDFLWDfpryfdpgRVPASTSPCSETYHGPSAFSEPETRNVVWLFDAYPN-IRWFVDV 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   304 HSYSQMLLFPYG-----------------------------YTSKLPPnhEDLAKVAKIGTD-VLSTRYETRYIYGPIES 353
Cdd:cd06228 160 HSASELILYSWGddenqstdpamnflnpaydgkrgiagdtrYREFIPS--DDRTIAVNLANRmALAIAAVRGRVYTVQQA 237
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 187442   354 -TIYPISGSSLDWAYDlgiKHTFAfelRDKGK-FGFLL 389
Cdd:cd06228 238 fGLYPTSGASDDYAYS---RHFVN---PAKRKvYGFTI 269
MpaA COG2866
Murein tripeptide amidase MpaA [Cell wall/membrane/envelope biogenesis];
115-377 1.84e-31

Murein tripeptide amidase MpaA [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442113 [Multi-domain]  Cd Length: 337  Bit Score: 122.49  E-value: 1.84e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   115 SYAKYNNWEKIVAWTEKMMDKyPEMVSRIKIGSTVEDNPLYVLKIGEKNERRKAIFMDCGIHAREWVSPAFCQWFVYQAT 194
Cdd:COG2866  15 SYDRYYTYEELLALLAKLAAA-SPLVELESIGKSVEGRPIYLLKIGDPAEGKPKVLLNAQQHGNEWTGTEALLGLLEDLL 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   195 KTYGRNkiMTKLLDRMNFYILPVFNVDGYiwswtkNRMWRKNRsknqnskcIGTDLNRNFNASWnsipntndpcadnyrg 274
Cdd:COG2866  94 DNYDPL--IRALLDNVTLYIVPMLNPDGA------ERNTRTNA--------NGVDLNRDWPAPW---------------- 141
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   275 sapESEKETKAVTNFIRSHlnEIKVYITFHSYSQMLLFPYGYTSK-----LPPNHEDLAKVAkigtDVLSTRYETRYIYG 349
Cdd:COG2866 142 ---LSEPETRALRDLLDEH--DPDFVLDLHGQGELFYWFVGTTEPtgsflAPSYDEEREAFA----EELNFEGIILAGSA 212
                       250       260
                ....*....|....*....|....*...
gi 187442   350 PIESTIYPISGSSLDWAYDLGIKHTFAF 377
Cdd:COG2866 213 FLGAGAAGTLLISAPRQTFLFAAALDIG 240
M14-like cd06905
Peptidase M14-like domain; uncharacterized subfamily; A functionally uncharacterized subgroup ...
115-384 5.59e-30

Peptidase M14-like domain; uncharacterized subfamily; A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.


Pssm-ID: 349476 [Multi-domain]  Cd Length: 359  Bit Score: 118.87  E-value: 5.59e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   115 SYAKYNNWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIGEKN----ERRKAIFMDCGIHAREWVSPAFCQWFV 190
Cdd:cd06905   2 AFDRYYTYAELTARLKALAEAYPNLVRLESIGKSYEGRDIWLLTITNGEtgpaDEKPALWVDGNIHGNEVTGSEVALYLA 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   191 YQATKTYGRNKIMTKLLDRMNFYILPVFNVDGYIWSWTKN--------------------------------RMWRK--- 235
Cdd:cd06905  82 EYLLTNYGKDPEITRLLDTRTFYILPRLNPDGAEAYKLKTersgrssprdddrdgdgdedgpedlngdglitQMRVKdpt 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   236 --------------NRSKNQ------------NSK--------CIGTDLNRNFNASWNsiPNTNDPCADNYrgsaPESEK 281
Cdd:cd06905 162 gtwkvdpddprlmvDREKGEkgfyrlypegidNDGdgrynedgPGGVDLNRNFPYNWQ--PFYVQPGAGPY----PLSEP 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   282 ETKAVTNFIRSHLNeIKVYITFHSYSQMLLFPYGYTSKLPPNHEDLAKVAKIGT-DVLSTRYETRYIYGPIeSTIY--PI 358
Cdd:cd06905 236 ETRAVADFLLAHPN-IAAVLTFHTSGGMILRPPGTGPDSDMPPADRRVYDAIGKkGVELTGYPVSSVYKDF-YTVPggPL 313
                       330       340       350
                ....*....|....*....|....*....|.
gi 187442   359 SGSSLDWAYD-LGIkHTFAFEL----RDKGK 384
Cdd:cd06905 314 DGDFFDWAYFhLGI-PSFSTELwdlpEFAGK 343
M14-CPA-like cd06227
Peptidase M14 carboxypeptidase A-like domain; uncharacterized subfamily; A functionally ...
169-379 1.00e-27

Peptidase M14 carboxypeptidase A-like domain; uncharacterized subfamily; A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.


Pssm-ID: 349446 [Multi-domain]  Cd Length: 224  Bit Score: 109.28  E-value: 1.00e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   169 IFMDCGIHAREWVSPAFCQWFV------YQATKTYGRNKIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSknqn 242
Cdd:cd06227   4 VLLVFGEHARELISVESALRLLrqlcggLQEPAASALRELAREILDNVELKIIPNANPDGRRLVESGDYCWRGNEN---- 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   243 skciGTDLNRNFNASWNsiPNTNDPCADNYRGSAPESEKETKAVTNFIRSHlnEIKVYITFHSYSQMLLFPYGYT-SKLP 321
Cdd:cd06227  80 ----GVDLNRNWGVDWG--KGEKGAPSEEYPGPKPFSEPETRALRDLALSF--KPHAFVSVHSGMLAIYTPYAYSaSVPR 151
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   322 PNHEDLAKVAkigTDVLSTRYETRYIYGPIESTI-YPISGSSLDWAYD-LGIKHTFAFEL 379
Cdd:cd06227 152 PNRAADMDDL---LDVVAKASCGDCTVGSAGKLVgYLADGTAMDYMYGkLKVPYSFTFEI 208
Propep_M14 pfam02244
Carboxypeptidase activation peptide; Carboxypeptidases are found in abundance in pancreatic ...
27-103 2.37e-20

Carboxypeptidase activation peptide; Carboxypeptidases are found in abundance in pancreatic secretions. The pro-segment moiety (activation peptide) accounts for up to a quarter of the total length of the peptidase, and is responsible for modulation of folding and activity of the pro-enzyme.


Pssm-ID: 460505  Cd Length: 73  Bit Score: 84.57  E-value: 2.37e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 187442      27 FRVKPQDEKQADIIKDLAKTNELDFWYPGAThhvaANMMVDFRVSEKESQAIQSALDQNKMHYEILIHDLQEEIEKQ 103
Cdd:pfam02244   1 YRVTPETEEQLQLLKELEESYDLDFWKPPSK----VGKPVDVMVPPSKLEAFEELLEKHGISYEVLIEDVQELIDEE 73
M14_Endopeptidase_I cd06229
Peptidase M14 carboxypeptidase family-like domain of Endopeptidase I; Peptidase M14-like ...
169-333 1.63e-18

Peptidase M14 carboxypeptidase family-like domain of Endopeptidase I; Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3.4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs), and is classified as belonging to subfamily C. However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1 has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide. ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments.


Pssm-ID: 349448 [Multi-domain]  Cd Length: 238  Bit Score: 84.31  E-value: 1.63e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   169 IFMDCGIHAREWVSPAFCQWFVYQ-----ATKTYGRNKIMTKLLDRMNFYILPVFNVDGY----------------IWSW 227
Cdd:cd06229   1 VLYNASFHAREYITTLLLMKFIEDyakayVNKSYIRGKDVGELLNKVTLHIVPMVNPDGVeisqngsnainpyylrLVAW 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   228 TKNRMWRKNRSKNQNskciGTDLNRNFNASWN--SIPNTNDPCADNYRGSAPESEKETKAVTNFIRShlNEIKVYITFHs 305
Cdd:cd06229  81 NKKGTDFTGWKANIR----GVDLNRNFPAGWEkeKRLGPKAPGPRDYPGKEPLSEPETKAMAALTRQ--NDFDLVLAYH- 153
                       170       180
                ....*....|....*....|....*....
gi 187442   306 ySQMLLFPYGYTSKLPPNHEDLA-KVAKI 333
Cdd:cd06229 154 -SQGEEIYWGYNGLEPEESKAMAeKFASV 181
M14_MpaA-like cd06904
Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A and related proteins; ...
142-335 5.75e-15

Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A and related proteins; Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A (MpaA) and related proteins. MpaA is a member of the M14 family of metallocarboxypeptidases (MCPs), however it has an exceptional type of activity, it hydrolyzes the gamma-D-glutamyl-meso-diaminopimelic acid (gamma-D-Glu-Dap) bond in murein peptides. MpaA is specific for cleavage of the gamma-D-Glu-Dap bond of free murein tripeptide; it may also cleave murein tetrapeptide. MpaA has a different substrate specificity and cellular role than endopeptidase I, ENP1 (ENP1 does not belong to this group). MpaA works on free murein peptide in the recycling pathway.


Pssm-ID: 349475 [Multi-domain]  Cd Length: 214  Bit Score: 73.46  E-value: 5.75e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   142 RIKIGSTVEDNPLYVLKIGEKnERRKAIFMdCGIHAREWVSPAFC-QWFVYQATK-TYGRNKImtklldrmnfYILPVFN 219
Cdd:cd06904   1 EKVYGTSVKGRPILAYKFGPG-SRARILII-GGIHGDEPEGVSLVeHLLRWLKNHpASGDFHI----------VVVPCLN 68
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   220 VDGYIwswtknrmwRKNRSkNQNskciGTDLNRNFNAS-WNSIPNTNDpCADNYRGSAPESEKETKAVTNFIRShlNEIK 298
Cdd:cd06904  69 PDGLA---------AGTRT-NAN----GVDLNRNFPTKnWEPDARKPK-DPRYYPGPKPASEPETRALVELIER--FKPD 131
                       170       180       190
                ....*....|....*....|....*....|....*....
gi 187442   299 VYITFHSYSQMLLFPYGYT--SKLPPNHEDLAKVAKIGT 335
Cdd:cd06904 132 RIISLHAPYLVNYDGPAKSllAEKLAQATGYPVVGDVGY 170
M14_CP_bacteria cd18173
bacterial peptidase M14 carboxypeptidase, uncharacterized; This family contains only bacterial ...
118-368 2.11e-14

bacterial peptidase M14 carboxypeptidase, uncharacterized; This family contains only bacterial carboxypeptidase (CP) members of the M14 family of metallocarboxypeptidases (MCPs), mostly of which have yet to be characterized. The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages that would otherwise damage the cell. In addition, all members of the N/E subfamily contain an extra C-terminal domain that is not present in the A/B subfamily. This domain has structural homology to transthyretin and other proteins and has been proposed to function as a folding domain. The active N/E enzymes fulfill a variety of cellular functions, including prohormone processing, regulation of peptide hormone activity, alteration of protein-protein or protein-cell interactions and transcriptional regulation.


Pssm-ID: 349483 [Multi-domain]  Cd Length: 281  Bit Score: 73.00  E-value: 2.11e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   118 KYNNWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIG---EKNERRKAIFMDCGIHAREWVSPAFCQWFVYQAT 194
Cdd:cd18173   3 SYPTYEEYEAMMQSFAANYPNICRLVSIGTSVQGRKLLALKISdnvNTEEAEPEFKYTSTMHGDETTGYELMLRLIDYLL 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   195 KTYGRNKIMTKLLDRMNFYILPVFNVDGYiwSWTKNRMWRKNRSKNQNskciGTDLNRNFnaswnsiPntnDPcADNYRG 274
Cdd:cd18173  83 TNYGTDPRITNLVDNTEIWINPLANPDGT--YAGGNNTVSGATRYNAN----GVDLNRNF-------P---DP-VDGDHP 145
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   275 SAPESEKETKAVTNFIRSH-----LNeikvyitFHSYSQMLLFPYGYTSKLPPnHEDLAKvakigtdVLSTRYETR-YIY 348
Cdd:cd18173 146 DGNGWQPETQAMMNFADEHnfvlsAN-------FHGGAEVVNYPWDTWYSRHP-DDDWFQ-------DISREYADTnQAN 210
                       250       260       270
                ....*....|....*....|....*....|..
gi 187442   349 GP------IESTI------YPISGSSLDWAYD 368
Cdd:cd18173 211 SPpmymseFNNGItngydwYEVYGGRQDYMYY 242
M14_CPD_I cd03868
Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain I subgroup; The ...
119-292 1.43e-10

Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain I subgroup; The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. This Domain I family contains two contiguous surface cysteines that may become palmitoylated and target the enzyme to membranes, thus regulating intracellular trafficking. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down-regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop. In D. melanogaster, the CPD variant 1B short (DmCPD1Bs) is necessary and sufficient for viability of the fruit fly.


Pssm-ID: 349440  Cd Length: 294  Bit Score: 61.88  E-value: 1.43e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   119 YNNWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIGEKNERR---KAIFMDCG-IHAREWVSPafcQWFVYQA- 193
Cdd:cd03868   1 YHNYDELTDLLHKLAETYPNIAKLHSIGKSVQGRELWVLEISDNVNRRepgKPMFKYVAnMHGDETVGR---QLLIYLAq 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   194 --TKTYGRNKIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSKNQNSKciGTDLNRNFNASWNsipNTNDPCADN 271
Cdd:cd03868  78 ylLENYGKDERVTRLVNSTDIHLMPSMNPDGFENSKEGDCSGDPGYGGRENAN--NVDLNRNFPDQFE---DSDDRLLEG 152
                       170       180
                ....*....|....*....|.
gi 187442   272 YrgsapesEKETKAVTNFIRS 292
Cdd:cd03868 153 R-------QPETLAMMKWIVE 166
M14_CPD_III cd06245
Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain III subgroup; ...
119-333 2.55e-10

Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain III subgroup; The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans-Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans-Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down -regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop.


Pssm-ID: 349464 [Multi-domain]  Cd Length: 283  Bit Score: 60.92  E-value: 2.55e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   119 YNNWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIG----EKNERRKAIFMDCGIHAREWVSPAFCQWFVYQAT 194
Cdd:cd06245   1 YHSYKQLSKFLRGLNSNYPTITNLTSLGQSVEKRDIWVLEIGnkpnESEPSEPKILFVGGIHGNAPVGTELLLLLAHFLC 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   195 KTYGRNKIMTKLLDRMNFYILPVFNVDGyiwswtknrmwrknRSKNQNSKCIGTDLNRNFNaswNSIPNTNDPCADNYRG 274
Cdd:cd06245  81 HNYKKDSAITKLLNRTRIHIVPSLNPDG--------------AEKAEEKKCTSKIGEKNAN---GVDLDTDFESNANNRS 143
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 187442   275 SAPesEKETKAVTNFIRshLNEIKVYITFHSYSQMLLFPYGYTSKLPPNHEDLAKVAKI 333
Cdd:cd06245 144 GAA--QPETKAIMDWLK--EKDFTLSVALDGGSLVVTYPYDKPVQTVENKETLKHLAKV 198
M14_CP_N-E_like cd03858
Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase (CP) N/E-like subfamily of ...
119-293 2.87e-10

Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages that would otherwise damage the cell. In addition, all members of the N/E subfamily contain an extra C-terminal domain that is not present in the A/B subfamily. This domain has structural homology to transthyretin and other proteins and has been proposed to function as a folding domain. The active N/E enzymes fulfill a variety of cellular functions, including prohormone processing, regulation of peptide hormone activity, alteration of protein-protein or protein-cell interactions and transcriptional regulation.


Pssm-ID: 349431 [Multi-domain]  Cd Length: 292  Bit Score: 60.74  E-value: 2.87e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   119 YNNWEKIVAWTEKMMDKYPEmVSRI-KIGSTVEDNPLYVLKIGEK-NERRKAI--FMDCG-IHAREWVSPAFCQWFVYQA 193
Cdd:cd03858   1 HHNYEELEEFLKQVAKRYPN-ITRLySIGKSVEGRELWVLEISDNpGVHEPGEpeFKYVAnMHGNEVVGRELLLLLAEYL 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   194 TKTYGRNKIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSkNQNskciGTDLNRNFnaswnsiPNTNDPCADNYR 273
Cdd:cd03858  80 CENYGKDPRVTQLVNSTRIHIMPSMNPDGYEKAQEGDCGGLIGRN-NAN----GVDLNRNF-------PDQFFQVYSDNN 147
                       170       180
                ....*....|....*....|
gi 187442   274 GSAPesekETKAVTNFIRSH 293
Cdd:cd03858 148 PRQP----ETKAVMNWLESI 163
M14_CPM cd03866
Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase M subgroup; Peptidase M14 ...
119-292 9.06e-08

Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase M subgroup; Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the control of peptide hormones and growth factor activity on the cell surface and in the membrane-localized degradation of extracellular proteins, for example it hydrolyses the C-terminal arginine of epidermal growth factor (EGF) resulting in des-Arg-EGF which binds to the EGF receptor (EGFR) with an equal or greater affinity than native EGF. CPM is a required processing enzyme that generates specific agonists for the B1 receptor.


Pssm-ID: 349438  Cd Length: 289  Bit Score: 53.26  E-value: 9.06e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   119 YNNWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIGeKNERRKAIFMD-----CGIHAREWVSPAFCQWFVYQA 193
Cdd:cd03866   1 YHNQEQMETYLKDVNKNYPSITHLHSIGKSVEGRDLWVLVLG-RFPTKHRIGIPefkyvANMHGDEVVGRELLLHLIEFL 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   194 TKTYGRNKIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRsKNQNskciGTDLNRNFNASWNSIPNTNDPcadnyr 273
Cdd:cd03866  80 VTSYGSDPVITRLINSTRIHIMPSMNPDGFEATKKPDCYYTKGR-YNKN----GYDLNRNFPDAFEENNVQRQP------ 148
                       170
                ....*....|....*....
gi 187442   274 gsapesekETKAVTNFIRS 292
Cdd:cd03866 149 --------ETRAVMDWIKN 159
M14_CPD_II cd03863
Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain II subgroup; The ...
130-293 1.78e-06

Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain II subgroup; The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans-Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans-Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down -regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop.


Pssm-ID: 349435 [Multi-domain]  Cd Length: 296  Bit Score: 49.17  E-value: 1.78e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   130 EKMMDKYPEMVSRIKIGSTVEDNPLYVLKIGEK---NERRKAIFMDCG-IHAREWVSPAFCQWFVYQATKTYGRNKIMTK 205
Cdd:cd03863  19 RRYANEYPSITRLYSVGKSVELRELYVMEISDNpgvHEPGEPEFKYIGnMHGNEVVGRELLLNLIEYLCKNFGTDPEVTD 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   206 LLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSKNQNskcigTDLNRNFNASWNSIPNTNDPcadnyrgsapesekETKA 285
Cdd:cd03863  99 LVQNTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNSNN-----YDLNRNFPDQFFQITDPPQP--------------ETLA 159

                ....*...
gi 187442   286 VTNFIRSH 293
Cdd:cd03863 160 VMSWLKTY 167
M14_CP_plant cd18172
Zinc carboxypeptidase, including SOL1, a carboxypeptidase D in plant; This family includes ...
140-293 4.55e-06

Zinc carboxypeptidase, including SOL1, a carboxypeptidase D in plant; This family includes only plant members of the carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). It includes Arabidopsis thaliana SOL1 carboxypeptidase D which is known to possess enzymatic activity to remove the C-terminal arginine residue of CLE19 proprotein in vitro, and SOL1-dependent cleavage of the C-terminal arginine residue is necessary for CLE19 activity in vivo. The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages that would otherwise damage the cell. In addition, all members of the N/E subfamily contain an extra C-terminal domain that is not present in the A/B subfamily. This domain has structural homology to transthyretin and other proteins and has been proposed to function as a folding domain. The active N/E enzymes fulfill a variety of cellular functions, including prohormone processing, regulation of peptide hormone activity, alteration of protein-protein or protein-cell interactions and transcriptional regulation.


Pssm-ID: 349482 [Multi-domain]  Cd Length: 276  Bit Score: 47.79  E-value: 4.55e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   140 VSR-IKIGSTVEDNPLYVLKIGEKNERRKA--IFMDCG-IHAREWVSP----AFCQWfvyqATKTYGRNKIM-TKLLDRM 210
Cdd:cd18172  21 ISRlIVIGSSVNGFPLWALEISDGPGEDETepAFKFVGnMHGDEPVGRelllRLADW----LCANYKAKDPLaAKIVENA 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   211 NFYILPVFNVDGYiwswtknrmwrKNRSKNqNSKciGTDLNRNFNASWNSIPNTNDPCAdnyrgsapeSEKETKAVTNFI 290
Cdd:cd18172  97 HLHLVPTMNPDGF-----------ARRRRN-NAN--NVDLNRDFPDQFFPKNLRNDLAA---------RQPETLAVMNWS 153

                ...
gi 187442   291 RSH 293
Cdd:cd18172 154 RSV 156
M14-like cd03862
Peptidase M14-like domain; uncharacterized subfamily; A functionally uncharacterized subgroup ...
206-368 6.37e-06

Peptidase M14-like domain; uncharacterized subfamily; A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.


Pssm-ID: 349434  Cd Length: 245  Bit Score: 47.04  E-value: 6.37e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   206 LLDRMNFYILPVFNVDGyiwswtknrMWRKNRSkNQNskciGTDLNRNfnASWNSIPNTN--------DPCADNYRGSAp 277
Cdd:cd03862  40 LLEEVRLVVIPIVNPGG---------MALKTRS-NPN----GVDLMRN--APVEAVEKVPflvggqriSPHLPWYRGRN- 102
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   278 ESEKETKAVTNFIRSHLNEIKVYITF--HS---YSQMLLFPYGYTSKLPPNHEDLakVAKIGTDVLSTRYETRYIYGPiE 352
Cdd:cd03862 103 GLETESQALIRYVNEHLLESKMSISLdcHSgfgLVDRIWFPYAHTTEPFPNLAEI--FALIQLFRTSYPHHFLYRFEP-Q 179
                       170
                ....*....|....*.
gi 187442   353 STIYPISGSSLDWAYD 368
Cdd:cd03862 180 SRSYTTHGDLWDYLYD 195
M14_AGBL4_like cd06908
Peptidase M14-like domain of ATP/GTP binding protein AGBL-4 and related proteins; Peptidase ...
140-315 5.90e-05

Peptidase M14-like domain of ATP/GTP binding protein AGBL-4 and related proteins; Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-4, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL4 and the mouse cytosolic carboxypeptidase (CCP)-6. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.


Pssm-ID: 349479  Cd Length: 254  Bit Score: 44.21  E-value: 5.90e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   140 VSRIKIGSTVEDNPLYVLKIGEKN-------ERRKAIFMDCGIHAREWVSPAFCQ----WFVyqatktyGRNKIMTKLLD 208
Cdd:cd06908   3 FTRELLGKSVQQRRLDLLTITDPVnkhltveKKKKVVFITARVHPGETPSSFVCQglidFLV-------SNHPVAKVLRD 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   209 RMNFYILPVFNVDG-YIwswtknrmwrknrsKNQNSKCIGTDLNRNfnasWnsipntNDPcadnyrgsAPESEKETKAVT 287
Cdd:cd06908  76 HLVFKIVPMLNPDGvFL--------------GNYRCSLMGFDLNRH----W------HEP--------SPWAHPTLYAVK 123
                       170       180       190
                ....*....|....*....|....*....|...
gi 187442   288 NFIRSHLNEIKV----YITFHSYSQML-LFPYG 315
Cdd:cd06908 124 NLLRELDNDPTVqldfYIDIHAHSTLMnGFMYG 156
M14_CPN cd03864
Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase N subgroup; Peptidase M14 ...
140-293 1.17e-03

Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase N subgroup; Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3.4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates include peptides found in the bloodstream, such as kinins (e.g. bradykinin, kalinin, met-lys-bradykinin), complement anaphylatoxins and creatine kinase MM (CK-MM). By removing just one amino acid, CPN can alter peptide activity and receptor binding. For example Bradykinin, a nine-residue peptide released from kiningen in response to tissue injury which is inactivated by CPN, anaphylatoxins which are regulated by CPN by the cleaving and removal of their C-terminal arginines resulting in a reduction in their biological activities of 10-100-fold, and creatine kinase MM, a cytosolic enzyme that catalyzes the reversible transfer of a phosphate group from ATP to creatine, and is regulated by CPN by the cleavage of C-terminal lysines. Like the other N/E subfamily members, two surface loops surrounding the active-site groove restrict access to the catalytic center, thus restricting larger protein carboxypeptidase inhibitors from inhibiting CPN.


Pssm-ID: 349436 [Multi-domain]  Cd Length: 313  Bit Score: 40.69  E-value: 1.17e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   140 VSRI-KIGSTVEDNPLYVLKIGEK---NERRKAIFMDCG-IHARE--------WVSPAFCQWFvyqatktYGRNKIMTKL 206
Cdd:cd03864  21 ITRIySIGRSVEGRHLYVLEFSDNpgiHEPLEPEFKYVGnMHGNEvlgrelliQLSEFLCEEY-------RNGNERITRL 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   207 LDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSKNQNSKciGTDLNRNF---------NASWNSiPNTNDPCADNYRGsap 277
Cdd:cd03864  94 IQDTRIHILPSMNPDGYEVAARQGPEFNGYLVGRNNAN--GVDLNRNFpdlntlmyyNEKYGG-PNHHLPLPDNWKS--- 167
                       170
                ....*....|....*.
gi 187442   278 ESEKETKAVTNFIRSH 293
Cdd:cd03864 168 QVEPETLAVIQWMQNY 183
M14_Nna1-like cd18429
Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases; ...
139-255 6.76e-03

Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases; uncharacterized bacterial subgroup; A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP),-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.


Pssm-ID: 349485  Cd Length: 253  Bit Score: 38.21  E-value: 6.76e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187442   139 MVSRIKIGSTVEDNPLYVLKIGEKNERRKaIFMDCGIHARE----WVSPAFCQwfvyqatKTYGRNKIMTKLLDRMNFYI 214
Cdd:cd18429  14 LVEITTIGKTVEGRPLEIIRIGNESAPHR-VFLRARAHPWEaggnWVVEGLVE-------RLLQNDEEAKRFLKRYCVYI 85
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 187442   215 LPVFNVDGYiwSWTKNRMwrknrskNQNskciGTDLNRNFN 255
Cdd:cd18429  86 LPMANKDGV--ARGRTRF-------NAN----GKDLNREWD 113
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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