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Conserved domains on  [gi|186910934|gb|ACC94580|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Drosophila ornatifrons]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 19-147 4.68e-73

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 220.80  E-value: 4.68e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  19 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPF 98
Cdd:MTH00193  14 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPY 93

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 186910934  99 FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:MTH00193  94 LFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTI 142
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 19-147 4.68e-73

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 220.80  E-value: 4.68e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  19 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPF 98
Cdd:MTH00193  14 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPY 93

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 186910934  99 FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:MTH00193  94 LFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTI 142
NADHdh pfam00146
NADH dehydrogenase;
19-147 4.77e-43

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 143.77  E-value: 4.77e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934   19 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPF 98
Cdd:pfam00146   8 PLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPF 87

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 186910934   99 --FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:pfam00146  88 gpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMI 138
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 20-147 4.81e-41

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 139.11  E-value: 4.81e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  20 VLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPFF 99
Cdd:COG1005   22 LLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFG 101

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 186910934 100 --VKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:COG1005  102 pgLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMI 151
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 19-147 4.68e-73

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 220.80  E-value: 4.68e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  19 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPF 98
Cdd:MTH00193  14 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPY 93

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 186910934  99 FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:MTH00193  94 LFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTI 142
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 19-147 1.85e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 198.72  E-value: 1.85e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  19 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPF 98
Cdd:MTH00225  13 CLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPS 92

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 186910934  99 FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:MTH00225  93 MFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTI 141
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 19-147 4.44e-57

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 180.07  E-value: 4.44e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  19 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPF 98
Cdd:MTH00143  13 CVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPS 92

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 186910934  99 FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:MTH00143  93 YFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTI 141
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 20-147 3.35e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 160.06  E-value: 3.35e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  20 VLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPFF 99
Cdd:MTH00111  18 ILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMP 97

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 186910934 100 VKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:MTH00111  98 FPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTI 145
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 19-147 7.59e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 158.75  E-value: 7.59e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  19 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPF 98
Cdd:MTH00195  14 PVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPS 93

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 186910934  99 FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:MTH00195  94 PFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTI 142
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 20-147 1.49e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 158.25  E-value: 1.49e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  20 VLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPFF 99
Cdd:MTH00104  13 ILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPLPMP 92

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 186910934 100 VKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:MTH00104  93 YPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTI 140
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 19-147 1.43e-47

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 155.84  E-value: 1.43e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  19 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPF 98
Cdd:MTH00218  14 PVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPL 93

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 186910934  99 FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:MTH00218  94 PFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTI 142
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 21-147 2.22e-47

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 155.32  E-value: 2.22e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  21 LVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPFFV 100
Cdd:MTH00010  17 LLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKH 96

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 186910934 101 KLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:MTH00010  97 PSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTI 143
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 20-147 3.08e-47

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 155.16  E-value: 3.08e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  20 VLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPFF 99
Cdd:MTH00071  18 VLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMP 97

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 186910934 100 VKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:MTH00071  98 NNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTI 145
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 20-147 2.04e-44

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 147.83  E-value: 2.04e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  20 VLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPFF 99
Cdd:MTH00134  19 VLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMP 98

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 186910934 100 VKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:MTH00134  99 YPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTI 146
NADHdh pfam00146
NADH dehydrogenase;
19-147 4.77e-43

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 143.77  E-value: 4.77e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934   19 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPF 98
Cdd:pfam00146   8 PLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPF 87

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 186910934   99 --FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:pfam00146  88 gpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMI 138
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 20-147 1.59e-42

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 143.19  E-value: 1.59e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  20 VLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPFF 99
Cdd:MTH00040  17 VLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVP 96

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 186910934 100 VKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:MTH00040  97 TPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTI 144
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 20-147 4.81e-41

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 139.11  E-value: 4.81e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  20 VLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPFF 99
Cdd:COG1005   22 LLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFG 101

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 186910934 100 --VKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:COG1005  102 pgLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMI 151
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
20-147 1.69e-37

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 129.93  E-value: 1.69e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  20 VLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPFF 99
Cdd:PRK06076  23 VLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFG 102

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 186910934 100 --VKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:PRK06076 103 peLVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMI 152
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 20-147 4.46e-37

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 129.08  E-value: 4.46e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  20 VLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPF- 98
Cdd:MTH00216  19 LLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYe 98

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 186910934  99 -FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:MTH00216  99 rGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMI 148
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 19-147 6.31e-36

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 126.00  E-value: 6.31e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  19 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPF 98
Cdd:MTH00054  14 PLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPY 93

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 186910934  99 --FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:MTH00054  94 geGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMI 144
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 19-147 1.02e-32

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 116.54  E-value: 1.02e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  19 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVWMCMPF 98
Cdd:MTH00090   8 FILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPY 87

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 186910934  99 FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:MTH00090  88 FFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSI 136
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 20-147 5.60e-29

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 108.18  E-value: 5.60e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  20 VLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLIVW--MCMP 97
Cdd:MTH00029  20 LLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWaiVTMD 99

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 186910934  98 FFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:MTH00029 100 QGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMI 149
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 20-141 1.01e-18

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 79.97  E-value: 1.01e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  20 VLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYpllsnylSYYISPIFSLFLSLIVWMCMPFF 99
Cdd:MTH00058  14 ILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVY-------GFQSRSWFSLFGVFLLVLLVVFY 86

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 186910934 100 VKLYSFNLGG-------LFFLCCTSLGVYTVMVAGWSSNSNYALLGGLR 141
Cdd:MTH00058  87 CFIYGSYYSGsysslslLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIR 135
ndhA CHL00032
NADH dehydrogenase subunit 1
 20-147 8.39e-14

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 66.90  E-value: 8.39e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  20 VLVSVafltLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYISP---IFSLFLSLIVwmcM 96
Cdd:CHL00032  44 VLVIV----WLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPsiaVISILLSYLV---I 116

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 186910934  97 PF---FVkLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAVAQTI 147
Cdd:CHL00032 117 PFgyhLV-LADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSI 169
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
26-143 1.51e-04

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 40.17  E-value: 1.51e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186910934  26 FLTLLERKVLGYIQIRKGPnkvglmGIPQPFCDAIKLFTKEQTYPLLSNYLsYYISPIFSLFLSLIVWMCMPFFVKLYSF 105
Cdd:COG0650   20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYVALAAMLLAALLVPVLTTGPPL 92

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 186910934 106 NLGGLFFLCctsLGVYTV-----MVAGWSSNSNYALLGGLRAV 143
Cdd:COG0650   93 SFSGDLIVL---VYLLALarfflALAGLDSGSPFGGIGASREM 132
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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