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atos homolog protein A isoform 1 [Homo sapiens]
FAM214 family protein( domain architecture ID 10341728)
FAM214 family protein such as proteins FAM214A and FAM214B
List of domain hits
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Name | Accession | Description | Interval | E-value | ||||
Chromosome_seg | pfam13889 | Chromosome segregation during meiosis; The proteins come from eukaryotes, plants and animals, ... |
1018-1075 | 4.02e-21 | ||||
Chromosome segregation during meiosis; The proteins come from eukaryotes, plants and animals, and are necessary for chromosome segregation during meiosis. : Pssm-ID: 464021 Cd Length: 55 Bit Score: 87.64 E-value: 4.02e-21
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DUF4210 super family | cl16474 | Domain of unknown function (DUF4210); This short domain is found in fungi, plants and animals, ... |
878-935 | 1.84e-12 | ||||
Domain of unknown function (DUF4210); This short domain is found in fungi, plants and animals, and the proteins appear to be necessary for chromosome segregation during meiosis. The actual alignment was detected with superfamily member pfam13915: Pssm-ID: 404751 Cd Length: 66 Bit Score: 63.07 E-value: 1.84e-12
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SCP-1 super family | cl30946 | Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
592-788 | 3.15e-05 | ||||
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase. The actual alignment was detected with superfamily member pfam05483: Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 48.18 E-value: 3.15e-05
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TroA-like super family | cl00262 | Helical backbone metal receptor (TroA-like domain). These proteins have been shown to function ... |
470-520 | 5.33e-03 | ||||
Helical backbone metal receptor (TroA-like domain). These proteins have been shown to function in the ABC transport of ferric siderophores and metal ions such as Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is formed in the interface between two globular domains linked by a single helix. Many of these proteins also possess a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence). The TroA-like proteins differ in their fold and ligand-binding mechanism from the PBPI and PBPII proteins, but are structurally similar, however, to the beta-subunit of the nitrogenase molybdenum-iron protein MoFe. Most TroA-like proteins are encoded by ABC-type operons and appear to function as periplasmic components of ABC transporters in metal ion uptake. The actual alignment was detected with superfamily member PRK11411: Pssm-ID: 469696 [Multi-domain] Cd Length: 303 Bit Score: 40.04 E-value: 5.33e-03
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Name | Accession | Description | Interval | E-value | |||||
Chromosome_seg | pfam13889 | Chromosome segregation during meiosis; The proteins come from eukaryotes, plants and animals, ... |
1018-1075 | 4.02e-21 | |||||
Chromosome segregation during meiosis; The proteins come from eukaryotes, plants and animals, and are necessary for chromosome segregation during meiosis. Pssm-ID: 464021 Cd Length: 55 Bit Score: 87.64 E-value: 4.02e-21
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DUF4210 | pfam13915 | Domain of unknown function (DUF4210); This short domain is found in fungi, plants and animals, ... |
878-935 | 1.84e-12 | |||||
Domain of unknown function (DUF4210); This short domain is found in fungi, plants and animals, and the proteins appear to be necessary for chromosome segregation during meiosis. Pssm-ID: 404751 Cd Length: 66 Bit Score: 63.07 E-value: 1.84e-12
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SCP-1 | pfam05483 | Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
592-788 | 3.15e-05 | |||||
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase. Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 48.18 E-value: 3.15e-05
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235kDa-fam | TIGR01612 | reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
522-758 | 6.74e-05 | |||||
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii. Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 47.35 E-value: 6.74e-05
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fecB | PRK11411 | iron-dicitrate transporter substrate-binding subunit; Provisional |
470-520 | 5.33e-03 | |||||
iron-dicitrate transporter substrate-binding subunit; Provisional Pssm-ID: 183123 [Multi-domain] Cd Length: 303 Bit Score: 40.04 E-value: 5.33e-03
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Name | Accession | Description | Interval | E-value | |||||
Chromosome_seg | pfam13889 | Chromosome segregation during meiosis; The proteins come from eukaryotes, plants and animals, ... |
1018-1075 | 4.02e-21 | |||||
Chromosome segregation during meiosis; The proteins come from eukaryotes, plants and animals, and are necessary for chromosome segregation during meiosis. Pssm-ID: 464021 Cd Length: 55 Bit Score: 87.64 E-value: 4.02e-21
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DUF4210 | pfam13915 | Domain of unknown function (DUF4210); This short domain is found in fungi, plants and animals, ... |
878-935 | 1.84e-12 | |||||
Domain of unknown function (DUF4210); This short domain is found in fungi, plants and animals, and the proteins appear to be necessary for chromosome segregation during meiosis. Pssm-ID: 404751 Cd Length: 66 Bit Score: 63.07 E-value: 1.84e-12
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SCP-1 | pfam05483 | Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
592-788 | 3.15e-05 | |||||
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase. Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 48.18 E-value: 3.15e-05
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235kDa-fam | TIGR01612 | reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
522-758 | 6.74e-05 | |||||
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii. Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 47.35 E-value: 6.74e-05
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fecB | PRK11411 | iron-dicitrate transporter substrate-binding subunit; Provisional |
470-520 | 5.33e-03 | |||||
iron-dicitrate transporter substrate-binding subunit; Provisional Pssm-ID: 183123 [Multi-domain] Cd Length: 303 Bit Score: 40.04 E-value: 5.33e-03
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Blast search parameters | ||||
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