NCBI Conserved Domain Search

Conserved domains on [gi|1865334350|gb|QLD22649|]

View

ATP synthase F0 subunit 8 (mitochondrion) [Hadrosciurus ignitus]

Protein Classification

ATP synthase protein 8( domain architecture ID 10009565)

ATP synthase protein 8 is a component of mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

Zoom to residue level

show extra options »

Show site features Horizontal zoom: ×

List of domain hits

Name

Accession

Description

Interval

E-value

ATP8

MTH00102

ATP synthase F0 subunit 8; Validated

1-67

1.00e-29

ATP synthase F0 subunit 8; Validated

Pssm-ID: 214420 Cd Length: 67 Bit Score: 99.15 E-value: 1.00e-29

                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1865334350  1 MPQLDTSTWFTTITSMILALFILFQSKITNHTFFLSPSHKDMKQITHSTPWEKKWTKIYLPLSLPQH 67
Cdd:MTH00102   1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPKSLKTKKQNTPWEKKWTKIYLPLSLPLQ 67

Name

Accession

Description

Interval

E-value

ATP8

MTH00102

ATP synthase F0 subunit 8; Validated

1-67

1.00e-29

ATP synthase F0 subunit 8; Validated

Pssm-ID: 214420 Cd Length: 67 Bit Score: 99.15 E-value: 1.00e-29

                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1865334350  1 MPQLDTSTWFTTITSMILALFILFQSKITNHTFFLSPSHKDMKQITHSTPWEKKWTKIYLPLSLPQH 67
Cdd:MTH00102   1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPKSLKTKKQNTPWEKKWTKIYLPLSLPLQ 67

ATP-synt_8

pfam00895

ATP synthase protein 8;

1-55

1.19e-11

ATP synthase protein 8;

Pssm-ID: 459986 Cd Length: 54 Bit Score: 53.50 E-value: 1.19e-11

                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1865334350  1 MPQLDTSTWFTTITSMILALFILFQSKITNHTfFLSPSHKDMKQITHSTPWEKKW 55
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHT-PTNPPPKSLKTTKHPNPWEWKW 54

Name

Accession

Description

Interval

E-value

ATP8

MTH00102

ATP synthase F0 subunit 8; Validated

1-67

1.00e-29

ATP synthase F0 subunit 8; Validated

Pssm-ID: 214420 Cd Length: 67 Bit Score: 99.15 E-value: 1.00e-29

                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1865334350  1 MPQLDTSTWFTTITSMILALFILFQSKITNHTFFLSPSHKDMKQITHSTPWEKKWTKIYLPLSLPQH 67
Cdd:MTH00102   1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPKSLKTKKQNTPWEKKWTKIYLPLSLPLQ 67

ATP-synt_8

pfam00895

ATP synthase protein 8;

1-55

1.19e-11

ATP synthase protein 8;

Pssm-ID: 459986 Cd Length: 54 Bit Score: 53.50 E-value: 1.19e-11

                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1865334350  1 MPQLDTSTWFTTITSMILALFILFQSKITNHTfFLSPSHKDMKQITHSTPWEKKW 55
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHT-PTNPPPKSLKTTKHPNPWEWKW 54

ATP8

MTH00123

ATP synthase F0 subunit 8; Provisional

1-51

1.63e-03

ATP synthase F0 subunit 8; Provisional

Pssm-ID: 214426 Cd Length: 54 Bit Score: 32.55 E-value: 1.63e-03

                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 1865334350  1 MPQLDTSTWFTTITSMILALFILFQSKITNHTFFLSPSHKDMKQITHSTPW 51
Cdd:MTH00123   1 MPQLNPAPWFLIMLLTWLTLILIIQPKILSFTPTNNPTKTNTTTNTTPWTW 51

Blast search parameters

Data Source:	Precalculated data, version = cdd.v.3.21
Preset Options:	Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01