NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1864680992|ref|WP_176867116|]
View 

basic amino acid/polyamine antiporter [Ruegeria haliotis]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
2A0302 super family cl30120
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
19-499 6.37e-142

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00905:

Pssm-ID: 129983  Cd Length: 473  Bit Score: 416.38  E-value: 6.37e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  19 SASPKKLGLFAMTLLVVSAMFGGGVFNIPQNMAQSAALGAILIAWMISGLGIFFLARSFQVLADIRPEMTSGIYMYARAG 98
Cdd:TIGR00905   3 EAKSKKLGLFALTALVIGSMIGSGIFSLPQNLASVAGPGAVIIGWIITGVGMLALAFVFAILATKKPELDGGIYAYAREG 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  99 FGKLAGFLIAWGYWLSVAFGNVGYAVLMMDALNYFFPpYFAGGNTWQATLGSSAIIWGLCFLVMRGVKGASLLNNIGTVA 178
Cdd:TIGR00905  83 FGPYIGFMSGWGYWLSAWIGNVAYAVLLFSALGYFFP-LFGSGNPVPSILGASVLLWVFTFLVLRGVRQAAFINTITTIA 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 179 KFVPATLFLLVVLyFSFSRDLFTSDFWGNLTDQarqdkpLGGVVEQIKGTMLVTLWMYIGIESAVVMSNRSDAK-TVSRA 257
Cdd:TIGR00905 162 KLIPLFLFIIIGW-FWFKLDLFTADFWGHDVPS------LGSVFSQVKNTMLVTLWVFIGIEGAVVSSGRAKNKsDVGKA 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 258 TLLGYFIVTVLFVLVSVLPFGVMSQGELSTLAPPSTSAILGSLVGLWGEVLINVGVIIALLSSWLVWTLLVAELPWACAK 337
Cdd:TIGR00905 235 TVLGTLGALVIYILITLLSLGVLPQQELANLPNPSMAAVLEMIVGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAK 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 338 DGTFPKMFAKTNVAGIASVSLIISTAIMQAAIILVYFSDNAWNLMLSITGVVILPAYIGSAAFLWKLIATGAYPstaKMG 417
Cdd:TIGR00905 315 DGLFPKIFGRVNKNGAPSVALLLTNILIQLFLLLTLLTSSAYNVLVSLAVVMILVPYLLSAAYLLKLAKVGTYP---KIK 391
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 418 KASALIISLLATGFGLWLVYAAGVQFMLAGAVIYAAGIPVFYWARRsgTPGERAFSGSEAVAAVGLFLVAVAAIWMLIDG 497
Cdd:TIGR00905 392 NRKALIVGVIACVYSIWLLYAAGLKYLLLGFILYAPGIIFYGRARK--ERGKHVFNKKEILIATIIVIAAIIAIWLLVNG 469

                  ..
gi 1864680992 498 RL 499
Cdd:TIGR00905 470 SI 471
 
Name Accession Description Interval E-value
2A0302 TIGR00905
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
19-499 6.37e-142

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129983  Cd Length: 473  Bit Score: 416.38  E-value: 6.37e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  19 SASPKKLGLFAMTLLVVSAMFGGGVFNIPQNMAQSAALGAILIAWMISGLGIFFLARSFQVLADIRPEMTSGIYMYARAG 98
Cdd:TIGR00905   3 EAKSKKLGLFALTALVIGSMIGSGIFSLPQNLASVAGPGAVIIGWIITGVGMLALAFVFAILATKKPELDGGIYAYAREG 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  99 FGKLAGFLIAWGYWLSVAFGNVGYAVLMMDALNYFFPpYFAGGNTWQATLGSSAIIWGLCFLVMRGVKGASLLNNIGTVA 178
Cdd:TIGR00905  83 FGPYIGFMSGWGYWLSAWIGNVAYAVLLFSALGYFFP-LFGSGNPVPSILGASVLLWVFTFLVLRGVRQAAFINTITTIA 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 179 KFVPATLFLLVVLyFSFSRDLFTSDFWGNLTDQarqdkpLGGVVEQIKGTMLVTLWMYIGIESAVVMSNRSDAK-TVSRA 257
Cdd:TIGR00905 162 KLIPLFLFIIIGW-FWFKLDLFTADFWGHDVPS------LGSVFSQVKNTMLVTLWVFIGIEGAVVSSGRAKNKsDVGKA 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 258 TLLGYFIVTVLFVLVSVLPFGVMSQGELSTLAPPSTSAILGSLVGLWGEVLINVGVIIALLSSWLVWTLLVAELPWACAK 337
Cdd:TIGR00905 235 TVLGTLGALVIYILITLLSLGVLPQQELANLPNPSMAAVLEMIVGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAK 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 338 DGTFPKMFAKTNVAGIASVSLIISTAIMQAAIILVYFSDNAWNLMLSITGVVILPAYIGSAAFLWKLIATGAYPstaKMG 417
Cdd:TIGR00905 315 DGLFPKIFGRVNKNGAPSVALLLTNILIQLFLLLTLLTSSAYNVLVSLAVVMILVPYLLSAAYLLKLAKVGTYP---KIK 391
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 418 KASALIISLLATGFGLWLVYAAGVQFMLAGAVIYAAGIPVFYWARRsgTPGERAFSGSEAVAAVGLFLVAVAAIWMLIDG 497
Cdd:TIGR00905 392 NRKALIVGVIACVYSIWLLYAAGLKYLLLGFILYAPGIIFYGRARK--ERGKHVFNKKEILIATIIVIAAIIAIWLLVNG 469

                  ..
gi 1864680992 498 RL 499
Cdd:TIGR00905 470 SI 471
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
18-471 2.86e-50

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 177.78  E-value: 2.86e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  18 KSASPKKLGLFAMTLLVVSAMFGGGVFNIPQNMAQSAAlGAILIAWMISGLGIFFLARSFQVLADIRPEmTSGIYMYARA 97
Cdd:COG0531     6 SSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAG-PAAILAWLIAGLLALLVALSYAELASAFPR-AGGAYTYARR 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  98 GFGKLAGFLIAWGYWLSVAFGNVGYAVLMMDALNYFFPpyfaggnTWQATLGSSAIIWGLCFLVMRGVKGASLLNNIGTV 177
Cdd:COG0531    84 ALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFP-------AGGSVLIALVLILLLTLLNLRGVKESAKVNNILTV 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 178 AKFVPATLFLLVVLYFsfsrdlFTSDFWGNLTdqarqdkPLGGVVEQIKGTMLVTLWMYIGIESAVVMSN--RSDAKTVS 255
Cdd:COG0531   157 LKLLVLLLFIVVGLFA------FDPANFTPFL-------PAGGGLSGVLAALALAFFAFTGFEAIANLAEeaKNPKRNIP 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 256 RATLLGYFIVTVLFVLVSVLPFGVMSQGELSTLAPPsTSAILGSLVGLWGEVLINVGVIIALLSSWLVWTLLVAELPWAC 335
Cdd:COG0531   224 RAIILSLLIVGVLYILVSLALTGVVPYDELAASGAP-LADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAM 302
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 336 AKDGTFPKMFAKTNVA-GIASVSLIISTAImqaAIILVYFSDNAWNLMLSITGVVILPAYIGSAAFLWKLIATgaYPSTA 414
Cdd:COG0531   303 ARDGLLPKVFAKVHPRfGTPVNAILLTGVI---ALLLLLLGAASFTALASLASVGVLLAYLLVALAVIVLRRR--RPDLP 377
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1864680992 415 KMGKASALIISLLATGFGLWLVYAAGVQFMLAGAVIYAAGIPVFYWARRSGTPGERA 471
Cdd:COG0531   378 RPFRVPLPLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKLLKE 434
PRK10644 PRK10644
arginine/agmatine antiporter;
19-455 1.05e-33

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 132.61  E-value: 1.05e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  19 SASPKKLGLFAMTLLVVSAMFGGGVFNIPQNMAQSAalGAILIAWMISGLGIFFLARSFQVLADIRPEmTSGIYMYARAG 98
Cdd:PRK10644    4 DADAHKVGLIPVTLMVAGNIMGSGVFLLPANLASTG--GIAIYGWLVTIIGALGLSMVYAKMSSLDPS-PGGSYAYARRC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  99 FGKLAGFLIAWGYWLSVAFGNVGYAVLMMDALNYFFPpyfAGGNTWQATLGSSAIIWGLCFLVMRGVKGASLLNNIGTVA 178
Cdd:PRK10644   81 FGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFP---ILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVL 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 179 KFVPaTLFLLVVLYFSFSRDLFTSDFwgNLTDQarqdkplgGVVEQIKGTMLVTLWMYIGIESAVVMSN--RSDAKTVSR 256
Cdd:PRK10644  158 ALIP-IVGIAVFGWFWFRGETYMAAW--NVSGL--------GTFGAIQSTLNVTLWSFIGVESASVAAGvvKNPKRNVPI 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 257 ATLLGYFIVTVLFVLVSVLPFGVMSQGELSTLAPPSTSAILGSLvGLWGEVLINVGVIIALLSSWLVWTLLVAELPWACA 336
Cdd:PRK10644  227 ATIGGVLIAAVCYVLSSTAIMGMIPNAALRVSASPFGDAARMAL-GDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAA 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 337 KDGTFPKMFAKTNVAGIASVSLIISTAIMqAAIILVYFSDNA---WNLMLSITGVVILPAYIGSAAFLwKLIATGaypst 413
Cdd:PRK10644  306 DDGLFPPIFARVNKAGTPVAGLLIVGVLM-TIFQLSSISPNAskeFGLVSSVSVIFTLVPYLYTCAAL-LLLGHG----- 378
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1864680992 414 aKMGKASA--LIISLLATGFGLWLVYAAGVQ-------FMLAGAVIYAAGI 455
Cdd:PRK10644  379 -HFGKARPayLAVTLIAFVYCIWAVVGSGAKevmwsfvTLMVITAFYALNY 428
AA_permease_2 pfam13520
Amino acid permease;
25-404 9.75e-33

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 129.35  E-value: 9.75e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  25 LGLFAMTLLVVSAMFGGGVFniPQNMAQSAALGAILIAWMISGLGIFFLARSFQVLADIRPeMTSGIYMYARAGFGKLAG 104
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIF--VAPLVASGGPALIVWGWIAAIIFSLAVGLVYAELSSALP-RSGGIYVYLENAFGKFVA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 105 FLIAWGYWLSVAFGNVGYAVLMMDALNYFFPPYFaGGNTWQATLGSSAIIWGLCFLVMRGVKGASLLNNIGTVAKFVPAT 184
Cdd:pfam13520  78 FLAGWSNWFAYVLGLASSASVAASYLLSALGPDL-VPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLLPL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 185 LFLLVVLYFSFSRDLFTSDFWGNLTdqarqdkPLGGVVEQIKGTMLVTLWMYIGIESAVVMSNRSDAKTVSRATLLGYFI 264
Cdd:pfam13520 157 ILIIILGLVTADGGGFNLLSGEWHT-------FFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKKRNVPKAIFIGVII 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 265 VTVLFVLVSVLPFGVMSQGELSTLAP-PSTSAILGSLVGL-WGEVLINVGVIIALLSSWLVWTLLVAELPWACAKDGTFP 342
Cdd:pfam13520 230 VGVLYILVNIAFFGVVPDDEIALSSGlGQVAALLFQAVGGkWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLP 309
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1864680992 343 --KMFAKTNVAGIASVSLIISTAIMQAAIILVYFSDNAWNLMLSITGVVILPAYIGSAAFLWKL 404
Cdd:pfam13520 310 fsRFFAKVNKFGSPIRAIILTAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLIL 373
 
Name Accession Description Interval E-value
2A0302 TIGR00905
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
19-499 6.37e-142

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129983  Cd Length: 473  Bit Score: 416.38  E-value: 6.37e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  19 SASPKKLGLFAMTLLVVSAMFGGGVFNIPQNMAQSAALGAILIAWMISGLGIFFLARSFQVLADIRPEMTSGIYMYARAG 98
Cdd:TIGR00905   3 EAKSKKLGLFALTALVIGSMIGSGIFSLPQNLASVAGPGAVIIGWIITGVGMLALAFVFAILATKKPELDGGIYAYAREG 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  99 FGKLAGFLIAWGYWLSVAFGNVGYAVLMMDALNYFFPpYFAGGNTWQATLGSSAIIWGLCFLVMRGVKGASLLNNIGTVA 178
Cdd:TIGR00905  83 FGPYIGFMSGWGYWLSAWIGNVAYAVLLFSALGYFFP-LFGSGNPVPSILGASVLLWVFTFLVLRGVRQAAFINTITTIA 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 179 KFVPATLFLLVVLyFSFSRDLFTSDFWGNLTDQarqdkpLGGVVEQIKGTMLVTLWMYIGIESAVVMSNRSDAK-TVSRA 257
Cdd:TIGR00905 162 KLIPLFLFIIIGW-FWFKLDLFTADFWGHDVPS------LGSVFSQVKNTMLVTLWVFIGIEGAVVSSGRAKNKsDVGKA 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 258 TLLGYFIVTVLFVLVSVLPFGVMSQGELSTLAPPSTSAILGSLVGLWGEVLINVGVIIALLSSWLVWTLLVAELPWACAK 337
Cdd:TIGR00905 235 TVLGTLGALVIYILITLLSLGVLPQQELANLPNPSMAAVLEMIVGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAK 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 338 DGTFPKMFAKTNVAGIASVSLIISTAIMQAAIILVYFSDNAWNLMLSITGVVILPAYIGSAAFLWKLIATGAYPstaKMG 417
Cdd:TIGR00905 315 DGLFPKIFGRVNKNGAPSVALLLTNILIQLFLLLTLLTSSAYNVLVSLAVVMILVPYLLSAAYLLKLAKVGTYP---KIK 391
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 418 KASALIISLLATGFGLWLVYAAGVQFMLAGAVIYAAGIPVFYWARRsgTPGERAFSGSEAVAAVGLFLVAVAAIWMLIDG 497
Cdd:TIGR00905 392 NRKALIVGVIACVYSIWLLYAAGLKYLLLGFILYAPGIIFYGRARK--ERGKHVFNKKEILIATIIVIAAIIAIWLLVNG 469

                  ..
gi 1864680992 498 RL 499
Cdd:TIGR00905 470 SI 471
arg_ornith_anti TIGR03810
arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine ...
23-499 2.07e-132

arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 163522  Cd Length: 468  Bit Score: 392.11  E-value: 2.07e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  23 KKLGLFAMTLLVVSAMFGGGVFNIPQNMAQSAALGAILIAWMISGLGIFFLARSFQVLADIRPEMTSGIYMYARAGFGKL 102
Cdd:TIGR03810   1 KKLGLGALTALVVGSMIGSGIFSLPSDMAAGAAAGAVLIGWVITGVGMLALAFSFQNLANKKPELDGGVYSYAKAGFGPF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 103 AGFLIAWGYWLSVAFGNVGYAVLMMDALNYFFpPYFAGGNTWQATLGSSAIIWGLCFLVMRGVKGASLLNNIGTVAKFVP 182
Cdd:TIGR03810  81 MGFISAWGYWLSAWLGNVAYATLLFSTLGYFF-PIFGGGNNPPSIIGASVLLWCVHFLVLRGVEGAAFINTITTIAKLVP 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 183 ATLFlLVVLYFSFSRDLFTSDFWGNLTDQArqdkPLGGVVEQIKGTMLVTLWMYIGIESAVVMSNRSDAKT-VSRATLLG 261
Cdd:TIGR03810 160 LFVF-IVIGIFAFKGDTFTNDFWGNANGGF----SLGSVMTQVKNMMLVTVWVFIGIEGASMLSARAEKRSdVGKATVIG 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 262 YFIVTVLFVLVSVLPFGVMSQGELSTLAPPSTSAILGSLVGLWGEVLINVGVIIALLSSWLVWTLLVAELPWACAKDGTF 341
Cdd:TIGR03810 235 LIGVLAIYVLVSVLSYGIMTQAQLAGLKNPSMAYVLEHMVGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLM 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 342 PKMFAKTNVAGIASVSLIISTAIMQAAIILVYFSDNAWNLMLSITGVVILPAYIGSAAFLWKLiatgAYPSTAKMGKASA 421
Cdd:TIGR03810 315 PKYFGKENANGAPTNALWLTNGLIQIFLLTTLFSEQAYNFAISLATSAILVPYLWSAAYQVKL----SWRGGQERGRRKQ 390
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1864680992 422 LIISLLATGFGLWLVYAAGVQFMLAGAVIYAAGIPVFYWARRSGtpGERAFSGSEAVAAVGLFLVAVAAIWMLIDGRL 499
Cdd:TIGR03810 391 LLIGLVALLYAVWLIYAAGLKYLLLSAILYAPGIYFYARARKEK--GGPVFTKGELLIFAAIVAGAVIAIYLLATGLI 466
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
18-471 2.86e-50

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 177.78  E-value: 2.86e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  18 KSASPKKLGLFAMTLLVVSAMFGGGVFNIPQNMAQSAAlGAILIAWMISGLGIFFLARSFQVLADIRPEmTSGIYMYARA 97
Cdd:COG0531     6 SSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAG-PAAILAWLIAGLLALLVALSYAELASAFPR-AGGAYTYARR 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  98 GFGKLAGFLIAWGYWLSVAFGNVGYAVLMMDALNYFFPpyfaggnTWQATLGSSAIIWGLCFLVMRGVKGASLLNNIGTV 177
Cdd:COG0531    84 ALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFP-------AGGSVLIALVLILLLTLLNLRGVKESAKVNNILTV 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 178 AKFVPATLFLLVVLYFsfsrdlFTSDFWGNLTdqarqdkPLGGVVEQIKGTMLVTLWMYIGIESAVVMSN--RSDAKTVS 255
Cdd:COG0531   157 LKLLVLLLFIVVGLFA------FDPANFTPFL-------PAGGGLSGVLAALALAFFAFTGFEAIANLAEeaKNPKRNIP 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 256 RATLLGYFIVTVLFVLVSVLPFGVMSQGELSTLAPPsTSAILGSLVGLWGEVLINVGVIIALLSSWLVWTLLVAELPWAC 335
Cdd:COG0531   224 RAIILSLLIVGVLYILVSLALTGVVPYDELAASGAP-LADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAM 302
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 336 AKDGTFPKMFAKTNVA-GIASVSLIISTAImqaAIILVYFSDNAWNLMLSITGVVILPAYIGSAAFLWKLIATgaYPSTA 414
Cdd:COG0531   303 ARDGLLPKVFAKVHPRfGTPVNAILLTGVI---ALLLLLLGAASFTALASLASVGVLLAYLLVALAVIVLRRR--RPDLP 377
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1864680992 415 KMGKASALIISLLATGFGLWLVYAAGVQFMLAGAVIYAAGIPVFYWARRSGTPGERA 471
Cdd:COG0531   378 RPFRVPLPLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKLLKE 434
PRK10644 PRK10644
arginine/agmatine antiporter;
19-455 1.05e-33

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 132.61  E-value: 1.05e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  19 SASPKKLGLFAMTLLVVSAMFGGGVFNIPQNMAQSAalGAILIAWMISGLGIFFLARSFQVLADIRPEmTSGIYMYARAG 98
Cdd:PRK10644    4 DADAHKVGLIPVTLMVAGNIMGSGVFLLPANLASTG--GIAIYGWLVTIIGALGLSMVYAKMSSLDPS-PGGSYAYARRC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  99 FGKLAGFLIAWGYWLSVAFGNVGYAVLMMDALNYFFPpyfAGGNTWQATLGSSAIIWGLCFLVMRGVKGASLLNNIGTVA 178
Cdd:PRK10644   81 FGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFP---ILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVL 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 179 KFVPaTLFLLVVLYFSFSRDLFTSDFwgNLTDQarqdkplgGVVEQIKGTMLVTLWMYIGIESAVVMSN--RSDAKTVSR 256
Cdd:PRK10644  158 ALIP-IVGIAVFGWFWFRGETYMAAW--NVSGL--------GTFGAIQSTLNVTLWSFIGVESASVAAGvvKNPKRNVPI 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 257 ATLLGYFIVTVLFVLVSVLPFGVMSQGELSTLAPPSTSAILGSLvGLWGEVLINVGVIIALLSSWLVWTLLVAELPWACA 336
Cdd:PRK10644  227 ATIGGVLIAAVCYVLSSTAIMGMIPNAALRVSASPFGDAARMAL-GDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAA 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 337 KDGTFPKMFAKTNVAGIASVSLIISTAIMqAAIILVYFSDNA---WNLMLSITGVVILPAYIGSAAFLwKLIATGaypst 413
Cdd:PRK10644  306 DDGLFPPIFARVNKAGTPVAGLLIVGVLM-TIFQLSSISPNAskeFGLVSSVSVIFTLVPYLYTCAAL-LLLGHG----- 378
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1864680992 414 aKMGKASA--LIISLLATGFGLWLVYAAGVQ-------FMLAGAVIYAAGI 455
Cdd:PRK10644  379 -HFGKARPayLAVTLIAFVYCIWAVVGSGAKevmwsfvTLMVITAFYALNY 428
AA_permease_2 pfam13520
Amino acid permease;
25-404 9.75e-33

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 129.35  E-value: 9.75e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  25 LGLFAMTLLVVSAMFGGGVFniPQNMAQSAALGAILIAWMISGLGIFFLARSFQVLADIRPeMTSGIYMYARAGFGKLAG 104
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIF--VAPLVASGGPALIVWGWIAAIIFSLAVGLVYAELSSALP-RSGGIYVYLENAFGKFVA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 105 FLIAWGYWLSVAFGNVGYAVLMMDALNYFFPPYFaGGNTWQATLGSSAIIWGLCFLVMRGVKGASLLNNIGTVAKFVPAT 184
Cdd:pfam13520  78 FLAGWSNWFAYVLGLASSASVAASYLLSALGPDL-VPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLLPL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 185 LFLLVVLYFSFSRDLFTSDFWGNLTdqarqdkPLGGVVEQIKGTMLVTLWMYIGIESAVVMSNRSDAKTVSRATLLGYFI 264
Cdd:pfam13520 157 ILIIILGLVTADGGGFNLLSGEWHT-------FFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKKRNVPKAIFIGVII 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 265 VTVLFVLVSVLPFGVMSQGELSTLAP-PSTSAILGSLVGL-WGEVLINVGVIIALLSSWLVWTLLVAELPWACAKDGTFP 342
Cdd:pfam13520 230 VGVLYILVNIAFFGVVPDDEIALSSGlGQVAALLFQAVGGkWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLP 309
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1864680992 343 --KMFAKTNVAGIASVSLIISTAIMQAAIILVYFSDNAWNLMLSITGVVILPAYIGSAAFLWKL 404
Cdd:pfam13520 310 fsRFFAKVNKFGSPIRAIILTAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLIL 373
cadB PRK10435
cadaverine/lysine antiporter;
19-391 4.91e-22

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 98.28  E-value: 4.91e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  19 SASPKKLGLFAMTLLVVSAMFGGGVFNIPQNMAqsaALGAILI-AWMISGLGIFFLARSFQVLADIRPEMTSGIymyARA 97
Cdd:PRK10435    1 MSSAKKIGLFACTGVVAGNMMGSGIALLPANLA---SIGSIAIwGWIISIIGAMSLAYVYARLATKNPQQGGPI---AYA 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  98 G-FGKLAGFLIAWGYWLSVAFGNVGYAVLMMDALNYFFPpyfAGGNTWQATLGSSAIIWGLCFLVMRGVKGASLLNNIGT 176
Cdd:PRK10435   75 GeISPAFGFQTGVLYYHANWIGNLAIGITAVSYLSTFFP---VLNDPIPAGIACIAIVWVFTFVNMLGGTWVSRLTTIGL 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 177 VAKFVPATLfLLVVLYFSFSRDLFtsdfwgnltdQARQDKPLGGVVEQIKGTMLVTLWMYIGIESAVVMSN--RSDAKTV 254
Cdd:PRK10435  152 VLVLIPVVG-TAIVGWHWFDAATY----------AANWNTSDTTDGHAIIKSILLCLWAFVGVESAAVSTGmvKNPKRTV 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 255 SRATLLGYFIVTVLFVLVSVLPFGVMSQGELSTLAPP---STSAILGSlvglWGEVLINVGVIIALLSSWLVWTLLVAEL 331
Cdd:PRK10435  221 PLATMLGTGLAGIIYIAATQVISGMFPASVMAASGAPfaiSASTILGN----WAAPLVSAFTAFACLTSLGSWMMLVGQA 296
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1864680992 332 PWACAKDGTFPKMFAKTNVAGIASVSLIISTAIMQAAIILVYF----SDNAWNLMLSITGVVIL 391
Cdd:PRK10435  297 GVRAANDGNFPKVYGEVDKNGIPKKGLLLAAVKMTALMILITLmnssGGKASDLFGELTGIAVL 360
potE PRK10655
putrescine transporter; Provisional
19-454 9.01e-19

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 88.55  E-value: 9.01e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  19 SASPKKLGLFAMTLLVVSAMFGGGVFNIPQNMAQsaaLGAI-LIAWMISGLGIFFLARSFqVLADIRPEMTSGIYMYARA 97
Cdd:PRK10655    2 SAKSNKMGVVQLTILTAVNMMGSGIIMLPTKLAQ---VGTIsILSWLVTAVGSMALAYAF-AKCGMFSRKSGGMGGYAEY 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  98 GFGKLAGFLIAWGYWLSVAFGNVGYAVLMMDALNYFFPPYFAGGNTWQATLGssaIIWgLCFLVMRGvkGASLLNNIG-- 175
Cdd:PRK10655   78 AFGKSGNFMANYTYGVSLLIANVAIAISAVGYGTELFGATLSPVQICLATIG---VLW-LCTVANFG--GARITGQISsv 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 176 TVAKFVPATLFLLVVLYFSFSRDLFTSDFWGNltdqarqDKPLGgvvEQIKGTMLVTLWMYIGIESAVVMSNRSD--AKT 253
Cdd:PRK10655  152 TVWGVIIPVVGLSIIGWFWFSPSLYVAAWNPH-------HLPFF---SAVGSSIAMTLWAFLGLESACANSDAVEnpERN 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 254 VSRATLLGYFIVTVLFVLVSVLPFGVMSQGELSTLAPP---STSAILGSLVGlwgeVLINVGVIIALLSSWLVWTLLVAE 330
Cdd:PRK10655  222 VPIAVLGGTLGAAVIYIVSTNVIAGIVPNMELANSTAPfglAFAQMFNPTVG----KIVMALMVMSCCGSLLGWQFTIAQ 297
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 331 LPWACAKDGTFPKMFAKTNVAGIASVSLIISTAImQAAIILVYFSDNA---WNLMLSITGVVILPAYIGS-AAFLWKLIA 406
Cdd:PRK10655  298 VFKSSADEGYFPKIFSRVTKVDAPVQGMLIIVVI-QSLLSLMTISPSLnsqFNVLVNLAVVTNIIPYILSmAALVIIQKV 376
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*...
gi 1864680992 407 TGAYPSTAKMgkasALIISLLATGFGLWLVYAAGVQFMLAGAVIYAAG 454
Cdd:PRK10655  377 ANVPPSKAKV----ANFIAFVGALYSFYALYSSGEEAMLYGSIVTFLG 420
AA_permease pfam00324
Amino acid permease;
38-399 1.02e-12

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 70.04  E-value: 1.02e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  38 MFGGGVFNIPQNMAQSAALGAILIAWMISGLGIFFLARSFQVLADIRPEmTSGIYMYARAGFGKLAGFLIAWGYWLSVAF 117
Cdd:pfam00324  10 VIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPV-SGGFYTYASRFLGPSLGFATGWNYWLSWIT 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 118 GnvgyAVLMMDALNYFFPPYFAGGNTWQATLGSSAIIWGLCFLVMRGVKGASLLNNIGTVAKFVPATLFLLVVLYFSFSR 197
Cdd:pfam00324  89 V----LALELTAASILIQFWELVPDIPYLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIILLSGG 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 198 DLFTSDFWGNLTDQARQDKPLGGVVEQIKGTMLVTLWMYIGIESAVVMSNRSD--AKTVSRATLLGYFIVTVLFVLVSV- 274
Cdd:pfam00324 165 NPNDGAIFRYLGDNGGKNNFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKnpEKSIPKAILQVIWRITIFYILSLLa 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 275 --LPFGVMSQGEL-STLAPPSTSAILGSLVGLWG-EVLINVGVIIALLSSWLVWTLLVAELPWACAKDGTFPKMFAKTNV 350
Cdd:pfam00324 245 igLLVPWNDPGLLnDSASAASPFVIFFKFLGISGlAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFLKKVDK 324
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 1864680992 351 AGIASVSLIISTAIMQAAIILVYFS-DNAWNLMLSITGVVILPAYIGSAA 399
Cdd:pfam00324 325 RGVPLRAILVSMVISLLALLLASLNpAIVFNFLLAISGLSGLIVWGLISL 374
frlA PRK11357
amino acid permease;
23-464 5.06e-12

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 67.96  E-value: 5.06e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  23 KKLGLFAMTLLVVSAMFGGGVFNIPQNMAQSAALGAILI-AWMISGLGIFFLARSFQVLADIRPEmTSGIYMYARAGFGK 101
Cdd:PRK11357    8 RKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVlAFVIGGLIVIPQMCVYAELSTAYPE-NGADYVYLKNAGSR 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 102 LAGFLIAWGYWLsvAFGNVGYAVLMMDALNYFfpPYFAGGNTWQATLGSSAIIWGLCFLVMRGVKGASLLNNIGTVAKFV 181
Cdd:PRK11357   87 PLAFLSGWASFW--ANDAPSLSIMALAIVSNL--GFLTPIDPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKII 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 182 PATLFLLVVLYFsFSRDLFTSDFWGNLTDQARQDKPLGGVVeqikgtmlVTLWMYIGIESAVVMSN--RSDAKTVSRATL 259
Cdd:PRK11357  163 PFTIVIGLGIFW-FKAENFAAPTTTAIGATGSFMALLAGIS--------ATSWSYTGMASICYMTGeiKNPGKTMPRALI 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 260 LGYFIVTVLFVLVSVLPFGVMSQGELSTLAPPSTSAI-----LGSLVGLWGEVLINVgVIIALLSSWLVWTllvAELPWA 334
Cdd:PRK11357  234 GSCLLVLVLYTLLALVISGLMPFDKLANSETPISDALtwipaLGSTAGIFVAITAMI-VILGSLSSCVMYQ---PRLEYA 309
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 335 CAKDGTFPKMFAKTNVA-GIASVSLIISTAImqaAIILVYFSDNAwNLMLSITGVVILPAYIGSAAFLWKLIATGAYPST 413
Cdd:PRK11357  310 MAKDNLFFKCFGHVHPKyNTPDVSIILQGAL---GIFFIFVSDLT-SLLGYFTLVMCFKNTLTFGSIIWCRKRDDYKPLW 385
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1864680992 414 AKMGKASALIISLLATGFGLWLVYA-AGVQFMLAGAVIYAAGIPVFY-WARRS 464
Cdd:PRK11357  386 RTPAFGLMTTLAIASSLILVASTFVwAPIPGLICAVIVIATGLPAYAfWAKRS 438
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
58-391 1.78e-06

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 50.50  E-value: 1.78e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  58 AILIAWMISGLGIFFLARSFQVLADIRPEMTSGIYmYARAGFGKLAGFLIAWGYWLSVAFgnvgyaVLMMDA------LN 131
Cdd:COG1113    49 AVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSD-YAREYLGPWAGFVTGWLYWFFWVL------VGMAEAtavgiyLQ 121
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 132 YFFPpyfaggntwqatlGSSAIIWGLCFLVmrgvkgASLLNNIGTVAKF-----------VPATLFLLVV----LYFSFS 196
Cdd:COG1113   122 FWFP-------------DVPQWVWALVFLV------LLTAINLLSVKLFgefefwfalikVVAIVAFIVVglllIFFGFG 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 197 RDLFTSDFWGNLTDQarqdkplGGV----VEQIKGTMLVTLWMYIGIESAVVMSNRSD--AKTVSRAT-----LLGYFIV 265
Cdd:COG1113   183 LPGGPPAGLSNLWDH-------GGFfpngIGGVLAALQIVVFAFGGIELVGIAAAEAKdpEKTIPKAInsviwRILLFYV 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 266 TVLFVLVSVLPFGVMSQGElstlappSTSAILGSLVGL-WGEVLINVGVIIALLSSW---------LVWTLlvaelpwac 335
Cdd:COG1113   256 GSLFVILALVPWNQIGAGG-------SPFVTVFSLLGIpAAAGIMNFVVLTAALSSLnsglystsrMLYSL--------- 319
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1864680992 336 AKDGTFPKMFAKTNVAGIASVSLIISTAIMQAAIILVYFS-DNAWNLMLSITGVVIL 391
Cdd:COG1113   320 AERGDAPKFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLpEKAFTFLLSISGFGAL 376
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
33-365 2.12e-06

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 50.20  E-value: 2.12e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  33 LVVSAMFGGGVFNIPQNMAQSAALGAILIAWMISGLGIFFLARSFQVLAdIRPEMTSGIYMYARAGFGKLAGFLIAWGYW 112
Cdd:TIGR00906  38 LGIGSTIGAGIYVLTGEVARNDSGPAIVLSFLISGLAAVLSGFCYAEFG-ARVPKAGSAYLYSYVTVGELWAFITGWNLI 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 113 LSVAFGNVG--------YAVLMMDALNYFFPPYFAGGNTWQAT---LGSSAIIWGLCFLVMRGVKGASLLNNIgtvakfv 181
Cdd:TIGR00906 117 LEYVIGTAAvarswsayFDELLNKQIGQFRRTYFKLNYDGLAEypdFFAVCLILLLAVLLSFGVKESAWVNKI------- 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 182 pATLFLLVVLYFSFSRDLFTSDF--WGNLTDQARQDKPLGGVVEQIKGTMlVTLWMYIGIESAVVMSN--RSDAKTVSRA 257
Cdd:TIGR00906 190 -FTAINILVLLFVIIAGFTKADVanWSITEEKGAGGFMPYGFTGVLSGAA-TCFFAFIGFDAIATTGEevKNPQRAIPIG 267
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 258 TLLGYFIVTVLFVLVSVLPFGVMSQGELSTLAPPSTSAilgSLVGL-WGEVLINVGVIIALLSSWLVWTLLVAELPWACA 336
Cdd:TIGR00906 268 IVTSLLVCFVAYFLMSAALTLMMPYYLLDPDAPFPVAF---EYVGWdPAKYIVAVGALCGMSTSLLGGMFPLPRVIYAMA 344
                         330       340       350
                  ....*....|....*....|....*....|...
gi 1864680992 337 KDGTFPKMFA----KTNVAGIASVSLIISTAIM 365
Cdd:TIGR00906 345 RDGLLFKWLAqinsKTKTPINATVVSGAIAALM 377
PRK11021 PRK11021
putative transporter; Provisional
25-375 5.98e-06

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 48.37  E-value: 5.98e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  25 LGLFAMTLLvvsamfGGGVFNIPQnMAQSAALGAILIAWMISGLGIFFLARSFQVLADIRPEmTSGIYMYARAGFGKLAG 104
Cdd:PRK11021    7 IGLLSTSLL------GTGVFAVPA-LAALVAGNNSLWAWPLLILLIFPIAIVFARLGRHFPH-AGGPAHFVGMAFGPRLG 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 105 FLIAWGYWLSVAFGnvGYAVLMMDA--LNYFFPpyFAGGNTWQATLGSSAIIWGLcflvmrGVKGASLLNNIgtvaKFVP 182
Cdd:PRK11021   79 RVTGWLFLSVIPVG--LPAALQIAAgfGQALFG--WSSWQLLLAELLTLALLWLL------NLRGASSSANL----QTVI 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 183 ATLFLLVVLYFSFSRDLFTSDF-WGNLTDqarqdkplgGVVEQIKGTMLVTLWMYIGIESAVVMSN--RSDAKTVSRATL 259
Cdd:PRK11021  145 ALLIVALVVAIWWAGDIKPADIpFPAPGS---------IEWSGLFAALGVMFWCFVGIEAFAHLASefKNPERDFPRALM 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 260 LGYFIVTVLFVL--VSVLPFGVMSQGELSTLAPPstsAILGSLVGLWGEVLINVGVIIALLSSWLVWTLLVAELPWACAK 337
Cdd:PRK11021  216 IGLLLAGLVYWActVVVLHFPAYGDKQAAAASLP---GIFVQLFGGYALWVICVIGYLACFASVNIYTQSFARLVWSQAR 292
                         330       340       350
                  ....*....|....*....|....*....|....*...
gi 1864680992 338 DGTFPKMFAKTNVAGIASVSLIISTAIMQAAIILVYFS 375
Cdd:PRK11021  293 EGRPPSYLARLSARGVPVNALNAVLGCCAVSILLIYAL 330
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
50-399 1.39e-05

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 47.47  E-value: 1.39e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  50 MAQSAALGAILiAWMISGLGIFFLARSFQVLADIRPEmTSGIYMYARAGFGKLAGFLIAWGYWLS----VAFGNVGYAVL 125
Cdd:COG0833    40 ISQAGPGGALL-AYLLGGLMVYFLMTSLGELAVAMPV-SGSFQTYATRFIDPAFGFAVGWNYWLNwaitVAAELTAAGII 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 126 MmdalNYFFPpyfaggntwqatlGSSAIIWGLCFLVMrgvkgASLLNNIGTVA-----------KFVPATLFLLVVLYFS 194
Cdd:COG0833   118 M----QYWFP-------------DVPVWIWSLLFLAL-----IFLLNALSVKAfgesefwfsliKVITVIAFIIVGLLMI 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 195 FSRDLFTSDFWGNLTDQarqDKPLGGVVEQIKGTMLVTLWMYIGIESAVVMSNRSD--AKTVSRAT------LLGYFIVT 266
Cdd:COG0833   176 FGIIGGHAPGFSNFTTG---DGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESEnpEKTIPKAIrqvfwrILLFYILA 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 267 VlFVLVSVLPFGVMSQGElstlappSTSAILGSLVGL-WGEVLINVGVIIALLS---SWLVWTllvAELPWACAKDGTFP 342
Cdd:COG0833   253 I-FVIAALIPYTDAGVAE-------SPFTLVFERAGIpYAADIMNAVILTAVLSagnSGLYAS---TRMLWSLAKEGMAP 321
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1864680992 343 KMFAKTNVAGIASVSLIISTAIMQAAIILVYFSDN-AWNLMLSITGVVILPAYIGSAA 399
Cdd:COG0833   322 KIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGtVYLWLLSISGLTGFIAWLGIAI 379
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
23-285 2.10e-04

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 43.97  E-value: 2.10e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992  23 KKLGLFAMTLLVVSAMFGGGVFNIPQNMAQSA-ALGAILIAWMISGLGIFFLARSFQVLADIRPEmTSGIYMYARAGFGK 101
Cdd:TIGR00911  42 KEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAgSVGLALIMWAVCGIFSIVGALVYAELGTTIPK-SGGEYNYILEVFGP 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 102 LAGFLIAWgYWLSVAFGNVGYAVLMMDAlNYFFPPYFAGGNT--WQATLGSSAIIWGLCFLVMRGVKGASLLNNIGTVAK 179
Cdd:TIGR00911 121 LLAFLRLW-IELLVIRPGSQAVNALNFA-IYILTPVFPDCEVpeWAIRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACK 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1864680992 180 fVPATLFLLVVLYFSFSRDLFTSDFWGNLTDQArqDKPLGGVVEqikgTMLVTLWMYIGIE--SAVVMSNRSDAKTVSRA 257
Cdd:TIGR00911 199 -LLALLLIIITGWVQLGKGGVESLNPKNAFEGT--ETSAGGIVL----AFYSGIWAYGGWNylNFVTEEVKNPYRTLPIA 271
                         250       260
                  ....*....|....*....|....*...
gi 1864680992 258 TLLGYFIVTVLFVLVSVLPFGVMSQGEL 285
Cdd:TIGR00911 272 IIISMPIVTFIYVLTNIAYFTVLSPEEL 299
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH