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replication-like protein [Gossypium mustelinum symptomless alphasatellite]
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
Viral_Rep super family | cl03577 | Putative viral replication protein; This is a family of viral ORFs from various plant and ... |
6-94 | 1.35e-18 | |||
Putative viral replication protein; This is a family of viral ORFs from various plant and animal ssDNA circoviruses. Published evidence to support the annotated function "viral replication associated protein" has not be found. The actual alignment was detected with superfamily member pfam02407: Pssm-ID: 280553 Cd Length: 82 Bit Score: 78.38 E-value: 1.35e-18
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RNA_helicase super family | cl46641 | RNA helicase; This family includes RNA helicases thought to be involved in duplex unwinding ... |
181-276 | 7.57e-11 | |||
RNA helicase; This family includes RNA helicases thought to be involved in duplex unwinding during viral RNA replication. Members of this family are found in a variety of single stranded RNA viruses. The actual alignment was detected with superfamily member pfam00910: Pssm-ID: 459992 Cd Length: 102 Bit Score: 58.00 E-value: 7.57e-11
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Name | Accession | Description | Interval | E-value | |||
Viral_Rep | pfam02407 | Putative viral replication protein; This is a family of viral ORFs from various plant and ... |
6-94 | 1.35e-18 | |||
Putative viral replication protein; This is a family of viral ORFs from various plant and animal ssDNA circoviruses. Published evidence to support the annotated function "viral replication associated protein" has not be found. Pssm-ID: 280553 Cd Length: 82 Bit Score: 78.38 E-value: 1.35e-18
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RNA_helicase | pfam00910 | RNA helicase; This family includes RNA helicases thought to be involved in duplex unwinding ... |
181-276 | 7.57e-11 | |||
RNA helicase; This family includes RNA helicases thought to be involved in duplex unwinding during viral RNA replication. Members of this family are found in a variety of single stranded RNA viruses. Pssm-ID: 459992 Cd Length: 102 Bit Score: 58.00 E-value: 7.57e-11
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Name | Accession | Description | Interval | E-value | |||
Viral_Rep | pfam02407 | Putative viral replication protein; This is a family of viral ORFs from various plant and ... |
6-94 | 1.35e-18 | |||
Putative viral replication protein; This is a family of viral ORFs from various plant and animal ssDNA circoviruses. Published evidence to support the annotated function "viral replication associated protein" has not be found. Pssm-ID: 280553 Cd Length: 82 Bit Score: 78.38 E-value: 1.35e-18
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RNA_helicase | pfam00910 | RNA helicase; This family includes RNA helicases thought to be involved in duplex unwinding ... |
181-276 | 7.57e-11 | |||
RNA helicase; This family includes RNA helicases thought to be involved in duplex unwinding during viral RNA replication. Members of this family are found in a variety of single stranded RNA viruses. Pssm-ID: 459992 Cd Length: 102 Bit Score: 58.00 E-value: 7.57e-11
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Blast search parameters | ||||
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