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Conserved domains on  [gi|185134993|ref|NP_001117675|]
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branched-chain alpha-keto acid lipoamide acyltransferase [Oncorhynchus mykiss]

Protein Classification

lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex( domain architecture ID 1003376)

lipoamide acyltransferase component (E2) of branched-chain alpha-keto acid dehydrogenase complex that catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PLN02528 super family cl33511
2-oxoisovalerate dehydrogenase E2 component
66-495 1.58e-170

2-oxoisovalerate dehydrogenase E2 component


The actual alignment was detected with superfamily member PLN02528:

Pssm-ID: 215289 [Multi-domain]  Cd Length: 416  Bit Score: 486.92  E-value: 1.58e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  66 FKLSDIGEGIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDIETEPGPEV 145
Cdd:PLN02528   1 VPLAQTGEGIAECELLRWFVKEGDQVEEFQPLCEVQSDKATIEITSRYKGKVAQINFSPGDIVKVGETLLKIMVEDSQHL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 146 VHEEDVVETPAMSNDEHTHQEIKGHKT---QATPAVRRLAMENNIKLSEVVGTGRDGRILKEDILNFLAkQTGAILPPTP 222
Cdd:PLN02528  81 RSDSLLLPTDSSNIVSLAESDERGSNLsgvLSTPAVRHLAKQYGIDLNDILGTGKDGRVLKEDVLKYAA-QKGVVKDSSS 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 223 FHEiqppppaASAPSSASMPKMKPTPSVQLpvvsrpvftGKDSTEPLKGFHKAMVKTMTAALKIPHFGYKDEVDLTRLVQ 302
Cdd:PLN02528 160 AEE-------ATIAEQEEFSTSVSTPTEQS---------YEDKTIPLRGFQRAMVKTMTAAAKVPHFHYVEEINVDALVE 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 303 LRKELKGLSEARGVKLSYMPFFIKAASLGLLHFPILNASVDEAVQNITYKASHNIGLAMDTSQGLLVPNVKNVQLLSVFE 382
Cdd:PLN02528 224 LKASFQENNTDPTVKHTFLPFLIKSLSMALSKYPLLNSCFNEETSEIRLKGSHNIGVAMATEHGLVVPNIKNVQSLSLLE 303
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 383 IAVELNRMQTLGATGQLGTADLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGKIQVLPRFNSRDEVVKAHVMNVSWS 462
Cdd:PLN02528 304 ITKELSRLQHLAAENKLNPEDITGGTITLSNIGAIGGKFGSPVLNLPEVAIIALGRIQKVPRFVDDGNVYPASIMTVTIG 383
                        410       420       430
                 ....*....|....*....|....*....|...
gi 185134993 463 ADHRIIDGATMARFSNLWRDYLENPASMVLDLK 495
Cdd:PLN02528 384 ADHRVLDGATVARFCNEWKSYVEKPELLMLHMR 416
 
Name Accession Description Interval E-value
PLN02528 PLN02528
2-oxoisovalerate dehydrogenase E2 component
66-495 1.58e-170

2-oxoisovalerate dehydrogenase E2 component


Pssm-ID: 215289 [Multi-domain]  Cd Length: 416  Bit Score: 486.92  E-value: 1.58e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  66 FKLSDIGEGIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDIETEPGPEV 145
Cdd:PLN02528   1 VPLAQTGEGIAECELLRWFVKEGDQVEEFQPLCEVQSDKATIEITSRYKGKVAQINFSPGDIVKVGETLLKIMVEDSQHL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 146 VHEEDVVETPAMSNDEHTHQEIKGHKT---QATPAVRRLAMENNIKLSEVVGTGRDGRILKEDILNFLAkQTGAILPPTP 222
Cdd:PLN02528  81 RSDSLLLPTDSSNIVSLAESDERGSNLsgvLSTPAVRHLAKQYGIDLNDILGTGKDGRVLKEDVLKYAA-QKGVVKDSSS 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 223 FHEiqppppaASAPSSASMPKMKPTPSVQLpvvsrpvftGKDSTEPLKGFHKAMVKTMTAALKIPHFGYKDEVDLTRLVQ 302
Cdd:PLN02528 160 AEE-------ATIAEQEEFSTSVSTPTEQS---------YEDKTIPLRGFQRAMVKTMTAAAKVPHFHYVEEINVDALVE 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 303 LRKELKGLSEARGVKLSYMPFFIKAASLGLLHFPILNASVDEAVQNITYKASHNIGLAMDTSQGLLVPNVKNVQLLSVFE 382
Cdd:PLN02528 224 LKASFQENNTDPTVKHTFLPFLIKSLSMALSKYPLLNSCFNEETSEIRLKGSHNIGVAMATEHGLVVPNIKNVQSLSLLE 303
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 383 IAVELNRMQTLGATGQLGTADLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGKIQVLPRFNSRDEVVKAHVMNVSWS 462
Cdd:PLN02528 304 ITKELSRLQHLAAENKLNPEDITGGTITLSNIGAIGGKFGSPVLNLPEVAIIALGRIQKVPRFVDDGNVYPASIMTVTIG 383
                        410       420       430
                 ....*....|....*....|....*....|...
gi 185134993 463 ADHRIIDGATMARFSNLWRDYLENPASMVLDLK 495
Cdd:PLN02528 384 ADHRVLDGATVARFCNEWKSYVEKPELLMLHMR 416
2-oxoacid_dh pfam00198
2-oxoacid dehydrogenases acyltransferase (catalytic domain); These proteins contain one to ...
280-490 2.16e-93

2-oxoacid dehydrogenases acyltransferase (catalytic domain); These proteins contain one to three copies of a lipoyl binding domain followed by the catalytic domain.


Pssm-ID: 425518 [Multi-domain]  Cd Length: 212  Bit Score: 282.51  E-value: 2.16e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  280 MTAAL-KIPHFGYKDEVDLTRLVQLRKELKGLSEARGVKLSYMPFFIKAASLGLLHFPILNASVDEAVQNITYKASHNIG 358
Cdd:pfam00198   1 MTESKqTIPHFTLTDEVDVTELLALREELKEDAADEETKLTFLPFLVKAVALALKKFPELNASWDGEEGEIVYKKYVNIG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  359 LAMDTSQGLLVPNVKNVQLLSVFEIAVELNRMQTLGATGQLGTADLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGK 438
Cdd:pfam00198  81 IAVATPRGLIVPVIRNADRKSILEIAKEIKDLAERAREGKLKPEDLQGGTFTISNLGMFGVTFFTPIINPPQVAILGVGR 160
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 185134993  439 IQVLPRFNsRDEVVKAHVMNVSWSADHRIIDGATMARFSNLWRDYLENPASM 490
Cdd:pfam00198 161 IRKRPVVV-DGEIVVRKVMPLSLSFDHRVIDGAEAARFLNTLKELLENPELL 211
sucB TIGR01347
2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); This ...
67-494 2.65e-71

2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); This model describes the TCA cycle 2-oxoglutarate system E2 component, dihydrolipoamide succinyltransferase. It is closely related to the pyruvate dehydrogenase E2 component, dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase. [Energy metabolism, TCA cycle]


Pssm-ID: 273565 [Multi-domain]  Cd Length: 403  Bit Score: 232.32  E-value: 2.65e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993   67 KLSDIGEGIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDIE--TEPGPE 144
Cdd:TIGR01347   4 KVPELAESITEGTVAEWHKKVGDTVKRDENIVEIETDKVVLEVPSPADGVLQEILFKEGDTVESGQVLAILEegNDATAA 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  145 VVHEEDVVETPAMSNDEHTHQEIKGHKTQATPAVRRLAMENNIKLSEVVGTGRDGRILKEDILNFLAKQTGAiLPPTPFH 224
Cdd:TIGR01347  84 PPAKSGEEKEETPAASAAAAPTAAANRPSLSPAARRLAKEHGIDLSAVPGTGVTGRVTKEDIIKKTEAPASA-QPPAAAA 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  225 EIQPPPPAASAPSSASMPKMKPTpsvqlpvVSRPVFTGKDSTEPLKGFHkamvktmtaalkiphfgykdEVDLTRLVQLR 304
Cdd:TIGR01347 163 AAAAPAAATRPEERVKMTRLRQR-------IAERLKEAQNSTAMLTTFN--------------------EVDMSAVMELR 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  305 KELKGLSEAR-GVKLSYMPFFIKAASLGLLHFPILNASVDEavQNITYKASHNIGLAMDTSQGLLVPNVKNVQLLSVFEI 383
Cdd:TIGR01347 216 KRYKEEFEKKhGVKLGFMSFFVKAVVAALKRFPEVNAEIDG--DDIVYKDYYDISVAVSTDRGLVVPVVRNADRMSFADI 293
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  384 AVELNRMQTLGATGQLGTADLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGKIQVLPrFNSRDEVVKAHVMNVSWSA 463
Cdd:TIGR01347 294 EKEIADLGKKARDGKLTLEDMTGGTFTITNGGVFGSLMSTPIINPPQSAILGMHGIKERP-VAVNGQIEIRPMMYLALSY 372
                         410       420       430
                  ....*....|....*....|....*....|.
gi 185134993  464 DHRIIDGATMARFSNLWRDYLENPASMVLDL 494
Cdd:TIGR01347 373 DHRLIDGKEAVTFLVTIKELLEDPRRLLLDL 403
lipoyl_domain cd06849
Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. ...
65-137 2.48e-26

Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid dehydrogenase multienzyme complexes, like pyruvate dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH) and branched-chain 2-oxo acid dehydrogenase (BCDH), contain at least three different enzymes, 2-oxo acid dehydrogenase (E1), dihydrolipoyl acyltransferase (E2) and dihydrolipoamide dehydrogenase (E3) and play a key role in redox regulation. E2, the central component of the complex, catalyzes the transfer of the acyl group of CoA from E1 to E3 via reductive acetylation of a lipoyl group covalently attached to a lysine residue.


Pssm-ID: 133458 [Multi-domain]  Cd Length: 74  Bit Score: 101.71  E-value: 2.48e-26
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 185134993  65 PFKLSDIGEGIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDI 137
Cdd:cd06849    2 EIKMPDLGESMTEGTIVEWLVKEGDSVEEGDVLAEVETDKATVEVEAPAAGVLAKILVEEGDTVPVGQVIAVI 74
AceF COG0508
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component ...
66-137 3.41e-22

Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component [Energy production and conversion]; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component is part of the Pathway/BioSystem: Pyruvate oxidation


Pssm-ID: 440274 [Multi-domain]  Cd Length: 77  Bit Score: 90.13  E-value: 3.41e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 185134993  66 FKLSDIGEGIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDI 137
Cdd:COG0508    5 IKMPDLGESMTEGTIVEWLVKEGDTVKEGDPLAEVETDKATMEVPAPAAGVLLEILVKEGDTVPVGAVIAVI 76
 
Name Accession Description Interval E-value
PLN02528 PLN02528
2-oxoisovalerate dehydrogenase E2 component
66-495 1.58e-170

2-oxoisovalerate dehydrogenase E2 component


Pssm-ID: 215289 [Multi-domain]  Cd Length: 416  Bit Score: 486.92  E-value: 1.58e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  66 FKLSDIGEGIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDIETEPGPEV 145
Cdd:PLN02528   1 VPLAQTGEGIAECELLRWFVKEGDQVEEFQPLCEVQSDKATIEITSRYKGKVAQINFSPGDIVKVGETLLKIMVEDSQHL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 146 VHEEDVVETPAMSNDEHTHQEIKGHKT---QATPAVRRLAMENNIKLSEVVGTGRDGRILKEDILNFLAkQTGAILPPTP 222
Cdd:PLN02528  81 RSDSLLLPTDSSNIVSLAESDERGSNLsgvLSTPAVRHLAKQYGIDLNDILGTGKDGRVLKEDVLKYAA-QKGVVKDSSS 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 223 FHEiqppppaASAPSSASMPKMKPTPSVQLpvvsrpvftGKDSTEPLKGFHKAMVKTMTAALKIPHFGYKDEVDLTRLVQ 302
Cdd:PLN02528 160 AEE-------ATIAEQEEFSTSVSTPTEQS---------YEDKTIPLRGFQRAMVKTMTAAAKVPHFHYVEEINVDALVE 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 303 LRKELKGLSEARGVKLSYMPFFIKAASLGLLHFPILNASVDEAVQNITYKASHNIGLAMDTSQGLLVPNVKNVQLLSVFE 382
Cdd:PLN02528 224 LKASFQENNTDPTVKHTFLPFLIKSLSMALSKYPLLNSCFNEETSEIRLKGSHNIGVAMATEHGLVVPNIKNVQSLSLLE 303
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 383 IAVELNRMQTLGATGQLGTADLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGKIQVLPRFNSRDEVVKAHVMNVSWS 462
Cdd:PLN02528 304 ITKELSRLQHLAAENKLNPEDITGGTITLSNIGAIGGKFGSPVLNLPEVAIIALGRIQKVPRFVDDGNVYPASIMTVTIG 383
                        410       420       430
                 ....*....|....*....|....*....|...
gi 185134993 463 ADHRIIDGATMARFSNLWRDYLENPASMVLDLK 495
Cdd:PLN02528 384 ADHRVLDGATVARFCNEWKSYVEKPELLMLHMR 416
PRK11855 PRK11855
dihydrolipoamide acetyltransferase; Reviewed
60-492 1.05e-149

dihydrolipoamide acetyltransferase; Reviewed


Pssm-ID: 237000 [Multi-domain]  Cd Length: 547  Bit Score: 438.49  E-value: 1.05e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  60 SGPILPFKLSDIGEgIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDIET 139
Cdd:PRK11855 116 GGGVVEVKVPDIGE-ITEVEVIEWLVKVGDTVEEDQSLITVETDKATMEIPSPVAGVVKEIKVKVGDKVSVGSLLVVIEV 194
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 140 EPGPEVVHEEDVVETPA-------------MSNDEHT--HQEIKGHKTQ-ATPAVRRLAMENNIKLSEVVGTGRDGRILK 203
Cdd:PRK11855 195 AAAAPAAAAAPAAAAPAaaaaaapapapaaAAAPAAAapAAAAAPGKAPhASPAVRRLARELGVDLSQVKGTGKKGRITK 274
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 204 EDILNFL-AKQTGAILPPTPfheiqppppaasapssasmPKMKPTPSVQLPVVSRPVFT--GKDSTEPLKGFHKAMVKTM 280
Cdd:PRK11855 275 EDVQAFVkGAMSAAAAAAAA-------------------AAAAGGGGLGLLPWPKVDFSkfGEIETKPLSRIKKISAANL 335
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 281 TAAL-KIPHFGYKDEVDLTRLVQLRKELKGLSEARGVKLSYMPFFIKAASLGLLHFPILNASVDEAVQNITYKASHNIGL 359
Cdd:PRK11855 336 HRSWvTIPHVTQFDEADITDLEALRKQLKKEAEKAGVKLTMLPFFIKAVVAALKEFPVFNASLDEDGDELTYKKYFNIGF 415
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 360 AMDTSQGLLVPNVKNVQLLSVFEIAVELNRMQTLGATGQLGTADLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGKI 439
Cdd:PRK11855 416 AVDTPNGLVVPVIKDVDKKSLLEIAREIAELAKKARDGKLKPDDMQGGCFTISSLGGIGGTAFTPIINAPEVAILGVGKS 495
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|...
gi 185134993 440 QVLPrFNSRDEVVKAHVMNVSWSADHRIIDGATMARFSNLWRDYLENPASMVL 492
Cdd:PRK11855 496 QMKP-VWDGKEFVPRLMLPLSLSYDHRVIDGATAARFTNYLKQLLADPRRMLL 547
PRK11856 PRK11856
branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
66-493 8.46e-123

branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed


Pssm-ID: 237001 [Multi-domain]  Cd Length: 411  Bit Score: 364.88  E-value: 8.46e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  66 FKLSDIGEGIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDIETE----- 140
Cdd:PRK11856   5 FKMPDLGEGMTEGEIVEWLVKVGDTVKEGQPLAEVETDKATVEIPSPVAGTVAKLLVEEGDVVPVGSVIAVIEEEgeaea 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 141 ---------PGPEVVHEEDVVETPAMSNDEHTHQEIKGHKTQATPAVRRLAMENNIKLSEVVGTGRDGRILKEDILNFLA 211
Cdd:PRK11856  85 aaaaeaapeAPAPEPAPAAAAAAAAAPAAAAAPAAPAAAAAKASPAVRKLARELGVDLSTVKGSGPGGRITKEDVEAAAA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 212 KQTGAilpptpfheiqppppaasapssasmpkmkPTPSVQLPVVSRPVFTGKDSTEPLKGFHKAMVKTMTAA-LKIPHFG 290
Cdd:PRK11856 165 AAAPA-----------------------------AAAAAAAAAAPPAAAAEGEERVPLSGMRKAIAKRMVESkREIPHFT 215
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 291 YKDEVDLTRLVQLRKELKglseARGVKLSYMPFFIKAASLGLLHFPILNASVDEavQNITYKASHNIGLAMDTSQGLLVP 370
Cdd:PRK11856 216 LTDEVDVTALLALRKQLK----AIGVKLTVTDFLIKAVALALKKFPELNASWDD--DAIVLKKYVNIGIAVATDGGLIVP 289
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 371 NVKNVQLLSVFEIAVELNRMQTLGATGQLGTADLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGKIQVLPRFNsRDE 450
Cdd:PRK11856 290 VIRDADKKSLFELAREIKDLAEKAREGKLKPEELQGGTFTISNLGMFGGDYFTPIINPPEVAILGVGAIVERPVVV-DGE 368
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|...
gi 185134993 451 VVKAHVMNVSWSADHRIIDGATMARFSNLWRDYLENPASMVLD 493
Cdd:PRK11856 369 IVVRKVMPLSLSFDHRVIDGADAARFLKALKELLENPALLLLE 411
2-oxoacid_dh pfam00198
2-oxoacid dehydrogenases acyltransferase (catalytic domain); These proteins contain one to ...
280-490 2.16e-93

2-oxoacid dehydrogenases acyltransferase (catalytic domain); These proteins contain one to three copies of a lipoyl binding domain followed by the catalytic domain.


Pssm-ID: 425518 [Multi-domain]  Cd Length: 212  Bit Score: 282.51  E-value: 2.16e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  280 MTAAL-KIPHFGYKDEVDLTRLVQLRKELKGLSEARGVKLSYMPFFIKAASLGLLHFPILNASVDEAVQNITYKASHNIG 358
Cdd:pfam00198   1 MTESKqTIPHFTLTDEVDVTELLALREELKEDAADEETKLTFLPFLVKAVALALKKFPELNASWDGEEGEIVYKKYVNIG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  359 LAMDTSQGLLVPNVKNVQLLSVFEIAVELNRMQTLGATGQLGTADLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGK 438
Cdd:pfam00198  81 IAVATPRGLIVPVIRNADRKSILEIAKEIKDLAERAREGKLKPEDLQGGTFTISNLGMFGVTFFTPIINPPQVAILGVGR 160
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 185134993  439 IQVLPRFNsRDEVVKAHVMNVSWSADHRIIDGATMARFSNLWRDYLENPASM 490
Cdd:pfam00198 161 IRKRPVVV-DGEIVVRKVMPLSLSFDHRVIDGAEAARFLNTLKELLENPELL 211
aceF PRK11854
pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated
70-492 3.21e-82

pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated


Pssm-ID: 236999 [Multi-domain]  Cd Length: 633  Bit Score: 267.25  E-value: 3.21e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  70 DIGEGimEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDIETE--------- 140
Cdd:PRK11854 213 DIGGD--EVEVTEVMVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEIKVNVGDKVKTGSLIMRFEVEgaapaaapa 290
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 141 ------PGPEVVHEEDVVETPAMSNDEHTHQEIKGHKTQATPAVRRLAMENNIKLSEVVGTGRDGRILKEDILNFL---- 210
Cdd:PRK11854 291 kqeaaaPAPAAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLVRRLAREFGVNLAKVKGTGRKGRILKEDVQAYVkdav 370
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 211 -AKQTGAILPPTPfheiqppppaasapssASMPKMKPTPSVQlpvvsrPVFTGKDSTEPLKGFHKAMVKTMTAAL-KIPH 288
Cdd:PRK11854 371 kRAEAAPAAAAAG----------------GGGPGLLPWPKVD------FSKFGEIEEVELGRIQKISGANLHRNWvMIPH 428
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 289 FGYKDEVDLTRLVQLRKELKGLSEAR--GVKLSYMPFFIKAASLGLLHFPILNASVDEAVQNITYKASHNIGLAMDTSQG 366
Cdd:PRK11854 429 VTQFDKADITELEAFRKQQNAEAEKRklGVKITPLVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYVNIGIAVDTPNG 508
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 367 LLVPNVKNVQLLSVFEIAVELNRMQTLGATGQLGTADLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGKIQVLPRFN 446
Cdd:PRK11854 509 LVVPVFKDVNKKGIIELSRELMDISKKARDGKLTAGDMQGGCFTISSIGGLGTTHFTPIVNAPEVAILGVSKSAMEPVWN 588
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*.
gi 185134993 447 SrDEVVKAHVMNVSWSADHRIIDGATMARFSNLWRDYLENPASMVL 492
Cdd:PRK11854 589 G-KEFAPRLMLPLSLSYDHRVIDGADGARFITIINDRLSDIRRLVL 633
sucB TIGR01347
2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); This ...
67-494 2.65e-71

2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); This model describes the TCA cycle 2-oxoglutarate system E2 component, dihydrolipoamide succinyltransferase. It is closely related to the pyruvate dehydrogenase E2 component, dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase. [Energy metabolism, TCA cycle]


Pssm-ID: 273565 [Multi-domain]  Cd Length: 403  Bit Score: 232.32  E-value: 2.65e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993   67 KLSDIGEGIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDIE--TEPGPE 144
Cdd:TIGR01347   4 KVPELAESITEGTVAEWHKKVGDTVKRDENIVEIETDKVVLEVPSPADGVLQEILFKEGDTVESGQVLAILEegNDATAA 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  145 VVHEEDVVETPAMSNDEHTHQEIKGHKTQATPAVRRLAMENNIKLSEVVGTGRDGRILKEDILNFLAKQTGAiLPPTPFH 224
Cdd:TIGR01347  84 PPAKSGEEKEETPAASAAAAPTAAANRPSLSPAARRLAKEHGIDLSAVPGTGVTGRVTKEDIIKKTEAPASA-QPPAAAA 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  225 EIQPPPPAASAPSSASMPKMKPTpsvqlpvVSRPVFTGKDSTEPLKGFHkamvktmtaalkiphfgykdEVDLTRLVQLR 304
Cdd:TIGR01347 163 AAAAPAAATRPEERVKMTRLRQR-------IAERLKEAQNSTAMLTTFN--------------------EVDMSAVMELR 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  305 KELKGLSEAR-GVKLSYMPFFIKAASLGLLHFPILNASVDEavQNITYKASHNIGLAMDTSQGLLVPNVKNVQLLSVFEI 383
Cdd:TIGR01347 216 KRYKEEFEKKhGVKLGFMSFFVKAVVAALKRFPEVNAEIDG--DDIVYKDYYDISVAVSTDRGLVVPVVRNADRMSFADI 293
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  384 AVELNRMQTLGATGQLGTADLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGKIQVLPrFNSRDEVVKAHVMNVSWSA 463
Cdd:TIGR01347 294 EKEIADLGKKARDGKLTLEDMTGGTFTITNGGVFGSLMSTPIINPPQSAILGMHGIKERP-VAVNGQIEIRPMMYLALSY 372
                         410       420       430
                  ....*....|....*....|....*....|.
gi 185134993  464 DHRIIDGATMARFSNLWRDYLENPASMVLDL 494
Cdd:TIGR01347 373 DHRLIDGKEAVTFLVTIKELLEDPRRLLLDL 403
PDHac_trf_long TIGR01348
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; This model ...
60-492 6.15e-69

pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; This model describes a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and per cent identity (UPGMA) trees. Members of this set include two or three copies of the lipoyl-binding domain. E. coli AceF is a member of this model, while mitochondrial and some other bacterial forms belong to a separate model. [Energy metabolism, Pyruvate dehydrogenase]


Pssm-ID: 273566 [Multi-domain]  Cd Length: 546  Bit Score: 230.15  E-value: 6.15e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993   60 SGPILPFKLSDIGeGIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVG-------- 131
Cdd:TIGR01348 113 SSGVQEVTVPDIG-DIEKVTVIEVLVKVGDTVSADQSLITLESDKASMEVPAPASGVVKSVKVKVGDSVPTGdliltlsv 191
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  132 ---TPLVDIETEPGPEVVHEEDVVETPAMSNDEHTHQEIK---GHKTQ-------ATPAVRRLAMENNIKLSEVVGTGRD 198
Cdd:TIGR01348 192 agsTPATAPAPASAQPAAQSPAATQPEPAAAPAAAKAQAPapqQAGTQnpakvdhAAPAVRRLAREFGVDLSAVKGTGIK 271
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  199 GRILKEDILNFLAKQTGailpptpfheiqpPPPAASAPSSASMPKMKPTPSVQlpvvsrpvFT--GKDSTEPLKGFHKAM 276
Cdd:TIGR01348 272 GRILREDVQRFVKEPSV-------------RAQAAAASAAGGAPGALPWPNVD--------FSkfGEVEEVDMSRIRKIS 330
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  277 VKTMTAA-LKIPHFGYKDEVDLTRLVQLRKELKGLSEARGVKLSYMPFFIKAASLGLLHFPILNASVDEAVQNITYKASH 355
Cdd:TIGR01348 331 GANLTRNwTMIPHVTHFDKADITEMEAFRKQQNAAVEKEGVKLTVLHILMKAVAAALKKFPKFNASLDLGGEQLILKKYV 410
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  356 NIGLAMDTSQGLLVPNVKNVQLLSVFEIAVELNRMQTLGATGQLGTADLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGA 435
Cdd:TIGR01348 411 NIGVAVDTPNGLLVPVIKDVDRKGITELALELSDLAKKARDGKLTPDEMQGACFTISSLGGIGGTAFTPIVNAPEVAILG 490
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 185134993  436 LGKIQVLPRFNSRdEVVKAHVMNVSWSADHRIIDGATMARFSNLWRDYLENPASMVL 492
Cdd:TIGR01348 491 VSKSGMEPVWNGK-EFEPRLMLPLSLSYDHRVIDGADAARFTTYICESLADIRRLLL 546
PRK05704 PRK05704
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;
67-494 1.35e-66

2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;


Pssm-ID: 235571 [Multi-domain]  Cd Length: 407  Bit Score: 219.71  E-value: 1.35e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  67 KLSDIGEGIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDIET--EPGPE 144
Cdd:PRK05704   6 KVPTLPESVTEATIATWHKKPGDAVKRDEVLVEIETDKVVLEVPAPAAGVLSEILAEEGDTVTVGQVLGRIDEgaAAGAA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 145 VVHEEDVVETPAMSNDEHTHQEIKGHKTQATPAVRRLAMENNIKLSEVVGTGRDGRILKEDILNFLAKQTGAILPPTPfh 224
Cdd:PRK05704  86 AAAAAAAAAAAAAPAQAQAAAAAEQSNDALSPAARKLAAENGLDASAVKGTGKGGRVTKEDVLAALAAAAAAPAAPAA-- 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 225 eiqppppaasapssaSMPKMKPTPSVQLPV-----------VSRPVFTGKDSTeplkgfhkAMVKTmtaalkiphFgykD 293
Cdd:PRK05704 164 ---------------AAPAAAPAPLGARPEervpmtrlrktIAERLLEAQNTT--------AMLTT---------F---N 208
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 294 EVDLTRLVQLRKELKGLSEAR-GVKLSYMPFFIKAASLGLLHFPILNASVDEavQNITYKASHNIGLAMDTSQGLLVPNV 372
Cdd:PRK05704 209 EVDMTPVMDLRKQYKDAFEKKhGVKLGFMSFFVKAVVEALKRYPEVNASIDG--DDIVYHNYYDIGIAVGTPRGLVVPVL 286
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 373 KNVQLLSVFEIAVELNRMQTLGATGQLGTADLTGGTFTLSNigsiGGTY----AKPVILPPEVAIgaLG--KIQVLP-RF 445
Cdd:PRK05704 287 RDADQLSFAEIEKKIAELAKKARDGKLSIEELTGGTFTITN----GGVFgslmSTPIINPPQSAI--LGmhKIKERPvAV 360
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*....
gi 185134993 446 NsrDEVVKAHVMNVSWSADHRIIDGATMARFSNLWRDYLENPASMVLDL 494
Cdd:PRK05704 361 N--GQIVIRPMMYLALSYDHRIIDGKEAVGFLVTIKELLEDPERLLLDL 407
PRK11857 PRK11857
dihydrolipoamide acetyltransferase; Reviewed
171-487 1.61e-64

dihydrolipoamide acetyltransferase; Reviewed


Pssm-ID: 237002 [Multi-domain]  Cd Length: 306  Bit Score: 211.19  E-value: 1.61e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 171 KTQATPAVRRLAMENNIKLSEVVGTGRDGRILKEDILNFLAKQTGAILPPTPfheiqppppaasapssASMPKMKPTPSV 250
Cdd:PRK11857   1 KILATPIARALAKKLGIDISLLKGSGRDGKILAEDVENFIKSLKSAPTPAEA----------------ASVSSAQQAAKT 64
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 251 QLPVVSRPVFTGKdsTEPLKGFHKAMVKTMTAALK-IPHFGYKDEVDLTRLVQLRKELK-GLSEARGVKLSYMPFFIKAA 328
Cdd:PRK11857  65 AAPAAAPPKLEGK--REKVAPIRKAIARAMTNSWSnVAYVNLVNEIDMTKLWDLRKSVKdPVLKTEGVKLTFLPFIAKAI 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 329 SLGLLHFPILNASVDEAVQNITYKASHNIGLAMDTSQGLLVPNVKNVQLLSVFEIAVELNRMQTLGATGQLGTADLTGGT 408
Cdd:PRK11857 143 LIALKEFPIFAAKYDEATSELVYPDTLNLGIAVDTEAGLMVPVIKNAQKLSIVEIAKEISRLAKAARERKIKPDEMKGGS 222
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 185134993 409 FTLSNIGSIGGTYAKPVILPPEVAIGALGKIQVLPRFnSRDEVVKAHVMNVSWSADHRIIDGATMARFSNLWRDYLENP 487
Cdd:PRK11857 223 FTITNYGSVGSLYGVPVINYPELAIAGVGAIIDKAIV-KNGQIVAGKVMHLTVAADHRWIDGATIGRFASRVKELLEKP 300
SucB_Actino TIGR02927
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; This model ...
60-485 3.01e-61

2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817).


Pssm-ID: 200219 [Multi-domain]  Cd Length: 579  Bit Score: 210.25  E-value: 3.01e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993   60 SGPILPFKLSDIGEGIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDI-- 137
Cdd:TIGR02927 123 SGEATEVKMPELGESVTEGTVTSWLKAVGDTVEVDEPLLEVSTDKVDTEIPSPVAGTLLEIRAPEDDTVEVGTVLAIIgd 202
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  138 -------ETEPGPEVVHEEDVVETPAMSNDEHTHQEIKGHKTQA----------------------TPAVRRLAMENNIK 188
Cdd:TIGR02927 203 anaapaePAEEEAPAPSEAGSEPAPDPAARAPHAAPDPPAPAPApaktaapaaaapvssgdsgpyvTPLVRKLAKDKGVD 282
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  189 LSEVVGTGRDGRILKEDILNFLAKQTGAILPPTpfheiqppppaasaPSSASMPKMKPTPSVQLPVVSRPVFTGkdSTEP 268
Cdd:TIGR02927 283 LSTVKGTGVGGRIRKQDVLAAAKAAEEARAAAA--------------APAAAAAPAAPAAAAKPAEPDTAKLRG--TTQK 346
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  269 LKGFHKAMVKTMTAALKI-PHFGYKDEVDLTRLVQLRKELKG-LSEARGVKLSYMPFFIKAASLGLLHFPILNASVDEAV 346
Cdd:TIGR02927 347 MNRIRQITADKTIESLQTsAQLTQVHEVDMTRVAALRARAKNdFLEKNGVNLTFLPFFVQAVTEALKAHPNVNASYNAET 426
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  347 QNITYKASHNIGLAMDTSQGLLVPNVKNVQLLSVFEIAVELNRMQTLGATGQLGTADLTGGTFTLSNIGSIGGTYAKPVI 426
Cdd:TIGR02927 427 KEVTYHDVEHVGIAVDTPRGLLVPVIHNAGDLSLPGLAKAINDLAARARDNKLKPDELSGGTFTITNIGSGGALFDTPIL 506
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 185134993  427 LPPEVAIGALGKIQVLPRF----NSRDEVVKAHVMNVSWSADHRIIDGATMARFSNLWRDYLE 485
Cdd:TIGR02927 507 NPPQAAILGTGAIVKRPRVikdeDGGESIAIRSVCYLPLTYDHRLVDGADAGRFLTTIKKRLE 569
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
49-494 3.09e-58

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 198.37  E-value: 3.09e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  49 SSRFFHTSYvTSGPILPFKLSDIGEGIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATA 128
Cdd:PTZ00144  31 PACSAHFSK-SYFSIKVIKVPTMGDSISEGTVVEWKKKVGDYVKEDEVICIIETDKVSVDIRAPASGVITKIFAEEGDTV 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 129 LVGTPLVDIETEPGPEVVHEEDVVETPAMSNDEH-------THQEIKGHKTQATPAVRrlamenniklsevvgtgrdgri 201
Cdd:PTZ00144 110 EVGAPLSEIDTGGAPPAAAPAAAAAAKAEKTTPEkpkaaapTPEPPAASKPTPPAAAK---------------------- 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 202 lkedilnflaKQTGAILPPTPFHEIQPPPPAASAPSsasMPKMKptpsvqlpvvsrpvftgKDSTEPLKGFHK--AMVKT 279
Cdd:PTZ00144 168 ----------PPEPAPAAKPPPTPVARADPRETRVP---MSRMR-----------------QRIAERLKASQNtcAMLTT 217
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 280 MTaalkiphfgykdEVDLTRLVQLRKELK-GLSEARGVKLSYMPFFIKAASLGLLHFPILNASVDEavQNITYKASHNIG 358
Cdd:PTZ00144 218 FN------------ECDMSALMELRKEYKdDFQKKHGVKLGFMSAFVKASTIALKKMPIVNAYIDG--DEIVYRNYVDIS 283
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 359 LAMDTSQGLLVPNVKNVQLLSVFEIAVELNRMQTLGATGQLGTADLTGGTFTLSNIGSIGGTYAKPVILPPEVAIgaLGK 438
Cdd:PTZ00144 284 VAVATPTGLVVPVIRNCENKSFAEIEKELADLAEKARNNKLTLEDMTGGTFTISNGGVFGSLMGTPIINPPQSAI--LGM 361
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 185134993 439 IQVLPRFNSR-DEVVKAHVMNVSWSADHRIIDGATMARFSNLWRDYLENPASMVLDL 494
Cdd:PTZ00144 362 HAIKKRPVVVgNEIVIRPIMYLALTYDHRLIDGRDAVTFLKKIKDLIEDPARMLLDL 418
PDHac_trf_mito TIGR01349
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; This model ...
76-492 4.60e-56

pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; This model represents one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria. Sequences from Gram-positive bacteria are not included. The non-enzymatic homolog protein X, which serves as an E3 component binding protein, falls within the clade phylogenetically but is rejected by its low score. [Energy metabolism, Pyruvate dehydrogenase]


Pssm-ID: 273567 [Multi-domain]  Cd Length: 436  Bit Score: 193.09  E-value: 4.60e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993   76 MEV-TVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATAL-VGTPLV-------DIET------- 139
Cdd:TIGR01349  11 MTTgNLAKWLKKEGDKVNPGDVIAEIETDKATMEFEAVEEGYLAKILVPEGTKDVpVNKPIAvlveekeDVADafknykl 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  140 -----------------EPGPEVVHEEDVVETPAMSNDEHTHQEIKGHKTQATPAVRRLAMENNIKLSEVVGTGRDGRIL 202
Cdd:TIGR01349  91 essaspapkpseiaptaPPSAPKPSPAPQKQSPEPSSPAPLSDKESGDRIFASPLAKKLAKEKGIDLSAVAGSGPNGRIV 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  203 KEDILNFLAKQtgailpPTPFHEIQPPPPaasapssasmPKMKPTPSvqlpvvsrPVFTGKDSTEPLKGFHKAMVKTMTA 282
Cdd:TIGR01349 171 KKDIESFVPQS------PASANQQAAATT----------PATYPAAA--------PVSTGSYEDVPLSNIRKIIAKRLLE 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  283 ALK-IPHFGYKDEVDLTRLVQLRKELKGLSEARgVKLSYMPFFIKAASLGLLHFPILNASVDEavQNITYKASHNIGLAM 361
Cdd:TIGR01349 227 SKQtIPHYYVSIECNVDKLLALRKELNAMASEV-YKLSVNDFIIKASALALREVPEANSSWTD--NFIRRYKNVDISVAV 303
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  362 DTSQGLLVPNVKNVQLLSVFEIAVELNRMQTLGATGQLGTADLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALG--KI 439
Cdd:TIGR01349 304 ATPDGLITPIVRNADAKGLSTISNEIKDLAKRARNNKLKPEEFQGGTFTISNLGMFGIKDFTAIINPPQACILAVGavED 383
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 185134993  440 QVLPRFNSRDEVVKAHVMNVSWSADHRIIDGATMARFSNLWRDYLENPASMVL 492
Cdd:TIGR01349 384 VAVVDNDEEKGFAVASIMSVTLSCDHRVIDGAVGAEFLKSFKKYLENPIEMLL 436
PLN02744 PLN02744
dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
43-492 1.32e-47

dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex


Pssm-ID: 215397 [Multi-domain]  Cd Length: 539  Bit Score: 172.73  E-value: 1.32e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  43 FIPQLCSSRFFhtsyvTSGPILPfKLSDIGEGIMEVTVKE-----WYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVI 117
Cdd:PLN02744  93 SSSQMQSARGF-----SSSSDLP-PHQEIGMPSLSPTMTEgniarWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 166
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 118 KKLYYEVDATAL-VGTPL-VDIETE-----------PGPEVVHEEDVVETPAMSNDEHTHQ-----EIKGHKTQ------ 173
Cdd:PLN02744 167 AKIVKGDGAKEIkVGEVIaITVEEEedigkfkdykpSSSAAPAAPKAKPSPPPPKEEEVEKpasspEPKASKPSappssg 246
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 174 ----ATPAVRRLAMENNIKLSEVVGTGRDGRILKEDILNFLAKQTGAILPPTPfheiqppppaasapssasmpkmKPTPS 249
Cdd:PLN02744 247 drifASPLARKLAEDNNVPLSSIKGTGPDGRIVKADIEDYLASGGKGATAPPS----------------------TDSKA 304
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 250 VQLPVVSRPvftgkdsteplkgfhKAMVKTMTAAL------KIPHFGYKDEVDLTRLVQLRKELKGLSEARGVK-LSYMP 322
Cdd:PLN02744 305 PALDYTDIP---------------NTQIRKVTASRllqskqTIPHYYLTVDTRVDKLMALRSQLNSLQEASGGKkISVND 369
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 323 FFIKAASLGLLHFPILNAS-VDEAVQNitYKaSHNIGLAMDTSQGLLVPNVKNVQLLSVFEIAVELNRMQTLGATGQLGT 401
Cdd:PLN02744 370 LVIKAAALALRKVPQCNSSwTDDYIRQ--YH-NVNINVAVQTENGLYVPVVKDADKKGLSTIAEEVKQLAQKARENSLKP 446
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 402 ADLTGGTFTLSNIGS-IGGTYAKPVILPPEVAIGALGKIQ--VLPRfNSRDEVVKAHVMNVSWSADHRIIDGATMARFSN 478
Cdd:PLN02744 447 EDYEGGTFTVSNLGGpFGIKQFCAIINPPQSAILAVGSAEkrVIPG-SGPDQYNFASFMSVTLSCDHRVIDGAIGAEWLK 525
                        490
                 ....*....|....
gi 185134993 479 LWRDYLENPASMVL 492
Cdd:PLN02744 526 AFKGYIENPESMLL 539
PRK14843 PRK14843
dihydrolipoamide acetyltransferase; Provisional
175-492 3.80e-35

dihydrolipoamide acetyltransferase; Provisional


Pssm-ID: 184847 [Multi-domain]  Cd Length: 347  Bit Score: 134.26  E-value: 3.80e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 175 TPAVRRLAMENNIKLSEVVGTGRDGRILKEDILNFLAK--QTGAILPPTPFHEIQPPPPaasapssasmpkmKPTPSVQL 252
Cdd:PRK14843  52 SPLAKRIALEHNIAWQEIQGTGHRGKIMKKDVLALLPEniENDSIKSPAQIEKVEEVPD-------------NVTPYGEI 118
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 253 PVVsrpvftgkdstePLKGFHKAMVKTMTAA-LKIPHFGYKDEVDLTRLVQLRKE-LKGLSEARGVKLSYMPFFIKAASL 330
Cdd:PRK14843 119 ERI------------PMTPMRKVIAQRMVESyLTAPTFTLNYEVDMTEMLALRKKvLEPIMEATGKKTTVTDLLSLAVVK 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 331 GLLHFPILNASVDEAVQNITYKASHNIGLAMDTSQGLLVPNVKNVQLLSVFEIAVELNRMQTLGATGQLGTADLTGGTFT 410
Cdd:PRK14843 187 TLMKHPYINASLTEDGKTIITHNYVNLAMAVGMDNGLMTPVVYNAEKMSLSELVVAFKDVIGRTLDGKLAPSELQNSTFT 266
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 411 LSNIGSIGGTYAKPVILPPEVAI-GALGKIQVLPRFNSrdEVVKAHVMNVSWSADHRIIDGATMARFSNLWRDYLENPAS 489
Cdd:PRK14843 267 ISNLGMFGVQSFGPIINQPNSAIlGVSSTIEKPVVVNG--EIVIRPIMSLGLTIDHRVVDGMAGAKFMKDLKELIETPIS 344

                 ...
gi 185134993 490 MVL 492
Cdd:PRK14843 345 MLI 347
PLN02226 PLN02226
2-oxoglutarate dehydrogenase E2 component
60-494 7.85e-31

2-oxoglutarate dehydrogenase E2 component


Pssm-ID: 177871 [Multi-domain]  Cd Length: 463  Bit Score: 124.48  E-value: 7.85e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  60 SGPILPFKLSDIGEGIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDIET 139
Cdd:PLN02226  88 SGDTVEAVVPHMGESITDGTLATFLKKPGERVQADEAIAQIETDKVTIDIASPASGVIQEFLVKEGDTVEPGTKVAIISK 167
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 140 epgpevvheedvvetpamSNDEHTHQEiKGHKTQATPAVRRLAMENNIKLSEVVGTGrdgrilkedilnfLAKQTGAILP 219
Cdd:PLN02226 168 ------------------SEDAASQVT-PSQKIPETTDPKPSPPAEDKQKPKVESAP-------------VAEKPKAPSS 215
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 220 PTPFHEiqppppaasAPSSASMPKMKPTPSVQLPVVSRPVFTG-KDSTEPLkgfhkAMVKTMtaalkiphfgykDEVDLT 298
Cdd:PLN02226 216 PPPPKQ---------SAKEPQLPPKERERRVPMTRLRKRVATRlKDSQNTF-----ALLTTF------------NEVDMT 269
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 299 RLVQLRKELK-GLSEARGVKLSYMPFFIKAASLGLLHFPILNASVDEavQNITYKASHNIGLAMDTSQGLLVPNVKNVQL 377
Cdd:PLN02226 270 NLMKLRSQYKdAFYEKHGVKLGLMSGFIKAAVSALQHQPVVNAVIDG--DDIIYRDYVDISIAVGTSKGLVVPVIRGADK 347
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993 378 LSVFEIAVELNRMQTLGATGQLGTADLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGKIQVLPRFNSrDEVVKAHVM 457
Cdd:PLN02226 348 MNFAEIEKTINGLAKKANEGTISIDEMAGGSFTVSNGGVYGSLISTPIINPPQSAILGMHSIVSRPMVVG-GSVVPRPMM 426
                        410       420       430
                 ....*....|....*....|....*....|....*..
gi 185134993 458 NVSWSADHRIIDGATMARFSNLWRDYLENPASMVLDL 494
Cdd:PLN02226 427 YVALTYDHRLIDGREAVYFLRRVKDVVEDPQRLLLDI 463
lipoyl_domain cd06849
Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. ...
65-137 2.48e-26

Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid dehydrogenase multienzyme complexes, like pyruvate dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH) and branched-chain 2-oxo acid dehydrogenase (BCDH), contain at least three different enzymes, 2-oxo acid dehydrogenase (E1), dihydrolipoyl acyltransferase (E2) and dihydrolipoamide dehydrogenase (E3) and play a key role in redox regulation. E2, the central component of the complex, catalyzes the transfer of the acyl group of CoA from E1 to E3 via reductive acetylation of a lipoyl group covalently attached to a lysine residue.


Pssm-ID: 133458 [Multi-domain]  Cd Length: 74  Bit Score: 101.71  E-value: 2.48e-26
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 185134993  65 PFKLSDIGEGIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDI 137
Cdd:cd06849    2 EIKMPDLGESMTEGTIVEWLVKEGDSVEEGDVLAEVETDKATVEVEAPAAGVLAKILVEEGDTVPVGQVIAVI 74
AceF COG0508
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component ...
66-137 3.41e-22

Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component [Energy production and conversion]; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component is part of the Pathway/BioSystem: Pyruvate oxidation


Pssm-ID: 440274 [Multi-domain]  Cd Length: 77  Bit Score: 90.13  E-value: 3.41e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 185134993  66 FKLSDIGEGIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDI 137
Cdd:COG0508    5 IKMPDLGESMTEGTIVEWLVKEGDTVKEGDPLAEVETDKATMEVPAPAAGVLLEILVKEGDTVPVGAVIAVI 76
Biotin_lipoyl pfam00364
Biotin-requiring enzyme; This family covers two Prosite entries, the conserved lysine residue ...
65-137 2.24e-19

Biotin-requiring enzyme; This family covers two Prosite entries, the conserved lysine residue binds biotin in one group and lipoic acid in the other. Note that the HMM does not currently recognize the Glycine cleavage system H proteins.


Pssm-ID: 395290 [Multi-domain]  Cd Length: 73  Bit Score: 82.26  E-value: 2.24e-19
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 185134993   65 PFKLSDIGEGIMEVtVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDI 137
Cdd:pfam00364   2 EIKSPMIGESVREG-VVEWLVKVGDKVKAGQPLAEVEAMKMEMEIPAPVAGVVKEILVPEGDTVEVGDPLAKI 73
E3_binding pfam02817
e3 binding domain; This family represents a small domain of the E2 subunit of 2-oxo-acid ...
174-207 9.63e-14

e3 binding domain; This family represents a small domain of the E2 subunit of 2-oxo-acid dehydrogenases responsible for the binding of the E3 subunit.


Pssm-ID: 460710 [Multi-domain]  Cd Length: 36  Bit Score: 65.02  E-value: 9.63e-14
                          10        20        30
                  ....*....|....*....|....*....|....
gi 185134993  174 ATPAVRRLAMENNIKLSEVVGTGRDGRILKEDIL 207
Cdd:pfam02817   3 ASPAARKLARELGIDLSDVKGTGPGGRITKEDVE 36
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
242-476 3.97e-12

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 68.76  E-value: 3.97e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  242 PKMKPTPSVQLPVVSRPVFTGKDSTEPLKGFHKAMVKTMTAALKIPHFGYKDEVDLTRLVQLRKELKG-LSEARGVKLSY 320
Cdd:PRK12270   93 AAAPAAPPAAAAAAAPAAAAVEDEVTPLRGAAAAVAKNMDASLEVPTATSVRAVPAKLLIDNRIVINNhLKRTRGGKVSF 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  321 -------MpffIKAaslgLLHFPILNASVDE------AVQNitykASHNIGLAMDT-----SQGLLVPNVKNV------Q 376
Cdd:PRK12270  173 thligyaL---VQA----LKAFPNMNRHYAEvdgkptLVTP----AHVNLGLAIDLpkkdgSRQLVVPAIKGAetmdfaQ 241
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  377 LLSVFEIAVELNRmqtlgaTGQLGTADLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGKIQVLPRFNSRDEVVKAH- 455
Cdd:PRK12270  242 FWAAYEDIVRRAR------DGKLTADDFQGTTISLTNPGGIGTVHSVPRLMKGQGAIIGVGAMEYPAEFQGASEERLAEl 315
                         250       260
                  ....*....|....*....|....*
gi 185134993  456 ----VMNVSWSADHRIIDGATMARF 476
Cdd:PRK12270  316 giskVMTLTSTYDHRIIQGAESGEF 340
aceF PRK11854
pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated
67-143 3.33e-11

pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated


Pssm-ID: 236999 [Multi-domain]  Cd Length: 633  Bit Score: 65.41  E-value: 3.33e-11
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 185134993  67 KLSDIGEGimEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDIETEPGP 143
Cdd:PRK11854   6 KVPDIGAD--EVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPSPQAGVVKEIKVKVGDKVETGALIMIFESADGA 80
Biotinyl_lipoyl_domains cd06663
Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the ...
68-137 1.99e-09

Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2, acyl, or methylamine, respectively, between components of the complex/protein via a biotinyl or lipoyl group, which is covalently attached to a highly conserved lysine residue.


Pssm-ID: 133456 [Multi-domain]  Cd Length: 73  Bit Score: 53.98  E-value: 1.99e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  68 LSDIGEGIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDI 137
Cdd:cd06663    4 IPDLAQHLGDGTVVKWLKKVGDKVKKGDVLAEIEAMKATSDVEAPKSGTVKKVLVKEGTKVEGDTPLVKI 73
PRK14875 PRK14875
acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
72-219 3.53e-06

acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional


Pssm-ID: 184875 [Multi-domain]  Cd Length: 371  Bit Score: 49.17  E-value: 3.53e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 185134993  72 GEGIMEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDIETEPGPEvvheedv 151
Cdd:PRK14875  11 GLSMTEGKVAGWLVQEGDEVEKGDELLDVETDKITNEVEAPAAGTLRRQVAQEGETLPVGALLAVVADAEVSD------- 83
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 185134993 152 vetpamsndehthQEIKGHktqATPAVRRLAMEnNIKLSEVVGTGRDGRILKEDIlNFLAKQTGAILP 219
Cdd:PRK14875  84 -------------AEIDAF---IAPFARRFAPE-GIDEEDAGPAPRKARIGGRTV-RYLRLGEGDGTP 133
biotinyl_domain cd06850
The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all ...
79-137 2.22e-05

The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase. This domain functions in transferring CO2 from one subsite to another, allowing carboxylation, decarboxylation, or transcarboxylation. During this process, biotin is covalently attached to a specific lysine.


Pssm-ID: 133459 [Multi-domain]  Cd Length: 67  Bit Score: 42.40  E-value: 2.22e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 185134993  79 TVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDI 137
Cdd:cd06850    9 TVVKVLVKEGDKVEAGQPLAVLEAMKMENEVTAPVAGVVKEILVKEGDQVEAGQLLVVI 67
PRK11892 PRK11892
pyruvate dehydrogenase subunit beta; Provisional
77-120 3.15e-03

pyruvate dehydrogenase subunit beta; Provisional


Pssm-ID: 237011 [Multi-domain]  Cd Length: 464  Bit Score: 39.90  E-value: 3.15e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 185134993  77 EVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKL 120
Cdd:PRK11892  16 EGTLAKWLKKEGDKVKSGDVIAEIETDKATMEVEAVDEGTLGKI 59
PRK09282 PRK09282
pyruvate carboxylase subunit B; Validated
76-138 9.01e-03

pyruvate carboxylase subunit B; Validated


Pssm-ID: 236449 [Multi-domain]  Cd Length: 592  Bit Score: 38.67  E-value: 9.01e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 185134993  76 MEVTVKEWYVKEGDKVSQFDSICEVQSDKASVTITSRYDGVIKKLYYEVDATALVGTPLVDIE 138
Cdd:PRK09282 529 MPGTVVKVKVKEGDKVKAGDTVLVLEAMKMENEIQAPVDGTVKEILVKEGDRVNPGDVLMEIE 591
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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