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Full Results
photosystem I P700 apoprotein A1 (chloroplast) [Araucaria cunninghamii]
Protein Classification
photosystem I core protein PsaA ( domain architecture ID 10000059 )
photosystem I core protein PsaA binds P700, the primary electron donor of PSI, which is a plastocyanin-ferredoxin oxidoreductase essential for light-driven electron transport
List of domain hits
Name
Accession
Description
Interval
E-value
psaA
CHL00056 photosystem I P700 chlorophyll a apoprotein A1
1-750
0e+00
photosystem I P700 chlorophyll a apoprotein A1
Pssm-ID: 176996
Cd Length: 750
Bit Score: 1647.16
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 1 MIIRSPEPEVKI V V E RDP I KTSFEKWAKPGHFS K TL S KGP N TTTWIWNLHADAHDFDSHT D DLEEISRKVFSAHFGQL A I 80
Cdd:CHL00056 1 MIIRSPEPEVKI L V D RDP V KTSFEKWAKPGHFS R TL A KGP D TTTWIWNLHADAHDFDSHT S DLEEISRKVFSAHFGQL S I 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 81 IF I WLSGMYFHGARFSNYEAWLSDPTHIKPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTA 160
Cdd:CHL00056 81 IF L WLSGMYFHGARFSNYEAWLSDPTHIKPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTA 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 161 IG G L I FAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLG I GSLSWAGHQ V HVSLPINQLLDAGVDPKEIPLPHEF 240
Cdd:CHL00056 161 IG A L V FAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLG L GSLSWAGHQ I HVSLPINQLLDAGVDPKEIPLPHEF 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 241 ILNRDLLAQLYPSFAKGLTPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTD TV HHHLAIAVLFLIAGHMYRTNW S IGHSLK 320
Cdd:CHL00056 241 ILNRDLLAQLYPSFAKGLTPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTD IA HHHLAIAVLFLIAGHMYRTNW G IGHSLK 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 321 EILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAMLGSLTI V VAHHMYSMPPYPYLA I DYGTQLSLFTHHMWIGGFLIV 400
Cdd:CHL00056 321 EILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAMLGSLTI I VAHHMYSMPPYPYLA T DYGTQLSLFTHHMWIGGFLIV 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 401 GAAAHAAIFMVRDYDPTT Q YNNLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPIF 480
Cdd:CHL00056 401 GAAAHAAIFMVRDYDPTT R YNNLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPIF 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 481 AQWIQNTHA S AP SL TAP D ATASTSLTWGGGDLVAVG N KVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRL 560
Cdd:CHL00056 481 AQWIQNTHA L AP GA TAP G ATASTSLTWGGGDLVAVG G KVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRL 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 561 IPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN A ISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSIT 640
Cdd:CHL00056 561 IPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN S ISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSIT 640
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 641 INGWLRDFLWAQASQVIQSYGSSLSAYGL L FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSIV 720
Cdd:CHL00056 641 INGWLRDFLWAQASQVIQSYGSSLSAYGL F FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSIV 720
730 740 750
....*....|....*....|....*....|
gi 1847741642 721 QGRAVGVAHYLLGGIATTWAFFLARIIAVG 750
Cdd:CHL00056 721 QGRAVGVAHYLLGGIATTWAFFLARIIAVG 750
Name
Accession
Description
Interval
E-value
psaA
CHL00056 photosystem I P700 chlorophyll a apoprotein A1
1-750
0e+00
photosystem I P700 chlorophyll a apoprotein A1
Pssm-ID: 176996
Cd Length: 750
Bit Score: 1647.16
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 1 MIIRSPEPEVKI V V E RDP I KTSFEKWAKPGHFS K TL S KGP N TTTWIWNLHADAHDFDSHT D DLEEISRKVFSAHFGQL A I 80
Cdd:CHL00056 1 MIIRSPEPEVKI L V D RDP V KTSFEKWAKPGHFS R TL A KGP D TTTWIWNLHADAHDFDSHT S DLEEISRKVFSAHFGQL S I 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 81 IF I WLSGMYFHGARFSNYEAWLSDPTHIKPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTA 160
Cdd:CHL00056 81 IF L WLSGMYFHGARFSNYEAWLSDPTHIKPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTA 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 161 IG G L I FAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLG I GSLSWAGHQ V HVSLPINQLLDAGVDPKEIPLPHEF 240
Cdd:CHL00056 161 IG A L V FAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLG L GSLSWAGHQ I HVSLPINQLLDAGVDPKEIPLPHEF 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 241 ILNRDLLAQLYPSFAKGLTPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTD TV HHHLAIAVLFLIAGHMYRTNW S IGHSLK 320
Cdd:CHL00056 241 ILNRDLLAQLYPSFAKGLTPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTD IA HHHLAIAVLFLIAGHMYRTNW G IGHSLK 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 321 EILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAMLGSLTI V VAHHMYSMPPYPYLA I DYGTQLSLFTHHMWIGGFLIV 400
Cdd:CHL00056 321 EILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAMLGSLTI I VAHHMYSMPPYPYLA T DYGTQLSLFTHHMWIGGFLIV 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 401 GAAAHAAIFMVRDYDPTT Q YNNLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPIF 480
Cdd:CHL00056 401 GAAAHAAIFMVRDYDPTT R YNNLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPIF 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 481 AQWIQNTHA S AP SL TAP D ATASTSLTWGGGDLVAVG N KVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRL 560
Cdd:CHL00056 481 AQWIQNTHA L AP GA TAP G ATASTSLTWGGGDLVAVG G KVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRL 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 561 IPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN A ISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSIT 640
Cdd:CHL00056 561 IPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN S ISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSIT 640
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 641 INGWLRDFLWAQASQVIQSYGSSLSAYGL L FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSIV 720
Cdd:CHL00056 641 INGWLRDFLWAQASQVIQSYGSSLSAYGL F FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSIV 720
730 740 750
....*....|....*....|....*....|
gi 1847741642 721 QGRAVGVAHYLLGGIATTWAFFLARIIAVG 750
Cdd:CHL00056 721 QGRAVGVAHYLLGGIATTWAFFLARIIAVG 750
psaA
TIGR01335 photosystem I core protein PsaA; The core proteins of photosystem I are PsaA and PsaB, ...
1-750
0e+00
photosystem I core protein PsaA; The core proteins of photosystem I are PsaA and PsaB, homologous integral membrane proteins that form a heterodimer. The heterodimer binds the electron-donating chlorophyll dimer P700, as well as chlorophyll, phylloquinone, and 4FE-4S electron acceptors. This model describes PsaA only. [Energy metabolism, Photosynthesis]
Pssm-ID: 130402 [Multi-domain]
Cd Length: 752
Bit Score: 1478.66
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 1 M I I RS PE P E --- V KI V V E RDP IK TSFEKWAKPGHFS K TL S KGP N TTTWIWNLHADAHDFDSHT D DLE E ISRK V FSAHFGQ 77
Cdd:TIGR01335 1 M T I SP PE R E qkt A KI L V D RDP VP TSFEKWAKPGHFS R TL A KGP K TTTWIWNLHADAHDFDSHT S DLE D ISRK I FSAHFGQ 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 78 L AI IFIWLSGMYFHGARFSNYEAWLSDPTHIKPSAQVVWPIVGQEILNGDVGGGF R GIQITSGFFQ I WRASGIT S ELQLY 157
Cdd:TIGR01335 81 L SV IFIWLSGMYFHGARFSNYEAWLSDPTHIKPSAQVVWPIVGQEILNGDVGGGF H GIQITSGFFQ L WRASGIT N ELQLY 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 158 C TAIGGL IF A A LMLFAGWFHYHKAAPKL A WFQ D VESMLNHHLAGLLG I GSLSWAGHQ V HVSLPIN Q LLDAGVDPK E IPLP 237
Cdd:TIGR01335 161 V TAIGGL VM A G LMLFAGWFHYHKAAPKL E WFQ N VESMLNHHLAGLLG L GSLSWAGHQ I HVSLPIN K LLDAGVDPK D IPLP 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 238 HEFILNR D L L AQLYPSFA K GLTPFFTLNW SE YSDFLTFRGGLNPVTGGLWL T D TV HHHLAIAVLF L IAGHMYRTNW S IGH 317
Cdd:TIGR01335 241 HEFILNR E L M AQLYPSFA S GLTPFFTLNW GA YSDFLTFRGGLNPVTGGLWL S D IA HHHLAIAVLF I IAGHMYRTNW G IGH 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 318 S L KEILEAHKGPFTG E GHKGLYE I LTTSWHAQLA L NLAMLGSL T I V VAHHMY S MPPYPYLA I DY G TQLSLFTHHMWIGGF 397
Cdd:TIGR01335 321 S I KEILEAHKGPFTG S GHKGLYE A LTTSWHAQLA I NLAMLGSL S I I VAHHMY A MPPYPYLA T DY P TQLSLFTHHMWIGGF 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 398 LIVGAAAH A AIFMVRDYDP TTQ YNN L LDRV L RHRDAIISHLNWVCIFLGFHSFGLYIHNDTM S ALGRPQDMFSDTAIQLQ 477
Cdd:TIGR01335 401 LIVGAAAH G AIFMVRDYDP SQN YNN V LDRV I RHRDAIISHLNWVCIFLGFHSFGLYIHNDTM R ALGRPQDMFSDTAIQLQ 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 478 P I FAQWIQN T H AS AP SL TAP D A T A S TS LTW g GG DL VAVG N KVA LL PI P LGTADF L VHHIHAFTIHVTVLILLKGVLFAR S 557
Cdd:TIGR01335 481 P V FAQWIQN L H TL AP GN TAP N A L A T TS YAF - GG EV VAVG G KVA MM PI K LGTADF M VHHIHAFTIHVTVLILLKGVLFAR N 559
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 558 SRLIPDKANLGFRFPCDGPGRGGTCQVS A WDHVFLGLFWMYN A ISVVIFHFSWKMQSDVWG SI S DQ G V V T HITGGNFAQS 637
Cdd:TIGR01335 560 SRLIPDKANLGFRFPCDGPGRGGTCQVS G WDHVFLGLFWMYN C ISVVIFHFSWKMQSDVWG TV S QN G L V S HITGGNFAQS 639
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 638 S ITINGWLRDFLWAQASQVIQSYGSSLSAYGL L FLGAHF V WAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRAL 717
Cdd:TIGR01335 640 A ITINGWLRDFLWAQASQVIQSYGSSLSAYGL M FLGAHF I WAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRAL 719
730 740 750
....*....|....*....|....*....|...
gi 1847741642 718 SI V QGRAVGVAHYLLGGIATTWAFFLARII A VG 750
Cdd:TIGR01335 720 SI I QGRAVGVAHYLLGGIATTWAFFLARII S VG 752
PsaA
COG5701 Photosystem I reaction center subunit A1, PsaA [Energy production and conversion]; Photosystem ...
1-750
0e+00
Photosystem I reaction center subunit A1, PsaA [Energy production and conversion]; Photosystem I reaction center subunit A1, PsaA is part of the Pathway/BioSystem: Photosystem I
Pssm-ID: 444411
Cd Length: 755
Bit Score: 1409.98
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 1 M I I RS PE P E -- V KIV V ER DP IK TSFEKW A KPGHF SK TL S KGP N TTTWIWNLHA D AHDFD S HT D DLEEISRK V FSAHFG Q L 78
Cdd:COG5701 1 M T I SP PE R E ek V RVP V DN DP VP TSFEKW G KPGHF DR TL A KGP K TTTWIWNLHA L AHDFD T HT S DLEEISRK I FSAHFG H L 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 79 A II FIWLSGM Y FHGARFSNY E AWL S DPT HI KPSAQVVWPIVGQEILN G DVGGGF R GIQITSG F FQ I WRA S GIT S E L QLYC 158
Cdd:COG5701 81 A VV FIWLSGM F FHGARFSNY T AWL A DPT GV KPSAQVVWPIVGQEILN A DVGGGF H GIQITSG L FQ M WRA W GIT N E F QLYC 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 159 TAIG G L IF AALMLFAGWFHYHK A APKL A WFQ D VESMLNHHLAGLLG I GSL S W A GH QV HVSLP I N Q LLDAGV DPKE IPLPH 238
Cdd:COG5701 161 TAIG A L VM AALMLFAGWFHYHK R APKL E WFQ N VESMLNHHLAGLLG L GSL A W T GH LI HVSLP V N A LLDAGV AAAD IPLPH 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 239 EF i LN RD L L AQLYP S FA K G LT PFFTLNW SEY SDFLTF R GGLNPVTGGLWLTD TV HHHLAIAVLF L IAGHMYRTNW S IGHS 318
Cdd:COG5701 241 EF - LN PS L M AQLYP G FA S G VG PFFTLNW GAF SDFLTF K GGLNPVTGGLWLTD IA HHHLAIAVLF I IAGHMYRTNW G IGHS 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 319 L KEILEAHKGP --- FTG - EGHKGLYE I LTTSWHAQLA L NLAM L GSL T I V VAHHMY S MPPYPYLA I DY G TQLSLFTHHMWI 394
Cdd:COG5701 320 M KEILEAHKGP pll FTG p EGHKGLYE V LTTSWHAQLA I NLAM M GSL S I I VAHHMY A MPPYPYLA T DY P TQLSLFTHHMWI 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 395 GGFLIVGAAAHAAIFMVRDYDP TTQY NN L LDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTM S ALGRPQDMFSDTAI 474
Cdd:COG5701 400 GGFLIVGAAAHAAIFMVRDYDP AVNQ NN V LDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTM R ALGRPQDMFSDTAI 479
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 475 QLQP I FAQWIQN T HASAP - SL TAP D A TAST S LTW GG g D L VAVG N KVA LL PIPLGTADF LV HHIHAFTIHVTVLILLKGVL 553
Cdd:COG5701 480 QLQP V FAQWIQN L HASAP g TA TAP N A GGTV S EAF GG - D V VAVG G KVA MM PIPLGTADF MI HHIHAFTIHVTVLILLKGVL 558
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 554 FARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN AI SVVIFHFSWKMQSDVWG SISDQ G V V T HITGGN 633
Cdd:COG5701 559 FARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN SL SVVIFHFSWKMQSDVWG TVNAD G S V N HITGGN 638
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 634 FAQSSITINGWLRDFLWAQ A SQVI Q SYGS S LSAYGL L FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQ 713
Cdd:COG5701 639 FAQSSITINGWLRDFLWAQ S SQVI N SYGS A LSAYGL M FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQ 718
730 740 750
....*....|....*....|....*....|....*..
gi 1847741642 714 PRALSI V QGRAVGVAHYLLGGIATTWAFFLAR I IA V G 750
Cdd:COG5701 719 PRALSI T QGRAVGVAHYLLGGIATTWAFFLAR L IA L G 755
PsaA_PsaB
pfam00223 Photosystem I psaA/psaB protein;
32-744
0e+00
Photosystem I psaA/psaB protein;
Pssm-ID: 459719
Cd Length: 719
Bit Score: 1297.82
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 32 FS KT L SK GP N TT T WIWNLHA D AHDF D SH TD D L EE I SRK V FSAHFG Q LAIIF I WLSG MY FHGA R FSN Y EAWL S DP T H I KP S 111
Cdd:pfam00223 1 FS QD L AQ GP K TT R WIWNLHA T AHDF E SH DG D T EE L SRK I FSAHFG H LAIIF L WLSG NL FHGA W FSN F EAWL A DP L H V KP I 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 112 A Q VVWP IV GQEILN G -- DVG G GF R G I QITSG F FQ I WR AS G I T SEL QLY CT AIG G LI F AALMLFAGW F HYHK A APKL A WF Q 189
Cdd:pfam00223 81 A H VVWP HF GQEILN A ft DVG A GF P G V QITSG L FQ W WR TI G M T TNG QLY AG AIG L LI L AALMLFAGW L HYHK F APKL E WF K 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 190 DV ESMLNHHLAGL L G I GSL S W A GH QV HV SL P INQ LLDAGV DPKE IPLPH E F i LN R DL LA QLYPSFA K GL T PFFT L NW SE Y 269
Cdd:pfam00223 161 NA ESMLNHHLAGL F G L GSL A W T GH LI HV AI P ESR LLDAGV AAAD IPLPH P F - LN P DL MG QLYPSFA A GL G PFFT G NW GA Y 239
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 270 S D F LTF R GGL N P V TG G LWLTD TV HHHLAIAVLF L IAGHMYRTN WS IGHS L KEILEAHKGP -- FTGEGHKGLYE I L TT SWH 347
Cdd:pfam00223 240 A D I LTF K GGL H P Q TG S LWLTD IA HHHLAIAVLF I IAGHMYRTN FG IGHS M KEILEAHKGP gg FTGEGHKGLYE T L NN SWH 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 348 AQL A LNLAMLGS L TI V VAHHMY SM PPYPY L A I DY G TQ LS LFTHH M WIGGFL I VGA A AH A AIFMVRDYDP TTQY NN L LDRV 427
Cdd:pfam00223 320 AQL G LNLAMLGS V TI I VAHHMY AL PPYPY I A T DY T TQ AA LFTHH Q WIGGFL M VGA F AH G AIFMVRDYDP EVNK NN V LDRV 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 428 L R HRDAIISHL N WVC I FLGFH S FGLY I HNDTM S A L GRP Q DMFSDTAI Q L Q P I FAQWIQ ---------- N TH ASAP SL TAP 497
Cdd:pfam00223 400 L E HRDAIISHL S WVC L FLGFH T FGLY V HNDTM R A F GRP E DMFSDTAI L L E P V FAQWIQ aahgkalygf N LL ASAP GS TAP 479
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 498 D A T A ST S LT W GG GD L V A VG N KV A L L PIPLGTADFLVHHI H AF T IHVTVLILLKGVL F ARSSRL I PDK AN LGFRFPCDGPG 577
Cdd:pfam00223 480 N A G A GV S DV W LP GD A V N VG G KV S L F PIPLGTADFLVHHI I AF G IHVTVLILLKGVL D ARSSRL M PDK KD LGFRFPCDGPG 559
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 578 RGGTCQ V SAWDHVFLGLFWMYN A IS V VIF H F S WKMQSDVWG SIS dqgvvth ITGG N FAQSSI T INGWLRDFLWAQ A SQVI 657
Cdd:pfam00223 560 RGGTCQ I SAWDHVFLGLFWMYN T IS W VIF Y F H WKMQSDVWG GNV ------- ITGG Q FAQSSI Y INGWLRDFLWAQ S SQVI 632
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 658 Q SYG S SLS A YGL L FLG A HFVWAFSLMFLFSGRGYWQELIESIVWAHNKLK V AP A IQPRALSIVQGRAVGVAH Y LLGGI A T 737
Cdd:pfam00223 633 N SYG N SLS V YGL M FLG G HFVWAFSLMFLFSGRGYWQELIESIVWAHNKLK L AP L IQPRALSIVQGRAVGVAH F LLGGI V T 712
....*..
gi 1847741642 738 TWAFF L A 744
Cdd:pfam00223 713 TWAFF I A 719
Name
Accession
Description
Interval
E-value
psaA
CHL00056 photosystem I P700 chlorophyll a apoprotein A1
1-750
0e+00
photosystem I P700 chlorophyll a apoprotein A1
Pssm-ID: 176996
Cd Length: 750
Bit Score: 1647.16
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 1 MIIRSPEPEVKI V V E RDP I KTSFEKWAKPGHFS K TL S KGP N TTTWIWNLHADAHDFDSHT D DLEEISRKVFSAHFGQL A I 80
Cdd:CHL00056 1 MIIRSPEPEVKI L V D RDP V KTSFEKWAKPGHFS R TL A KGP D TTTWIWNLHADAHDFDSHT S DLEEISRKVFSAHFGQL S I 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 81 IF I WLSGMYFHGARFSNYEAWLSDPTHIKPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTA 160
Cdd:CHL00056 81 IF L WLSGMYFHGARFSNYEAWLSDPTHIKPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTA 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 161 IG G L I FAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLG I GSLSWAGHQ V HVSLPINQLLDAGVDPKEIPLPHEF 240
Cdd:CHL00056 161 IG A L V FAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLG L GSLSWAGHQ I HVSLPINQLLDAGVDPKEIPLPHEF 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 241 ILNRDLLAQLYPSFAKGLTPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTD TV HHHLAIAVLFLIAGHMYRTNW S IGHSLK 320
Cdd:CHL00056 241 ILNRDLLAQLYPSFAKGLTPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTD IA HHHLAIAVLFLIAGHMYRTNW G IGHSLK 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 321 EILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAMLGSLTI V VAHHMYSMPPYPYLA I DYGTQLSLFTHHMWIGGFLIV 400
Cdd:CHL00056 321 EILEAHKGPFTGEGHKGLYEILTTSWHAQLALNLAMLGSLTI I VAHHMYSMPPYPYLA T DYGTQLSLFTHHMWIGGFLIV 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 401 GAAAHAAIFMVRDYDPTT Q YNNLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPIF 480
Cdd:CHL00056 401 GAAAHAAIFMVRDYDPTT R YNNLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPIF 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 481 AQWIQNTHA S AP SL TAP D ATASTSLTWGGGDLVAVG N KVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRL 560
Cdd:CHL00056 481 AQWIQNTHA L AP GA TAP G ATASTSLTWGGGDLVAVG G KVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRL 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 561 IPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN A ISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSIT 640
Cdd:CHL00056 561 IPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN S ISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSIT 640
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 641 INGWLRDFLWAQASQVIQSYGSSLSAYGL L FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSIV 720
Cdd:CHL00056 641 INGWLRDFLWAQASQVIQSYGSSLSAYGL F FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSIV 720
730 740 750
....*....|....*....|....*....|
gi 1847741642 721 QGRAVGVAHYLLGGIATTWAFFLARIIAVG 750
Cdd:CHL00056 721 QGRAVGVAHYLLGGIATTWAFFLARIIAVG 750
psaA
TIGR01335 photosystem I core protein PsaA; The core proteins of photosystem I are PsaA and PsaB, ...
1-750
0e+00
photosystem I core protein PsaA; The core proteins of photosystem I are PsaA and PsaB, homologous integral membrane proteins that form a heterodimer. The heterodimer binds the electron-donating chlorophyll dimer P700, as well as chlorophyll, phylloquinone, and 4FE-4S electron acceptors. This model describes PsaA only. [Energy metabolism, Photosynthesis]
Pssm-ID: 130402 [Multi-domain]
Cd Length: 752
Bit Score: 1478.66
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 1 M I I RS PE P E --- V KI V V E RDP IK TSFEKWAKPGHFS K TL S KGP N TTTWIWNLHADAHDFDSHT D DLE E ISRK V FSAHFGQ 77
Cdd:TIGR01335 1 M T I SP PE R E qkt A KI L V D RDP VP TSFEKWAKPGHFS R TL A KGP K TTTWIWNLHADAHDFDSHT S DLE D ISRK I FSAHFGQ 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 78 L AI IFIWLSGMYFHGARFSNYEAWLSDPTHIKPSAQVVWPIVGQEILNGDVGGGF R GIQITSGFFQ I WRASGIT S ELQLY 157
Cdd:TIGR01335 81 L SV IFIWLSGMYFHGARFSNYEAWLSDPTHIKPSAQVVWPIVGQEILNGDVGGGF H GIQITSGFFQ L WRASGIT N ELQLY 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 158 C TAIGGL IF A A LMLFAGWFHYHKAAPKL A WFQ D VESMLNHHLAGLLG I GSLSWAGHQ V HVSLPIN Q LLDAGVDPK E IPLP 237
Cdd:TIGR01335 161 V TAIGGL VM A G LMLFAGWFHYHKAAPKL E WFQ N VESMLNHHLAGLLG L GSLSWAGHQ I HVSLPIN K LLDAGVDPK D IPLP 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 238 HEFILNR D L L AQLYPSFA K GLTPFFTLNW SE YSDFLTFRGGLNPVTGGLWL T D TV HHHLAIAVLF L IAGHMYRTNW S IGH 317
Cdd:TIGR01335 241 HEFILNR E L M AQLYPSFA S GLTPFFTLNW GA YSDFLTFRGGLNPVTGGLWL S D IA HHHLAIAVLF I IAGHMYRTNW G IGH 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 318 S L KEILEAHKGPFTG E GHKGLYE I LTTSWHAQLA L NLAMLGSL T I V VAHHMY S MPPYPYLA I DY G TQLSLFTHHMWIGGF 397
Cdd:TIGR01335 321 S I KEILEAHKGPFTG S GHKGLYE A LTTSWHAQLA I NLAMLGSL S I I VAHHMY A MPPYPYLA T DY P TQLSLFTHHMWIGGF 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 398 LIVGAAAH A AIFMVRDYDP TTQ YNN L LDRV L RHRDAIISHLNWVCIFLGFHSFGLYIHNDTM S ALGRPQDMFSDTAIQLQ 477
Cdd:TIGR01335 401 LIVGAAAH G AIFMVRDYDP SQN YNN V LDRV I RHRDAIISHLNWVCIFLGFHSFGLYIHNDTM R ALGRPQDMFSDTAIQLQ 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 478 P I FAQWIQN T H AS AP SL TAP D A T A S TS LTW g GG DL VAVG N KVA LL PI P LGTADF L VHHIHAFTIHVTVLILLKGVLFAR S 557
Cdd:TIGR01335 481 P V FAQWIQN L H TL AP GN TAP N A L A T TS YAF - GG EV VAVG G KVA MM PI K LGTADF M VHHIHAFTIHVTVLILLKGVLFAR N 559
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 558 SRLIPDKANLGFRFPCDGPGRGGTCQVS A WDHVFLGLFWMYN A ISVVIFHFSWKMQSDVWG SI S DQ G V V T HITGGNFAQS 637
Cdd:TIGR01335 560 SRLIPDKANLGFRFPCDGPGRGGTCQVS G WDHVFLGLFWMYN C ISVVIFHFSWKMQSDVWG TV S QN G L V S HITGGNFAQS 639
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 638 S ITINGWLRDFLWAQASQVIQSYGSSLSAYGL L FLGAHF V WAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRAL 717
Cdd:TIGR01335 640 A ITINGWLRDFLWAQASQVIQSYGSSLSAYGL M FLGAHF I WAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRAL 719
730 740 750
....*....|....*....|....*....|...
gi 1847741642 718 SI V QGRAVGVAHYLLGGIATTWAFFLARII A VG 750
Cdd:TIGR01335 720 SI I QGRAVGVAHYLLGGIATTWAFFLARII S VG 752
PsaA
COG5701 Photosystem I reaction center subunit A1, PsaA [Energy production and conversion]; Photosystem ...
1-750
0e+00
Photosystem I reaction center subunit A1, PsaA [Energy production and conversion]; Photosystem I reaction center subunit A1, PsaA is part of the Pathway/BioSystem: Photosystem I
Pssm-ID: 444411
Cd Length: 755
Bit Score: 1409.98
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 1 M I I RS PE P E -- V KIV V ER DP IK TSFEKW A KPGHF SK TL S KGP N TTTWIWNLHA D AHDFD S HT D DLEEISRK V FSAHFG Q L 78
Cdd:COG5701 1 M T I SP PE R E ek V RVP V DN DP VP TSFEKW G KPGHF DR TL A KGP K TTTWIWNLHA L AHDFD T HT S DLEEISRK I FSAHFG H L 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 79 A II FIWLSGM Y FHGARFSNY E AWL S DPT HI KPSAQVVWPIVGQEILN G DVGGGF R GIQITSG F FQ I WRA S GIT S E L QLYC 158
Cdd:COG5701 81 A VV FIWLSGM F FHGARFSNY T AWL A DPT GV KPSAQVVWPIVGQEILN A DVGGGF H GIQITSG L FQ M WRA W GIT N E F QLYC 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 159 TAIG G L IF AALMLFAGWFHYHK A APKL A WFQ D VESMLNHHLAGLLG I GSL S W A GH QV HVSLP I N Q LLDAGV DPKE IPLPH 238
Cdd:COG5701 161 TAIG A L VM AALMLFAGWFHYHK R APKL E WFQ N VESMLNHHLAGLLG L GSL A W T GH LI HVSLP V N A LLDAGV AAAD IPLPH 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 239 EF i LN RD L L AQLYP S FA K G LT PFFTLNW SEY SDFLTF R GGLNPVTGGLWLTD TV HHHLAIAVLF L IAGHMYRTNW S IGHS 318
Cdd:COG5701 241 EF - LN PS L M AQLYP G FA S G VG PFFTLNW GAF SDFLTF K GGLNPVTGGLWLTD IA HHHLAIAVLF I IAGHMYRTNW G IGHS 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 319 L KEILEAHKGP --- FTG - EGHKGLYE I LTTSWHAQLA L NLAM L GSL T I V VAHHMY S MPPYPYLA I DY G TQLSLFTHHMWI 394
Cdd:COG5701 320 M KEILEAHKGP pll FTG p EGHKGLYE V LTTSWHAQLA I NLAM M GSL S I I VAHHMY A MPPYPYLA T DY P TQLSLFTHHMWI 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 395 GGFLIVGAAAHAAIFMVRDYDP TTQY NN L LDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTM S ALGRPQDMFSDTAI 474
Cdd:COG5701 400 GGFLIVGAAAHAAIFMVRDYDP AVNQ NN V LDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTM R ALGRPQDMFSDTAI 479
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 475 QLQP I FAQWIQN T HASAP - SL TAP D A TAST S LTW GG g D L VAVG N KVA LL PIPLGTADF LV HHIHAFTIHVTVLILLKGVL 553
Cdd:COG5701 480 QLQP V FAQWIQN L HASAP g TA TAP N A GGTV S EAF GG - D V VAVG G KVA MM PIPLGTADF MI HHIHAFTIHVTVLILLKGVL 558
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 554 FARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN AI SVVIFHFSWKMQSDVWG SISDQ G V V T HITGGN 633
Cdd:COG5701 559 FARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYN SL SVVIFHFSWKMQSDVWG TVNAD G S V N HITGGN 638
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 634 FAQSSITINGWLRDFLWAQ A SQVI Q SYGS S LSAYGL L FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQ 713
Cdd:COG5701 639 FAQSSITINGWLRDFLWAQ S SQVI N SYGS A LSAYGL M FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQ 718
730 740 750
....*....|....*....|....*....|....*..
gi 1847741642 714 PRALSI V QGRAVGVAHYLLGGIATTWAFFLAR I IA V G 750
Cdd:COG5701 719 PRALSI T QGRAVGVAHYLLGGIATTWAFFLAR L IA L G 755
PsaA_PsaB
pfam00223 Photosystem I psaA/psaB protein;
32-744
0e+00
Photosystem I psaA/psaB protein;
Pssm-ID: 459719
Cd Length: 719
Bit Score: 1297.82
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 32 FS KT L SK GP N TT T WIWNLHA D AHDF D SH TD D L EE I SRK V FSAHFG Q LAIIF I WLSG MY FHGA R FSN Y EAWL S DP T H I KP S 111
Cdd:pfam00223 1 FS QD L AQ GP K TT R WIWNLHA T AHDF E SH DG D T EE L SRK I FSAHFG H LAIIF L WLSG NL FHGA W FSN F EAWL A DP L H V KP I 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 112 A Q VVWP IV GQEILN G -- DVG G GF R G I QITSG F FQ I WR AS G I T SEL QLY CT AIG G LI F AALMLFAGW F HYHK A APKL A WF Q 189
Cdd:pfam00223 81 A H VVWP HF GQEILN A ft DVG A GF P G V QITSG L FQ W WR TI G M T TNG QLY AG AIG L LI L AALMLFAGW L HYHK F APKL E WF K 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 190 DV ESMLNHHLAGL L G I GSL S W A GH QV HV SL P INQ LLDAGV DPKE IPLPH E F i LN R DL LA QLYPSFA K GL T PFFT L NW SE Y 269
Cdd:pfam00223 161 NA ESMLNHHLAGL F G L GSL A W T GH LI HV AI P ESR LLDAGV AAAD IPLPH P F - LN P DL MG QLYPSFA A GL G PFFT G NW GA Y 239
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 270 S D F LTF R GGL N P V TG G LWLTD TV HHHLAIAVLF L IAGHMYRTN WS IGHS L KEILEAHKGP -- FTGEGHKGLYE I L TT SWH 347
Cdd:pfam00223 240 A D I LTF K GGL H P Q TG S LWLTD IA HHHLAIAVLF I IAGHMYRTN FG IGHS M KEILEAHKGP gg FTGEGHKGLYE T L NN SWH 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 348 AQL A LNLAMLGS L TI V VAHHMY SM PPYPY L A I DY G TQ LS LFTHH M WIGGFL I VGA A AH A AIFMVRDYDP TTQY NN L LDRV 427
Cdd:pfam00223 320 AQL G LNLAMLGS V TI I VAHHMY AL PPYPY I A T DY T TQ AA LFTHH Q WIGGFL M VGA F AH G AIFMVRDYDP EVNK NN V LDRV 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 428 L R HRDAIISHL N WVC I FLGFH S FGLY I HNDTM S A L GRP Q DMFSDTAI Q L Q P I FAQWIQ ---------- N TH ASAP SL TAP 497
Cdd:pfam00223 400 L E HRDAIISHL S WVC L FLGFH T FGLY V HNDTM R A F GRP E DMFSDTAI L L E P V FAQWIQ aahgkalygf N LL ASAP GS TAP 479
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 498 D A T A ST S LT W GG GD L V A VG N KV A L L PIPLGTADFLVHHI H AF T IHVTVLILLKGVL F ARSSRL I PDK AN LGFRFPCDGPG 577
Cdd:pfam00223 480 N A G A GV S DV W LP GD A V N VG G KV S L F PIPLGTADFLVHHI I AF G IHVTVLILLKGVL D ARSSRL M PDK KD LGFRFPCDGPG 559
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 578 RGGTCQ V SAWDHVFLGLFWMYN A IS V VIF H F S WKMQSDVWG SIS dqgvvth ITGG N FAQSSI T INGWLRDFLWAQ A SQVI 657
Cdd:pfam00223 560 RGGTCQ I SAWDHVFLGLFWMYN T IS W VIF Y F H WKMQSDVWG GNV ------- ITGG Q FAQSSI Y INGWLRDFLWAQ S SQVI 632
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 658 Q SYG S SLS A YGL L FLG A HFVWAFSLMFLFSGRGYWQELIESIVWAHNKLK V AP A IQPRALSIVQGRAVGVAH Y LLGGI A T 737
Cdd:pfam00223 633 N SYG N SLS V YGL M FLG G HFVWAFSLMFLFSGRGYWQELIESIVWAHNKLK L AP L IQPRALSIVQGRAVGVAH F LLGGI V T 712
....*..
gi 1847741642 738 TWAFF L A 744
Cdd:pfam00223 713 TWAFF I A 719
psaB
CHL00054 photosystem I P700 chlorophyll a apoprotein A2
32-744
0e+00
photosystem I P700 chlorophyll a apoprotein A2
Pssm-ID: 176995
Cd Length: 734
Bit Score: 694.54
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 32 FS KT L SKG P n TT TW IW NLH A D AHDF D SH T D DL EE - ISR K V F SA HFGQLAIIF I W L SG MY FH G A RFS N Y EAW LS DP T H IK P 110
Cdd:CHL00054 8 FS QG L AQD P - TT RR IW FGI A T AHDF E SH D D IT EE r LYQ K I F AS HFGQLAIIF L W T SG NL FH V A WQG N F EAW VQ DP L H VR P 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 111 S A QVV W - P IV GQ EILNGDVG GG FR G - IQ I - T SG FF Q I W RAS G ITSELQ LY CT A IGG L IFA AL M L F AGW F H YH - K AA P KLA 186
Cdd:CHL00054 87 I A HAI W d P HF GQ PAVEAFTR GG AL G p VN I a Y SG VY Q W W YTI G LRTNED LY TG A LFL L FLS AL S L I AGW L H LQ p K WK P SVS 166
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 187 WF QDV ES M LNHHL A GL L G IG SL S W A GH Q VHV SL P INQLLDAGVDPKEIP LPH efilnrdllaqlypsf AK GL T P F FT LN W 266
Cdd:CHL00054 167 WF KNA ES R LNHHL S GL F G VS SL A W T GH L VHV AI P ESRGEHVRWNNFLDV LPH ---------------- PQ GL G P L FT GQ W 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 267 SE Y SD ------------------ F LTF R GG LN P V T GG LWLTD TV HHHLAIAV L FLIAGHMYRTN WS IGHS L K E ILEAH KG 328
Cdd:CHL00054 231 NL Y AQ npdssshlfgtsqgagta I LTF L GG FH P Q T QS LWLTD IA HHHLAIAV V FLIAGHMYRTN FG IGHS M K D ILEAH IP 310
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 329 P -- FT G E GHKGLY EILTT S W H A QL A L N LA M LG SL T IV VA H HMYS M P P Y PYL A I D YG TQ LS L F THH MW I G GF LIV GA A AH A 406
Cdd:CHL00054 311 P gg RL G R GHKGLY DTINN S L H F QL G L A LA S LG VI T SL VA Q HMYS L P A Y AFI A Q D FT TQ AA L Y THH QY I A GF IMT GA F AH G 390
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 407 AIF MV RDY D P TTQYN N L L D R V L R H RD AIISHL N W VCI FLGFH SF GLY I HND T M S A L G R P QDM fsdta I QLQ PIFAQWIQ N 486
Cdd:CHL00054 391 AIF FI RDY N P EQNED N V L A R M L D H KE AIISHL S W ASL FLGFH TL GLY V HND V M L A F G T P EKQ ----- I LIE PIFAQWIQ S 465
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 487 T H ASA -------- P S LTA P DAT A ST S L t W GG G D L V A VGNKVAL L PIPL G TA DFLVHH IH A FTI H V T V LIL L KG V L F AR S S 558
Cdd:CHL00054 466 A H GKT sygfdvll S S TNS P AFN A GR S I - W LP G W L N A INENSNS L FLTI G PG DFLVHH AI A LGL H T T T LIL V KG A L D AR G S 544
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 559 R L I PDK ANL G FR FPCDGPGRGGTC QV SAWD HVF L GL FWM Y N A I SV V I F HFS WK MQS d V W gsisd QG V V thitg GN F AQ SS 638
Cdd:CHL00054 545 K L M PDK KDF G YS FPCDGPGRGGTC DI SAWD AFY L AV FWM L N T I GW V T F YWH WK HIT - L W ----- QG N V ----- SQ F NE SS 613
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 639 ITIN GWLRD F LW AQA SQ V I QS Y G ---- S SLS AYGLL FL GA H F VWA FSL MFL F S G RGYWQELIE SIV WAH NKLKV A PA I Q - 713
Cdd:CHL00054 614 TYLM GWLRD Y LW LNS SQ L I NG Y N pfgm N SLS VWAWM FL FG H L VWA TGF MFL I S W RGYWQELIE TLA WAH ERTPL A NL I R w 693
730 740 750
....*....|....*....|....*....|....
gi 1847741642 714 --- P R ALSIVQ G R A VG V AH YLL G G I A T TW AF FL A 744
Cdd:CHL00054 694 rdk P V ALSIVQ A R L VG L AH FSV G Y I F T YA AF LI A 727
PsaB
COG5702 Photosystem I reaction center subunit A2, PsaB [Energy production and conversion]; Photosystem ...
32-744
0e+00
Photosystem I reaction center subunit A2, PsaB [Energy production and conversion]; Photosystem I reaction center subunit A2, PsaB is part of the Pathway/BioSystem: Photosystem I
Pssm-ID: 444412
Cd Length: 741
Bit Score: 660.03
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 32 FS KT L SKG P n TT TW IW NLH A D AHDF D SH TDDL EE - ISR K V F SA HFG Q LAIIF I W L SG MY FH G A RFS N Y E A W LS DP THIK P 110
Cdd:COG5702 8 FS QD L AQD P - TT RR IW YGI A T AHDF E SH DGMT EE n LYQ K I F AT HFG H LAIIF L W S SG NL FH V A WQG N F E Q W IQ DP LNVR P 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 111 S A QVV W - P IV G QEILNG - DVG G GFRGIQ I T - SG FFQI W RAS G ITSELQ LY CTA I GG L IF AA L MLFAGW F H YH - K AA P K LA 186
Cdd:COG5702 87 I A HAI W d P HF G KPAIEA f TQA G ASNPVN I C y SG LYHW W YTI G MRTNTD LY QGS I FL L LL AA V MLFAGW L H LQ p K FR P S LA 166
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 187 WF QDV ES M LNHHLAGL L G IG SL S W A GH Q VHV SL P INQLLDA G V D PKEIP LPH efilnrdllaqlypsf AK GL T PFFT L NW 266
Cdd:COG5702 167 WF KNA ES R LNHHLAGL F G VS SL A W T GH L VHV AI P ESRGQHV G W D NFLST LPH ---------------- PA GL A PFFT G NW 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 267 SE Y SD ------------------ F LTF R GG LN P V T GG LWLTD TV HHHLAIAV L F L IAGHMYRTN WS IGHS L KEILEAH K G 328
Cdd:COG5702 231 GV Y AQ npdtaghafgtsqgagta I LTF L GG FH P Q T ES LWLTD IA HHHLAIAV I F I IAGHMYRTN FG IGHS I KEILEAH Q G 310
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 329 P ------ F TG E GHKGLY EILTT S W H A QL A L N LA M LG SL T IV VA H HMY SM PPY PYL A I DY G TQ LS L F THH MW I G GFL IV GA 402
Cdd:COG5702 311 P grsgff K TG L GHKGLY DTINN S L H F QL G L A LA C LG VI T SL VA Q HMY AL PPY AFI A Q DY T TQ AA L Y THH QY I A GFL MI GA 390
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 403 A AH A AIF M VRDYDP TTQYN N L L D R V L R H RD AIISHL N WV CI FLGFH SF GLY I HND TMS A L G R P QDM fsdta I QLQ P I FAQ 482
Cdd:COG5702 391 F AH G AIF F VRDYDP EANKD N V L A R M L E H KE AIISHL S WV SL FLGFH TL GLY V HND VVV A F G T P EKQ ----- I LIE P V FAQ 465
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 483 W IQ NT H A ---------- S A P SLT A PD A TASTSLT W GG G D L V AV G N KVAL L PIPL G TA DFLVHH IH A FTI H V T V LIL L KG V 552
Cdd:COG5702 466 F IQ AA H G kvlygidtll S N P DSV A ST A WPNYGNV W LP G W L E AV N N GANS L FLTI G PG DFLVHH AI A LGL H T T T LIL V KG A 545
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 553 L F AR S S R L I PDK ANL G FR FPCDGPGRGGTC QV SAWD HVF L GL FWM Y N A I SV V I F HFS WK MQ S d V W GSISD Q gvvthitgg 632
Cdd:COG5702 546 L D AR G S K L M PDK KDF G YA FPCDGPGRGGTC DI SAWD SFY L AT FWM L N T I GW V T F YWH WK HL S - I W SGNVA Q --------- 615
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1847741642 633 n F AQ SS ITIN GW L RD F LWA QAS Q V I QS Y G ---- S SLS AYGLL FL GA H F VWA FSL MFL F S G RGYWQELIE SI VWAH NKLKV 708
Cdd:COG5702 616 - F NE SS TYLM GW F RD Y LWA NSA Q L I NG Y S pfgt N SLS VWAWM FL FG H L VWA TGF MFL I S W RGYWQELIE TL VWAH ERTPL 694
730 740 750 760
....*....|....*....|....*....|....*....|
gi 1847741642 709 A PAIQPR ---- ALSIVQ G R A VG VA H YLL G G I A T TW AF FL A 744
Cdd:COG5702 695 A NLVRWK dkpv ALSIVQ A R L VG LT H FTV G Y I V T YA AF LI A 734
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
