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Conserved domains on  [gi|1843783534|gb|QJW99038|]
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D-tagatose 3-epimerase [Frigoriglobus tundricola]

Protein Classification

sugar phosphate isomerase/epimerase family protein( domain architecture ID 11437618)

sugar phosphate isomerase/epimerase family protein belonging to the TIM alpha/beta barrel superfamily, similar to Bacillus subtilis inosose isomerase

CATH:  3.20.20.150
Gene Ontology:  GO:0016853|GO:0003824
PubMed:  11257493|12206759

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YcjR COG1082
Sugar phosphate isomerase/epimerase [Carbohydrate transport and metabolism];
113-366 8.63e-57

Sugar phosphate isomerase/epimerase [Carbohydrate transport and metabolism];


:

Pssm-ID: 440699 [Multi-domain]  Cd Length: 254  Bit Score: 186.76  E-value: 8.63e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 113 MKIGMNLLLWTGGVTAEhfpLLGKLKAVGFDGVELPVFGGTPADYKPIRAELDKQGLKCTTVTIltkDTNAISPDAGTRQ 192
Cdd:COG1082     1 MKLGLSTYSLPDLDLEE---ALRAAAELGYDGVELAGGDLDEADLAELRAALADHGLEISSLHA---PGLNLAPDPEVRE 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 193 KALDWLKTVIEINHVLGAETVVGpyHSAIGEFSGsGPTADEKQRAADVLRPAAEFAKSANLTMAVEYlnrFECYLLTTAA 272
Cdd:COG1082    75 AALERLKRAIDLAAELGAKVVVV--HPGSPPPPD-LPPEEAWDRLAERLRELAELAEEAGVTLALEN---HEGTFVNTPE 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 273 QAVELVKMVDHPNLRAMYDTFHAHIEEKGQAAAVRTLAPVLAHVHISEND---RGTPGTGQVDWDAAFSTLAEVGYDGWM 349
Cdd:COG1082   149 EALRLLEAVDSPNVGLLLDTGHALLAGEDPVELLRKLGDRIKHVHLKDADgdqHLPPGEGDIDFAAILRALKEAGYDGWL 228

                         250
                  ....*....|....*..
gi 1843783534 350 TIEAFGRALPDLAAATK 366
Cdd:COG1082   229 SLEVESDPDDPEEAARE 245
 
Name Accession Description Interval E-value
YcjR COG1082
Sugar phosphate isomerase/epimerase [Carbohydrate transport and metabolism];
113-366 8.63e-57

Sugar phosphate isomerase/epimerase [Carbohydrate transport and metabolism];


Pssm-ID: 440699 [Multi-domain]  Cd Length: 254  Bit Score: 186.76  E-value: 8.63e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 113 MKIGMNLLLWTGGVTAEhfpLLGKLKAVGFDGVELPVFGGTPADYKPIRAELDKQGLKCTTVTIltkDTNAISPDAGTRQ 192
Cdd:COG1082     1 MKLGLSTYSLPDLDLEE---ALRAAAELGYDGVELAGGDLDEADLAELRAALADHGLEISSLHA---PGLNLAPDPEVRE 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 193 KALDWLKTVIEINHVLGAETVVGpyHSAIGEFSGsGPTADEKQRAADVLRPAAEFAKSANLTMAVEYlnrFECYLLTTAA 272
Cdd:COG1082    75 AALERLKRAIDLAAELGAKVVVV--HPGSPPPPD-LPPEEAWDRLAERLRELAELAEEAGVTLALEN---HEGTFVNTPE 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 273 QAVELVKMVDHPNLRAMYDTFHAHIEEKGQAAAVRTLAPVLAHVHISEND---RGTPGTGQVDWDAAFSTLAEVGYDGWM 349
Cdd:COG1082   149 EALRLLEAVDSPNVGLLLDTGHALLAGEDPVELLRKLGDRIKHVHLKDADgdqHLPPGEGDIDFAAILRALKEAGYDGWL 228

                         250
                  ....*....|....*..
gi 1843783534 350 TIEAFGRALPDLAAATK 366
Cdd:COG1082   229 SLEVESDPDDPEEAARE 245
AP_endonuc_2 pfam01261
Xylose isomerase-like TIM barrel; This TIM alpha/beta barrel structure is found in xylose ...
 134-364 2.03e-46

Xylose isomerase-like TIM barrel; This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae.


Pssm-ID: 426164 [Multi-domain]  Cd Length: 248  Bit Score: 159.46  E-value: 2.03e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 134 LGKLKAVGFDGVELPVFGGTPADYKP-----IRAELDKQGLKCTTVTiLTKDTNAISPDAGTRQKALDWLKTVIEINHVL 208
Cdd:pfam01261   1 LAAAAELGFDGVELFTRRWFRPPLSDeeaeeLKAALKEHGLEIVVHA-PYLGDNLASPDEEEREKAIDRLKRAIELAAAL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 209 GAETVVGPyhsaiGEFSGSGPTADEKQRAADVLRPAAEFAKSANLTMAVEYLNRFECYLLTTAAQAVELVKMVDHPNLRA 288
Cdd:pfam01261  80 GAKLVVFH-----PGSDLGDDPEEALARLAESLRELADLAEREGVRLALEPLAGKGTNVGNTFEEALEIIDEVDSPNVGV 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 289 MYDTFHAHIEEKGQAAAVRTLAPVLAHVHISEN--------DRGTP-GTGQVDWDAAFSTLAEVGYDGWMTIEAFGRALP 359
Cdd:pfam01261 155 CLDTGHLFAAGDGDLFELRLGDRYIGHVHLKDSknplgsgpDRHVPiGEGVIDFEALFRALKEIGYDGPLSLETFNDGPP 234


                  ....*
gi 1843783534 360 DLAAA 364
Cdd:pfam01261 235 EEGAR 239
keto_glucon_epim_IolO NF041099
5-keto-L-gluconate epimerase;
136-352 1.00e-32

5-keto-L-gluconate epimerase;


Pssm-ID: 469025  Cd Length: 269  Bit Score: 124.03  E-value: 1.00e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 136 KLKAVGFDGVELPVFGGTPADYKPIRAELDKQGLkcTTVTILTKDT------NAISPDAGTRQKALDWLKTVIEINHVLG 209
Cdd:NF041099   29 KAKKLGYDAVEIAIRDPKLVDVNELKGLLYELNL--PVVAIGTGQAylaeglSLTDPDENIRKKAIERLKKHIDFASIFG 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 210 AETVvgpyhsaIGEFSGSGPTADEkQRAADV----LRPAAEFAKSANLTMAVEYLNRFECYLLTTAAQAVELVKMVDHPN 285
Cdd:NF041099  107 AKVI-------IGLIRGKKEGRAE-EEAEKLfvesMKELADYAEKKGVELVIEPLNRYETDFINTIHEALEVIRKLNRPN 178

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1843783534 286 LRAMYDTFHAHIEEKGQAAAVRTLAPVLAHVHISENDRGTPGTGQVDWDAAFSTLAEVGYDGWMTIE 352
Cdd:NF041099  179 VGILADTFHMNIEEPNIEESLRKCGDKLYHFHVADSNRWAPGYGHIDFDSIVKTLKEIGYNGAVSVE 245
PRK09856 PRK09856
fructoselysine 3-epimerase; Provisional
 113-352 3.26e-14

fructoselysine 3-epimerase; Provisional


Pssm-ID: 182116  Cd Length: 275  Bit Score: 72.18  E-value: 3.26e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 113 MKIGMnlllWTGG---VTAEHfpLLGKLKAVGFDGVELpvFGGTPADYKP---------IRAELDKQGLKcttVTILTKD 180
Cdd:PRK09856    1 MKTGM----FTCGhqrLPIEH--AFRDASELGYDGIEI--WGGRPHAFAPdlkaggikqIKALAQTYQMP---IIGYTPE 69

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 181 TNA-----ISPDAGTRQKALDWLKTVIEINHVLGAE-TVVGPYHSaigefsGSGPTADE-KQRAADVLRPAAEFAKSANL 253
Cdd:PRK09856   70 TNGypynmMLGDEHMRRESLDMIKLAMDMAKEMNAGyTLISAAHA------GYLTPPNViWGRLAENLSELCEYAENIGM 143

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 254 TMAVEYLNRFECYLLTTAAQAVELVKMVDHPNLRAMYDTFHAHIEEKGQAAAVRTLAPVLAHVHISENDRGT-----PGT 328
Cdd:PRK09856  144 DLILEPLTPYESNVVCNANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASdthyiPGE 223

                         250       260
                  ....*....|....*....|....
gi 1843783534 329 GQVDWDAAFSTLAEVGYDGWMTIE 352
Cdd:PRK09856  224 GKMPLRELMRDIIDRGYEGYCTVE 247
AP2Ec cd00019
AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester ...
 182-347 3.00e-04

AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites; the alignment also contains hexulose-6-phosphate isomerases, enzymes that catalyze the epimerization of D-arabino-6-hexulose 3-phosphate to D-fructose 6-phosphate, via cleaving the phosphoesterbond with the sugar.


Pssm-ID: 237986  Cd Length: 279  Bit Score: 42.31  E-value: 3.00e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 182 NAISPDAGTRQKALDWLKTVIEINHVLGAETVVgpYHsaIGeFSGSGPTADEKQRAADVLRPAAEFAKSANLTMAVEYLN 261
Cdd:cd00019    71 NLASPDKEKREKSIERLKDEIERCEELGIRLLV--FH--PG-SYLGQSKEEGLKRVIEALNELIDKAETKGVVIALETMA 145

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 262 RFECYLLTTAAQAVELVKMVD-HPNLRAMYDTFHAHIE------EKGQAAAVRTLAPVLA-------HVHISENDRGTP- 326
Cdd:cd00019   146 GQGNEIGSSFEELKEIIDLIKeKPRVGVCIDTCHIFAAgydistVEGFEKVLEEFDKVIGleylkaiHLNDSKGELGSGk 225

                         170       180
                  ....*....|....*....|....*..
gi 1843783534 327 ------GTGQVDWDAAFSTLAEVGYDG 347
Cdd:cd00019   226 drhepiGEGDIDGEELFKELKKDPYQN 252
 
Name Accession Description Interval E-value
YcjR COG1082
Sugar phosphate isomerase/epimerase [Carbohydrate transport and metabolism];
113-366 8.63e-57

Sugar phosphate isomerase/epimerase [Carbohydrate transport and metabolism];


Pssm-ID: 440699 [Multi-domain]  Cd Length: 254  Bit Score: 186.76  E-value: 8.63e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 113 MKIGMNLLLWTGGVTAEhfpLLGKLKAVGFDGVELPVFGGTPADYKPIRAELDKQGLKCTTVTIltkDTNAISPDAGTRQ 192
Cdd:COG1082     1 MKLGLSTYSLPDLDLEE---ALRAAAELGYDGVELAGGDLDEADLAELRAALADHGLEISSLHA---PGLNLAPDPEVRE 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 193 KALDWLKTVIEINHVLGAETVVGpyHSAIGEFSGsGPTADEKQRAADVLRPAAEFAKSANLTMAVEYlnrFECYLLTTAA 272
Cdd:COG1082    75 AALERLKRAIDLAAELGAKVVVV--HPGSPPPPD-LPPEEAWDRLAERLRELAELAEEAGVTLALEN---HEGTFVNTPE 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 273 QAVELVKMVDHPNLRAMYDTFHAHIEEKGQAAAVRTLAPVLAHVHISEND---RGTPGTGQVDWDAAFSTLAEVGYDGWM 349
Cdd:COG1082   149 EALRLLEAVDSPNVGLLLDTGHALLAGEDPVELLRKLGDRIKHVHLKDADgdqHLPPGEGDIDFAAILRALKEAGYDGWL 228

                         250
                  ....*....|....*..
gi 1843783534 350 TIEAFGRALPDLAAATK 366
Cdd:COG1082   229 SLEVESDPDDPEEAARE 245
AP_endonuc_2 pfam01261
Xylose isomerase-like TIM barrel; This TIM alpha/beta barrel structure is found in xylose ...
 134-364 2.03e-46

Xylose isomerase-like TIM barrel; This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae.


Pssm-ID: 426164 [Multi-domain]  Cd Length: 248  Bit Score: 159.46  E-value: 2.03e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 134 LGKLKAVGFDGVELPVFGGTPADYKP-----IRAELDKQGLKCTTVTiLTKDTNAISPDAGTRQKALDWLKTVIEINHVL 208
Cdd:pfam01261   1 LAAAAELGFDGVELFTRRWFRPPLSDeeaeeLKAALKEHGLEIVVHA-PYLGDNLASPDEEEREKAIDRLKRAIELAAAL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 209 GAETVVGPyhsaiGEFSGSGPTADEKQRAADVLRPAAEFAKSANLTMAVEYLNRFECYLLTTAAQAVELVKMVDHPNLRA 288
Cdd:pfam01261  80 GAKLVVFH-----PGSDLGDDPEEALARLAESLRELADLAEREGVRLALEPLAGKGTNVGNTFEEALEIIDEVDSPNVGV 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 289 MYDTFHAHIEEKGQAAAVRTLAPVLAHVHISEN--------DRGTP-GTGQVDWDAAFSTLAEVGYDGWMTIEAFGRALP 359
Cdd:pfam01261 155 CLDTGHLFAAGDGDLFELRLGDRYIGHVHLKDSknplgsgpDRHVPiGEGVIDFEALFRALKEIGYDGPLSLETFNDGPP 234


                  ....*
gi 1843783534 360 DLAAA 364
Cdd:pfam01261 235 EEGAR 239
Hyi COG3622
Hydroxypyruvate/dehydroerythronate isomerase, Hyi/OtnI family [Carbohydrate transport and ...
 138-349 6.44e-33

Hydroxypyruvate/dehydroerythronate isomerase, Hyi/OtnI family [Carbohydrate transport and metabolism];


Pssm-ID: 442840  Cd Length: 260  Bit Score: 124.06  E-value: 6.44e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 138 KAVGFDGVELpVFggtPADYKP--IRAELDKQGLKCTTVTILTKDTNA----ISPDAGTRQKALDWLKTVIEINHVLGAE 211
Cdd:COG3622    25 AAAGFDAVEF-LF---PYDRPAeeIAAALKKHGLTLVLFNLPAGDWAAgergLAALPGREAEFRAGVDRALEYAAALGCK 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 212 TVVGpyhsaigeFSGSGPT--ADEKQRA--ADVLRPAAEFAKSANLTMAVEYLNRFEC--YLLTTAAQAVELVKMVDHPN 285
Cdd:COG3622   101 NLHV--------MAGNRPRglDDEAALAtfVENLRYAADLAAPHGITLLIEPLNSRDHpgYFLDTTAQAVAIIEAVGSPN 172

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1843783534 286 LRAMYDTFHAHIEEKGQAAAVRTLAPVLAHVHISEN-DRGTPGTGQVDWDAAFSTLAEVGYDGWM 349
Cdd:COG3622   173 LKLLYDIYHMQIMEGDLIRTIRRHLPRIGHVQIADVpGRHEPGTGELNYPAIFKALDALGYDGWV 237
keto_glucon_epim_IolO NF041099
5-keto-L-gluconate epimerase;
136-352 1.00e-32

5-keto-L-gluconate epimerase;


Pssm-ID: 469025  Cd Length: 269  Bit Score: 124.03  E-value: 1.00e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 136 KLKAVGFDGVELPVFGGTPADYKPIRAELDKQGLkcTTVTILTKDT------NAISPDAGTRQKALDWLKTVIEINHVLG 209
Cdd:NF041099   29 KAKKLGYDAVEIAIRDPKLVDVNELKGLLYELNL--PVVAIGTGQAylaeglSLTDPDENIRKKAIERLKKHIDFASIFG 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 210 AETVvgpyhsaIGEFSGSGPTADEkQRAADV----LRPAAEFAKSANLTMAVEYLNRFECYLLTTAAQAVELVKMVDHPN 285
Cdd:NF041099  107 AKVI-------IGLIRGKKEGRAE-EEAEKLfvesMKELADYAEKKGVELVIEPLNRYETDFINTIHEALEVIRKLNRPN 178

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1843783534 286 LRAMYDTFHAHIEEKGQAAAVRTLAPVLAHVHISENDRGTPGTGQVDWDAAFSTLAEVGYDGWMTIE 352
Cdd:NF041099  179 VGILADTFHMNIEEPNIEESLRKCGDKLYHFHVADSNRWAPGYGHIDFDSIVKTLKEIGYNGAVSVE 245
PRK09856 PRK09856
fructoselysine 3-epimerase; Provisional
 113-352 3.26e-14

fructoselysine 3-epimerase; Provisional


Pssm-ID: 182116  Cd Length: 275  Bit Score: 72.18  E-value: 3.26e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 113 MKIGMnlllWTGG---VTAEHfpLLGKLKAVGFDGVELpvFGGTPADYKP---------IRAELDKQGLKcttVTILTKD 180
Cdd:PRK09856    1 MKTGM----FTCGhqrLPIEH--AFRDASELGYDGIEI--WGGRPHAFAPdlkaggikqIKALAQTYQMP---IIGYTPE 69

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 181 TNA-----ISPDAGTRQKALDWLKTVIEINHVLGAE-TVVGPYHSaigefsGSGPTADE-KQRAADVLRPAAEFAKSANL 253
Cdd:PRK09856   70 TNGypynmMLGDEHMRRESLDMIKLAMDMAKEMNAGyTLISAAHA------GYLTPPNViWGRLAENLSELCEYAENIGM 143

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 254 TMAVEYLNRFECYLLTTAAQAVELVKMVDHPNLRAMYDTFHAHIEEKGQAAAVRTLAPVLAHVHISENDRGT-----PGT 328
Cdd:PRK09856  144 DLILEPLTPYESNVVCNANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASdthyiPGE 223

                         250       260
                  ....*....|....*....|....
gi 1843783534 329 GQVDWDAAFSTLAEVGYDGWMTIE 352
Cdd:PRK09856  224 GKMPLRELMRDIIDRGYEGYCTVE 247
PRK09997 PRK09997
hydroxypyruvate isomerase; Provisional
 136-352 1.26e-13

hydroxypyruvate isomerase; Provisional


Pssm-ID: 182188  Cd Length: 258  Bit Score: 70.37  E-value: 1.26e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 136 KLKAVGFDGVELpVFggtPADYKP--IRAELDKQGLKCTTVTILTKDTNA----ISPDAGTRQKALDWLKTVIEINHVLG 209
Cdd:PRK09997   23 KAAQCGFRGVEF-MF---PYDYDIeeLKQVLASNKLEHTLHNLPAGDWAAgergIACIPGREEEFRDGVAAAIRYARALG 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 210 aetvvgpyHSAIGEFSGSGPT--ADEKQRAADV--LRPAAEFAKSANLTMAVEYLNRFEC--YLLTTAAQAVELVKMVDH 283
Cdd:PRK09997   99 --------NKKINCLVGKTPAgfSSEQIHATLVenLRYAANMLMKEDILLLIEPINHFDIpgFHLTGTRQALKLIDDVGC 170

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 284 PNLRAMYDTFHAHIEEKGQAAAVRTLAPVLAHVHISEN-DRGTPGTGQVDWDAAFSTLAEVGYDGWMTIE 352
Cdd:PRK09997  171 CNLKIQYDIYHMQRMEGELTNTMTQWADKIGHLQIADNpHRGEPGTGEINYDYLFKVIENSDYNGWVGCE 240
PRK09989 PRK09989
HPr family phosphocarrier protein;
138-352 4.32e-12

HPr family phosphocarrier protein;


Pssm-ID: 182185  Cd Length: 258  Bit Score: 65.83  E-value: 4.32e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 138 KAVGFDGVELpVFggtPADYKP--IRAELDKQGLKCTTVTILTKDTNA----ISPDAGTRQKALDWLKTVIEINHVLGAE 211
Cdd:PRK09989   25 RKAGFDAVEF-LF---PYDYSTlqIQKQLEQNHLTLALFNTAPGDINAgewgLSALPGREHEARADIDLALEYALALNCE 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 212 TVvgpyHSAIGEFSGSGPTADEKQRAADVLRPAAEFAKSANLTMAVEYLNR--FECYLLTTAAQAVELVKMVDHPNLRAM 289
Cdd:PRK09989  101 QV----HVMAGVVPAGEDAERYRAVFIDNLRYAADRFAPHGKRILVEALSPgvKPHYLFSSQYQALAIVEEVARDNVFIQ 176

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1843783534 290 YDTFHAHIEEKGQAAAVRTLAPVLAHVHI-SENDRGTPGTGQVDWDAAFSTLAEVGYDGWMTIE 352
Cdd:PRK09989  177 LDTFHAQKVDGNLTHLIRDYAGKYAHVQIaGLPDRHEPDDGEINYPWLFRLFDEVGYQGWIGCE 240
SgaU COG3623
L-ribulose-5-phosphate 3-epimerase UlaE [Carbohydrate transport and metabolism];
185-352 3.02e-11

L-ribulose-5-phosphate 3-epimerase UlaE [Carbohydrate transport and metabolism];


Pssm-ID: 442841  Cd Length: 277  Bit Score: 63.33  E-value: 3.02e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 185 SPDAGTRQKALDWLKTVIEINHVLGAETV-VGPYHSAIGEfsgsgPTADEKQRAADVLRPAAEFAKSANLTMAVEYLnrf 263
Cdd:COG3623    81 SADPAVRERALEIMEKAIDLASDLGIRTIqLAGYDVYYEP-----SDEETRQRFIEGLKKAVELAARAGVMLAIEIM--- 152

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 264 ECYLLTTAAQAVELVKMVDHPNLRAMYDT-----FHAHIEEKGQAAAVRTLApvlahVHISENDRGTP-----GTGQVDW 333
Cdd:COG3623   153 DTPFMNSISKAMELVKEIDSPWLQVYPDIgnlsaWGNDVADELELGIGHIVA-----IHLKDTLPGQFrdvpfGEGCVDF 227

                         170
                  ....*....|....*....
gi 1843783534 334 DAAFSTLAEVGYDGWMTIE 352
Cdd:COG3623   228 VAAFKTLKRLGYRGPFLIE 246
PRK13209 PRK13209
L-ribulose-5-phosphate 3-epimerase;
128-372 1.50e-09

L-ribulose-5-phosphate 3-epimerase;


Pssm-ID: 237307  Cd Length: 283  Bit Score: 58.46  E-value: 1.50e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 128 AEHFPLLGKL---KAVGFDGVELPV---------FGGTPADYKPIRAELDKQGLKCTTVTI-LTKDTNAISPDAGTRQKA 194
Cdd:PRK13209   18 PAGECWLEKLaiaKTAGFDFVEMSVdesderlarLDWSREQRLALVNALVETGFRVNSMCLsAHRRFPLGSEDDAVRAQA 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 195 LDWLKTVIEINHVLGAETV-VGPYHSAIGEfsgsgPTADEKQRAADVLRPAAEFAKSANLTMAVEYLNRFecyLLTTAAQ 273
Cdd:PRK13209   98 LEIMRKAIQLAQDLGIRVIqLAGYDVYYEQ-----ANNETRRRFIDGLKESVELASRASVTLAFEIMDTP---FMNSISK 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 274 AVELVKMVDHPNLRAMYD-----TFHAHIEEKGQAAAVRTLApvlahVHISENDRGTP-----GTGQVDWDAAFSTLAEV 343
Cdd:PRK13209  170 ALGYAHYLNSPWFQLYPDignlsAWDNDVQMELQAGIGHIVA-----FHVKDTKPGVFknvpfGEGVVDFERCFKTLKQS 244

                         250       260
                  ....*....|....*....|....*....
gi 1843783534 344 GYDGWMTIEAFGRALPDLAAATKVWRDLF 372
Cdd:PRK13209  245 GYCGPYLIEMWSETAEDPAAEVAKARDFV 273
PRK13210 PRK13210
L-ribulose-5-phosphate 3-epimerase;
185-352 1.34e-08

L-ribulose-5-phosphate 3-epimerase;


Pssm-ID: 237308  Cd Length: 284  Bit Score: 55.68  E-value: 1.34e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 185 SPDAGTRQKALDWLKTVIEINHVLGAETV-VGPYHSAIGEfsgsgPTADEKQRAADVLRPAAEFAKSANLTMAVE----- 258
Cdd:PRK13210   83 SRDPATRERALEIMKKAIRLAQDLGIRTIqLAGYDVYYEE-----KSEETRQRFIEGLAWAVEQAAAAQVMLAVEimdtp 157

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 259 YLNrfecylltTAAQAVELVKMVDHP---------NLRAMYDTF-------HAHIeekgqaAAVR---TLApvlahvhIS 319
Cdd:PRK13210  158 FMN--------SISKWKKWDKEIDSPwltvypdvgNLSAWGNDVwselklgIDHI------AAIHlkdTYA-------VT 216

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1843783534 320 ENDRG-----TPGTGQVDWDAAFSTLAEVGYDGWMTIE 352
Cdd:PRK13210  217 ETSKGqfrdvPFGEGCVDFVGIFKTLKELNYRGPFLIE 254
AP2Ec cd00019
AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester ...
 182-347 3.00e-04

AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites; the alignment also contains hexulose-6-phosphate isomerases, enzymes that catalyze the epimerization of D-arabino-6-hexulose 3-phosphate to D-fructose 6-phosphate, via cleaving the phosphoesterbond with the sugar.


Pssm-ID: 237986  Cd Length: 279  Bit Score: 42.31  E-value: 3.00e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 182 NAISPDAGTRQKALDWLKTVIEINHVLGAETVVgpYHsaIGeFSGSGPTADEKQRAADVLRPAAEFAKSANLTMAVEYLN 261
Cdd:cd00019    71 NLASPDKEKREKSIERLKDEIERCEELGIRLLV--FH--PG-SYLGQSKEEGLKRVIEALNELIDKAETKGVVIALETMA 145

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1843783534 262 RFECYLLTTAAQAVELVKMVD-HPNLRAMYDTFHAHIE------EKGQAAAVRTLAPVLA-------HVHISENDRGTP- 326
Cdd:cd00019   146 GQGNEIGSSFEELKEIIDLIKeKPRVGVCIDTCHIFAAgydistVEGFEKVLEEFDKVIGleylkaiHLNDSKGELGSGk 225

                         170       180
                  ....*....|....*....|....*..
gi 1843783534 327 ------GTGQVDWDAAFSTLAEVGYDG 347
Cdd:cd00019   226 drhepiGEGDIDGEELFKELKKDPYQN 252
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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