homeobox protein luminidependens, partial [Sphaerocardamum nesliiforme]
Protein Classification
TFIIS N-terminal domain-containing protein( domain architecture ID 2257)
TFIIS (transcription elongation factor S-II) N-terminal domain-containing protein contains structural motifs that are responsible for interacting with RNA polymerase II (RNAPII) and mediating its catalytic activities
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| TFIIS_I super family | cl00146 | N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a ... |
41-101 | 8.18e-03 | ||
N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme The actual alignment was detected with superfamily member smart00509: Pssm-ID: 469629 [Multi-domain] Cd Length: 75 Bit Score: 33.05 E-value: 8.18e-03
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| Name | Accession | Description | Interval | E-value | ||
| TFS2N | smart00509 | Domain in the N-terminus of transcription elongation factor S-II (and elsewhere); |
41-101 | 8.18e-03 | ||
Domain in the N-terminus of transcription elongation factor S-II (and elsewhere); Pssm-ID: 197766 [Multi-domain] Cd Length: 75 Bit Score: 33.05 E-value: 8.18e-03
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| Name | Accession | Description | Interval | E-value | ||
| TFS2N | smart00509 | Domain in the N-terminus of transcription elongation factor S-II (and elsewhere); |
41-101 | 8.18e-03 | ||
Domain in the N-terminus of transcription elongation factor S-II (and elsewhere); Pssm-ID: 197766 [Multi-domain] Cd Length: 75 Bit Score: 33.05 E-value: 8.18e-03
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| Blast search parameters | ||||
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