|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
5-541 |
9.10e-166 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 483.10 E-value: 9.10e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 5 LFFTVSQALLLLAILSGGVGFIF-MSGGELALEWEAFSAFGQKMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDM 83
Cdd:MTH00165 3 MCLISFFFLFFLSLILFFLGLYFlLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 84 FNPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTALTNRIGDVAILLCISLWVSCG 163
Cdd:MTH00165 83 NINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 164 IFNYGLVSSASVNVLSSALT--LVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLSGW 241
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEMLLIglLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 242 SSWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHTVKDY 321
Cdd:MTH00165 243 SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 322 QDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVSMIATGLTVVYSCRLTLGIFNL 401
Cdd:MTH00165 323 QDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 402 FSGRESYSAEGDSDFFMLGGMSILMGPAIMGGWWLSGLM-PSSLIIFMPLWQKLTVLILVLVSGALALSGVGVSERPNNI 480
Cdd:MTH00165 403 DFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIfPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLK 482
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1829764509 481 P------SKFFHQMWFMPITFSIGLTNGGLSYGKSNSLNVDETWLTFSTWQGIFKPNYKIYYLLASF 541
Cdd:MTH00165 483 SlknyklSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWL 549
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
2-529 |
3.52e-153 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 450.45 E-value: 3.52e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 2 NSLLFFTVSqallllAILSGGVGFIFMSGGELALEWEAFSAFGQKMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGG 81
Cdd:MTH00151 7 SSFLLFSYS------VFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 82 DMFNPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTALTNRIGDVAILLCISLWVS 161
Cdd:MTH00151 81 DPFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 162 CGIFNYGLVSSASVNVLSSalTLVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRM-NYLILLSG 240
Cdd:MTH00151 161 LGHWSILSMWDFKLSGWLG--LLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFfPFLSSSSG 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 241 WSSWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHTVKD 320
Cdd:MTH00151 239 FSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSG 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 321 YQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVSMIATGLTVVYSCRLTLGIFN 400
Cdd:MTH00151 319 TQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVW 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 401 LFSGRESYSAEGDSDFFMLGGMSILMGPAIMGGWWLSGLMPS-SLIIFMPLWQKLTVLILVLVS--GALALSGVGVSERP 477
Cdd:MTH00151 399 GSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGfSEEFFLPSYLKLLIGFVILLGlfLSFGFWDSGFSSSK 478
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 1829764509 478 NNIPSKFFHQMWFMPITFSIGLTNGGLSYGKSNSLNVDETWLTFSTWQGIFK 529
Cdd:MTH00151 479 MVKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFK 530
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
13-559 |
9.09e-130 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 390.55 E-value: 9.09e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 13 LLLLAILSGGVGFIFMSGGELA-LEWEAFSAFGQKMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAAL 91
Cdd:MTH00209 9 LMLLFLFSFLMFVIFMWFQKIViLEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 92 VFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTALTNRIGDVAILLCISLWVSCGIFNYgLVS 171
Cdd:MTH00209 89 VLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWNI-FYL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 172 SASVNVLSSALTLVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRM-NYLILLSGWSSWLLALGL 250
Cdd:MTH00209 168 NFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFfPSLFSSPFFSMSLLLLGS 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 251 FTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHTVKDYQDLRKMGGS 330
Cdd:MTH00209 248 LTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNL 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 331 LINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVSMIATGLTVVYSCRLTLGIFNLFSGRESYSA 410
Cdd:MTH00209 328 WYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNS 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 411 EGDSDFFMLGGMSILMGPAIMGGWWLSGLM-PSSLIIFMPLWQKLTVLILVLVSGALALSGVGVSERP-NNIPSKFFH-Q 487
Cdd:MTH00209 408 SFDQNKLNLKPMLVLTLGSITGGSVMSWVMvPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLiKGYKVNYFLsQ 487
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1829764509 488 MWFMPITFSIGLTNGGLSYGKSNSLNVDETWLTFSTWQGIFKPNYKIYYLLASFRGGALVSLALIGGLSLIV 559
Cdd:MTH00209 488 MWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLG 559
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
33-559 |
1.48e-122 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 372.18 E-value: 1.48e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 33 LALEWEAFSAFGQKMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAALVFMFILSMALMILSPNLISLL 112
Cdd:MTH00207 35 ILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILL 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 113 LGWDGLGVTSYLLVCYYMSEKSFNASMLTALTNRIGDVAILLCISLWVSCGIFNyglVSSASVNVLSSALTLVI-IAAMT 191
Cdd:MTH00207 115 LGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWS---ITNMWQTDMNNYIALSImIAAMT 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 192 KSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRM-NYLILLSGWSSWLLALGLFTMTMAGAAAIFELDMKKVI 270
Cdd:MTH00207 192 KSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFyPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKII 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 271 ALSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHTVKDYQDLRKMGGSLINLPALATVCLVSNLSLCG 350
Cdd:MTH00207 272 ALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCG 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 351 MPFLSGFYSKDLILESLFVQGPSLVVFVVSMIATGLTVVYSCRLTLGIFNLFSGRESYSAEGDSDFFMLGGMSILMGPAI 430
Cdd:MTH00207 352 SPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAI 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 431 MGG----WWlsgLMPSSLIIFMPLWQKLTVLILVLVSGALALSGVGVSER------PNNIPSKFFHQMWFMPITFSIGLT 500
Cdd:MTH00207 432 TSGsalnWW---LPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITktplliNNPLSHFASCLMWFLVPLSSQFIM 508
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 1829764509 501 NGGLSYGKSNSLNVDETWLTFSTWQGIFKPNYKIYYLLASFRGGALVSLALIGGLSLIV 559
Cdd:MTH00207 509 STPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMMSFVLLTI 567
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-559 |
2.31e-109 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 339.23 E-value: 2.31e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 1 MNSLLFFTVSQALLLLAILSGGVGFIFMSGGELALEWEAFSAFGQKMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMG 80
Cdd:MTH00211 25 NNSKLHIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMS 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 81 GDMFNPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTALT-NRIGDVAILLCIsLW 159
Cdd:MTH00211 105 SEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIyNRIGDIGLLLSM-VW 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 160 VSCGIFNYGLVSSASVNVLSSALTL-VIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILL 238
Cdd:MTH00211 184 LLLNLNSWEISQLFILNLDLTLFLLgLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQN 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 239 SGWS-SWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHT 317
Cdd:MTH00211 264 NQLIlGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHG 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 318 VKDYQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVSMIATGLTVVYSCRLTLG 397
Cdd:MTH00211 344 LNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFL 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 398 IFNLFSGRESYSAEGDSDFFMLGGMSILMGPAIMGGWWLSGLMPS--SLIIFMPLWQKLTVLILVLVSGALALSGVGVSE 475
Cdd:MTH00211 424 SLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPekPEILSLPFLLKLMPLLVTIVGLLLGLELVNLTH 503
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 476 RPNNIPSKFFH-QMWFMPITFSIGLTNGGLSYGKSNSLNV-DETWLTFSTWQGIFKPNYKIYYLLASFRGGALVSLALIG 553
Cdd:MTH00211 504 KQLKTSTLSFSnMLGYYPPIIHRLLPKLSLKWGQTLSTHLmDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALL 583
|
....*.
gi 1829764509 554 GLSLIV 559
Cdd:MTH00211 584 LLSLLL 589
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
12-473 |
1.14e-101 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 319.41 E-value: 1.14e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 12 ALLLLAILSGGVGFIFMSGGELALEWEAFSAFGQKMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAAL 91
Cdd:COG1009 37 APLAAFVLSLLLFPAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAY 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 92 VFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTA-LTNRIGDVAILLCIS-LWVSCGIFNYGL 169
Cdd:COG1009 117 LLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILlLGAIAGTLNFSE 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 170 VSSASVNVLSSALT-----LVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLSGWSSW 244
Cdd:COG1009 197 LLAAAPTILSSPLLtlillLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLT 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 245 LLA-LGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHTVKDyQD 323
Cdd:COG1009 277 VVAiIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGT-RD 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 324 LRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQG-PSLVVFVVSMIATGLTVVYSCRLTLGIFNLF 402
Cdd:COG1009 356 IRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGgLGPLLLAVALLGAFLTAFYSFRLFFLVFFGK 435
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1829764509 403 SGRESYSAEGDSDFFMLGGMSILMGPAIMGGWWLSGLMPSSLI---IFMPLWQKLTVLILVLVSGALALSGVGV 473
Cdd:COG1009 436 PRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLLEGLLApaaVLGGELHLAHGLLLNALPLLLSLLGIAL 509
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
37-467 |
4.41e-90 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 289.18 E-value: 4.41e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 37 WEAFSAFGQKMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAALVFMFILSMALMILSPNLISLLLGWD 116
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 117 GLGVTSYLLVCYYMSEKSFNASMLTA-LTNRIGDVAILLCI-SLWVSCGIFNYGLVSSASVNVLSSALT----LVIIAAM 190
Cdd:TIGR01974 145 GVGLCSYLLIGFWYKKPSANNAAIKAfVVNRVGDFGLLLGIfLIFWYFGTLNFQEVFALAPGAFFSALTliclLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 191 TKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLS-GWSSWLLALGLFTMTMAGAAAIFELDMKKV 269
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSpTALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 270 IALSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHTVKDYQDLRKMGGSLINLPALATVCLVSNLSLC 349
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 350 GMPFLSGFYSKDLILESLFVQGPSLVVFVVSMIATGLTVVYSCRLTLGIFNLFSGRESYSAEGDSDFFMLGGMSILMGPA 429
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1829764509 430 IMGGWWLSGLM------------PSSLIIFMPLWQKLTVLILVLVSGALA 467
Cdd:TIGR01974 465 VFAGFFIVPLFeflkgvlptsaePALEHHHVPALEIWSPTAVAILGILLA 514
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
13-541 |
5.70e-88 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 284.17 E-value: 5.70e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 13 LLLLAILSGGVGFIFMSGGELAL-----EWeaFSAFGQKMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPR 87
Cdd:MTH00208 62 LKTLAFLSLINLLIWILLGCPNInislsNW--LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 88 FAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTA-LTNRIGDVAILLCISLWV----SC 162
Cdd:MTH00208 140 FFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLSLinfnSW 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 163 GIFNYGLVSSASVNVLSSALTLVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLSGW- 241
Cdd:MTH00208 220 NLNEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWf 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 242 SSWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHTVKDY 321
Cdd:MTH00208 300 LSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNE 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 322 QDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVSMIATGLTVVYSCRLTLGIFNL 401
Cdd:MTH00208 380 QDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLN 459
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 402 FSGRESYSAEGDSDFFMLGGMSILMGPAIMGGWWLSGLMPSSLIIFMPLWQKLTVLILVLVsGALALSGVGVSERPNNIP 481
Cdd:MTH00208 460 NPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLPPLTLPLILKSLPLIVTII-GAAFSFSFLLSLSSNPIN 538
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1829764509 482 SKFFH----QMWFMPITFSIGLTNGGLSYGKSNSLNVDETWLTFSTWQGIFKPNYKI-------------YYLLASF 541
Cdd:MTH00208 539 SNFFSflsnQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLsksyqltqtgyikQYLLSST 615
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
12-467 |
8.50e-87 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 280.89 E-value: 8.50e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 12 ALLLLAILSGGVGFIFMSGGELALE---WEAFSAFGQKMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRF 88
Cdd:PRK06590 38 LVGLSALLSLVVFFDFLLGGGRAFSqtlWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRF 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 89 AALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTA-LTNRIGDVAILLCI-SLWVSCGIFN 166
Cdd:PRK06590 118 FAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAfIVNRVGDVGLALGIfLLFAEFGSLN 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 167 YGLVSSASVNVL---SSALTLV----IIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLS 239
Cdd:PRK06590 198 YDEVFAAAPQFFglgWSALTLIclllFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELS 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 240 -GWSSWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHTV 318
Cdd:PRK06590 278 pEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 319 KDYQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGpSLVVFVVSMIATGLTVVYSCRLtlgI 398
Cdd:PRK06590 358 HHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANG-HINLFVAGLVGAFLTAFYSFRL---I 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 399 FNLFSG--RESYSAEGDSDFFMLGGMSILMGPAIMGGWWLSGLMPSSLIIFM-----------PLWQKLTVLILVLVSGA 465
Cdd:PRK06590 434 FLVFHGkeKEKIHHPHESPAVMTLPLIVLAVLSVFAGALIVPPFLGVLPLTTelahgeaehhlPVWVALLPLVVALAGIA 513
|
..
gi 1829764509 466 LA 467
Cdd:PRK06590 514 LA 515
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
35-396 |
7.02e-79 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 259.71 E-value: 7.02e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 35 LEWEAFSAFgqKMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAALVFMFILSMALMILSPNLISLLLG 114
Cdd:MTH00004 66 WPWIFTTTF--NIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIG 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 115 WDGLGVTSYLLVCYYMSEKSFNASMLTALT-NRIGDVAILLCISlWVSCGIFNYGLVSSASVNVLSSALTL-VIIAAMTK 192
Cdd:MTH00004 144 WEGVGIMSFLLIGWWSGRAEANTAALQAIIyNRIGDIGLILSMA-WLAMTLNTWEIQQLFSPTQTPTLPLLgLILAATGK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 193 SAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLSGWSSWL-LALGLFTMTMAGAAAIFELDMKKVIA 271
Cdd:MTH00004 223 SAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTIcLCLGALTTLFAATCALTQNDIKKIIA 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 272 LSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHTVKDYQDLRKMGGSLINLPALATVCLVSNLSLCGM 351
Cdd:MTH00004 303 FSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGT 382
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1829764509 352 PFLSGFYSKDLILESLFVQGPSLVVFVVSMIATGLTVVYSCRLTL 396
Cdd:MTH00004 383 PFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMIL 427
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
25-528 |
2.21e-74 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 247.51 E-value: 2.21e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 25 FIFMSGG--ELALEWEAFSAFGQKMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAALVFMFILSMALM 102
Cdd:MTH00066 50 MIFINQGleSITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMIL 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 103 ILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTA-LTNRIGDVAILLCISlWVScgiFNYGLVSSASVNVLSSA 181
Cdd:MTH00066 130 VTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAvLYNRVGDIGLILSMA-WLA---MNTNSWELQQIFLLNDN 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 182 LTL----VIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRM------NYLILlsgwsSWLLALGLF 251
Cdd:MTH00066 206 STLpllgLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFhpllenNQTAL-----TICLCLGAL 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 252 TMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHTVKDYQDLRKMGGSL 331
Cdd:MTH00066 281 TTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQ 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 332 INLPaLATVCL-VSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVSMIATGLTVVYSCRLTLGIFNLFSGRESYSA 410
Cdd:MTH00066 361 KALP-ITTSCLtIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSP 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 411 EGDSDFFMLGGM------SILMGPAIMggwwlSGLMPSSLIIF-MPLWQKLTVLILVLVSGALALSGVGVSERPNNIP-- 481
Cdd:MTH00066 440 INENNPLIINPIkrlawgSIIAGLLII-----FNILPMKPQILtMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTkm 514
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 1829764509 482 SKFFHQMWFMPITFSIGLTNGGLSYGKSNSLN-VDETWLTFSTWQGIF 528
Cdd:MTH00066 515 HSFSNLLAFFPTIIHRLSPKTNLNSGQNIATHlTDMTWYEKSGPKGLT 562
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
51-468 |
4.19e-72 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 241.90 E-value: 4.19e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 51 LLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYM 130
Cdd:MTH00020 76 LQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 131 SEKSFNASMLTA-LTNRIGDVAILLCI-SLWVSCGIFNYGLVSSASVNVLSSALTL----VIIAAMTKSAQIPFSAWLPA 204
Cdd:MTH00020 156 TRIEANKAAIKAmLVNRVGDIGLLLAMfLLWDRFGSLDFSSVFNMVVSAPSSDITLiclfLFIGAVGKSAQLGLHTWLPD 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 205 AMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLSGWSSWLLAL-GLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFF 283
Cdd:MTH00020 236 AMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIvGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 284 SLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHTVKDYQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLI 363
Cdd:MTH00020 316 ACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLI 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 364 LESLFVQGPSLVVFVVSMIATGLTVVYSCRLTLGIF--NLFSGRESYSAEGDSDFFMLGGMSILMGPAIMGGWWLSGLMP 441
Cdd:MTH00020 396 LELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFlsNTNLKKAVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIW 475
|
410 420 430
....*....|....*....|....*....|
gi 1829764509 442 SSLIIF---MPLWQKLTVLILVLVSGALAL 468
Cdd:MTH00020 476 SFQITLppiVPLSIKLLPVFLSLGGIGLVI 505
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
46-468 |
1.91e-71 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 239.75 E-value: 1.91e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 46 KMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLL 125
Cdd:MTH00108 75 KLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLL 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 126 VCYYMSEKSFNASMLTA-LTNRIGDVAILL-----CISL--WVSCGIFnyglvsSASVNVLSSALTLVIIAAMTKSAQIP 197
Cdd:MTH00108 155 IGWWYGRTDANTAALQAiLYNRIGDIGFILamawfLLNLnsWDLQQIF------MLNPNNSNLPLMGLLLAATGKSAQFG 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 198 FSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRM------NYLILlsgwsSWLLALGLFTMTMAGAAAIFELDMKKVIA 271
Cdd:MTH00108 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFhplmenNKTIQ-----TLTLCLGAITTLFTAICALTQNDIKKIVA 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 272 LSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHTVKDYQDLRKMGGSLINLPALATVCLVSNLSLCGM 351
Cdd:MTH00108 304 FSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGM 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 352 PFLSGFYSKDLILESLFVQGPSLVVFVVSMIATGLTVVYSCRLtlgIFNLFSGRESYSAE---GDSDFFMLGGMSILMGP 428
Cdd:MTH00108 384 PFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRI---IFFALLGQPRFPPLitiNENNPLLINPIKRLLLG 460
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1829764509 429 AIMGGWWLSGLMPSSLII--FMPLWQKLTVLILVLVSGALAL 468
Cdd:MTH00108 461 SIFAGFLISNNIPPTTIPqmTMPLYLKLTALAVTILGFILAL 502
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
1-403 |
2.34e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 227.11 E-value: 2.34e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 1 MNSLLFFTVSQALLLLAILsggVGFIFMSGGELALEWEAFSafgqkmtLLLLFDFISLIFLSTVCLISGCVFFYSVSYMG 80
Cdd:MTH00095 1 MNILIFLILFFFFFLLLFI---LFLPFMKLNLFFLEWDFLS-------LKFNFYFNSLLFSLILLLVTLSVLVFSSYYMN 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 81 GDMFNPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTALTNRIGDVAILLCISlwv 160
Cdd:MTH00095 71 GELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFS--- 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 161 scGIFNYGLVSSASVNVLSSALTLVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLSG 240
Cdd:MTH00095 148 --GFIFSSYYFFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMN 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 241 WSSWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHTVKD 320
Cdd:MTH00095 226 VMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFG 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 321 YQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVSMIATGLTVVYSCRLTLGIFN 400
Cdd:MTH00095 306 QQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFL 385
|
...
gi 1829764509 401 LFS 403
Cdd:MTH00095 386 SFS 388
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
51-493 |
1.02e-65 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 224.89 E-value: 1.02e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 51 LLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYM 130
Cdd:MTH00210 76 LQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 131 SE-KSFNASMLTALTNRIGDVAILLC-ISLWVSCGIFNYGLVSSA-SVNVLSSALT----LVIIAAMTKSAQIPFSAWLP 203
Cdd:MTH00210 156 TRiKANKAAIKAMLINRVGDIGLVLAmIMILKEFGTLEFSTISSLlVTNINKESLTiiclLLFIGAVGKSAQLGLHTWLP 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 204 AAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLSGWSSWLLA-LGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMF 282
Cdd:MTH00210 236 DAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTiLGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 283 FSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHTVKDYQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDL 362
Cdd:MTH00210 316 MVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDL 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 363 ILESLFVQGPSLVVFVVSMIATGLTVVYSCRLTLGIF--NLFSGRESYSAEGDSDFFMLGGMSILMGPAIMGGWWLSGLM 440
Cdd:MTH00210 396 ILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFitNTNSKKEVFIGVHESSWNITFPLLLLAFGSIFVGYLGKEVV 475
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1829764509 441 PSSLII-FMPLWQKLTVLILVLVSGALALSGVGVSERPNNIPSKFFHQMWFMPI 493
Cdd:MTH00210 476 LSNVIPpIVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRGVSIRLYHVI 529
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
53-394 |
1.21e-62 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 216.62 E-value: 1.21e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 53 FDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSE 132
Cdd:MTH00137 86 FDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGR 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 133 KSFNASMLTA-LTNRIGDVAILLCISlWVSCGIFNYGL--VSSASVNV-LSSALTLVIIAAMTKSAQIPFSAWLPAAMAA 208
Cdd:MTH00137 166 ADANTAALQAvIYNRVGDIGLILAMA-WMATNLNSWEIqqIFALSKDFdLTLPLLGLILAATGKSAQFGLHPWLPSAMEG 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 209 PTPVSALVHSSTLVTAGVYFLVRM------NYLILlsgwsSWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMF 282
Cdd:MTH00137 245 PTPVSALLHSSTMVVAGIFLLIRLsplmenNQTAL-----TTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMM 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 283 FSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHTVKDYQDLRKMGGsLINLPALATVCL-VSNLSLCGMPFLSGFYSKD 361
Cdd:MTH00137 320 VTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGG-LHHLTPFTSSCLtIGSLALTGTPFLAGFFSKD 398
|
330 340 350
....*....|....*....|....*....|...
gi 1829764509 362 LILESLFVQGPSLVVFVVSMIATGLTVVYSCRL 394
Cdd:MTH00137 399 AIIEALNTSHLNAWALTLTLIATSFTAVYSLRV 431
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
35-394 |
3.83e-59 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 208.34 E-value: 3.83e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 35 LEWEAFSAFGQKMTLLLlfDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAALVFMFILSMALMILSPNLISLLLG 114
Cdd:PRK07376 73 FEWASAGDFHLPMGYVI--DPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVF 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 115 WDGLGVTSYLLVCYYMSEKSF-NASMLTALTNRIGDVAILLCI-SLWVSCGIFNY-----GLVSSASVNVLSSALT---- 183
Cdd:PRK07376 151 WELVGMCSYLLVGFWYDRKGAaDAAQKAFVVNRVGDFGLLLGIlGLFWATGSFDFdgiadRLSELVSSGAVSGWLAlllc 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 184 -LVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLSGWSSWLLAL-GLFTMTMAGAAAI 261
Cdd:PRK07376 231 iLVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWtGAITAFLGASIAL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 262 FELDMKKVIALSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHTVKDY--------QDLRKMGGSLIN 333
Cdd:PRK07376 311 TQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVvghdpvlaQDMRLMGGLRKY 390
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1829764509 334 LPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLvvFVVSMIATGLTVVYSCRL 394
Cdd:PRK07376 391 MPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPAL--WFVGFLTAGMTAFYMFRM 449
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
51-365 |
1.18e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 198.64 E-value: 1.18e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 51 LLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYM 130
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 131 SEKSFNASMLTAL-TNRIGDVAILLCISL----------------WVSCGIFNYGLVSSASVNVLSSALT----LVIIAA 189
Cdd:MTH00032 156 TRIQANKAAIKAIvVNRVGDVGVILGMVLiyktigsldfltfnggSVGSGIMDRGYYGGGAYESPLAPFAiigiLLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 190 MTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLSGWSSWLLAL-GLFTMTMAGAAAIFELDMKK 268
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIfGALTAFFAATVGLVQNDLKK 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 269 VIALSTLSQLGVMFFSLGM-GQPFMAFFHLISHAYFKAMLFMAAGSIIHTVK-DYQDLRKMGGSLINLPALATVCLVSNL 346
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSF 395
|
330
....*....|....*....
gi 1829764509 347 SLCGMPFLSGFYSKDLILE 365
Cdd:MTH00032 396 SIMGLPYLTGFYSKDLILE 414
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
12-390 |
4.80e-53 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 186.12 E-value: 4.80e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 12 ALLLLAILSGGVGFIFMSGGELALEWEAFSAfgqKMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAAL 91
Cdd:COG0651 36 ASLALLALALALLLQVLAGGPLVYALGGWPA---PFGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 92 VFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTALTNRIGDVAILLCIS-LWVSCGIFNY--- 167
Cdd:COG0651 113 FLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGlLYGATGTLNMadl 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 168 -GLVSSASVNVLSSALTLVIIAAMTKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYFLVRMNYLIL----LSGW 241
Cdd:COG0651 193 aARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLFgadpALFL 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 242 SSWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFM---AFFHLISHAYFKAMLFMAAGSIIHTV 318
Cdd:COG0651 272 GTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT 351
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1829764509 319 KDYqDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVsMIATGLTVVY 390
Cdd:COG0651 352 GTR-DLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVL-LLSSLLTLAY 421
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
28-399 |
1.63e-49 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 183.97 E-value: 1.63e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 28 MSGGELALEWEAFSAFGqkMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFN-PRFAALVFMFILSMALMILSP 106
Cdd:PRK12644 49 LAGGAPTEVVPWIPSLG--LDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRlGRFAAELVAFAGAMFGLVTSD 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 107 NLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTALT-NRIGDVAILL-CISLWVSCGIFNY-GLVSSA-SVNVLSSAL 182
Cdd:PRK12644 127 NLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLvTTAGGLAMLVgIIILGQAAGTYRLsELLADPpTGPAVSVAV 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 183 TLVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMN-YLILLSGWSSWLLALGLFTMTMAGAAAI 261
Cdd:PRK12644 207 VLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLApGFADVPVWRPTVLVLGLATMLLGGWRAL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 262 FELDMKKVIALSTLSQLGVMFFSLGMGQPFMAFFHL---ISHAYFKAMLFMAAGSIIHTVKDyQDLRKMGGSLINLPALA 338
Cdd:PRK12644 287 RQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHSTGT-RDIRKLSGLGRRQPVLA 365
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1829764509 339 TVCLVSNLSLCGMPFLSGFYSKDLILESLFVQG----PSLVVFVVSMIATGLTVVYSCRLTLGIF 399
Cdd:PRK12644 366 VVAALAAASMAGLPPLLGFVAKEAALEAVLHDGalgpAGPVVLAGIVLGSILTVAYSLRFLWGAF 430
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
12-399 |
2.02e-49 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 183.85 E-value: 2.02e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 12 ALLLLAILSGGVgfifMSGGELALEWEAFSAFGQKMTLLLlfDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAAL 91
Cdd:PRK12648 39 ALVLLALLYPAV----AAGEVIRAEIEWLPALGLNLSLRL--DGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSF 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 92 VFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYY--MSEKSFNASMLTALTNR-----IGDVAILLCIslwvsCGI 164
Cdd:PRK12648 113 LLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWhhRADARRGARMALTVTGAgglalLAGVLLLGHI-----VGS 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 165 FNYGLVSSASVNVLSS-----ALTLVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMnyLILLS 239
Cdd:PRK12648 188 YDLDVVLAAGDLIRAHplyppALVLILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARL--WPVLA 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 240 GWSSWLLAL---GLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPF---MAFFHLISHAYFKAMLFMAAGS 313
Cdd:PRK12648 266 GTEEWFWIVggaGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGI 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 314 IIH---TvkdyQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLIL-ESLFVQGPSLVVFVVSMIAT---GL 386
Cdd:PRK12648 346 IDHetgT----RDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFaETLDTHLLGSLDWLLPVAATlagAF 421
|
410
....*....|...
gi 1829764509 387 TVVYSCRLTLGIF 399
Cdd:PRK12648 422 SVAYSLRFIHDVF 434
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
12-389 |
1.15e-48 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 180.11 E-value: 1.15e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 12 ALLLLAILSGGVGFI--FMSGGELALEWEAFSAFGqkMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFA 89
Cdd:PRK12647 21 ALLPLALFLYFLSFIpeIAAGETVRGGYAWVPSLG--VNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFY 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 90 ALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTALTNRIGDVAILLC--ISLWVSCGIFNY 167
Cdd:PRK12647 99 SYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAglILLGNVTGTYSL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 168 GLVSSASVNVLSS-----ALTLVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYliLLSGWS 242
Cdd:PRK12647 179 SELLASGDVIREHplylaILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNP--VLGGTP 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 243 SWLLALGLF---TMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQP--FMAFF-HLISHAYFKAMLFMAAGSIIH 316
Cdd:PRK12647 257 LWQTILPLFgglTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSElaIKAAVlFLVAHSLYKGALFMVAGIIDH 336
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1829764509 317 TVKDyQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILES-LFVQGPSLVVFVVSMIATGLTVV 389
Cdd:PRK12647 337 ETGT-RDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEAlLEAPLWSLILTVAAVLGNALMVA 409
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
26-399 |
3.38e-48 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 179.27 E-value: 3.38e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 26 IFMSGGELALEWEAFSAFGQKMTLLLlfDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAALVFMFILSMALMILS 105
Cdd:TIGR00940 48 YTASGGVLHYTIDWVPELGLNFTLYM--DGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLS 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 106 PNLISLLLGWDGLGVTSYLLVCYYM-SEKSFNASMLTALTNRIGDVAILLCISL-WVSCGIFNYGLVSSASVNVLSS--- 180
Cdd:TIGR00940 126 DNLILLYVFWELTSIVSFLLISYWHhRAHSRYGAQKSLTITVFGGLAMLGGLILlGKITGSFSIDAVIASADAIRNSplf 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 181 --ALTLVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLSGWSSWLLAL-GLFTMTMAG 257
Cdd:TIGR00940 206 gtAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLaGLITLLWGS 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 258 AAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFM----------------AFFHLISHAYFKAMLFMAAGSIIHTVKDy 321
Cdd:TIGR00940 286 YFAIFQQDLKGILAFSTISQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHETGT- 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 322 QDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLF---------VQGPSLVVFVVSMIATGLTVVYSC 392
Cdd:TIGR00940 365 RDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAItahlvnpfdTVTLGYLFPYVATVASVFTFVYSL 444
|
....*..
gi 1829764509 393 RLTLGIF 399
Cdd:TIGR00940 445 RFIHGVF 451
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
25-467 |
6.74e-46 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 168.90 E-value: 6.74e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 25 FIFMSGGELALEWEAFSAFGQKMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAALVFMFILSMALMIL 104
Cdd:MTH00063 15 FLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 105 SPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTALTNRIGDVA--ILLCISLWVSCGIFNYGLVssasvnvlssaL 182
Cdd:MTH00063 95 TGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVClfLLIGLSCWGGSGSFLCCLF-----------F 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 183 TLVIIaamTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLSGWSSWLLALGLFTMTMAGAAAIF 262
Cdd:MTH00063 164 FLIVF---TKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIFITGVSSLF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 263 ELDMKKVIALSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIHTVKDYQDLRKMGGSLINLPALATVCL 342
Cdd:MTH00063 241 FSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYGSWNLFYLF 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 343 VSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVSMIATGLTVVYSCRLtlgiFNLFSGRESYSAEGDSDFFMLGGM 422
Cdd:MTH00063 321 LLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRL----CLILFGVKSSLSSGVRFLFFNSGL 396
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1829764509 423 SILMGPAImgGWWLSGLMPSSLIIFmpLWQKLTVLILVLVSGALA 467
Cdd:MTH00063 397 MVFLWLFI--NYYVFLLLDEVVYLG--VFISLVLLLVQLLGLLVG 437
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
38-399 |
7.75e-46 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 173.31 E-value: 7.75e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 38 EAFSAFGQKMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAALVFMFILSMALMILSPNLISLLLGWDG 117
Cdd:PRK12650 62 PDLLGNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 118 LGVTSYLLVCYYMSEKSfNASMLTALTNRIGDVAILLCISLWVS-CGIFNYGLVSSASVNVLSSALT-----LVIIAAMT 191
Cdd:PRK12650 142 VSLASFFLIARSGSGGE-AGSIRTLILTFFGGLTLLAAVAIAATqTGTTSLSGILHSDVWAEKPGLTtvvavLIAVAAFT 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 192 KSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNylILLSG---WSSWLLALGLFTMTMAGAAAIFELDMKK 268
Cdd:PRK12650 221 KSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFS--PVFHDvavWNWLLIIVGMITALMGAVFAVQKTDLKK 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 269 VIALSTLSQLGVMFFSLGMGQPF---MAFFHLISHAYFKAMLFMAAGSIIHTVKDyQDLRKMGGSLINLPALATVCLVSN 345
Cdd:PRK12650 299 LTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQAGT-RDIRRLGSLWRRMPFTFVSVTIAA 377
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1829764509 346 LSLCGMPFLSGFYSKDLILESlFVQGP-----SLVVFVVSMIATGLTVVYSCRLTLGIF 399
Cdd:PRK12650 378 LSMAAVPPLFGFVSKEGMLTA-FLEAPggnagVVLLLVGAALGAVFTFAYSARLVLGAF 435
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
56-399 |
1.56e-45 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 171.23 E-value: 1.56e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 56 ISLIFLSTVCLIsgcVFFYSVSYMGGDMFNPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSF 135
Cdd:CHL00025 95 IMLILITTVGIL---VLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIA 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 136 -NASMLTALTNRIGDVAILLCIS--LWVS--------CGIFNyGLVSSASVNVLSSAL--TLVIIAAMTKSAQIPFSAWL 202
Cdd:CHL00025 172 aNACQKAFVTNRVGDFGLLLGILgfYWITgsfefrdlFEIFN-NLIYNNEVNLLFATLcaFLLFLGPVAKSAQFPLHVWL 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 203 PAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLSGWSSWLLAL-GLFTMTMAGAAAIFELDMKKVIALSTLSQLGVM 281
Cdd:CHL00025 251 PDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLiGIITALLGATLALAQKDIKRGLAYSTMSQLGYM 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 282 FFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSIIH---TVKDY-----QDLRKMGGSLINLPALATVCLVSNLSLCGMPF 353
Cdd:CHL00025 331 MLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHsmePIVGYspdksQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPP 410
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1829764509 354 LSGFYSKDLILESLFVQGPSLVvfVVSMIATGLTVVYSCRLTLGIF 399
Cdd:CHL00025 411 LACFWSKDEILNDSWLYSPIFA--IIAWSTAGLTAFYMFRIYLLTF 454
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
51-399 |
5.62e-45 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 169.94 E-value: 5.62e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 51 LLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFN-PRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYY 129
Cdd:PRK12646 74 LRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNlPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYW 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 130 MSEK-SFNASMLTALTNRIGDVAILL-CISLWVSCGIFNYGLVSSASVNVLSSAL-----TLVIIAAMTKSAQIPFSAWL 202
Cdd:PRK12646 154 YNNGdSQFGAIQSFMITVFGGLALLVgFIMLYIMTGTNNITEILGQADHIKNHGLfipmiFMFLLGAFTKSAQFPFHIWL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 203 PAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLSGWSSWLLA-LGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVM 281
Cdd:PRK12646 234 PRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTfVGLITMLFGSITALKQWDLKGILAYSTISQLGMI 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 282 FFSLGMGQP-----------------FMAFFHLISHAYFKAMLFMAAGSIIHTVKDyQDLRKMGGSLINLPALATVCLVS 344
Cdd:PRK12646 314 MAMVGIGGGyaqhqqdaiasiyvfvlFAALFHLMNHAIFKCALFMGVGIIDHEAGT-RDIRILSGMRQLFPKMNLVMTIA 392
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1829764509 345 NLSLCGMPFLSGFYSKDLILESL--------FVQGPSLVVFVVSMIATGLTVVYSCRLTLGIF 399
Cdd:PRK12646 393 ALSMAGVPFLNGFLSKEMFLDALtqtgqlsqFSLISMIIIVFIGVIASIFTFTYALYMVKEVF 455
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
28-399 |
1.48e-41 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 160.09 E-value: 1.48e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 28 MSGGELALEWEAFSAFGQKMTLLLlfDFISLIFLSTVCLISGCVFFYSVSYMGGDMFN-PRFAALVFMFILSMALMILSP 106
Cdd:PRK12645 53 MSGNTVMKTLPWIPSLGINFTLYV--DGLSLLFALLITGIGSLVVLYSIYYLSKKKEQlGNFYVYLLLFMGAMLGVVLSD 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 107 NLISLLLGWDGLGVTSYLLVCY-YMSEKSFNASMLTALTNRIGDVAILLCIS-LWVSCGIFNY-GLVSSASVNVLSS--- 180
Cdd:PRK12645 131 NLIVLYLFWELTSISSFLLISYwYEREASRYGAQKSMLITVFGGLSMLGGFIlLYIMTGSFSIrEMIANADEIQNSPlfi 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 181 -ALTLVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLSGWSSWLLAL-GLFTMTMAGA 258
Cdd:PRK12645 211 pAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLvGLITLFWGSL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 259 AAIFELDMKKVIALSTLSQLGVMFFSLGMGQP----------------FMAFFHLISHAYFKAMLFMAAGSIIHTVKDyQ 322
Cdd:PRK12645 291 NAVKQTDLKGILAFSTVSQLGLIMSLLGIGAAslhyqgddskiyaaaiTAAIFHLINHATFKGSLFMIVGIVDHETGT-R 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 323 DLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLF---------VQGPSLVVFVVSMIATGLTVVYSCR 393
Cdd:PRK12645 370 DIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMLnateanlfsLDTWGVLFPVIAWVASVFTFVYSII 449
|
....*.
gi 1829764509 394 LTLGIF 399
Cdd:PRK12645 450 FIFKTF 455
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-380 |
3.86e-41 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 150.16 E-value: 3.86e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 105 SPNLISLLLGWDGLGVTSYLLVCYYM-SEKSFNASMLTALTNRIGDVAILLCISL------WVSCGIFNYGLVSSASVNV 177
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGkSPRSSEAGMKYFLLTLLGSSILLFGISLmynytgTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 178 LSSALTLVIIAAMTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYFLVRMNYLILLSG--WSSWLLALGLFTMT 254
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSpfIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 255 MAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPF---MAFFHLISHAYFKAMLFMAAGSIIHTVKDYQDLRKMGGSL 331
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1829764509 332 INLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVS 380
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
13-368 |
1.31e-37 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 145.12 E-value: 1.31e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 13 LLLLAILSGGVG-FIFMSGGELALEWEAFSaFGQKMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMG-------GDMF 84
Cdd:PRK06525 33 FAALTTLCMLSLaYAFYQAGKVAVTLTLVN-LGDVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEG 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 85 NPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTALTNRIGDVAILLCIS-LWVSCG 163
Cdd:PRK06525 112 TGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAAtLFLQTG 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 164 IFNYGLVSSASVNVLSSALTLVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVR----MNYLILLS 239
Cdd:PRK06525 192 TFALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARaiqsMGPIPHVI 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 240 GWSswLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMG--QPFMAF----FHLISHAYFKAMLFMAAGS 313
Cdd:PRK06525 272 GYV--GAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilGSRLALegsiAYIFNHAFAKSLFFLVAGA 349
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1829764509 314 IIHTVKDyQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLF 368
Cdd:PRK06525 350 LSYSCGT-RLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGF 403
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
74-399 |
4.33e-36 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 143.82 E-value: 4.33e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 74 YSVSYMGGDMFNPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMS--EKSFNASMLTALTNRIGDVA 151
Cdd:PRK12649 99 YSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHrpESVYGATKSLLITAGGGLFM 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 152 ILLCISLWVSCGIFNYGLV--SSASVNVLSS------ALTLVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVT 223
Cdd:PRK12649 179 FAGFLLLHVITGTYDIATIlqDSELIENIKGhplfliTLILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVK 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 224 AGVYFLVRMNylILLSGWSSWLL---ALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMG---QPFMAF--- 294
Cdd:PRK12649 259 AGVYLVARIH--PIFSGTEAWFIlvsGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTtyhEPGLGVaaa 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 295 -FHLISHAYFKAMLFMAAGSIIHTVKDyQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLF----- 368
Cdd:PRK12649 337 tFHLLNHATFKACLFLVAGIVAHEAAT-RDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSVemgal 415
|
330 340 350
....*....|....*....|....*....|..
gi 1829764509 369 VQGPSLVVFVVSMIATG-LTVVYSCRLTLGIF 399
Cdd:PRK12649 416 IGGPFTIIIPAVAVLGGvFTFAYSIKLIDGIF 447
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
54-383 |
8.02e-32 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 130.39 E-value: 8.02e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 54 DFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAALVFM--FILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMS 131
Cdd:PRK06521 79 DALSAFFLLVISLLGAAASLYSLGYFREYEGKGPGAMGFFYnlFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHR 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 132 EKS-FNASMLTALTNRIGDVAILLCISL-WVSCGIFNYGLVSSASVNVL--SSALTLVIIAAMTKSAQIPFSAWLPAAM- 206
Cdd:PRK06521 159 EAEiRRAGFLYLLMAHAGALAILLAFGLlARESGSYDFAAMRAAHLSPFwaSLVFLLALFGFGAKAGLVPLHVWLPRAHp 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 207 AAPTPVSALVhSSTLVTAGVYFLVRMNYLIL---LSGWSSWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFF 283
Cdd:PRK06521 239 AAPSHVSALM-SGVMLKVAIYGILRVVFDLLgapGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFV 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 284 SLGMGQPFMA--------------FFHLISHAYFKAMLFMAAGSIIHTVKDyQDLRKMGGSLINLPALATVCLVSNLSLC 349
Cdd:PRK06521 318 GLGLAMVFIAygmpllaalaltaaLYHLLNHALFKSLLFLGAGAVLHATGT-RDMEKLGGLIRRMPWTAWAFLIGCLAIS 396
|
330 340 350
....*....|....*....|....*....|....
gi 1829764509 350 GMPFLSGFYSKDLILESLFvQGPSLVVFVVSMIA 383
Cdd:PRK06521 397 ALPPLNGFVSEWLLLQSLL-SSPGLPQWGLKLAV 429
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-399 |
1.03e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 128.07 E-value: 1.03e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 54 DFISLIFLSTVCLISGCVFFYSVSYmgGDMFNPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEK 133
Cdd:PRK08375 76 DSLSALFLLVTSILAIAALLYAIGY--GEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 134 SFNASMLTALTNRIGDVAILLCISL-WVSCGIFNYGLVSS--ASVNVLSSALTLVIIAAMTKSAQIPFSAWLPAAMAAPT 210
Cdd:PRK08375 154 ALAAARKYLIVGLIGSTFLLIGVGLlYGVTGTLNMADLAGalAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 211 PVSALVHSSTLVTAGVYFLVRMNYLIL------LSGWSSWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFS 284
Cdd:PRK08375 234 PVVTALLSGLVTKVAVYALIRIYFTVFggdfrfALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLG 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 285 LGMGQPFM---AFFHLISHAYFKAMLFMAAGSIIHTVKDyQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKD 361
Cdd:PRK08375 314 LALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTYGT-RRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKW 392
|
330 340 350
....*....|....*....|....*....|....*...
gi 1829764509 362 LILESLFVQGpSLVVFVVSMIATGLTVVYSCRLTLGIF 399
Cdd:PRK08375 393 YLVVGAVEAG-QWLVLAVLLASSLLALLYFLRIWYRAF 429
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
3-383 |
5.19e-31 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 127.54 E-value: 5.19e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 3 SLLFFTVSQALLLLAilsgGVGFIFMSGGELALEWEAFSAFGqkmtLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGD 82
Cdd:PRK08667 33 SVLWLVIAIALLLFA----GSLQLFTGNPLDIPLWGIAPGLD----ITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHM 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 83 MFNPR---FAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCY-YMSEKSFNASMLTALTNRIGDVAILL-CIS 157
Cdd:PRK08667 105 SSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNdYQEEETQRAGIFYFVMTQLSTVFLMLgIIV 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 158 LWVSCGIFNYGLVSSASVnVLSSALTLVIIAAMTKSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYFLVR--MNY 234
Cdd:PRK08667 185 LFIQTGSFELSPLGASAG-ILSLVFLLLFLGFGIKAGIIPFHKWLPYAHpASPSNVSALM-SGVMLKVAVYGLVRflMDV 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 235 LILLSGWSSWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGM-------GQPFMAF-------FHLISH 300
Cdd:PRK08667 263 LSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvyGLDTLALlalggalFHSLNH 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 301 AYFKAMLFMAAGSIIHTVKDyQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLF----VQGPSLVV 376
Cdd:PRK08667 343 ALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFqsfsVADPLIKI 421
|
....*..
gi 1829764509 377 FVVSMIA 383
Cdd:PRK08667 422 LLFSVLA 428
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-402 |
4.46e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 117.61 E-value: 4.46e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 49 LLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMF--NPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLV 126
Cdd:PRK06589 77 IGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIdsSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 127 CYymsekSFNASMLTALTNRIGDVAILLCISLWVSCGI----FNYGLVSSASV--NVLSSALTLVIIAAMTKSAQIPFSA 200
Cdd:PRK06589 157 GH-----TRNNISLSGGYKYLKILMISALLLFLPAVILiytkTGNLDFVSGGLfsKNQSIILLLMFIYGIAKTAIFPVHS 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 201 WLPAAMAAPTPVSALVHSSTLVTAGVYFLVR-------MNYLILLSGWSSWLLALGLFTMTMAGAAAIFELDMKKVIALS 273
Cdd:PRK06589 232 WLPAAMVAHYPVSALLHAVIVVKTGLFCIYKillyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYS 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 274 TLSQLGVMFFSLGMGQPF---MAFFHLISHAYFKAMLFMAAGSIIhTVKDYQDLRKMGGSLINLPALATVCLVSNLSLCG 350
Cdd:PRK06589 312 TISQLSLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISISSLSLIG 390
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1829764509 351 MPFLSGFYSKDLILESLFVQGPSLVVFVVSMIATGLTVVYSCRLTLGIFNLF 402
Cdd:PRK06589 391 IPIFSGFISKFLILLAASEQNQPWLSIIVMLVVIASSILSALYLLKILSSIY 442
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-411 |
1.54e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 116.22 E-value: 1.54e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 54 DFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEK 133
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 134 -SFNASMLTALTNRIGDVAILL-CISLWVSCGIFNYGLVSSAS---------------VNVLSSALTLVIIAAMTKSAQI 196
Cdd:PRK12667 161 dAVEAAIKYALIGAVGTTLYFLaLAFLYATFGTLNMADLSAKIrglsfpltgglagnpPLALGVALALALWAFTIKAAIF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 197 PFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYFLVRMNYLI---------LLSGWSSWLLALGLFTMTMAGAAAIFELDM 266
Cdd:PRK12667 241 PNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIfgispslidFRAALSPILIILGAVSAIIGALMMVVQKDV 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 267 KKVIALSTLSQLGVMFFSLGMGQPFM---AFFHLISHAYFKAMLFMAAGSIIHTVKDyQDLRKMGGSLINLPALATVCLV 343
Cdd:PRK12667 320 KRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIHAAGT-RDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1829764509 344 SNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVsMIATGLTVVYSCRLtlgIFNLFSGRESYSAE 411
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL-LIASAISLVGYFRA---WYSLFFGKPKSGEE 462
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
15-390 |
6.13e-27 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 115.01 E-value: 6.13e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 15 LLAILSGGVGFI-FMSGGELALEWEAFSAFGqkmtLLLLFDF-ISLIFLSTVCLISGCVFF---YSVSYMGGDMFNPRFA 89
Cdd:PRK07390 48 LLAFVHSLLALRaIWNQPPQQLSFPWLQVAD----LDLSLSLeISPVTLGALELITGLSLLaqiYALGYLEKDWGLARFF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 90 ALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYmseksFNASM-LTA-----LTNRIGDVAILL-CISLWVSC 162
Cdd:PRK07390 124 ALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFW-----YAQPLvVTAardafLTKRVGDLLLLMgVVALSPLA 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 163 GIFNYGLVS--SASVNVLSSALTLVIIA----AMTKSAQIPFSAWLPAAMAAPTPVSALvHSSTLVTAGVYFLVRMNYLI 236
Cdd:PRK07390 199 GTLNFSDLAawAATANLDPLTATLLGLAliagPTGKCAQFPLHLWLDEAMEGPNPASIL-RNSVVVATGAWVLIKLQPVL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 237 LLSGW-SSWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSII 315
Cdd:PRK07390 278 ALSPVaLTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSII 357
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1829764509 316 HTVKDyQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLV---VFVVSMIATGLTVVY 390
Cdd:PRK07390 358 LTTIT-QDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVgvlLLVNALTAFNLTRVF 434
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-425 |
8.71e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 107.88 E-value: 8.71e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 54 DFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSE- 132
Cdd:PRK08376 89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTw 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 133 KSFNASMLTALTNRIGDVAILLCIS-LWVSCGIFNYGLV----SSASVNVLSSALTLVIIAAMTKSAQIPFSAWLPAAM- 206
Cdd:PRK08376 169 EAIEAGIKYMFVGSLASSMVLLGIAlLYGQYGTLNMAYLavkmSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYp 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 207 AAPTPVSALVHSSTLvtAGVYFLVRMNYLILLSGWSS----WLLA-LGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVM 281
Cdd:PRK08376 249 AAPSSISAMLLVIKQ--AGLYALARVLFSIYGPAINLatvgWVIIiLGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYM 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 282 FFSLGMG-----QPFM----------AFFHLISHAYFKAMLFMAAGSIIHTVKDyQDLRKMGGSLINLPALATVCLVSNL 346
Cdd:PRK08376 327 LLGLGVGlaalgDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT-RNLNELGGLARTMPKTTIAFLIGAA 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 347 SLCGMPFLSGFYSKDLILESLFVQGPSLVVFvvSMIATGLTVVYSCRLtlgIFNLFSGRES--YSAEGDSDFFMLGGMSI 424
Cdd:PRK08376 406 AIVGLPPFNGFASKWLIYESSALFNPILGVI--AMIGSVLTLASFVKV---FHTAFFGPPSekVMNVKEPPKPMLVPMLI 480
|
.
gi 1829764509 425 L 425
Cdd:PRK08376 481 L 481
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
87-394 |
3.23e-24 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 106.00 E-value: 3.23e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 87 RFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTALTNRIGDVAILLCISL-WVSCGIF 165
Cdd:PRK08377 109 KYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALiYGATGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 166 NYG----LVSSASVNVLSSALTLVIIAAMTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYFLVRMNYLI-LLS 239
Cdd:PRK08377 189 NMAhiaqLAGTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLMqNAN 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 240 GWSSWL---LALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPF---MAFFHLISHAYFKAMLFMAAGS 313
Cdd:PRK08377 268 GWSSVLklvIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdAGVFHMINHAIVKALLFLAVGY 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 314 IIHTVKDyQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVsMIATGLTVVYSCR 393
Cdd:PRK08377 348 VGITLGG-TEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALV-LGASVVEAVYYFR 425
|
.
gi 1829764509 394 L 394
Cdd:PRK08377 426 L 426
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-367 |
4.75e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 102.34 E-value: 4.75e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 13 LLLLAILSGGVGFIFMSGGElALEWEAFSAFGqkmtLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGgdmfNPRFAALV 92
Cdd:PRK07234 30 ALGMAIVSAVYALGLVASMV-PLELTLLDNFG----VTLRADALSGYFILTNALVTLAVIFYCWESAK----TRFFYAQL 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 93 FMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTALTNRIGDVAILLCISL-WVSCGIFNYGLVS 171
Cdd:PRK07234 101 LILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLvYQANGTFAFSGLA 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 172 SASvnvlSSALTLVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMnyLILLSGWSSWLLALGLF 251
Cdd:PRK07234 181 TAD----PEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRC--ALDVPGLDLIVRIFGVG 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 252 TMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSlgmgqPFMAFFHLISHAYFKAMLFMAAGsIIHTVKDYQDLRKMGGSL 331
Cdd:PRK07234 255 TALLGVLFALLEKDLKRMLAFSTISQLGFILAA-----PLVGGLYALAHGLVKSTLFLCAG-ALPSRNFTELISQMLGIG 328
|
330 340 350
....*....|....*....|....*....|....*.
gi 1829764509 332 INLPalatvCLVSNLSLCGMPFLSGFYSKDLILESL 367
Cdd:PRK07234 329 KWIP-----LTMASFSIAGFPLLAGFVSKVLTLKNL 359
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
9-315 |
6.13e-23 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 102.47 E-value: 6.13e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 9 VSQALLLLAILSGGVGFIFmsggeLALEWEAFSafgqkmTLLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRF 88
Cdd:PRK08168 34 IAQAASLAGLFLALLGLVL-----FATGAAWPA------AAWLEVSGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRY 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 89 AALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKsfnASMLTA----LTNRIGDVAILLCISLW---VS 161
Cdd:PRK08168 103 VRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP---FARLAAhkkfIADRLAELLLLAAAALAyleVG 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 162 CGIFNYGLVSSASVNVLSS---ALTLVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSStLVTAGVYFLVRMNYLILL 238
Cdd:PRK08168 180 SLSLSALWAHLAAQGASPSlqaAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQ 258
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1829764509 239 SGWSSWLL-ALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSII 315
Cdd:PRK08168 259 APPARWLLvLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
38-435 |
4.27e-22 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 100.07 E-value: 4.27e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 38 EAFSAFGQKMTLLLLFDFISLIFLSTVCLISGCVFFYSVSYmgGDMFNPRFAALVFMFILSMALMILSPNLISLLLGWDg 117
Cdd:PRK08668 52 EKLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSE--KTKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWE- 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 118 LGVTSYLLVCYYMSEKSFNASMLTALTNRIGDVAILLCI-SLWVSCGIFNYGLVSSASVNVLSSALTLVII-----AAMT 191
Cdd:PRK08668 129 IMTFSSFMMVPMGKKESRKASLKYFVLSAIGAYAMLYAIfLIYAKTGTFDFADISQGLINDTSTGFALIVFlfllaFGVA 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 192 KSAQIPFSAWLPAAMA-APTPVSAlVHSSTLVTAGVYFLVRMNYLILLSGWSSW-------------LLALGLFTMTMAG 257
Cdd:PRK08668 209 KAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLYVLPGTKLFSEfgtyrgvplfnyiLAWLGNISIIVGT 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 258 AAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFM---AFFHLISHAYFKAMLFMAAGSIIHTVKDYQdLRKMGGSLINL 334
Cdd:PRK08668 288 LMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfagGLFHVFNHALFKGLFFLIFAAVIYRTGTTK-ISEMGGLIEKM 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 335 PALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVsMIATGLTVVYSCRLTLGIFnLFSGRESYSAEGDS 414
Cdd:PRK08668 367 PFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMA-FFGSIGSFLYVFRPLAGVF-LGQLPSDHKDVKEA 444
|
410 420
....*....|....*....|.
gi 1829764509 415 DFFMLGGMSILMGPAIMGGWW 435
Cdd:PRK08668 445 PLPMLIPMAILVLLNVVFGVA 465
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
108-425 |
7.91e-21 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 96.12 E-value: 7.91e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 108 LISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTALTNRIGDVAILLCISLWVS-CGIFNYGLVSSASvnvlSSALTLVI 186
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAeTGSFAFGAIAGLG----GTAAWLIL 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 187 IAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMnylilLSGWSsWLLALGLFtMTMAGAA-AIFELD 265
Cdd:PRK12668 191 IGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARA-----FPGTE-LLIYIGAA-MAVYGVFfALLEND 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 266 MKKVIALSTLSQLGVMFFSLGMGQPFM---AFFHLISHAYFKAMLFMAAGSIIHTVKDyQDLRKMGGSLINLPALATVCL 342
Cdd:PRK12668 264 LRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTGT-EKLTELGGLYRSMPLTALFCL 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 343 VSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVSMIATGltVVYSCRLTLGIFNLFSGRESYSAEgDSDFFMLGGM 422
Cdd:PRK12668 343 VGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASAG--TFLHFGIKLPYFAFFGGDSGLRVK-DAPRNMLVAM 419
|
...
gi 1829764509 423 SIL 425
Cdd:PRK12668 420 GIA 422
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
184-391 |
1.09e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 92.32 E-value: 1.09e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 184 LVIIAAMTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYFLVRMNYLILLSGWS---SWLLALGLFTMTMAGAA 259
Cdd:PRK07691 214 LFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSfthYLILILALLTIIFGVIG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 260 AIFELDMKKVIALSTLSQLGVMFFSLGMGQPFM---AFFHLISHAYFKAMLFMAAGSIIHTVKdYQDLRKMGGSLINLPA 336
Cdd:PRK07691 293 AVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIKITG-TTDLKKMGGLIKRYPV 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1829764509 337 LATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVsmIATGLTVVYS 391
Cdd:PRK07691 372 LGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIV--LLSSLLVLYS 424
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
197-394 |
3.61e-18 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 87.44 E-value: 3.61e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 197 PFSAWLP-AAMAAPTPVSALvHSSTLVTAGVYFLVRMNYLIL---LSGWSSWLLALGLFTMTMAGAAAIFELDMKKVIAL 272
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFALPLFpeaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 273 STLSQLGVMFFSLGMGQPFM---AFFHLISHAYFKAMLFMAAGSIIHTVKDYqDLRKMGGSLINLPALATVCLVSNLSLC 349
Cdd:COG1008 306 SSVSHMGFVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRTHTR-DIADLGGLAKRMPVLAALFLLAALASL 384
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1829764509 350 GMPFLSGFYSKDLILESLFVQGPslVVFVVSMIATGLTVVYSCRL 394
Cdd:COG1008 385 GLPGTSGFVGEFLVLLGAFQVNP--WLAILAALGLILTAAYLLWM 427
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
168-383 |
1.30e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 79.41 E-value: 1.30e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 168 GLVSSASVNVLSSALTLVIIAAMTKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYFLVRMNYLILLSG----WS 242
Cdd:PRK08676 195 AHASLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGaaeqFS 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 243 SWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQP---FMAFFHLISHAYFKAMLFMAAGsIIHTVK 319
Cdd:PRK08676 274 NVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPlalFWMLFHMLAHSLVKSGLFFSAG-ILHRQY 352
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1829764509 320 DYQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVSMIA 383
Cdd:PRK08676 353 RSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLL 416
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
176-392 |
2.07e-15 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 78.82 E-value: 2.07e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 176 NVLSSALTLVIIAAMTKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYFLVRMNYLILLSGWSSW----LLALGL 250
Cdd:PRK06458 211 TLMKLAFVFLLIGFGTKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSDFpgrlLLIFGL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 251 FTMtmaGAAAIFEL---DMKKVIALSTLSQLGVMFFSLGMGQP---FMAFFHLISHAYFKAMLFMAAGSIIHtVKDYQDL 324
Cdd:PRK06458 290 LSV---LVAAFFLLrqrDIKRLFAYSSIEHMGLIAFALGIGGPlgiFAALLHMLNHSLTKSAIFFASGNVLQ-KYGTRDI 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1829764509 325 RKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVsmiATGLTVVYSC 392
Cdd:PRK06458 366 NVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILL---LLLLTLAFAA 430
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
184-315 |
2.69e-14 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 75.46 E-value: 2.69e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 184 LVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSStLVTAGVYFLVRMNYLILLSGWSSWLLALGLFTMTMAGAAAIFE 263
Cdd:PRK08601 209 LLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLIGTGISLVQ 287
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1829764509 264 LDMKKVIALSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSII 315
Cdd:PRK08601 288 VDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
52-366 |
9.42e-13 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 70.45 E-value: 9.42e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 52 LFDFISLIFLSTVCLISGCVFFysvSYMGGDMFNPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMS 131
Cdd:PRK06277 69 LFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGT 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 132 EKSFNASMLTALTNRIGDVAILLCISLWVSC-------GIFNYGLVSSASVNVLSSALtLVIIAAMTKSAQIPFSAWLPA 204
Cdd:PRK06277 146 EEAYKAALKYMILGNVAGSILLLGIGFLLAStgtlnitDIHNALLVNPTSPVIYGGLL-LLIFGLLYGSGLPPFHTIKSD 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 205 AMAAPTP-VSALVHSS---TLVTAGVYFLVRMNYLILLSGWSSWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGV 280
Cdd:PRK06277 225 IYAKAKPfGSALLQTFskfVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGY 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 281 MFFSLGMGQPF---MAFFHLISHAYFKAMLFMAAGsIIHTVKDYQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGF 357
Cdd:PRK06277 305 VAAGLALGTPLgivAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGF 383
|
....*....
gi 1829764509 358 YSKDLILES 366
Cdd:PRK06277 384 QSKLMLAQA 392
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
196-373 |
2.33e-12 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 69.47 E-value: 2.33e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 196 IPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNyliLLSG-----WSSWLLALGLFTMTMAGAAAIFELDMKKVI 270
Cdd:PRK08042 197 IPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLS---LLGGnaplwWGVALLVLGMITAFVGGLYALMEHNIQRLL 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 271 ALSTLSQLGVMFFSLGMG-------QPFM-------AFFHLISHAYFKAMLFMAAGSIIHTVkDYQDLRKMGGSLINLPA 336
Cdd:PRK08042 274 AYHTLENIGIILLGLGAGvtgialeQPALialglvgGLYHLLNHSLFKSVLFLGAGSVWFRT-GHRDIEKLGGIGKKMPV 352
|
170 180 190
....*....|....*....|....*....|....*..
gi 1829764509 337 LATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPS 373
Cdd:PRK08042 353 ISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNS 389
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
5-379 |
3.66e-12 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 68.60 E-value: 3.66e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 5 LFFTVSQALLLLAILSGGvgfifmsggeLALEWEAFSAFGQkmtlLLLFDFISLIFLSTVCLISGCVFFYSVSYM-GGDM 83
Cdd:COG1007 34 LLAGLALLGLLLALALLL----------LALGGGTGTAFGG----MFVVDGFALFFKLLILLAALLVLLLSRDYLeRRGL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 84 FNPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCY-YMSEKSFNASMLTALTNRIGDVAILLCISLWvsc 162
Cdd:COG1007 100 LRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFrRDDRRSSEAALKYFLLGALSSGFLLYGISLL--- 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 163 gifnYGLVSSASVNVLSSALT--------------LVIIAAMTKSAQIPFSAWLP-AAMAAPTPVSALVhsSTLV-TAGV 226
Cdd:COG1007 177 ----YGATGSLNLAGIAAALAagganspllllglvLVLAGLAFKLSAVPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAF 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 227 YFLVRMNYLILLSGWSSW---LLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFM---AFFHLISH 300
Cdd:COG1007 251 AALLRLLVEAFPGLAADWqllLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGvsaALFYLLAY 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 301 AYFKAMLFMAAGSIIHTVKDYQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQG-PSLVVFVV 379
Cdd:COG1007 331 LFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGlYWLAVIAV 410
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
184-390 |
3.87e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 68.84 E-value: 3.87e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 184 LVIIAAMTKSAQIPFSAWLPAAM-AAPTPVSAlVHSSTLVTAGVYFLVRMNYLILLSGwSSW--LLALGLFTMTMAGAAA 260
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGG-GLDtlLMVVALLTMVVGILGA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 261 IFELDMKKVIALSTLSQLGVMFFSLGMGQPF---MAFFHLISHAYFKAMLFMAAGsIIHTVKDYQDLRKMGGSLINLPAL 337
Cdd:PRK12665 292 IAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLL 370
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1829764509 338 ATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLV-VFVVSMIATGLTVVY 390
Cdd:PRK12665 371 AVLFFVPALNLGGIPPFSGFIGKVALLEAGAEDGTWLAwALVAGGVVTSLLTLY 424
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
12-390 |
3.44e-11 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 65.61 E-value: 3.44e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 12 ALLLLAILSGGVGFIFmsggeLALEWEAFSAFGQkmtlLLLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMfNPRFAAL 91
Cdd:PRK05777 39 TLAVLALLLALVALLF-----VLGAAGGGTAFGG----MLVVDGFALFLKGLILLASLLALLLARPYLEDRG-RGEFYLL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 92 VFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCY-YMSEKSFNASMLTALTNRIGDVAILLCISLWVSC-------G 163
Cdd:PRK05777 109 VLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALrRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGAtgslsfaG 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 164 IFNYGLVSSASVNVLSSALTLVIIAAMTKSAQIPFSAWLPAAM-AAPTPVSALVHSSTLVtAGVYFLVRMNYLILLSGWS 242
Cdd:PRK05777 189 IAKALADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAFGGLSE 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 243 SW---LLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFM---AFFHLISHAYFKAMLFMAAGSIIH 316
Cdd:PRK05777 268 DWqqvLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGysaVLFYLLAYLFMTLGAFGVISLLRR 347
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1829764509 317 TVKDYQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVfVVSMIATGLTVVY 390
Cdd:PRK05777 348 KGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLA-VIGVLNSAIGAFY 420
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
120-394 |
4.51e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 65.14 E-value: 4.51e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 120 VTSYLLVCYYMSEKSFNASMLTALTNRIGDVAILLCIS-LWVSCGIFNYG-----LVSSASVNVLSSALTLVIIAAMTKS 193
Cdd:PRK12662 144 ISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGfLYAITGTLNMGdmfliIQDLPTNRAIQIGVLFIMVGLFIKA 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 194 AQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRM-------NYLILLSGWSSWLLALGLFTMTMAGAAAIFELDM 266
Cdd:PRK12662 224 ALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDI 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 267 KKVIALSTLSQLGVMFFSLGMGQP---FMAFFHLISHAYFKAMLFMAAGSIIHTVkDYQDLRKMGGSLINLPALATVCLV 343
Cdd:PRK12662 304 KRIFAYSSISHIGYIILAVSLNTYyglAAAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVL 382
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1829764509 344 SNLSLCGMPFLSGFYSKDLILESlFVQGPSLVVFVVSMIATGLTVVYSCRL 394
Cdd:PRK12662 383 LSLSLIGMPPTSGFVAKWYILDA-FIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
182-390 |
4.86e-11 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 65.11 E-value: 4.86e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 182 LTLVIIAAMTKSAQIPFSAWLP-AAMAAPTPVSALVhSSTLVTAGVYFLVRMNYLILLSGW---SSWLLALGLFTMTMAG 257
Cdd:PRK06473 208 LAPILVGFGIKIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPEAWvylAPWLATWAVVSVLYGA 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 258 AAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFM---AFFHLISHAYFKAMLFMAAGSIIHTV--KDYQDLRKMGGSLI 332
Cdd:PRK06473 287 SCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSilaAVFQMISHGLISALLFLLVGVVYKKTgsRDVDVLRGLLNPER 366
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1829764509 333 NLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPslVVFVVSMIATGLTVVY 390
Cdd:PRK06473 367 GLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFP--VQTLLCMIGTGLTAVY 422
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
184-391 |
6.26e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 61.50 E-value: 6.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 184 LVIIAAMTKSAQIPFSaWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILL---SGWSSWLLALGLFTMTMAGAAA 260
Cdd:PRK12663 212 LFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPqerELLHPLLATMAAITMVIGALGA 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 261 IFELDMKKVIALSTLSQLGVMFFSLGMGQPFM---AFFHLISHAYFKAMLFMAAGSIIHtVKDYQDLRKMGGSLINLPAL 337
Cdd:PRK12663 291 LAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLF 369
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1829764509 338 ATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPslVVFVVSMIATGLTVVYS 391
Cdd:PRK12663 370 GALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGA--YILLALMLITSLITMYS 421
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
196-394 |
4.41e-09 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 59.06 E-value: 4.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 196 IPFSAWLPAAMA-APTPVSALvHSSTLVTAGVYFLVRMNY--LILLSGW-SSWLLALGLFTMTMAGAAAIFELDMKKVIA 271
Cdd:PRK05846 228 FPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFSLplFPDASHEfAPIIITLGVIAIIYGALVALAQTDIKKLIA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 272 LSTLSQLGVM---FFSLGMGQPFMAFFHLISHAYFKAMLFMAAGSII---HTvkdyQDLRKMGGSLINLPALATVCLVSN 345
Cdd:PRK05846 307 YSSISHMGFVtlgIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYdrlHT----RDIADYGGLAKVMPVLAAFFLFFA 382
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1829764509 346 LSLCGMPFLSGFYSKDLILESLFVQGPSLVVF-VVSMIatgLTVVYSCRL 394
Cdd:PRK05846 383 MASLGLPGTSGFVGEFLILLGSFQVNPVIAFIaTTGLI---LAAVYSLWL 429
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
49-391 |
1.93e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 56.85 E-value: 1.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 49 LLLLFDFISLIFLSTVCLISGC---VFFYSVSYMGGDMFnprFAALVFMFILSMALMILSPNLISLLlgWDGLGVTSYLL 125
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCsilISWHSVKYLTKSFL---ICMLILEFLLYAVFSVLDIFMFYIL--FEGVLIPMYLI 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 126 VCYYMS-EKSFNASMLTALTNRIGDVAILLCI-SLWVSCGIFNY-GLVSSASV--NVLSSALTLVIIAAMTKSAQI-PFS 199
Cdd:MTH00226 171 LGIWGSrEEKMQAAYYFFFYTLIGSVLMLLCLfSLYNIHGTTDYlTLASCSHVvsEQTQKWIFLGIFLAMAVKIPIfPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 200 AWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLSGWSSW---LLALGLFTMTMAGAAAIFELDMKKVIALSTLS 276
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLapaVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 277 QLGVMFFSLGMGQPF---MAFFHLISHAYFKAMLFMAAgSIIHTVKDYQDLRKMGGSLINLPALATVCLVSNLSLCGMPF 353
Cdd:MTH00226 331 HMGLVSITLVTHDIIgltGSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPP 409
|
330 340 350
....*....|....*....|....*....|....*...
gi 1829764509 354 LSGFYSKDLILESLFVQGPSLVVFVVSMIAtgLTVVYS 391
Cdd:MTH00226 410 SGNFIGEYLSILSSFNWNPIIGVFVCSGVI--LSAVYS 445
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
169-386 |
2.26e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 56.78 E-value: 2.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 169 LVSSASVNVLSSALTLVIIAAMTKSAQIPFSAWLPAA-MAAPTPVSALVHSSTLVtaGVYFLVRMNYLILLSGW------ 241
Cdd:PRK12666 200 QLPAADRALLEAGAALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLSTLLFGPEAgasagf 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 242 -SSWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFM---AFFHLISHAYFKAMLFMAAGSI--- 314
Cdd:PRK12666 278 gQDWLLPGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLLADLVerq 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 315 -------------IHTVKDYQDLRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFV--QGPSLVVFVV 379
Cdd:PRK12666 358 rgaaadrlavtpeLYDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNppGAGAAWWLWA 437
|
....*..
gi 1829764509 380 SMIATGL 386
Cdd:PRK12666 438 LVLLSGL 444
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
390-529 |
4.78e-08 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 52.94 E-value: 4.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 390 YSCRLTLGIFNLFSGRESYSAEGDSDFFMLGGMSILMGPAIMGGWWLSGLM-PSSLIIFMPLWQKLTVLILVLVSGALAL 468
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIfPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1829764509 469 SGVGVS-----ERPNNIPSKFFHQMWFMPITFSIGLTNGGLSYGKSNSLNVDETWLTFSTWQGIFK 529
Cdd:pfam06455 81 ELSNLSnkqlkKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAK 146
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
49-378 |
2.83e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 53.26 E-value: 2.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 49 LLLLFDFISL-IFLSTVCLISGCVF-FYSVSYMGGDMFNPRFAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLV 126
Cdd:PRK06459 33 ILLITSIYEYnGVLSFFSIISTIVWiLASLYSIEYDHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAI 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 127 CYYMSEKSFNASMLTaltnrIGDVAILLCISLWvscgIFNYGLVSSASVNVLSSALTLVIIA--AMTKSAQIPF--SAWL 202
Cdd:PRK06459 113 ALTKKNKRPAFVFMA-----FGELSTVLILAGF----AWAFIISGTTNFSYLPSPVPLILASfgFIIKMGMMPFlvSEWL 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 203 PAAMA-APTPVSAlVHSSTLVTAGVYFLVRMNYL---ILLSGWSSWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQL 278
Cdd:PRK06459 184 PIAHGnAPSNFSA-ILSATMTLMGVYGILKMTILtqtIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENN 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 279 GVMFFSLGMGQP-------------FMAFFHLISHAYFKAMLFMAAGSIIHTVKDYQDLRKMGGSLINLpalatvcLVSN 345
Cdd:PRK06459 263 GAILVALGLYMVtkqlitsiehfslITVILYSFAHSVAKTGLFLSSGLQEKQSITYSKKIRNRWIELGL-------TLLA 335
|
330 340 350
....*....|....*....|....*....|...
gi 1829764509 346 LSLCGMPFLSGFYSKDLILESLFVQGPSLVVFV 378
Cdd:PRK06459 336 SSLSGLLPNIGGVASWLLLESLFMFAYVLHNVI 368
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
167-360 |
3.06e-06 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 50.00 E-value: 3.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 167 YGLVSSASVNVLSSALTLVIIAAMT--KSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYFLVRMNYLI---LLSG 240
Cdd:CHL00049 200 NGLINTQMYNSPGISIALIFITVGIgfKLSLAPFHQWTPDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPfyfSSNE 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 241 WSSWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPFMAFFHLISHAYFkaMLFMAAGS----IIH 316
Cdd:CHL00049 279 WHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLF 356
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1829764509 317 TVKDYQD-LRKMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSK 360
Cdd:CHL00049 357 GLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-377 |
1.58e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 47.80 E-value: 1.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 91 LVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTALTNRIGDVAILLCISLWVSCGIFNyglv 170
Cdd:PRK12664 68 CYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYT---- 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 171 ssasvnvlSSALTLVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSstLVTAGVYFLVrmnyLILLSGWSSWLLALGL 250
Cdd:PRK12664 144 --------GYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILLFLGI 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 251 FTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGQPF-----MAFFHLISHAYFKAMLFMAAGSIIHTVKDYqDLR 325
Cdd:PRK12664 210 ITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINRTRKF-NLN 288
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1829764509 326 KMGGsLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVF 377
Cdd:PRK12664 289 RVGG-LFKMSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
186-359 |
3.29e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 46.62 E-value: 3.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 186 IIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILLSG---WSSWLLALGLFTMTMAGAAAIF 262
Cdd:PRK02546 220 LIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAhaqFAPLLIVLGVVNIIYAALTSFA 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 263 ELDMKKVIALSTLSQLGVM------FFSLGMGQpfmAFFHLISHAYFKAMLFMAAGSI---IHTVKdyqdLRKMGGSLIN 333
Cdd:PRK02546 300 QRNLKRKIAYSSISHMGFVligigsFTDLGTSG---AMLQMISHGLIGASLFFLVGATydrTHTLM----LDEMGGVGQK 372
|
170 180
....*....|....*....|....*....
gi 1829764509 334 LP---ALATVCLVSNLSLCGMpflSGFYS 359
Cdd:PRK02546 373 MRkmfAMWTACSLASLALPGM---SGFVA 398
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
86-359 |
9.74e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 45.02 E-value: 9.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 86 PR-FAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTALTNRIGDVAILLC-ISLWVSCG 163
Cdd:PRK12561 86 PRlFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAgLALALSGD 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 164 IFNYGLVSSASVNVlSSALTLV-----IIAAMTKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYFLVRMNYLIL 237
Cdd:PRK12561 166 TFTFDLAELGAKSY-PLALELLlyagfLIAFGVKLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNVQML 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 238 LSG---WSSWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVM------FFSLGMGQpfmAFFHLISHAYFKAMLF 308
Cdd:PRK12561 244 PDAhvyFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVllgiaaFTDLGISG---AMLQMISHGLIAAALF 320
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1829764509 309 MAAGSI---IHTVKdyqdLRKMGGSLINLP---ALATVCLVSNLSLCGMpflSGFYS 359
Cdd:PRK12561 321 FLTGVTyerTHTLS----IPNMGGLAKVMPktfALFTASSMASLALPGM---SGFVS 370
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
187-363 |
1.84e-04 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 44.17 E-value: 1.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 187 IAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILL---SGWSSWLLALGLFTMTMAGAAAIFE 263
Cdd:CHL00011 219 IAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPhahSIFSPWLVIVGAIQIIYAASTSLGQ 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 264 LDMKKVIALSTLSQLGvmFFSLGMGQ-----PFMAFFHLISHAYFKAMLFMAAGSI---IHTVKdyqdLRKMGGSLINLP 335
Cdd:CHL00011 299 RNLKKRIAYSSVSHMG--FIIIGIGSitdtgLNGAILQIISHGFIGAALFFLAGTSydrIRLVY----LDEMGGIAIPMP 372
|
170 180 190
....*....|....*....|....*....|.
gi 1829764509 336 ---ALATVCLVSNLSLCGMpflSGFYSKDLI 363
Cdd:CHL00011 373 kifTMFSSFSMASLALPGM---SGFVAELIV 400
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
51-88 |
6.76e-04 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 37.79 E-value: 6.76e-04
10 20 30
....*....|....*....|....*....|....*...
gi 1829764509 51 LLFDFISLIFLSTVCLISGCVFFYSVSYMGGDMFNPRF 88
Cdd:pfam00662 13 FLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
94-394 |
1.50e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 41.17 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 94 MFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYM-SEKSFNASM----LTALTNR--IGDVAILLCISLWVSCGIFN 166
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRgSGYSAEAGLkyfvLGALSSGlfLFGCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 167 YGLVSSASVNVLSSALT--LVIIAAMTKSAQIPFSAWLPAAM-AAPTPVSALVhsSTLVTAGVYFLvrmnyLILLSGWSS 243
Cdd:MTH00196 81 LVLNSGQSFSSVSVPIGylLIIVALLFKLSVAPFHMWAPDVYeGAPTKTTALL--AIVPKLGIFSI-----LVSIGLNVN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 244 WLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGVMFFSLGMGqpfmAFFHL-ISHAYFKAMLFMA--AGSIIHTVKD 320
Cdd:MTH00196 154 ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIG----SFESIqASLVYLFIYIIMSicVFSIILALNV 229
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1829764509 321 YQDLR-KMGGSLINLPALATVCLVSNLSLCGMPFLSGFYSKDLILESLFVQGpSLVVFVVSMIATGLTVVYSCRL 394
Cdd:MTH00196 230 YKNLIiEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQ-YYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
88-360 |
3.39e-03 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 40.03 E-value: 3.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 88 FAALVFMFILSMALMILSPNLISLLLGWDGLGVTSYLLVCYYMSEKSFNASMLTALTNRIGDVAILLC-ISLW--VSCGI 164
Cdd:PRK02504 112 FAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYgSSLLygLSGGS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 165 FNYGLVSSASVN----VLSSALTLVIIAAMTKSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYFLVRM---NYLI 236
Cdd:PRK02504 192 TQLSAIALALITspslGLALALVFVIAGIAFKISAVPFHQWTPDVYeGSPTPVVAFL-SVGSKAAGFALAIRLlvtAFPS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 237 LLSGWSSWLLALGLFTMTMAGAAAIFELDMKKVIALSTLSQLGvmFFSLGM------GQPFMAFfhlishaYFKAMLFMA 310
Cdd:PRK02504 271 FDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG--FVMIGLvagteaGYASMVF-------YLLAYLFMN 341
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1829764509 311 AGS----IIHTVKDYQDLRKMGGSLINLPALATVCL-VSNLSLCGMPFLSGFYSK 360
Cdd:PRK02504 342 LGAfacvILFSLRTGTDQISDYAGLYQKDPLLTLGLsLCLLSLGGIPPLAGFFGK 396
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
182-395 |
9.72e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 38.36 E-value: 9.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 182 LTLVIIAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYFLVRMNYLILlsgwSSWLLALGLFTMTMAGAAAI 261
Cdd:MTH00070 95 TIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLN----SNLLIIMGLLSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829764509 262 FELDMKKVIALSTLSQLGVMFFSLGMgQPFMAFFHLISHAYFKAMLFMAAGSIIHTvkdyqDLRKMGGSLINLPALATVC 341
Cdd:MTH00070 171 NQTQLRKIMAYSSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFLMLMNLNST-----NINKLSSSWSKNPTLTSMM 244
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1829764509 342 LVSNLSLCGMPFLSGFYSKDLILESLFVQGPSLVVFVVsMIATGLTVVYSCRLT 395
Cdd:MTH00070 245 MLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLM-ALSALLSLFFYLRLS 297
|
|
| |
