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Conserved domains on  [gi|1829529725|gb|QIV68122|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Marsupiomonas sp. NIES 1824]

Protein Classification

similar to NADH dehydrogenase I subunit H( domain architecture ID 10002943)

protein similar to NADH dehydrogenase I subunit H

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 14-319 4.04e-130

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


:

Pssm-ID: 440629  Cd Length: 329  Bit Score: 374.08  E-value: 4.04e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  14 LLALGQSLRITVPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTF 93
Cdd:COG1005     9 LITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAF 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  94 LLRMVFWSVLPLGPQSVLVDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPT 173
Cdd:COG1005    89 IPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 174 QSLNLRALVERQT-FGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMST 252
Cdd:COG1005   169 GSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1829529725 253 LCRILFLGGWLAPFPWIPFTWIPRGMWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:COG1005   249 LATTLFLGGWLGPFPILPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 14-319 4.04e-130

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 374.08  E-value: 4.04e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  14 LLALGQSLRITVPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTF 93
Cdd:COG1005     9 LITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAF 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  94 LLRMVFWSVLPLGPQSVLVDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPT 173
Cdd:COG1005    89 IPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 174 QSLNLRALVERQT-FGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMST 252
Cdd:COG1005   169 GSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1829529725 253 LCRILFLGGWLAPFPWIPFTWIPRGMWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:COG1005   249 LATTLFLGGWLGPFPILPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
14-319 2.38e-128

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 369.52  E-value: 2.38e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  14 LLALGQSLRITVPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTF 93
Cdd:PRK06076   10 LLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAF 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  94 LLRMVFWSVLPLGPQSVLVDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPT 173
Cdd:PRK06076   90 IPAFLAWAVIPFGPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLA 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 174 QSLNLRALVERQTFGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTL 253
Cdd:PRK06076  170 GSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSAL 249

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1829529725 254 CRILFLGGWLAPFPwiPFTWIPRGMWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:PRK06076  250 ITTLFLGGWLPPFP--LGGGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
NADHdh pfam00146
NADH dehydrogenase;
23-319 8.12e-123

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 354.47  E-value: 8.12e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  23 ITVPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTFLLRMVFWSV 102
Cdd:pfam00146   5 LLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAV 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 103 LPLGPQSVLVDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPTQSLNLRALV 182
Cdd:pfam00146  85 IPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIV 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 183 ERQTFGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTLCRILFLGGW 262
Cdd:pfam00146 165 EAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGW 244

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1829529725 263 LAPFPWIPFtwiprgMWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:pfam00146 245 LGPFPLPGL------LWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSL 295
 
Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 14-319 4.04e-130

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 374.08  E-value: 4.04e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  14 LLALGQSLRITVPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTF 93
Cdd:COG1005     9 LITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAF 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  94 LLRMVFWSVLPLGPQSVLVDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPT 173
Cdd:COG1005    89 IPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 174 QSLNLRALVERQT-FGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMST 252
Cdd:COG1005   169 GSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1829529725 253 LCRILFLGGWLAPFPWIPFTWIPRGMWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:COG1005   249 LATTLFLGGWLGPFPILPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
14-319 2.38e-128

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 369.52  E-value: 2.38e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  14 LLALGQSLRITVPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTF 93
Cdd:PRK06076   10 LLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAF 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  94 LLRMVFWSVLPLGPQSVLVDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPT 173
Cdd:PRK06076   90 IPAFLAWAVIPFGPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLA 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 174 QSLNLRALVERQTFGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTL 253
Cdd:PRK06076  170 GSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSAL 249

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1829529725 254 CRILFLGGWLAPFPwiPFTWIPRGMWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:PRK06076  250 ITTLFLGGWLPPFP--LGGGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
NADHdh pfam00146
NADH dehydrogenase;
23-319 8.12e-123

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 354.47  E-value: 8.12e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  23 ITVPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTFLLRMVFWSV 102
Cdd:pfam00146   5 LLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAV 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 103 LPLGPQSVLVDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPTQSLNLRALV 182
Cdd:pfam00146  85 IPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIV 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 183 ERQTFGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTLCRILFLGGW 262
Cdd:pfam00146 165 EAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGW 244

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1829529725 263 LAPFPWIPFtwiprgMWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:pfam00146 245 LGPFPLPGL------LWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSL 295
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 21-319 8.80e-109

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 319.75  E-value: 8.80e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  21 LRITVPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTFLLRMVFW 100
Cdd:MTH00054    9 LAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAW 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 101 SVLPLGPQSVLVDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPTQSLNLRA 180
Cdd:MTH00054   89 GVIPYGEGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTE 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 181 LVERQTFGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTLCRILFLG 260
Cdd:MTH00054  169 IVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLG 248

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1829529725 261 GWLapFPWIPFTWIPRGMWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:MTH00054  249 GWL--VISGPTSYFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSL 305
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 19-319 1.39e-108

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 319.37  E-value: 1.39e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  19 QSLRITVPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTFLLRMV 98
Cdd:MTH00216   11 KILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  99 FWSVLPLGPQSVLVDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPTQSLNL 178
Cdd:MTH00216   91 VWGVIPYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSI 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 179 RALVERQTFG-WYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTLCRIL 257
Cdd:MTH00216  171 TEIVLAQNNGiWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIL 250

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1829529725 258 FLGGWLAPfpwIPFTWIPRGmWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:MTH00216  251 FLGGWLSP---IKYFKGGAG-WFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSL 308
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 25-319 2.68e-98

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 293.07  E-value: 2.68e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  25 VPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTFLLRMVFWSVLP 104
Cdd:MTH00071   16 IPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLP 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 105 LgpQSVLVDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPTQSLNLRALVER 184
Cdd:MTH00071   96 M--PNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTT 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 185 QTFGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTLCRILFLGGwlA 264
Cdd:MTH00071  174 QEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGS--T 251

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1829529725 265 PFPWIPFTWIPRGMwtgLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:MTH00071  252 YNHLQPELSTMNLM---IKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITL 303
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 11-319 1.99e-96

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 288.41  E-value: 1.99e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  11 LARLLALGQSLRITVPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPR 90
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  91 LTFLLRMVFWSVLPLgPQSVLvDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVV 170
Cdd:MTH00040   81 LFLFLALLLWSLIPV-PTPTL-NVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLV 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 171 LPTQSLNLRALVERQTFGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRM 250
Cdd:MTH00040  159 IFSGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFM 238

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1829529725 251 STLCRILFLGGWLaPFPWIPFTWIprgMWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:MTH00040  239 NLLSVILFLGGGS-PFNEIFPINI---IIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSI 303
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 14-320 5.91e-96

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 287.18  E-value: 5.91e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  14 LLALGQSLRITVPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTF 93
Cdd:MTH00111    5 LLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILAL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  94 LLRMVFWSVLPLgPQSvLVDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPT 173
Cdd:MTH00111   85 LLALTIWTPLPM-PFP-LADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLS 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 174 QSLNLRALVERQTFGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTL 253
Cdd:MTH00111  163 GGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTL 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1829529725 254 CRILFLG-GWLAPFPWIpFTwiprgMWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLALT 320
Cdd:MTH00111  243 TTILFLNpSTLNLPPEL-FT-----INLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLA 304
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 21-319 6.78e-95

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 285.37  E-value: 6.78e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  21 LRITVPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTFLLRMVFW 100
Cdd:MTH00029   14 LIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAW 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 101 SVLPLGPQSVLVDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPTQSLNLRA 180
Cdd:MTH00029   94 AIVTMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISE 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 181 LVERQTFGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTLCRILFLG 260
Cdd:MTH00029  174 IVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLG 253

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 261 GWLAPF--PWIPFTWI---------PRGMWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:MTH00029  254 GWLSPLdgIPTPPEAFsifeqiassKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSL 323
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 14-319 1.38e-93

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 280.64  E-value: 1.38e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  14 LLALGQSLRITVPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTF 93
Cdd:MTH00218    2 LLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILAL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  94 LLRMVFWSVLPLgPQSvLVDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPT 173
Cdd:MTH00218   82 TLALLLWMPLPL-PFS-LINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILT 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 174 QSLNLRALVERQTFGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTL 253
Cdd:MTH00218  160 GGFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTL 239

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1829529725 254 CRILFLGGWLAPFpwipftwiprgmWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:MTH00218  240 SVILFLGTSLTTI------------NLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSL 293
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 21-319 1.80e-93

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 280.72  E-value: 1.80e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  21 LRITVPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTFLLRMVFW 100
Cdd:MTH00134   13 LAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLW 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 101 SVLPLgPQSVlVDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPTQSLNLRA 180
Cdd:MTH00134   93 APMPM-PYPV-TDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQT 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 181 LVERQTFGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTLCRILFLG 260
Cdd:MTH00134  171 FNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLG 250

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 261 GWLAP-FPWIPFTWIprgMwtgLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:MTH00134  251 ASHIPtLPELTTINL---M---TKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTL 304
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 28-319 5.12e-93

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 279.06  E-value: 5.12e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  28 LVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTFLLRMVFWSVLPLGP 107
Cdd:MTH00143   15 LLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYF 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 108 QSVLVDtpIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPTQSLNLRALVERQTF 187
Cdd:MTH00143   95 SSSYFG--WGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFS 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 188 GWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTLCRILFLGGWLAPFP 267
Cdd:MTH00143  173 VWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSVLFL 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1829529725 268 WIpftwiprGMWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:MTH00143  253 LG-------GVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSL 297
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 21-319 6.87e-91

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 274.19  E-value: 6.87e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  21 LRITVPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTFLLRMVFW 100
Cdd:MTH00104    7 LLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMW 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 101 SVLPLgPQSvLVDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPTQSLNLRA 180
Cdd:MTH00104   87 IPLPM-PYP-LINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLST 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 181 LVERQTFGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTLCRILFLG 260
Cdd:MTH00104  165 LITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLG 244

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1829529725 261 GWLAPFpwIPFTWIPRGMwtgLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:MTH00104  245 AFHNPY--MPELYTTNFT---IKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 23-319 5.96e-90

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 271.26  E-value: 5.96e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  23 ITVPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTFLLRMVFWSV 102
Cdd:MTH00193   11 LIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 103 LPLgpQSVLVDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPTQSLNLRALV 182
Cdd:MTH00193   91 YPY--LFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFM 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 183 ERQTFGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTLCRILFLGGW 262
Cdd:MTH00193  169 NYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGD 248

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1829529725 263 LAPFpwipftwiprgmWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:MTH00193  249 LLSL------------LFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 293
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 14-319 2.30e-88

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 267.38  E-value: 2.30e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  14 LLALGQSLRITVPLLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTF 93
Cdd:MTH00195    2 MISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLAL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  94 LLRMVFWSVLPLGPQSVLVDtpIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPT 173
Cdd:MTH00195   82 ALALILWVPIPSPFGFSSIN--LSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLA 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 174 QSLNLRALVERQTFGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTL 253
Cdd:MTH00195  160 GSFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVL 239

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1829529725 254 CRILFLGGWLAPFPWipftwiprgmwtgLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:MTH00195  240 TTILFLGGGGTIIVA-------------LKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLIL 292
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 27-319 1.97e-83

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 254.57  E-value: 1.97e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  27 LLVRVRMRTLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTFLLRMVFWSVLPLG 106
Cdd:MTH00225   14 LLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPSM 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 107 PQSVlvDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPTQSLNLRALVERQT 186
Cdd:MTH00225   94 FSIY--SFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQK 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 187 FGWYRIPFAPVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTLCRILFLGGwlaPF 266
Cdd:MTH00225  172 YFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGG---FF 248

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1829529725 267 PWIPFTWIPRGMWtglkasrFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:MTH00225  249 VTIDLFLILKIML-------LAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSL 294
ndhA CHL00032
NADH dehydrogenase subunit 1
 21-331 2.51e-77

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 241.01  E-value: 2.51e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  21 LRITVPLLVRVRMrtlrERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTFLLRMVFW 100
Cdd:CHL00032   38 LGITIGVLVIVWL----EREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSY 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 101 SVLPLGPQSVLVDTPIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPTQSLNLRA 180
Cdd:CHL00032  114 LVIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVD 193

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 181 LVERQT----FGW--YRIPFApvLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTLC 254
Cdd:CHL00032  194 IVEAQSkygfWGWnlWRQPIG--FIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFV 271

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 255 RILFLGGWLAPFPWIP----FTWIPRG---------MWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLALTR 321
Cdd:CHL00032  272 TVLYLGGWNLSIPYIFipelFEINKTGgvfgttigiFITLAKTYLFLFISITTRWTLPRLRMDQLLNLGWKFLLPISLGN 351

                         330
                  ....*....|
gi 1829529725 322 FWRSRSLRLL 331
Cdd:CHL00032  352 LLLTTSFQLL 361
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 35-331 4.17e-72

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 225.82  E-value: 4.17e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  35 TLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTFLLRMVFWSVLPLGPQSVLVdt 114
Cdd:MTH00010   24 TLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHPSFFL-- 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 115 PIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPTQSLNLRALVERQTFgWYRIPF 194
Cdd:MTH00010  102 KFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQYS-WILLMI 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 195 APVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTLCRILFLggwlapfPWIPFTWI 274
Cdd:MTH00010  181 IPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFT-------SFIPSIFI 253

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1829529725 275 PRgMWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLALTRFWRSRSLRLL 331
Cdd:MTH00010  254 SD-LMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFL 309
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 35-319 1.96e-58

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 189.72  E-value: 1.96e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  35 TLRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTFLLRMVFWSVLPLgpQSVLVDT 114
Cdd:MTH00090   17 TLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPY--FFDFLSF 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 115 PIGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPTQSLNLralverqtFGWYRIPF 194
Cdd:MTH00090   95 EYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSF--------VSSFSLSL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 195 APVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTLCRILFLGgwlapFPWIPFTWI 274
Cdd:MTH00090  167 FVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK-----FSFLMLFLI 241

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1829529725 275 prgmwtglkasrfLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:MTH00090  242 -------------FSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSL 273
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 36-319 1.75e-41

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 145.84  E-value: 1.75e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  36 LRERKVMASMQRRKGPNQVGPLGLLQPLADGAKLAVKEPVVPTTSSLGMFLFAPRLTFLLrMVFWSVLPLGPQSVlVDTP 115
Cdd:MTH00058   23 LGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLL-VVFYCFIYGSYYSG-SYSS 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 116 IGILFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPTQSLNLRALVErqTFGWYRIPFA 195
Cdd:MTH00058  101 LSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYY--SGWLSVLLFP 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 196 PVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTLCRILFLGGWLAPFpWIPFTwip 275
Cdd:MTH00058  179 LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFVSI-MLLFH--- 254

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1829529725 276 rgmwtglkasrfLFTYIWIRRCVPRYRYDHLMRLGWKVLLPLAL 319
Cdd:MTH00058  255 ------------LLFFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
39-315 4.98e-32

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 121.44  E-value: 4.98e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725  39 RKVMASMQRRKGPnqvgplGLLQPLADGAKLAVKEPVVPTTSSLgMFLFAPRLTFLLRMVFWSVLPLGPQSVLVDTPIGI 118
Cdd:COG0650    26 RKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASW-LFRAAPYVALAAMLLAALLVPVLTTGPPLSFSGDL 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 119 LFLFRISSLAVYGILMAGWASQSQYAFLGCLRSAAQMISYEVRIGLVVLTVVLPTQSLNLRALVERQ---TFGWYRIPFA 195
Cdd:COG0650    99 IVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQaahGPLLLSPSLL 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1829529725 196 PVLLLFFICCLAETNRAPFDLPEAEAELVAGYNVEYSSLGFALFFLGEYRNMIRMSTLCRILFlggwlapFPW-IPFTWI 274
Cdd:COG0650   179 LAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLF-------LPWgIALTLL 251

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1829529725 275 PRGMWTGLKASRFLFTYIWIRRCVPRYRYDHLMRLGWKVLL 315
Cdd:COG0650   252 LALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFL 292
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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