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Conserved domains on  [gi|1824669246|ref|YP_009740718|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Euparatettix variabilis]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-309 5.34e-135

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 384.89  E-value: 5.34e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246   6 FYLFFLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  86 LFLALFIWLVFPYSTFFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 166 VYNVGYFIYY--NIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLI 243
Cdd:MTH00193  161 SFNLLDFMNYqkYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669246 244 VLFFFGGDFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYF 309
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-309 5.34e-135

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 384.89  E-value: 5.34e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246   6 FYLFFLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  86 LFLALFIWLVFPYSTFFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 166 VYNVGYFIYY--NIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLI 243
Cdd:MTH00193  161 SFNLLDFMNYqkYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669246 244 VLFFFGGDFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYF 309
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
14-301 4.05e-97

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 288.60  E-value: 4.05e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  14 ILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFSLFLALFIW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  94 LVFPYST--FFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIGVYNVGY 171
Cdd:pfam00146  83 AVIPFGPglVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 172 FIYY--NIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLIVLFFFG 249
Cdd:pfam00146 163 IVEAqaGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1824669246 250 G------DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIF 301
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-301 1.19e-93

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 280.86  E-value: 1.19e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246   1 MYIIDFYLFFLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYF 80
Cdd:COG1005     3 LLLAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  81 SPMFSLFLALFIWLVFPYSTFFC--SLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIML 158
Cdd:COG1005    83 APILAFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLL 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 159 SLFILIGVYNVGYFIYY---NIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAM 235
Cdd:COG1005   163 GVVLLAGSLNLSEIVEAqagGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYAN 242

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1824669246 236 IIFMSFLIVLFFFGG--------DFDS----LFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIF 301
Cdd:COG1005   243 MFLVSALATTLFLGGwlgpfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
16-309 2.09e-48

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 164.88  E-value: 2.09e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  16 IILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFSLFLALFIWLV 95
Cdd:NF040610   19 LIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVA 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  96 FPYSTFF----------CSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIG 165
Cdd:NF040610   99 IPFGAVIingveyplvvTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAG 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 166 VYNVGYFIYYN--IWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLI 243
Cdd:NF040610  179 SLNIVEIVEAQspIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLV 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 244 VLFFFGG---------------DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIY 308
Cdd:NF040610  259 VLLFLGGwnlpgfvtdipvlgiILPTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIALGLY 338


                  .
gi 1824669246 309 F 309
Cdd:NF040610  339 L 339
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-309 5.34e-135

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 384.89  E-value: 5.34e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246   6 FYLFFLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  86 LFLALFIWLVFPYSTFFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 166 VYNVGYFIYY--NIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLI 243
Cdd:MTH00193  161 SFNLLDFMNYqkYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669246 244 VLFFFGGDFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYF 309
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 8-307 2.44e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 337.78  E-value: 2.44e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246   8 LFFLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFSLF 87
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  88 LALFIWLVFPYSTFFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIGVY 167
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 168 NVGYFIYYN--IWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLIVL 245
Cdd:MTH00225  162 NLFDFSYNQkyFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1824669246 246 FFFGGDFDSLFFFF--KLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKI 307
Cdd:MTH00225  242 LFFGGFFVTIDLFLilKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-305 6.57e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 328.75  E-value: 6.57e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246   7 YLFFLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFSL 86
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  87 FLALFIWLVFPYSTFFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIGV 166
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 167 YNVG--YFIYYNIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLIV 244
Cdd:MTH00143  161 FSFIeiSESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669246 245 LFFFGGDFD-----SLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGL 305
Cdd:MTH00143  241 VLFFGGSSVlfllgGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 6-309 1.64e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 323.02  E-value: 1.64e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246   6 FYLFFLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFS 85
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  86 LFLALFIWLVFPYSTFFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIG 165
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 166 VYNVGYFIYY--NIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLI 243
Cdd:MTH00218  161 GFSLEGFNLTqeTIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669246 244 VLFFFGGDFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYF 309
Cdd:MTH00218  241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 6-311 1.24e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 311.17  E-value: 1.24e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246   6 FYLFFLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFS 85
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  86 LFLALFIWLVFPYSTFFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIG 165
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 166 VYNVGYFIY--YNIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLI 243
Cdd:MTH00071  164 GFSLMNFNTtqEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1824669246 244 VLFFFGGDFD-------SLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYFLI 311
Cdd:MTH00071  244 TILFLGSTYNhlqpelsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLG 318
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 8-307 2.63e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 310.02  E-value: 2.63e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246   8 LFFLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFSLF 87
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  88 LALFIWLVFPYSTFFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIGVY 167
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 168 NVGYFIYY--NIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLIVL 245
Cdd:MTH00104  161 TLSTLITTqeHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1824669246 246 FFFGGDFD-------SLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKI 307
Cdd:MTH00104  241 LFLGAFHNpympelyTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPI 309
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 8-312 1.23e-104

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 308.44  E-value: 1.23e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246   8 LFFLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFSLF 87
Cdd:MTH00040    5 LFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  88 LALFIWLVFPYSTFFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIGVY 167
Cdd:MTH00040   85 LALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSF 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 168 NVGYFIYY--NIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLIVL 245
Cdd:MTH00040  165 SLSSISNSqnGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVI 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1824669246 246 FFFGGD--------FDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYFLIF 312
Cdd:MTH00040  245 LFLGGGspfneifpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNIL 319
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 11-296 1.41e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 308.36  E-value: 1.41e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  11 LNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFSLFLAL 90
Cdd:MTH00111    9 INPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLAL 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  91 FIWLVFPYSTFFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIGVYNVG 170
Cdd:MTH00111   89 TIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQ 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 171 YFIYY--NIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFL-IVLFF 247
Cdd:MTH00111  169 TLATTqePLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLtTILFL 248

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1824669246 248 FGGDFDSLFFFFKLVFM------SFSFLWVRGTLPRYRYDKLMYLAWKGFLPVAL 296
Cdd:MTH00111  249 NPSTLNLPPELFTINLMtktlllTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 9-309 4.11e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 307.30  E-value: 4.11e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246   9 FFLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFSLFL 88
Cdd:MTH00134    8 HIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTL 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  89 ALFIWLVFPYSTFFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIGVYN 168
Cdd:MTH00134   88 ALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFT 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 169 VGYF--IYYNIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLIVLF 246
Cdd:MTH00134  168 LQTFntAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAIL 247

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 247 FFGG-------DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYF 309
Cdd:MTH00134  248 FLGAshiptlpELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 13-301 1.42e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 295.11  E-value: 1.42e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  13 FILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFSLFLALFI 92
Cdd:MTH00195    8 FLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALIL 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  93 WLVFPYSTFFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIGVYNVgYF 172
Cdd:MTH00195   88 WVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDF-TI 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 173 IYYN---IWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLIVLFFFG 249
Cdd:MTH00195  167 MVISqgfSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLG 246

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1824669246 250 GDfDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIF 301
Cdd:MTH00195  247 GG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIP 297
NADHdh pfam00146
NADH dehydrogenase;
14-301 4.05e-97

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 288.60  E-value: 4.05e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  14 ILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFSLFLALFIW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  94 LVFPYST--FFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIGVYNVGY 171
Cdd:pfam00146  83 AVIPFGPglVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 172 FIYY--NIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLIVLFFFG 249
Cdd:pfam00146 163 IVEAqaGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1824669246 250 G------DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIF 301
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-301 1.19e-93

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 280.86  E-value: 1.19e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246   1 MYIIDFYLFFLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYF 80
Cdd:COG1005     3 LLLAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  81 SPMFSLFLALFIWLVFPYSTFFC--SLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIML 158
Cdd:COG1005    83 APILAFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLL 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 159 SLFILIGVYNVGYFIYY---NIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAM 235
Cdd:COG1005   163 GVVLLAGSLNLSEIVEAqagGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYAN 242

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1824669246 236 IIFMSFLIVLFFFGG--------DFDS----LFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIF 301
Cdd:COG1005   243 MFLVSALATTLFLGGwlgpfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 9-310 2.36e-93

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 279.36  E-value: 2.36e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246   9 FFLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFSLFL 88
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  89 ALFIWLVFPYSTFFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIGVYN 168
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 169 VGYFIYYNIWFIVICF-PLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLIVLFF 247
Cdd:MTH00010  165 FSKIIMSQYSWILLMIiPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFF 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824669246 248 FG----GDFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYFL 310
Cdd:MTH00010  245 TSfipsIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 3-309 4.57e-87

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 263.90  E-value: 4.57e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246   3 IIDFYLFFLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSP 82
Cdd:MTH00216    2 MVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAP 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  83 MFSLFLALFIWLVFPYS--TFFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSL 160
Cdd:MTH00216   82 VLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 161 FILIGVYNVGYFIYYN---IWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMII 237
Cdd:MTH00216  162 LLCVGSLSITEIVLAQnngIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHII 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 238 FMSFLIVLFFFGG--------DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYF 309
Cdd:MTH00216  242 LMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGF 321
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
6-296 2.58e-86

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 261.67  E-value: 2.58e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246   6 FYLFFLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFS 85
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  86 LFLALFIWLVFPYSTFFCSLDL--GLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFIL 163
Cdd:PRK06076   89 FIPAFLAWAVIPFGPELVIADLnvGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 164 IGVYNVGYFIYY--NIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSF 241
Cdd:PRK06076  169 AGSLNLSDIVEAqfLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1824669246 242 LIVLFFFGG----------DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVAL 296
Cdd:PRK06076  249 LITTLFLGGwlppfplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 7-309 5.36e-86

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 261.20  E-value: 5.36e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246   7 YLFFLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFSL 86
Cdd:MTH00054    2 GIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  87 FLALFIWLVFPYST--FFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILI 164
Cdd:MTH00054   82 TLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 165 GVYNVGYFIYY--NIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFL 242
Cdd:MTH00054  162 GSLNLTEIVLAqkNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTF 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824669246 243 IVLFFFGGDF----------DSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYF 309
Cdd:MTH00054  242 GVILFLGGWLvisgptsyfsNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGF 318
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-309 5.21e-72

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 226.05  E-value: 5.21e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246   1 MYIIDFYLFFLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYF 80
Cdd:MTH00029    1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  81 SPMFSLFLALFIWLV--FPYSTFFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIML 158
Cdd:MTH00029   81 APIISFTLAILAWAIvtMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIII 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 159 SLFILIGVYNVGYFIYY--NIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMI 236
Cdd:MTH00029  161 SVILCVGSLNISEIVISqrSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNI 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 237 IFMSFLIVLFFFGG-----------------------DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLP 293
Cdd:MTH00029  241 ILMSCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLP 320

                         330
                  ....*....|....*.
gi 1824669246 294 VALNYLIFFFGLKIYF 309
Cdd:MTH00029  321 LSLGLVILTAGILIGF 336
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 12-307 2.19e-60

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 193.96  E-value: 2.19e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  12 NFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFSLFLALF 91
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  92 IWLVFPYSTFFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIGVYnvgy 171
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSF---- 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 172 fiYYNIWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLIVLFFFGgd 251
Cdd:MTH00090  157 --SFVSSFSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK-- 232

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1824669246 252 fdslFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKI 307
Cdd:MTH00090  233 ----FSFLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 10-303 5.79e-50

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 167.41  E-value: 5.79e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  10 FLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFSLFLA 89
Cdd:MTH00058    4 LVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLV 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  90 LFIWLVFPYSTFFCSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIGVYNV 169
Cdd:MTH00058   84 VFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSL 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 170 gYFIYYNIWFIVICFPL-FLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLIVLFFF 248
Cdd:MTH00058  164 -VDFYYSGWLSVLLFPLiYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFF 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1824669246 249 GGDFDSLFFFFKLVFmsfsFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFF 303
Cdd:MTH00058  243 GGGFVSIMLLFHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
16-309 2.09e-48

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 164.88  E-value: 2.09e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  16 IILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFSLFLALFIWLV 95
Cdd:NF040610   19 LIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVA 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  96 FPYSTFF----------CSLDLGLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIG 165
Cdd:NF040610   99 IPFGAVIingveyplvvTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAG 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 166 VYNVGYFIYYN--IWFIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIFMSFLI 243
Cdd:NF040610  179 SLNIVEIVEAQspIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLV 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 244 VLFFFGG---------------DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIY 308
Cdd:NF040610  259 VLLFLGGwnlpgfvtdipvlgiILPTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIALGLY 338


                  .
gi 1824669246 309 F 309
Cdd:NF040610  339 L 339
ndhA CHL00032
NADH dehydrogenase subunit 1
 10-310 1.75e-36

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 133.92  E-value: 1.75e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  10 FLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGVLQPFGDAIKLFSSEQVLPYVSNYFLYYFSPMFSLFLA 89
Cdd:CHL00032   30 LVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISI 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  90 LFIWLVFPYSTFFCSLDL--GLLFILCVMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFIL---- 163
Cdd:CHL00032  110 LLSYLVIPFGYHLVLADLsiGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLsnsl 189

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 164 ----IGVYNVGY-FIYYNIWFIVICFPLFLCfygSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEYAMIIF 238
Cdd:CHL00032  190 stvdIVEAQSKYgFWGWNLWRQPIGFIVFLI---SSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLV 266

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 239 MSFLIVLFFFGGDFDSLFFFFKLVFM---------------------SFSFLWV----RGTLPRYRYDKLMYLAWKGFLP 293
Cdd:CHL00032  267 SSLFVTVLYLGGWNLSIPYIFIPELFeinktggvfgttigifitlakTYLFLFIsittRWTLPRLRMDQLLNLGWKFLLP 346

                         330
                  ....*....|....*..
gi 1824669246 294 VALNYLIFFFGLKIYFL 310
Cdd:CHL00032  347 ISLGNLLLTTSFQLLSL 363
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
10-303 3.98e-29

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 112.97  E-value: 3.98e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  10 FLNFILIILMVLLSVAFLTLLERKVLGYVQLRKGPnkvgycGVLQPFGDAIKLFSSEQVLPYVSNyFLYYFSPMFSL--- 86
Cdd:COG0650     4 ILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVALaam 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246  87 -FLALFIWLVFPYSTFFCSLDLGLLFILcvMSLGVYGLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMLSLFILIG 165
Cdd:COG0650    77 lLAALLVPVLTTGPPLSFSGDLIVLVYL--LALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAG 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669246 166 VYNVGYFIYYNIW-----FIVICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGASFALIFLAEY-AMIIFM 239
Cdd:COG0650   155 STSLSDIVAYQAAhgpllLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAAlKLFVLL 234

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1824669246 240 SFLIVLFFFGG-----DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFF 303
Cdd:COG0650   235 SLFVNLFLPWGialtlLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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