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Conserved domains on  [gi|1824669226|ref|YP_009740699|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Euparatettix bimaculatus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 15-115 4.49e-28

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 98.70  E-value: 4.49e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  15 PIFMMTISMFISKKMISDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIKYWWISTS 94
Cdd:MTH00161   13 SIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSS 92

                          90       100
                  ....*....|....*....|.
gi 1824669226  95 MFIMILLLGIYYEWNQGMLKW 115
Cdd:MTH00161   93 FFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 15-115 4.49e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 98.70  E-value: 4.49e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  15 PIFMMTISMFISKKMISDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIKYWWISTS 94
Cdd:MTH00161   13 SIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSS 92

                          90       100
                  ....*....|....*....|.
gi 1824669226  95 MFIMILLLGIYYEWNQGMLKW 115
Cdd:MTH00161   93 FFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.32e-19

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 76.69  E-value: 1.32e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  19 MTISMFISKKmISDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIkYWWISTSMFIM 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGW-FGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1824669226  99 ILLLGIYYEWNQGMLK 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 15-115 1.83e-17

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 71.69  E-value: 1.83e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  15 PIFMMTISMFISKKMiSDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIkYWWISTS 94
Cdd:COG0838    19 ALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGW-FGLIEML 96

                          90       100
                  ....*....|....*....|.
gi 1824669226  95 MFIMILLLGIYYEWNQGMLKW 115
Cdd:COG0838    97 VFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 15-115 4.49e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 98.70  E-value: 4.49e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  15 PIFMMTISMFISKKMISDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIKYWWISTS 94
Cdd:MTH00161   13 SIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSS 92

                          90       100
                  ....*....|....*....|.
gi 1824669226  95 MFIMILLLGIYYEWNQGMLKW 115
Cdd:MTH00161   93 FFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 4.54e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 96.47  E-value: 4.54e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226   1 MLTMIMNMMISSMIPIFMMTISMFISKKMISDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPI 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1824669226  81 MKMSSIKYWWISTSMFIMILLLGIYYEWNQGMLKWA 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 9.66e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 92.75  E-value: 9.66e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226   1 MLTMIMNMMISSMIPIFMMTISMFISKKMISDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPI 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1824669226  81 MKMSSIKYWWISTSMFIMILLLGIYYEWNQGMLKWA 116
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-117 2.98e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 79.13  E-value: 2.98e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226   1 MLTMIMNMMISSMIPIFMMTISMFISKKMISDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPI 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1824669226  81 MKMSSIKYWWISTSMFIMILLLGIYYEWNQGMLKWAT 117
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWSS 117
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 31-116 3.48e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 78.87  E-value: 3.48e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  31 SDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIKYWWISTSMFIMILLLGIYYEWNQ 110
Cdd:MTH00042   30 PDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLITNPSTLLPISLIFLIILTIGLVYEWVN 109


                  ....*.
gi 1824669226 111 GMLKWA 116
Cdd:MTH00042  110 GGLEWA 115
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 15-116 7.82e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 77.61  E-value: 7.82e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  15 PIFMMTISMFISKkMISDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIKYWWISTS 94
Cdd:MTH00113   14 STILTTLNFWLTQ-TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTTTLTWAT 92

                          90       100
                  ....*....|....*....|..
gi 1824669226  95 MFIMILLLGIYYEWNQGMLKWA 116
Cdd:MTH00113   93 IILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 29-116 8.47e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 77.65  E-value: 8.47e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  29 MISDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIKYWWISTSMFIMILLLGIYYEW 108
Cdd:MTH00136   28 MTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLTFFWATAVLILLTLGLIYEW 107


                  ....*...
gi 1824669226 109 NQGMLKWA 116
Cdd:MTH00136  108 LQGGLEWA 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.32e-19

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 76.69  E-value: 1.32e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  19 MTISMFISKKmISDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIkYWWISTSMFIM 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGW-FGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1824669226  99 ILLLGIYYEWNQGMLK 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 16-116 9.26e-19

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 75.03  E-value: 9.26e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  16 IFMMTISMFISKKMIS----------DREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSS 85
Cdd:MTH00069    3 MLMLLISTILSLILITisfwlplnnpDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNT 82

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1824669226  86 IKYWWISTSMFIMILLLGIYYEWNQGMLKWA 116
Cdd:MTH00069   83 PTNTLFWSTLILILLTLGLIYEWIQGGLEWA 113
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 15-116 2.76e-18

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 74.13  E-value: 2.76e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  15 PIFMMTISMFISKKMiSDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIKYWWiSTS 94
Cdd:PRK06602   22 GILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWLGFV-EAM 99

                          90       100
                  ....*....|....*....|..
gi 1824669226  95 MFIMILLLGIYYEWNQGMLKWA 116
Cdd:PRK06602  100 IFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-115 4.25e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 73.39  E-value: 4.25e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226   1 MLTMIMNMMISSMIPIFMMTISMFiSKKMISDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPI 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIAFW-LPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1824669226  81 MKMSSIKYWWIstSMFIMILLLGIYYEWNQGMLKW 115
Cdd:MTH00203   80 NQLSSLSLLLA--FLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 34-116 1.67e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 71.89  E-value: 1.67e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  34 EKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIKYWWISTSMFIMILLLGIYYEWNQGML 113
Cdd:MTH00106   32 EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALSLAYEWTQKGL 111


                  ...
gi 1824669226 114 KWA 116
Cdd:MTH00106  112 EWT 114
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 15-115 1.83e-17

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 71.69  E-value: 1.83e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  15 PIFMMTISMFISKKMiSDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIkYWWISTS 94
Cdd:COG0838    19 ALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGW-FGLIEML 96

                          90       100
                  ....*....|....*....|.
gi 1824669226  95 MFIMILLLGIYYEWNQGMLKW 115
Cdd:COG0838    97 VFIAILLVGLIYAWKKGALEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 22-115 4.63e-14

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 63.16  E-value: 4.63e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  22 SMFISKKmISDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIKYWWIsTSMFIMILL 101
Cdd:MTH00018   21 SYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFGFWT-MVGFLFILT 98

                          90
                  ....*....|....
gi 1824669226 102 LGIYYEWNQGMLKW 115
Cdd:MTH00018   99 LGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-115 6.24e-13

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 60.11  E-value: 6.24e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  32 DREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIKYWWIsTSMFIMILLLGIYYEWNQG 111
Cdd:MTH00055   35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWV-MYLFLIILTIGLIYEWVKG 113


                  ....
gi 1824669226 112 MLKW 115
Cdd:MTH00055  114 GLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 3.08e-12

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 58.79  E-value: 3.08e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  32 DREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIKYWWISTSmFIMILLLGIYYEWNQG 111
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSFWIVYT-FLIVLAIGLAYEWIKG 118


                  ....
gi 1824669226 112 MLKW 115
Cdd:MTH00030  119 GLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 15-115 1.56e-07

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 46.13  E-value: 1.56e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  15 PIFMMTISMFISKKMiSDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIkYWWISTS 94
Cdd:CHL00022   21 PILAFLISGLLAPIS-KGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGV-SAFIEAL 98

                          90       100
                  ....*....|....*....|.
gi 1824669226  95 MFIMILLLGIYYEWNQGMLKW 115
Cdd:CHL00022   99 IFVLILIVGLVYAWRKGALEW 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
21-115 6.81e-07

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 44.66  E-value: 6.81e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  21 ISMFISKKMIS---DREKSSPFECGFNPkTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIkYWWISTSMFI 97
Cdd:PRK08489   30 LARFISRKLAQkntEKLKLAIYECGPEP-VKQPNRISSHFYIMALLFILFDVEIVFMFPWAVDFKLLGL-FGLIEMLLFI 107

                          90
                  ....*....|....*...
gi 1824669226  98 MILLLGIYYEWNQGMLKW 115
Cdd:PRK08489  108 VLLTIGFIYAWKKGALEW 125
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
15-115 7.97e-07

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 44.35  E-value: 7.97e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  15 PIFMMTISMFISKKMISDrEKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIkYWWISTS 94
Cdd:PRK07756   23 PVVALTLGRMLRPNKPSA-AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGL-FALIEML 100

                          90       100
                  ....*....|....*....|.
gi 1824669226  95 MFIMILLLGIYYEWNQGMLKW 115
Cdd:PRK07756  101 IFVVMLLVGLAYAWKKKVLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 16-115 2.27e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 37.73  E-value: 2.27e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  16 IFMMTISMFISKKMIsDREKSSPFECGFNPKTRARLP--FSIQFFMISMLFLIFDVEIVLIIPLIPIMKMSSIkYWWIST 93
Cdd:PRK07928   19 VVSVVVASLVGPKRY-NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGV-FGLVEM 96

                          90       100
                  ....*....|....*....|..
gi 1824669226  94 SMFIMILLLGIYYEWNQGMLKW 115
Cdd:PRK07928   97 ALFMLTVFVAYAYVWRRGGLEW 118
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 31-115 1.78e-03

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 35.94  E-value: 1.78e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669226  31 SDREKSSPFECGFNPKTRARLPFSIQFFMISMLFLIFDVEIVLIIPLIPIMK-MSSIKYwwISTSMFIMILLLGIYYEWN 109
Cdd:PRK06432   59 SDQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKrLGLIPF--IETLIFLAMPLFAVYYAFK 136


                  ....*.
gi 1824669226 110 QGMLKW 115
Cdd:PRK06432  137 MGYMRW 142
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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