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Conserved domains on  [gi|1824665869|ref|YP_009740809|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Sinopodisma lushiensis]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 18-310 1.69e-147

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 416.48  E-value: 1.69e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  18 CVLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPY 97
Cdd:MTH00193   14 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPY 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  98 LTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQIY 177
Cdd:MTH00193   94 LFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKY 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 178 CWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGGDFYSFM 257
Cdd:MTH00193  174 IWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLL 253

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1824665869 258 FFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGLKILL 310
Cdd:MTH00193  254 FYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 18-310 1.69e-147

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 416.48  E-value: 1.69e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  18 CVLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPY 97
Cdd:MTH00193   14 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPY 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  98 LTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQIY 177
Cdd:MTH00193   94 LFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKY 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 178 CWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGGDFYSFM 257
Cdd:MTH00193  174 IWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLL 253

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1824665869 258 FFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGLKILL 310
Cdd:MTH00193  254 FYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
18-302 6.72e-97

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 288.22  E-value: 6.72e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  18 CVLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPY 97
Cdd:pfam00146   8 PLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPF 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  98 LTYM--CSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQ 175
Cdd:pfam00146  88 GPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQ 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 176 IYCWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGG---- 251
Cdd:pfam00146 168 AGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwlgp 247

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1824665869 252 --DFYSFMFFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIF 302
Cdd:pfam00146 248 fpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 19-301 1.34e-89

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 270.46  E-value: 1.34e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  19 VLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPYL 98
Cdd:COG1005    22 LLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFG 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  99 TYMC--SFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQI 176
Cdd:COG1005   102 PGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQA 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 177 -YCWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGG---- 251
Cdd:COG1005   182 gGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGwlgp 261

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1824665869 252 ----DFYS----FMFFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSL-NFFI 301
Cdd:COG1005   262 fpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLvNLVL 320
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
19-310 4.77e-46

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 158.71  E-value: 4.77e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  19 VLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFP-- 96
Cdd:NF040610   23 VFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVAIPfg 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  97 --------YLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNM 168
Cdd:NF040610  103 aviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNI 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 169 LNFMSYQIYCWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIF 248
Cdd:NF040610  183 VEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLLF 262

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824665869 249 LGG-------------DFYSFM--FFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGLKILL 310
Cdd:NF040610  263 LGGwnlpgfvtdipvlGIILPTlfFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIALGLYL 339
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 18-310 1.69e-147

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 416.48  E-value: 1.69e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  18 CVLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPY 97
Cdd:MTH00193   14 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPY 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  98 LTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQIY 177
Cdd:MTH00193   94 LFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKY 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 178 CWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGGDFYSFM 257
Cdd:MTH00193  174 IWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLL 253

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1824665869 258 FFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGLKILL 310
Cdd:MTH00193  254 FYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 18-308 3.21e-128

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 367.82  E-value: 3.21e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  18 CVLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPY 97
Cdd:MTH00225   13 CLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPS 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  98 LTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQIY 177
Cdd:MTH00225   93 MFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQKY 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 178 CWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGGDFY--S 255
Cdd:MTH00225  173 FWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGFFVtiD 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1824665869 256 FMFFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGLKI 308
Cdd:MTH00225  253 LFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 18-306 6.15e-121

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 349.55  E-value: 6.15e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  18 CVLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPY 97
Cdd:MTH00143   13 CVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPS 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  98 LTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQIY 177
Cdd:MTH00143   93 YFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFS 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 178 CWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGGDF---- 253
Cdd:MTH00143  173 VWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSvlfl 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1824665869 254 -YSFMFFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGL 306
Cdd:MTH00143  253 lGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 18-313 3.74e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 306.84  E-value: 3.74e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  18 CVLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPY 97
Cdd:MTH00218   14 PVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPL 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  98 LTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQIY 177
Cdd:MTH00218   94 PFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQET 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 178 CWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGGDFYSFM 257
Cdd:MTH00218  174 IWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLTTIN 253

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1824665869 258 FFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGLKILLISI 313
Cdd:MTH00218  254 LMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASL 309
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 19-313 1.30e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 305.78  E-value: 1.30e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  19 VLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPYL 98
Cdd:MTH00071   18 VLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMP 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  99 TYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQIYC 178
Cdd:MTH00071   98 NNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFM 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 179 WFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGGDFYSFM- 257
Cdd:MTH00071  178 WLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNHLQp 257

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1824665869 258 ------FFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGLKILLISI 313
Cdd:MTH00071  258 elstmnLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGI 319
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 18-310 4.64e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 303.97  E-value: 4.64e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  18 CVLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPY 97
Cdd:MTH00195   14 PVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPS 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  98 LTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQIY 177
Cdd:MTH00195   94 PFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGF 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 178 CWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGGDfYSFM 257
Cdd:MTH00195  174 SWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGG-GTII 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1824665869 258 FFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGLKILL 310
Cdd:MTH00195  253 VALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 19-313 2.36e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 297.69  E-value: 2.36e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  19 VLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPYL 98
Cdd:MTH00104   13 ILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPLPMP 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  99 TYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQIYC 178
Cdd:MTH00104   93 YPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 179 WFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGG------- 251
Cdd:MTH00104  173 WLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAfhnpymp 252

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1824665869 252 DFYSFMFFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGLKILLISI 313
Cdd:MTH00104  253 ELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 19-313 2.47e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 297.58  E-value: 2.47e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  19 VLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPYL 98
Cdd:MTH00111   18 ILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMP 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  99 TYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQIYC 178
Cdd:MTH00111   98 FPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPL 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 179 WFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFL-------GG 251
Cdd:MTH00111  178 WLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLnpstlnlPP 257

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1824665869 252 DFYSFMFFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGLKILLISI 313
Cdd:MTH00111  258 ELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGL 319
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 19-310 8.71e-98

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 291.11  E-value: 8.71e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  19 VLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPYL 98
Cdd:MTH00040   17 VLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVP 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  99 TYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQIYC 178
Cdd:MTH00040   97 TPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGS 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 179 WFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGGDFYSFMF 258
Cdd:MTH00040  177 WLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGGGSPFNEI 256

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 259 F--------IKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGLKILL 310
Cdd:MTH00040  257 FpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
NADHdh pfam00146
NADH dehydrogenase;
18-302 6.72e-97

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 288.22  E-value: 6.72e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  18 CVLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPY 97
Cdd:pfam00146   8 PLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPF 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  98 LTYM--CSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQ 175
Cdd:pfam00146  88 GPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQ 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 176 IYCWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGG---- 251
Cdd:pfam00146 168 AGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwlgp 247

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1824665869 252 --DFYSFMFFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIF 302
Cdd:pfam00146 248 fpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 20-311 3.47e-93

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 278.97  E-value: 3.47e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  20 LISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPYLT 99
Cdd:MTH00010   17 LLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKH 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 100 YMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQiYCW 179
Cdd:MTH00010   97 PSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQ-YSW 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 180 FIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGGDFYSF--- 256
Cdd:MTH00010  176 ILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSFIPSIFisd 255

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1824665869 257 -MFFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGLKILLI 311
Cdd:MTH00010  256 lMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 19-313 8.60e-93

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 278.41  E-value: 8.60e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  19 VLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPYL 98
Cdd:MTH00134   19 VLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMP 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  99 TYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQIYC 178
Cdd:MTH00134   99 YPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESI 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 179 WFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGGDFYSFM- 257
Cdd:MTH00134  179 WLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPTLp 258

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1824665869 258 ------FFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGLKILLISI 313
Cdd:MTH00134  259 elttinLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGL 320
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 19-301 1.34e-89

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 270.46  E-value: 1.34e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  19 VLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPYL 98
Cdd:COG1005    22 LLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFG 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  99 TYMC--SFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQI 176
Cdd:COG1005   102 PGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQA 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 177 -YCWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGG---- 251
Cdd:COG1005   182 gGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGwlgp 261

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1824665869 252 ----DFYS----FMFFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSL-NFFI 301
Cdd:COG1005   262 fpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLvNLVL 320
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 18-308 6.41e-86

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 260.82  E-value: 6.41e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  18 CVLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPY 97
Cdd:MTH00054   14 PLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPY 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  98 LT--YMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQ 175
Cdd:MTH00054   94 GEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQ 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 176 IYCWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGGDFYS 255
Cdd:MTH00054  174 KNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLVI 253

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1824665869 256 F----------MFFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGLKI 308
Cdd:MTH00054  254 SgptsyfsnfvWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILI 316
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
19-297 1.05e-83

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 255.12  E-value: 1.05e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  19 VLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPYL 98
Cdd:PRK06076   23 VLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFG 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  99 TY--MCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQI 176
Cdd:PRK06076  103 PElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQF 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 177 YCWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGG----- 251
Cdd:PRK06076  183 LSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGwlppf 262

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1824665869 252 -----DFYSFMFFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:PRK06076  263 plgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-306 2.98e-82

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 251.58  E-value: 2.98e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869   1 MFYDLFMFILNFLLLLICVLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFS 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  81 PVFNLMISLIIWIIFPYL--TYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMS 158
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 159 LIILIGSFNMLNFMSYQI-YCWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASI 237
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824665869 238 IFMSMFLTLIFLGG--------DFYSFMFFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGL 306
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 19-308 4.63e-69

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 218.35  E-value: 4.63e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  19 VLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWII--FP 96
Cdd:MTH00029   20 LLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIvtMD 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  97 YLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQI 176
Cdd:MTH00029  100 QGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQR 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 177 YCWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGG----- 251
Cdd:MTH00029  180 SVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGwlspl 259

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1824665869 252 ------------------DFYSFMFFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGLKI 308
Cdd:MTH00029  260 dgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 18-308 2.61e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 204.36  E-value: 2.61e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  18 CVLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPY 97
Cdd:MTH00090    8 FILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPY 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  98 LTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYqiy 177
Cdd:MTH00090   88 FFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVSSFSL--- 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 178 cWFIIISFPLFLacfaSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLggDFYSFM 257
Cdd:MTH00090  165 -SLFVIYLPFLI----MIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF--KFSFLM 237

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1824665869 258 FFIKLTIVIFsfiwVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGLKI 308
Cdd:MTH00090  238 LFLIFSLLIF----IRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 19-304 2.16e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 163.56  E-value: 2.16e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  19 VLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFPYL 98
Cdd:MTH00058   14 ILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSY 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  99 TYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYqiyC 178
Cdd:MTH00058   94 YSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYS---G 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 179 WFIIISFPLFLACFASC-LAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGGDFYSFM 257
Cdd:MTH00058  171 WLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFVSIM 250

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1824665869 258 FFIKLtiviFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFI 304
Cdd:MTH00058  251 LLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
19-310 4.77e-46

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 158.71  E-value: 4.77e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  19 VLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSPVFNLMISLIIWIIFP-- 96
Cdd:NF040610   23 VFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVAIPfg 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  97 --------YLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNM 168
Cdd:NF040610  103 aviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNI 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 169 LNFMSYQIYCWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIF 248
Cdd:NF040610  183 VEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLLF 262

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824665869 249 LGG-------------DFYSFM--FFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGLKILL 310
Cdd:NF040610  263 LGGwnlpgfvtdipvlGIILPTlfFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIALGLYL 339
ndhA CHL00032
NADH dehydrogenase subunit 1
 19-297 9.58e-32

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 121.21  E-value: 9.58e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  19 VLISVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPLSDALKLICKEQPIPILSNYLLYYFSP---VFNLMISLIIwIIF 95
Cdd:CHL00032   40 ITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPsiaVISILLSYLV-IPF 118

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  96 PYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFM--- 172
Cdd:CHL00032  119 GYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVeaq 198

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 173 -SYQIYCWFIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGG 251
Cdd:CHL00032  199 sKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 278

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1824665869 252 -----------DFYS--------------FMFFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:CHL00032  279 wnlsipyifipELFEinktggvfgttigiFITLAKTYLFLFISITTRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
25-304 1.19e-23

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 98.33  E-value: 1.19e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869  25 FLTLLERKVLGYIQIRKGPnkvgfaGIPQPLSDALKLICKEQPIPILSNyLLYYFSPVFNLMISLIIWIIFPYLTYMCSF 104
Cdd:COG0650    20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVALAAMLLAALLVPVLTTGPPL 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 105 SYG--FLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILMSLIILIGSFNMLNFMSYQI---YCW 179
Cdd:COG0650    93 SFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAahgPLL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824665869 180 FIIISFPLFLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYASIIFMSMFLTLIFLGGDFYSFM-- 257
Cdd:COG0650   173 LSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFLPWGIALTLll 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1824665869 258 ----FFIKLTIVIFSFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFI 304
Cdd:COG0650   253 alllFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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