|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-441 |
6.98e-137 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 400.30 E-value: 6.98e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 1 MLMFIFSLLFMIPLSLL-NSWWAVQFWFFFLSFMFIFFGDFSFFVTNLGFGMGVDFFSWLMILLSFWICSLMIMSSCSIK 79
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLkNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 80 FSFYFSDIFMLIVLLLMLSLYVSFSVINLFNFYLFFEFSLIPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILW 159
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 160 MEGHIGGLCYYLFFDLFG-GVYFYLAMILAFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFKCMVF 238
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSlNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 239 YSLNFNFYIILLSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNI 318
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 319 SYERLGSRLFILNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSYYTMFFLFFLSFFSCVYSLYLYS 398
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1824661659 399 FSQHGCFYSGLYSVSSCYLIEFHLIFLHWFPLNIMFMCCDYYL 441
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
47-439 |
1.59e-119 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 354.92 E-value: 1.59e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 47 LGFGMGVDFFSWLMILLSFWICSLMIMSSCSIKFSFYFSDIFMLIVLLLMLSLYVSFSVINLFNFYLFFEFSLIPTLMLI 126
Cdd:MTH00150 16 LSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 127 LGWGYQPERVSASMYLIFYTVAASLPLLSCILWMEGHIG----GLCYYLFFDLFGGVYFYLAMILAFLIKLPMYMFHLWL 202
Cdd:MTH00150 96 LGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGssfmLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 203 PKAHVEAPISGSMILAGVLLKLGGYGLIRVFKCMVFYSLNFNFYIILLSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSL 282
Cdd:MTH00150 176 PKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSL 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 283 VISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISYMPSMSLWWFMLSACNMSAPPSLNLI 362
Cdd:MTH00150 256 VLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLL 335
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824661659 363 GEISLLNGLISYSYYTMFFLFFLSFFSCVYSLYLYSFSQHGCFYSGLYSVSSCYLIEFHLIFLHWFPLNIMFMCCDY 439
Cdd:MTH00150 336 SEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDL 412
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-435 |
6.01e-107 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 323.85 E-value: 6.01e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 1 MLMFIFSLLFMIPLSLLNSWWAV--QFWFFFLSFMFIFFGDFSFFVTNLGFGMGVDFFSWLMILLSFWICSLMIMSSCSI 78
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFfsNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 79 KFSFYFSDIFMLIVLLLMLSLYVSFSVINLFNFYLFFEFSLIPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCIL 158
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 159 WMEGHIGGLCYYLFFDLFGGVY----FYLAMILAFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFK 234
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFylflYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 235 CMVFYSLNFNFYIILLSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFC 314
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 315 LSNISYERLGSRLFILNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSYYTMFFLFFLSFFSCVYSL 394
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1824661659 395 YLYSFSQHGCFYSGLYSVSSCYLIEFHLIFLHWFPLNIMFM 435
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILIL 441
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-438 |
1.77e-105 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 320.15 E-value: 1.77e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 1 MLMFIFSLLFMIPLSLLNSWWAVQFWFFFLSFMFIFFGDFSFFVT----NLGFGMGVDFFSWLMILLSFWICSLMIMSSC 76
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSapysMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 77 SIKFSFYFSDIFMLIVLLLMLSLYVSFSVINLFNFYLFFEFSLIPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSC 156
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 157 ILWMEGHIGGLCYYLFFDLFGGVYFY----LAMILAFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRV 232
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSSMEPPSIYLMnlwwLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 233 FKCMVFYSLNFNFYIILLSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGL 312
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 313 FCLSNISYERLGSRLFILNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSYYTMFFLFFLSFFSCVY 392
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1824661659 393 SLYLYSFSQHGCFYSGLYSVSSCYLIEFHLIFLHWFPLNIMFMCCD 438
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPD 446
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
45-403 |
1.31e-99 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 305.20 E-value: 1.31e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 45 TNLGFGMGVDFFSWLMILLSFWICSLMIMSSCS--IKFSFYFSDIFMLIVLLLMLSLYVSFSVINLFNFYLFFEFSLIPT 122
Cdd:MTH00124 50 KNLTQWLGIDQISAPLLVLSCWLLPLMILASQNhlQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPT 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 123 LMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILWMEGHIGGLCYYLFFDL-------FGGVYFYLAMILAFLIKLPM 195
Cdd:MTH00124 130 LILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLQLThptltnsWTNLLLWLACLMAFMVKMPL 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 196 YMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFKCMVFYSLNFNFYIILLSLYGGLMVSLICLRQLDLKMLIAYS 275
Cdd:MTH00124 210 YGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYS 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 276 SVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISYMPSMSLWWFMLSACNMSA 355
Cdd:MTH00124 290 SVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMAL 369
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1824661659 356 PPSLNLIGEISLLNGLISYSYYTMFFLFFLSFFSCVYSLYLYSFSQHG 403
Cdd:MTH00124 370 PPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRG 417
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-430 |
1.92e-95 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 294.15 E-value: 1.92e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 1 MLMFIFSLLFMIPLSLLNSWWAVQFWFFFLSFMFIFFGDFSFFVTNLGFGMGVDFFSWLMILLSFWICSLMIMSSCSI-- 78
Cdd:MTH00206 5 PLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHmk 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 79 KFSFYFSDIFMLIVLLLMLSLYVSFSVINLFNFYLFFEFSLIPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCIL 158
Cdd:MTH00206 85 NEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 159 WMEGHIGGLCYYLFFDLFGGVYF----YLAMILAFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFK 234
Cdd:MTH00206 165 FLQNSLGSLSLYILYFSKLTTWNnnlwWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIIL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 235 CMVFYSLNFNFYIILLSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFC 314
Cdd:MTH00206 245 ILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFC 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 315 LSNISYERLGSRLFILNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSYYTMFFLFFLSFFSCVYSL 394
Cdd:MTH00206 325 LANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSL 404
|
410 420 430
....*....|....*....|....*....|....*.
gi 1824661659 395 YLYSFSQHGCFYSGLYSVSSCYLIEFHLIFLHWFPL 430
Cdd:MTH00206 405 YMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPV 440
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
51-436 |
7.47e-92 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 285.27 E-value: 7.47e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 51 MGVDFFSWLMILLSFWICSLMIMSSCS--IKFSFYFSDIFMLIVLLLMLSLYVSFSVINLFNFYLFFEFSLIPTLMLILG 128
Cdd:MTH00068 56 FGIDQISSPLLILTCWLLPLMILASQNhlKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITR 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 129 WGYQPERVSASMYLIFYTVAASLPLLSCILWMEGHIGGLCYYLFFDL-------FGGVYFYLAMILAFLIKLPMYMFHLW 201
Cdd:MTH00068 136 WGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLELMspmqlmtYTNKIWWLACLLAFMVKMPLYGLHLW 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 202 LPKAHVEAPISGSMILAGVLLKLGGYGLIRVFKCMVFYSLNFNFYIILLSLYGGLMVSLICLRQLDLKMLIAYSSVSHMS 281
Cdd:MTH00068 216 LPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMG 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 282 LVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISYMPSMSLWWFMLSACNMSAPPSLNL 361
Cdd:MTH00068 296 LVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNL 375
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1824661659 362 IGEISLLNGLISYSYYTMFFLFFLSFFSCVYSLYLYSFSQHGCFYSGLYSVSSCYLIEFHLIFLHWFPLnIMFMC 436
Cdd:MTH00068 376 WGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPM-LLLIL 449
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
46-430 |
1.04e-90 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 282.25 E-value: 1.04e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 46 NLGFGMGVDFFSWLMILLSFWICSLMIMSSCSI--KFSFYFSDIFMLIVLLLMLSLYVSFSVINLFNFYLFFEFSLIPTL 123
Cdd:MTH00044 52 NLSLSLATDSLSSPLIILSCWLAPLSLLASINHlsNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 124 MLILGWGYQPERVSASMYLIFYTVAASLPLLSCILWMEGHIGGLCYYLFFDLFGGVYF-------YLAMILAFLIKLPMY 196
Cdd:MTH00044 132 ILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSsnsssiwWIFCILAFLVKMPIY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 197 MFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFKCMVFYSLNF-NFYIILLSLYGGLMVSLICLRQLDLKMLIAYS 275
Cdd:MTH00044 212 GFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYS 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 276 SVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISYMPSMSLWWFMLSACNMSA 355
Cdd:MTH00044 292 SVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGL 371
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1824661659 356 PPSLNLIGEISLLNGLISYSYYTMFFLFFLSFFSCVYSLYLYSFSQHGCFYSGLYSVSSCYLIEFHLIFLHWFPL 430
Cdd:MTH00044 372 PPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPL 446
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
60-430 |
8.50e-85 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 267.14 E-value: 8.50e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 60 MILLSFWICSLMIMSSCS--IKFSFYFSDIFMLIVLLLMLSLYVSFSVINLFNFYLFFEFSLIPTLMLILGWGYQPERVS 137
Cdd:MTH00110 65 LLILTTWLLPLMLMASQHhlSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLN 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 138 ASMYLIFYTVAASLPLLSCILWMEGHIGGL-------CYYLFFDLFGGVYFYLAMILAFLIKLPMYMFHLWLPKAHVEAP 210
Cdd:MTH00110 145 AGLYFLFYTLVGSLPLLVALLYIQNNLGSLnflllqlWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAP 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 211 ISGSMILAGVLLKLGGYGLIRVFKCMVFYSLNFNFYIILLSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSM 290
Cdd:MTH00110 225 IAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQ 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 291 NVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNG 370
Cdd:MTH00110 305 TPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMS 384
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 371 LISYSYYTMFFLFFLSFFSCVYSLYLYSFSQHGCFYSGLYSVSSCYLIEFHLIFLHWFPL 430
Cdd:MTH00110 385 SFSWSNITIILMGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPL 444
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
45-430 |
2.71e-79 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 252.95 E-value: 2.71e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 45 TNLGFGMGVDFFSWLMILLSFWICSLMIMSSCSIKFSFYFSD--IFMLIVLLLMLSLYVSFSVINLFNFYLFFEFSLIPT 122
Cdd:MTH00127 51 SSLNLYMATDPLSTPLLVLTCWLLPLMILASQNHTAPEPINRqrMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPT 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 123 LMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILWMEGHIGGLCY-------YLFFDLFGGVYFYLAMILAFLIKLPM 195
Cdd:MTH00127 131 LIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMltlqysqPLQLSSWADKLWWAGCLLAFLVKMPL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 196 YMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFKCMVFYSLNFNFYIILLSLYGGLMVSLICLRQLDLKMLIAYS 275
Cdd:MTH00127 211 YGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 276 SVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISYMPSMSLWWFMLSACNMSA 355
Cdd:MTH00127 291 SVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLAL 370
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1824661659 356 PPSLNLIGEISLLNGLISYSYYTMFFLFFLSFFSCVYSLYLYSFSQHGCFYSGLYSVSSCYLIEFHLIFLHWFPL 430
Cdd:MTH00127 371 PPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPL 445
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
46-375 |
5.79e-56 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 192.60 E-value: 5.79e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 46 NLGFGMGVDFFSWLMILLSFWICSLMIMSScsikfsfyFSDI------FMLIVLLLMLSLYVSFSVINLFNFYLFFEFSL 119
Cdd:COG1008 73 GISYHLGVDGISLPLVLLTALLTPLAILAS--------WNEIkkrpklYYALLLLLEAGMIGVFLALDLFLFYVFWELML 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 120 IPTLMLILGWGYqPERVSASMYLIFYTVAASLPLLSCILWMeGHIGGLCYYLFFDLFGG-------VYFYLAMILAFLIK 192
Cdd:COG1008 145 IPMYFLIGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILAL-YFLAGALTFDIAELAAAplpltaqLLLFLAFFIAFAVK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 193 LPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRvFKCMVF--YSLNFNFYIILLSLYGGLMVSLICLRQLDLKM 270
Cdd:COG1008 223 VPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLR-FALPLFpeASAYFAPLLAALGVIGIIYGALVALAQTDLKR 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 271 LIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISYMPSMSLWWFMLSA 350
Cdd:COG1008 302 LIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAAL 381
|
330 340
....*....|....*....|....*
gi 1824661659 351 CNMSAPPSLNLIGEISLLNGLISYS 375
Cdd:COG1008 382 ASLGLPGTSGFVGEFLVLLGAFQVN 406
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
103-397 |
2.03e-53 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 185.65 E-value: 2.03e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 103 FSVINLFNFYLFFEFSLIPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILWMEGHIGGLCYYLF----FDLFGG 178
Cdd:MTH00204 129 FSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILlnikLPLSIQ 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 179 VYFYLAMILAFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRvFKCMVF--YSLNFNFYIILLSLYGGL 256
Cdd:MTH00204 209 KWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLR-FSWPLFpaASEYFAPLIVMLSVIAVI 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 257 MVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMIS 336
Cdd:MTH00204 288 YGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTL 367
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1824661659 337 YMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSYYTMFFLFFLSFFSCVYSLYLY 397
Cdd:MTH00204 368 TMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
103-397 |
1.74e-52 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 183.33 E-value: 1.74e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 103 FSVINLFNFYLFFEFSLIPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILWMEGHIGGLCY----------YLF 172
Cdd:MTH00217 126 FTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYqalcclkiekELQ 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 173 FDLFGGVYFYLAmilaflIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRV-FKCMVFYSLNFNFYIILLS 251
Cdd:MTH00217 206 YFIFLGFFLSLA------IKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASEYFSPLIQTLS 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 252 LYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILN 331
Cdd:MTH00217 280 LLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYY 359
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1824661659 332 KGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSYYTMFFLFFLSFFSCVYSLYLY 397
Cdd:MTH00217 360 RGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
46-397 |
1.25e-51 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 181.17 E-value: 1.25e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 46 NLGFGMGVDFFSWLMILLSFWICSLMIMssCSIKFSFYFSDIFMLIVLLLMLSLYVSFSVINLFNFYLFFEFSLIPTLML 125
Cdd:PRK05846 73 GISYHLGVDGISLLLVVLTALLTPLAVL--ASWEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 126 ILGWGYqPERVSASMYLIFYTVAASLPLLSCIL---WMEGHIGG-----LCYYLFFDLFGGVYFYLAMILAFLIKLPMYM 197
Cdd:PRK05846 151 IGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIylvVVYYNATGtfdiaDLLNLPLPPGVQYWLFLAFFIAFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 198 FHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVfkCMVFY---SLNFNFYIILLSLYGGLMVSLICLRQLDLKMLIAY 274
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRF--SLPLFpdaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAY 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 275 SSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISYMPSMSLWWFMLSACNMS 354
Cdd:PRK05846 308 SSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLG 387
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1824661659 355 APPSLNLIGEISLLNGLISYSYYTMFFLFFLSFFSCVYSLYLY 397
Cdd:PRK05846 388 LPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
107-379 |
3.17e-51 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 174.42 E-value: 3.17e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 107 NLFNFYLFFEFSLIPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILWMEGHIGGLCYYLFFDLFGGVY------ 180
Cdd:pfam00361 3 DLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLnssgll 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 181 -FYLAMILAFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFKCMVFYSLNFNFYIILLSLYGGLMVS 259
Cdd:pfam00361 83 lLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLGS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 260 LICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLS-NISYERLGSRLFILNKGMISYM 338
Cdd:pfam00361 163 LAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKTM 242
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1824661659 339 PSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSYYTM 379
Cdd:pfam00361 243 PILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFL 283
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
46-397 |
5.16e-50 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 176.67 E-value: 5.16e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 46 NLGFGMGVDFFSWLMILLSFWICSLMIMSSC-SIKFSFYFsdiFMLIVLLLMLSLYVSFSVINLFNFYLFFEFSLIPTLM 124
Cdd:TIGR01972 68 GISYHLGVDGISLLLVLLTALLTLLAILASWeSIQKRVKE---FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 125 LILGWGyQPERVSASMYLIFYTVAASLPLLSCIL---WMEGHIGGLCYYLFFDLFGGV--YFYLAMILAFLIKLPMYMFH 199
Cdd:TIGR01972 145 LIGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILglyFLGGGTFDLLELLNLPLPFGVqtWLFLAFFIAFAVKVPLFPLH 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 200 LWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVfkCMVFY---SLNFNFYIILLSLYGGLMVSLICLRQLDLKMLIAYSS 276
Cdd:TIGR01972 224 TWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRF--NLPLFpdaSLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 277 VSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISYMPSMSLWWFMLSACNMSAP 356
Cdd:TIGR01972 302 ISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLP 381
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1824661659 357 PSLNLIGEISLLNGLISYSYYTMFFLFFLSFFSCVYSLYLY 397
Cdd:TIGR01972 382 GTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
58-364 |
9.57e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 162.78 E-value: 9.57e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 58 WLMILLSFWICSLMIMSSCSIKfsfYFSDIFMLIVLLLMLSLYVSFSVINLFNFYLFFEFSLIPTLMLILGWGYQPERVS 137
Cdd:MTH00226 106 YFIILTGFIVPCSILISWHSVK---YLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQ 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 138 ASMYLIFYTVAASLPLLSCILWMEgHIGGLCYYLFFDLFGGV-------YFYLAMILAFLIKLPMYMFHLWLPKAHVEAP 210
Cdd:MTH00226 183 AAYYFFFYTLIGSVLMLLCLFSLY-NIHGTTDYLTLASCSHVvseqtqkWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAP 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 211 ISGSMILAGVLLKLGGYGLIRV-FKCMVFYSLNFNFYIILLSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFS 289
Cdd:MTH00226 262 VAGSVLLAGILLKLGGYGLVRLsWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVT 341
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1824661659 290 MNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGE 364
Cdd:MTH00226 342 HDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGE 416
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
103-434 |
2.07e-38 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 143.51 E-value: 2.07e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 103 FSVINLFNFYLFFEFSLIPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILwmegHIGGLCYYLFFDLFGGVYFY 182
Cdd:MTH00094 79 FVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL----KNFFFFSLCYFDFFLSWEMF 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 183 LAMILAFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFKCMVFYSLNFnfyIILLSLYGGLMVSLIC 262
Cdd:MTH00094 155 FILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFVYNNF---WIIFSLLGMILSSFCC 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 263 LRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISYMPSMS 342
Cdd:MTH00094 232 VFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 343 LWWFMLSACNMSAPPSLNLIGEISLLNGLISYSYYTMFFLFFLSFFSCVYSLYLYSFSQHGCFYSGLYSVSSCYLIEFHL 422
Cdd:MTH00094 312 LIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLPLVF 391
|
330
....*....|..
gi 1824661659 423 IFLHWFPLNIMF 434
Cdd:MTH00094 392 MMFNMFWLSLFY 403
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
47-378 |
5.06e-33 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 130.15 E-value: 5.06e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 47 LGFGMGVDFFSWLMILLSFWICSLMIMSSCSIKFS---FYFsdiFMLIVLLLMLSLYVSfsvINLFNFYLFFEFSLIPTL 123
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKVTRKprlFYF---LMLVLYSAQIGVFLA---QDLLLFFLMWELELVPVY 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 124 MLILGWGYQpERVSASMYLIFYTVAASLPLLSCILWMEGHIGGLCYYLF------FDLFGGVYFYLAMILAFLIKLPMYM 197
Cdd:PRK12561 125 LLISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAelgaksYPLALELLLYAGFLIAFGVKLPIFP 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 198 FHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRvFKCMVFYSLNFNFYIILLSL------YGGLMvsliCLRQLDLKML 271
Cdd:PRK12561 204 LHTWLPDAHGEASAPVSMILAGVLLKMGGYALIR-FNVQMLPDAHVYFAPALAILgvvniiYGALN----AFAQDNVKRR 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 272 IAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSrLFILNKGMISYMPSMSLWWFMLSAC 351
Cdd:PRK12561 279 LAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHT-LSIPNMGGLAKVMPKTFALFTASSM 357
|
330 340
....*....|....*....|....*...
gi 1824661659 352 NMSAPPSLN-LIGEISLLNGLISYSYYT 378
Cdd:PRK12561 358 ASLALPGMSgFVSELTVFLGITSSDVYS 385
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
102-354 |
2.06e-28 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 116.97 E-value: 2.06e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 102 SFSVINLFNFYLFFEFSLIPTLMLILGWGYQpERVSASMYLIFYTVAASLPLLSCILWMEGHIGGLCYYLFFDLFGGVY- 180
Cdd:CHL00011 128 LFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTLNFETLANQSYp 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 181 ------FYLAMILAFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFKCMVFYSLN-FNFYIILLSLY 253
Cdd:CHL00011 207 valeilFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSiFSPWLVIVGAI 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 254 GGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLgsRLFILNK- 332
Cdd:CHL00011 287 QIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEm 364
|
250 260
....*....|....*....|...
gi 1824661659 333 -GMISYMPSMslwWFMLSACNMS 354
Cdd:CHL00011 365 gGIAIPMPKI---FTMFSSFSMA 384
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
47-379 |
2.39e-28 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 117.11 E-value: 2.39e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 47 LGFGMGVDFFSWLMILLSFWICSLMIMSSCSIKFS---FYFSDIFMLIVLLLMlslyvsFSVINLFNFYLFFEFSLIPTL 123
Cdd:PRK02546 79 LTWSVGADGLSMPLILLTGFITTLAVLAAWPVTFKpklFYFLMLAMYGGQIAV------FAVQDMLLFFLAWELELIPVY 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 124 MLILGWGYQpERVSASMYLIFYTVAASLPLLSCILWMeGHIGGLCYYLFFDLFGGVY-------FYLAMILAFLIKLPMY 196
Cdd:PRK02546 153 LLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAM-AFYGDTPTFDMTALAAKDFglgfqllCYAGLLIAYGVKLPIV 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 197 MFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRvFKCMVFYSLNFNF--YIILLSLYGGLMVSLICLRQLDLKMLIAY 274
Cdd:PRK02546 231 PLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLR-MNAGMLPDAHAQFapLLIVLGVVNIIYAALTSFAQRNLKRKIAY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 275 SSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISYMPSMSLWWFMLSACNMS 354
Cdd:PRK02546 310 SSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLA 389
|
330 340
....*....|....*....|....*
gi 1824661659 355 APPSLNLIGEISLLNGLISYSYYTM 379
Cdd:PRK02546 390 LPGMSGFVAELMVFVGFATSDAYTL 414
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
107-377 |
7.99e-28 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 114.47 E-value: 7.99e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 107 NLFNFYLFFEFSLIPTLMLILGWGYQPERVSASMYLIFYTVAASLpLLSCILWMEGHIGGLCYYLFFDLFGGVYFYLA-- 184
Cdd:COG0651 128 DLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSAL-FLLGVGLLYGATGTLNMADLAARLAELDPGLLla 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 185 ----MILAFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFKcMVFYSLNFNFYIILLSLYGGL-MV- 258
Cdd:COG0651 207 afalLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLT-LLFGADPALFLGTLLLVLGLLtMLv 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 259 -SLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISY 337
Cdd:COG0651 286 gALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKR 365
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1824661659 338 MPSMSlWWFMLSACNMSA-PPSLNLIGEISLLNGLISYSYY 377
Cdd:COG0651 366 MPLTA-AAFLIGALALAGlPPLSGFVSKWLLLQAALEAGAW 405
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
47-326 |
4.08e-23 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 101.70 E-value: 4.08e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 47 LGFGMGVDFFSW-LMILLSFWICSLMIMSSCSIKFS-FYFSDIFMLIVLLLMlslyvSFSVINLFNFYLFFEFSLIPTLM 124
Cdd:PRK06473 71 LSYHLGVDGLSLpLLVLNSLLTLIAIYSSDESIQRPrFYYSLLLLLNAGVSG-----AFLAQDLLLFFLFYELELIPLYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 125 LILGWGYQpERVSASMYLIFYTVAASLPLLSCILWMEGHIGGLCYYL------FFDLFGGVYFYLAMILAFLIKLPMYMF 198
Cdd:PRK06473 146 LIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYeplrshTLPLSTQLLLLAPILVGFGIKIPLVPF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 199 HLWLPKAHVEAPISGSMILAGVLLKLGGYGLIR-----VFKCMVFYSLNFNFYIILLSLYGGLMVslicLRQLDLKMLIA 273
Cdd:PRK06473 225 HTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRfgvglFPEAWVYLAPWLATWAVVSVLYGASCA----IAQKDMKKMVA 300
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1824661659 274 YSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSR 326
Cdd:PRK06473 301 YSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSR 353
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
107-373 |
9.63e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 94.18 E-value: 9.63e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 107 NLFNFYLFFEFSLIPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILwmeghIGGLCYYLFFDLFGG-------- 178
Cdd:PRK08375 127 DLFNLFVFLEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGL-----LYGVTGTLNMADLAGalaenptv 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 179 -VYFYLaMILAFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIR----VFKCMVFYSLNFNFYIILLSLY 253
Cdd:PRK08375 202 vTAFGF-VLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRiyftVFGGDFRFALGLGWLLAVLALL 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 254 GGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKG 333
Cdd:PRK08375 281 SMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSG 360
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1824661659 334 MISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLIS 373
Cdd:PRK08375 361 LGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVE 400
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
47-334 |
8.26e-19 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 88.62 E-value: 8.26e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 47 LGFGMGVDFFSWLMILLSfwiCSLMIMSSCSIKFSFYFSDIFMLIVLLLMLSLYVSFSVINLFNFYLFFEFSLIPTLMLI 126
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 127 LGWGYQpERVSASMYLIFYTVAASLPLLSCILWMeGHIGGLCYYLF-------FDLFGGVYFYLAMILAFLIKLPMYMFH 199
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGI-VWLSGSTSFDYdaistqnLSLNTQLILLTGLLLGFGIKIPLVPLH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 200 LWLPKAHVEAPISGSMILAGVLLKLGGYGLIRvFKCMVFYSlNFNFYIILLSLYGGLMV---SLICLRQLDLKMLIAYSS 276
Cdd:PRK07363 226 TWLPDAYTEASPAVAILLGGVLAKLGTYGLLR-FGLQLFPQ-TWSLVAPGLAIIGTISViygALSAIAQKDIKRMVAYSS 303
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1824661659 277 VSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSR-LFILNKGM 334
Cdd:PRK07363 304 IGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRdLDVLNGLM 362
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
63-428 |
7.04e-18 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 85.36 E-value: 7.04e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 63 LSFWICSLMIMSSCSIKFSFYF--SDIFMLIVLLLMLSLYVSFSVINLFNFYLFFEFSLIPTLMLILGWGYQPERVSASM 140
Cdd:MTH00062 46 LSFYLILLVLFLGLYSQVMFYNllSGVSRFFLFLSLIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASW 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 141 YLIFYTVAASLPLLSCILWMeGHIGGLCYYLFFDLFGGVYF--YLAMILAFLIKLPMYMFHLWLPKAHVEAPISGSMILA 218
Cdd:MTH00062 126 YFLGYLLLTSLPLLLCLLYL-SLVNGSFNFSDWGSDDSVSLivYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLS 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 219 GVLLKLGGYGLIRVfkCMVFYSLNFNFYIILLSLYgGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGS 298
Cdd:MTH00062 205 GYIMKLGLLGVYRF--CGFIFSGSFLGYLFLCCLF-SVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLS 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 299 IIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLL-NGLISYSYY 377
Cdd:MTH00062 282 FFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVsSSFGVLVYL 361
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1824661659 378 TMFFLFFLSFFSCVYSLYLYSFSQHGCFYSGLYSVSSCYLIEFHLIFLHWF 428
Cdd:MTH00062 362 LFWCFYLFFGGLVPLILLGHLLIRSESYESINVSNYSYLFFLIFLVFWCYL 412
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-378 |
1.96e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 75.01 E-value: 1.96e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 108 LFNFYLFFEFSLIPTLMLILGWGYQPERVSASM-YLIFYTVAASLPLLSCILWMEGH-----------IGGLCYYLFFDL 175
Cdd:PRK12667 135 AFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIkYALIGAVGTTLYFLALAFLYATFgtlnmadlsakIRGLSFPLTGGL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 176 FGGVYFYLAMILA-----FLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFKcMVFYSLN-------- 242
Cdd:PRK12667 215 AGNPPLALGVALAlalwaFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLY-TIFGISPslidfraa 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 243 FNFYIILLSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYER 322
Cdd:PRK12667 294 LSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHA 373
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1824661659 323 LGSRLFILNKGMISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSYYT 378
Cdd:PRK12667 374 AGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYL 429
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
199-378 |
2.56e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 68.42 E-value: 2.56e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 199 HLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRvFKCMVFYSLNFNFYIILLSLYGGLMV---SLICLRQLDLKMLIAYS 275
Cdd:PRK06458 234 HAWLPDAHSEAPSPVSALLSGVLLNVALYAVLR-YYILIDAAIGSDFPGRLLLIFGLLSVlvaAFFLLRQRDIKRLFAYS 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 276 SVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISYMPSMSlWWFMLSACNMS- 354
Cdd:PRK06458 313 SIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTG-WGLMLGALAIAg 391
|
170 180
....*....|....*....|....
gi 1824661659 355 APPSLNLIGEISLLNGLISYSYYT 378
Cdd:PRK06458 392 MPPFGVFISEFLILTAGLARGPLL 415
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
107-372 |
4.92e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 64.75 E-value: 4.92e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 107 NLFNFYLFFEFSLIPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILWMEGHIGGLCYYLFFDLFGGVYF-YLAM 185
Cdd:PRK08667 132 NTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLvFLLL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 186 ILAFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFKCMVFYSLNFNFYIILLSLYGGLMVSLICLRQ 265
Cdd:PRK08667 212 FLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKE 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 266 LDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMML-----------GHGLCSSGLFCLSNISYERLGSRLFILNKGM 334
Cdd:PRK08667 292 HDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLALlalggalfhslNHALFKSLLFLTAGSVVHATGTRNIEKMGGL 371
|
250 260 270
....*....|....*....|....*....|....*...
gi 1824661659 335 ISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLI 372
Cdd:PRK08667 372 VKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
181-313 |
4.34e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 61.55 E-value: 4.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 181 FYLAMILAFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFKCM----VFYSLN-------FNFYIIL 249
Cdd:PRK08668 198 VFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLpgtkLFSEFGtyrgvplFNYILAW 277
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1824661659 250 LSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLF 313
Cdd:PRK08668 278 LGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
182-328 |
4.37e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 61.31 E-value: 4.37e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 182 YLAMILAFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFKCMVFYSLNFNFYIILLSLyGGLMVSLI 261
Cdd:PRK08676 209 FLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGL-GIFSIAVA 287
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 262 C---LRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLF 328
Cdd:PRK08676 288 AfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRF 357
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
107-373 |
1.28e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 57.05 E-value: 1.28e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 107 NLFNFYLFFEFSLIPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLScILWMEGHIGGL----CYYLFFDLFGGVYFY 182
Cdd:PRK12662 131 DVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIG-IGFLYAITGTLnmgdMFLIIQDLPTNRAIQ 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 183 LAMILAFL---IKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVF-----KCMVFYSLNFNFYIILLSLYG 254
Cdd:PRK12662 210 IGVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkANFVFTTLPFNNVFMILAALA 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 255 GLMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGM 334
Cdd:PRK12662 290 IVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNL 369
|
250 260 270
....*....|....*....|....*....|....*....
gi 1824661659 335 ISYMPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLIS 373
Cdd:PRK12662 370 WKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIK 408
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
101-322 |
2.75e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 55.73 E-value: 2.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 101 VSFSVINLFNFYLFFEFSLIPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCIL--WMEGHIGglcyylFFDLFGG 178
Cdd:PRK07234 109 AAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLvyQANGTFA------FSGLATA 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 179 VYFYLAMI-LAFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVfkcmvfySLNFNFYIILLSLYGG-- 255
Cdd:PRK07234 183 DPEAFALIaLGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRC-------ALDVPGLDLIVRIFGVgt 255
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1824661659 256 -LMVSLICLRQLDLKMLIAYSSVSHMSLVISGlfsMNVWGYYGsiimmLGHGLCSSGLFCLSNISYER 322
Cdd:PRK07234 256 aLLGVLFALLEKDLKRMLAFSTISQLGFILAA---PLVGGLYA-----LAHGLVKSTLFLCAGALPSR 315
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-368 |
1.70e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 53.43 E-value: 1.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 108 LFNFYLFFEFSLIPTLMLiLGWGYQPERVSASMYLIFYTVAASLPLLSCILWMEGHIGGL----CYYLFFDLFGGVYFYL 183
Cdd:PRK12665 133 LFNLYVGFEILLVASYVL-LTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLnmadLAVRLDELPSGTRTAL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 184 AMIL--AFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVfKCMVFYSLNFNFYIILLSLYGGLMVSLI 261
Cdd:PRK12665 212 FAVLlvAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRT-HTLLFPGGGLDTLLMVVALLTMVVGILG 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 262 CLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGS----RLfilnKGMISY 337
Cdd:PRK12665 291 AIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSsslrRL----GGLAKA 366
|
250 260 270
....*....|....*....|....*....|..
gi 1824661659 338 MPSMSLWWFmLSACNMSA-PPSLNLIGEISLL 368
Cdd:PRK12665 367 SPLLAVLFF-VPALNLGGiPPFSGFIGKVALL 397
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
107-360 |
1.82e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 53.18 E-value: 1.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 107 NLFNFYLFFEFSLIPTLMLILGWGYQPERVSASM-YLIFYTVAASLPLLSCILWMEGH----IGGLCYYLFFDLFGGVYF 181
Cdd:PRK08376 142 DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIkYMFVGSLASSMVLLGIALLYGQYgtlnMAYLAVKMSENPTVVAKI 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 182 YLAMILA-FLIKLPMYMFHLWLPKAHVEAPISGSMILagVLLKLGG-YGLIRVfkCMVFYSLNFN------FYIIL--LS 251
Cdd:PRK08376 222 ALALFIAgLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARV--LFSIYGPAINlatvgwVIIILgcLT 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 252 LYGGLMVSLIclrQLDLKMLIAYSSVSHMSLVISGL------FSMNVWGYYGSIIM------MLGHGLCSSGLFCLSNIS 319
Cdd:PRK08376 298 MFVGVAMAVV---QKDVKRLLAYHSVSQIGYMLLGLgvglaaLGDPAMASYGEIALaggiyhIVNHALYKALLFLTAGAV 374
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1824661659 320 YERLGSRLFILNKGMISYMPsMSLWWFMLSACNMSAPPSLN 360
Cdd:PRK08376 375 IYETGTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFN 414
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
185-394 |
5.01e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 51.87 E-value: 5.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 185 MILAFLIKLPMYMFHlWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFkCMVFYSLNFNFYIILLSLYGGLMV--SLIC 262
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVF-TLLFPQERELLHPLLATMAAITMVigALGA 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 263 LRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISYMPSMS 342
Cdd:PRK12663 291 LAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFG 370
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1824661659 343 LWWFMLSACNMSAPPSLNLIGEISLLNGLISYSYYTMFFLFFLSFFSCVYSL 394
Cdd:PRK12663 371 ALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
107-287 |
5.65e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 51.81 E-value: 5.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 107 NLFNFYLFFEFSLIPTLMLILGWGYQPERVSASMYLIFYTVAASLPLLSCILWMEGHIGGLCYYLFFDL-FGGVYFYLAM 185
Cdd:PRK06521 134 DAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAhLSPFWASLVF 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 186 ILAFL---IKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVfkcmvfyslNFNFY--------IILLSLYG 254
Cdd:PRK06521 214 LLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV---------VFDLLgapgwwwgVLVLALGA 284
|
170 180 190
....*....|....*....|....*....|....*
gi 1824661659 255 GLMV--SLICLRQLDLKMLIAYSSVSHMSLVISGL 287
Cdd:PRK06521 285 ISAVlgVLYALAEHDLKRLLAYSTIENIGIIFVGL 319
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-399 |
2.20e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 49.95 E-value: 2.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 54 DFFSWLMILLSFWICSLMIM-SSCSI-----KFSFYFSDIFMLIVLLLmlslyvSFSVINLFNFYLFFEFSLIPTLMLIL 127
Cdd:PRK07691 76 DMFAALLVLTSSIITFLVILySFQTIgiereRYYYYPSVLFMLAGVNG------AFLTGDIFNLFVFFEVMLMASYVLIV 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 128 GWGYQPERVSASMYLIFYTVAASLPLLScILWMEGHIGGLCyylFFDLF----------GGVYFYLAMILAFLIKLPMYM 197
Cdd:PRK07691 150 IGGTKIQLRESIKYVLINVVSSAFFVVA-VAILYSVVGTLN---MADISvkiaelsagqTGLITVVAILFLFVFATKAGL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 198 FHL--WLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFKCMVFYSLNFNFYIIL-LSLYGGLMVSLICLRQLDLKMLIAY 274
Cdd:PRK07691 226 FPLyfWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILiLALLTIIFGVIGAVAYFDIKKIIIY 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 275 SSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISYMPSMSlWWFMLSACNMS 354
Cdd:PRK07691 306 NIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLG-WMFFIAALSLA 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1824661659 355 A-PPSLNLIGEISLLNGLISYSYYTMFFLFFLSFFSCVYSL---YLYSF 399
Cdd:PRK07691 385 GiPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVikiFLKGF 433
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
107-377 |
1.09e-05 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 47.45 E-value: 1.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 107 NLFNFYLFFEFSLIPTLMLIlGWGYQPERVSASM-YLIFYTVAASLPLLSCILwMEGHIGGLCYYLFFDLFGGVYFYLA- 184
Cdd:PRK08377 129 DIFNLFVFMEITAITAYALT-AYNKTGEAAEASMkYIVLGGIGSSFFLIGVAL-IYGATGTLNMAHIAQLAGTIDPTVAq 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 185 -----MILAFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFKCMVFYS--LNFNFYIILLSLYGGLM 257
Cdd:PRK08377 207 vglalLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFF 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 258 VSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMISY 337
Cdd:PRK08377 287 AELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKR 366
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1824661659 338 MPSMSLWWFMLSACNMSAPPSLNLIGEISLLNGLISYSYY 377
Cdd:PRK08377 367 MPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYT 406
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
183-368 |
1.29e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 47.73 E-value: 1.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 183 LAMILAFLI------KLPMYMFHLWLPKAHVEA-PISGSMILAGVLlKLGGYGLIRvFKCMVFYSLNFNFYIILLSLYGG 255
Cdd:PRK12650 206 LTTVVAVLIavaaftKSAQFPFHFWLPEAMAAItPVSAFLHAAAVV-KAGIYLLLR-FSPVFHDVAVWNWLLIIVGMITA 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 256 LMVSLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLFCLSNISYERLGSRLFILNKGMI 335
Cdd:PRK12650 284 LMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLW 363
|
170 180 190
....*....|....*....|....*....|....
gi 1824661659 336 SYMPsMSLWWFMLSACNMSA-PPSLNLIGEISLL 368
Cdd:PRK12650 364 RRMP-FTFVSVTIAALSMAAvPPLFGFVSKEGML 396
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
178-313 |
2.51e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 46.35 E-value: 2.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 178 GVYFYLAMILA-FLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLlKLGGYG-LIRVFKcMVFYSLNFNFYIILLSLYGG 255
Cdd:PRK05777 202 LLLFGLVFLLVgLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAvLLRLLV-VAFGGLSEDWQQVLAIIAIA 279
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 256 LMV--SLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLF 313
Cdd:PRK05777 280 SMLvgNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
108-233 |
2.64e-05 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 46.43 E-value: 2.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 108 LFNFYLFFEFSLIPTLMLILGWGyQPERVSASM-YLIFYTVAASLpLLSCILWMEGHIGGLCYYLFFDLfGGVYFYLAMI 186
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARG-TKAAVRAGFrYLLVHVLGGVL-LLAGILLHYAETGSFAFGAIAGL-GGTAAWLILI 191
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1824661659 187 lAFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVF 233
Cdd:PRK12668 192 -GFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAF 237
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
182-360 |
7.91e-05 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 45.13 E-value: 7.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 182 YLAMILAFLI----KLPMYMFHLWLPKAhVEAPISGSMILAGVLLKLGGYGLIRVFKCMVFYSLNFNFYIILLSLYGGLM 257
Cdd:PRK12646 209 FIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLF 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 258 VSLICLRQLDLKMLIAYSSVSHMSLVIS-----GLFSMNVWGYYGSIIMM---------LGHGLCSSGLFCLSNISYERL 323
Cdd:PRK12646 288 GSITALKQWDLKGILAYSTISQLGMIMAmvgigGGYAQHQQDAIASIYVFvlfaalfhlMNHAIFKCALFMGVGIIDHEA 367
|
170 180 190
....*....|....*....|....*....|....*..
gi 1824661659 324 GSRLFILNKGMISYMPSMSLwWFMLSACNMSAPPSLN 360
Cdd:PRK12646 368 GTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLN 403
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
107-278 |
3.00e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 43.37 E-value: 3.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 107 NLFNFYLFFEFSLIPTLMLIlgwGYQPERVSA---SMYLIFYTVAASLPLLSCILWMeGHIGGLC----YYLFFDLFGGV 179
Cdd:PRK12647 116 NLITLFVFWELTSITSFLLI---GFNHEREAArraALQALLVTGGGGLALLAGLILL-GNVTGTYslseLLASGDVIREH 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 180 YFYLAMILAFLI----KLPMYMFHLWLPKAhVEAPI-------SGSMILAGVLL------KLGGYGLirvfkcmvfysln 242
Cdd:PRK12647 192 PLYLAILLLVLGgaftKSAQFPFHFWLPNA-MEAPTpvsaylhSATMVKAGIYLlarlnpVLGGTPL------------- 257
|
170 180 190
....*....|....*....|....*....|....*....
gi 1824661659 243 fnfYIILLSLYGGL-MV--SLICLRQLDLKMLIAYSSVS 278
Cdd:PRK12647 258 ---WQTILPLFGGLtMLtgALLAVRQTDLKLILAYSTVS 293
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
185-313 |
4.24e-04 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 42.63 E-value: 4.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 185 MILAFLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLLKLGGYGLIRVFKcMVFYSLNFNFYIILLSLYGGLMV--SLIC 262
Cdd:TIGR01770 209 ILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFL-YILFGFSEAWQIFLAIIAFLSMLigNFGA 287
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1824661659 263 LRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLF 313
Cdd:TIGR01770 288 LAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAF 338
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
178-313 |
8.58e-04 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 41.64 E-value: 8.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 178 GVYFYLAMILA-FLIKLPMYMFHLWLPKAHVEAPISGSMILAGVLlKLGGYG-LIRVFkCMVFYSLNFNFYIILLSLYGG 255
Cdd:COG1007 201 LLLLGLVLVLAgLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAaLLRLL-VEAFPGLAADWQLLLAVLAVL 278
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 256 LMV--SLICLRQLDLKMLIAYSSVSHMSLVISGLFSMNVWGYYGSIIMMLGHGLCSSGLF 313
Cdd:COG1007 279 SMTvgNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAF 338
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
107-313 |
3.15e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 39.91 E-value: 3.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 107 NLFNFYLFFEFSLIPTLMLIlgwGYQPERVS---ASMYLIFYTVAASLPLLSCILwMEGHIGGLcyYLFFDLF----GGV 179
Cdd:PRK12644 127 NLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGII-ILGQAAGT--YRLSELLadppTGP 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 180 YFYLAMILAF---LIKLPMYMFHLWLPKAhVEAPI-------SGSMILAGVLL--KLG-GYGLIRVFKCMVfyslnfnfy 246
Cdd:PRK12644 201 AVSVAVVLILvgaLSKSAIVPFHFWLPGA-MAAPTpvsaylhAAAMVKAGIYLvaRLApGFADVPVWRPTV--------- 270
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1824661659 247 iILLSLYGGLMVSLICLRQLDLKMLIAYSSVSHMSLVIS----GLFSMNVWGyygsIIMMLGHGLCSSGLF 313
Cdd:PRK12644 271 -LVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVlvgiGTRDAALAG----LAMLLAHALFKAALF 336
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-81 |
3.24e-03 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 37.12 E-value: 3.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 1 MLMFIFSLLFMIPLSLLN------SWWAVQFWFFFLSFMFIFFGDFSFFVTNLGFGMGVDFFSWLMILLSFWICSLMIMS 74
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSkpkwlwTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
....*..
gi 1824661659 75 SCSIKFS 81
Cdd:pfam01059 81 SQKHLKS 87
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
107-346 |
5.00e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 39.19 E-value: 5.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 107 NLFNFYLFFEFSLIPTLMLILGWGYQPERVSASMYLIFyTVAASLPLLSCILWMEGHIGGLCYYLFFDLFGG--VYFYLA 184
Cdd:PRK06525 134 TLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLI-THIGSLGLYLAAATLFLQTGTFALSALSGLHGSlkYLVFLG 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 185 MILAFLIKLPMYMFHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGLIRVFKCMVFYSLNFNFYIILLSLYGGLMVSLICL 263
Cdd:PRK06525 213 ILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824661659 264 RQLDLKMLIAYSSVSHMSLVISGLfSMNVWG----YYGSIIMMLGHGLcSSGLFCLS--NISYErLGSRLFILNKGMISY 337
Cdd:PRK06525 292 PQQDMKRLLAYSTITQLGYMFFGL-SLAILGsrlaLEGSIAYIFNHAF-AKSLFFLVagALSYS-CGTRLLPRLRGVLKK 368
|
....*....
gi 1824661659 338 MPSMSLWWF 346
Cdd:PRK06525 369 LPLVGVGFC 377
|
|
| |
