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Conserved domains on  [gi|1823826939|dbj|BCB80656|]
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hypothetical protein Pflav_070660 [Phytohabitans flavus]

Protein Classification

dimethylarginine dimethylaminohydrolase family protein( domain architecture ID 10004634)

dimethylarginine dimethylaminohydrolase (DdaH) family protein similar to Pseudomonas aeruginosa N(G),N(G)-dimethylarginine dimethylaminohydrolase that hydrolyzes N(G),N(G)-dimethyl-L-arginine (ADMA) and N(G)-monomethyl-L-arginine (MMA)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DdaH COG1834
N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism];
1-259 8.09e-94

N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism];


:

Pssm-ID: 441439 [Multi-domain]  Cd Length: 264  Bit Score: 276.67  E-value: 8.09e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823826939   1 MCPPEHYEVSYAINpWMDTA-----TPVDTELALKQWERLRETLSGLGHKVHVLASEPFLPDMVYAANGAFTVDGVAYGA 75
Cdd:COG1834     4 MCRPDHFGVEYAIN-WMDPLrewagPPPDAERAVAQWDALVDALEALGVEVHRLPPVPGLPDMVFTRDAGLVIGDGAILA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823826939  76 RFKYAQRTAEATAHRAFYEAGGWEFRSPT--QTNEGeGDFayLPAayGGLILAGYGFRTEPAAHAEAQDVLGRPVVSLRL 153
Cdd:COG1834    83 RMRHPERRGEEAAYREWLEELGIPVVRLPepGVFEG-GDV--LLD--GDTLLVGYGFRTNRAGIEWLARLLGYEVVPLEL 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823826939 154 VDPRFYHLDTALAALDDRSVTYFPAAFSTASQRVLRQLFPDAVLADEADAHAFGLNLVS-DGRNVVLNSEATGMARKVEA 232
Cdd:COG1834   158 VDPRFLHLDTAFCPLAPGLALVYPEAFDPESLALLKEPGWDLIEVPEEEAAWLGCNVLSlGGRRVVSPAGNPRLNAALRA 237
                         250       260
                  ....*....|....*....|....*..
gi 1823826939 233 AGYTPVLVELSELKKGGGSVKCCVAEL 259
Cdd:COG1834   238 AGFEVIEVDLSEFLKGGGGFHCLTLPL 264
 
Name Accession Description Interval E-value
DdaH COG1834
N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism];
1-259 8.09e-94

N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism];


Pssm-ID: 441439 [Multi-domain]  Cd Length: 264  Bit Score: 276.67  E-value: 8.09e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823826939   1 MCPPEHYEVSYAINpWMDTA-----TPVDTELALKQWERLRETLSGLGHKVHVLASEPFLPDMVYAANGAFTVDGVAYGA 75
Cdd:COG1834     4 MCRPDHFGVEYAIN-WMDPLrewagPPPDAERAVAQWDALVDALEALGVEVHRLPPVPGLPDMVFTRDAGLVIGDGAILA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823826939  76 RFKYAQRTAEATAHRAFYEAGGWEFRSPT--QTNEGeGDFayLPAayGGLILAGYGFRTEPAAHAEAQDVLGRPVVSLRL 153
Cdd:COG1834    83 RMRHPERRGEEAAYREWLEELGIPVVRLPepGVFEG-GDV--LLD--GDTLLVGYGFRTNRAGIEWLARLLGYEVVPLEL 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823826939 154 VDPRFYHLDTALAALDDRSVTYFPAAFSTASQRVLRQLFPDAVLADEADAHAFGLNLVS-DGRNVVLNSEATGMARKVEA 232
Cdd:COG1834   158 VDPRFLHLDTAFCPLAPGLALVYPEAFDPESLALLKEPGWDLIEVPEEEAAWLGCNVLSlGGRRVVSPAGNPRLNAALRA 237
                         250       260
                  ....*....|....*....|....*..
gi 1823826939 233 AGYTPVLVELSELKKGGGSVKCCVAEL 259
Cdd:COG1834   238 AGFEVIEVDLSEFLKGGGGFHCLTLPL 264
DDAH_eukar pfam19420
N,N dimethylarginine dimethylhydrolase, eukaryotic; This family contains N(G),N(G) ...
26-260 5.79e-07

N,N dimethylarginine dimethylhydrolase, eukaryotic; This family contains N(G),N(G)-dimethylarginine dimethylaminohydrolases (DDAH) from eukaryotes. It also includes arginine deiminases and DDAH from prokaryotes. These enzymes are involved in arginine metabolism and belong to the amidinotransferase (AT) superfamily as they share the alpha/beta propeller fold, which includes structurally important residues (buried hydrophobic residues, buried hydrophilic residues hydrogen-bonded with mainchain groups and the hallmark of three consecutive buried Gly residues near the C-terminus, conserved among its members.


Pssm-ID: 437252 [Multi-domain]  Cd Length: 288  Bit Score: 49.68  E-value: 5.79e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823826939  26 ELALKQWERLRETLSGLGHKVHVLAS-EPFLPDMVYAAN-GAFTVDGVAYGARFKYAQRTAEATA-------HRAFYEAG 96
Cdd:pfam19420  26 ERALKEFDAMVQALRQNGIEVIVLDDtEPKTPDAVFPNNwFSTHADGTVFLYPMYAENRRLERREdllelllEKGFAVYK 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823826939  97 GWEFRSPTQTN---EGEGDFAYL---PAAYGGLilagyGFRTEPAAHAEAQDVLGRPVV---SLRLVDPR---FYHLDTA 164
Cdd:pfam19420 106 VLDYSGFEDESkflEGTGDMVFDhenKIAYGAL-----SPRADEEVLEEVCREIGYKPVtfhSEVIVDRKgkpIYHTNVM 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823826939 165 LAALDDRSVTYFPAAFS----TASQRVLRQLFPDAVLADEADAHAFGLNL--VSDGRNVVLNSEATGMA-----RKVEAA 233
Cdd:pfam19420 181 MNVGEDLAVVCLESIPDrkerELVLRALTQSGKEIIDISEEQIFHFAGNVleLCNGNKNLIMSVTAYDSltpvqEQLIEK 260
                         250       260
                  ....*....|....*....|....*...
gi 1823826939 234 GYTPVLVELSEL-KKGGGSVKCCVAELR 260
Cdd:pfam19420 261 YCEVISVDIPTIeRLGGGSARCMIAEIF 288
 
Name Accession Description Interval E-value
DdaH COG1834
N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism];
1-259 8.09e-94

N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism];


Pssm-ID: 441439 [Multi-domain]  Cd Length: 264  Bit Score: 276.67  E-value: 8.09e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823826939   1 MCPPEHYEVSYAINpWMDTA-----TPVDTELALKQWERLRETLSGLGHKVHVLASEPFLPDMVYAANGAFTVDGVAYGA 75
Cdd:COG1834     4 MCRPDHFGVEYAIN-WMDPLrewagPPPDAERAVAQWDALVDALEALGVEVHRLPPVPGLPDMVFTRDAGLVIGDGAILA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823826939  76 RFKYAQRTAEATAHRAFYEAGGWEFRSPT--QTNEGeGDFayLPAayGGLILAGYGFRTEPAAHAEAQDVLGRPVVSLRL 153
Cdd:COG1834    83 RMRHPERRGEEAAYREWLEELGIPVVRLPepGVFEG-GDV--LLD--GDTLLVGYGFRTNRAGIEWLARLLGYEVVPLEL 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823826939 154 VDPRFYHLDTALAALDDRSVTYFPAAFSTASQRVLRQLFPDAVLADEADAHAFGLNLVS-DGRNVVLNSEATGMARKVEA 232
Cdd:COG1834   158 VDPRFLHLDTAFCPLAPGLALVYPEAFDPESLALLKEPGWDLIEVPEEEAAWLGCNVLSlGGRRVVSPAGNPRLNAALRA 237
                         250       260
                  ....*....|....*....|....*..
gi 1823826939 233 AGYTPVLVELSELKKGGGSVKCCVAEL 259
Cdd:COG1834   238 AGFEVIEVDLSEFLKGGGGFHCLTLPL 264
DDAH_eukar pfam19420
N,N dimethylarginine dimethylhydrolase, eukaryotic; This family contains N(G),N(G) ...
26-260 5.79e-07

N,N dimethylarginine dimethylhydrolase, eukaryotic; This family contains N(G),N(G)-dimethylarginine dimethylaminohydrolases (DDAH) from eukaryotes. It also includes arginine deiminases and DDAH from prokaryotes. These enzymes are involved in arginine metabolism and belong to the amidinotransferase (AT) superfamily as they share the alpha/beta propeller fold, which includes structurally important residues (buried hydrophobic residues, buried hydrophilic residues hydrogen-bonded with mainchain groups and the hallmark of three consecutive buried Gly residues near the C-terminus, conserved among its members.


Pssm-ID: 437252 [Multi-domain]  Cd Length: 288  Bit Score: 49.68  E-value: 5.79e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823826939  26 ELALKQWERLRETLSGLGHKVHVLAS-EPFLPDMVYAAN-GAFTVDGVAYGARFKYAQRTAEATA-------HRAFYEAG 96
Cdd:pfam19420  26 ERALKEFDAMVQALRQNGIEVIVLDDtEPKTPDAVFPNNwFSTHADGTVFLYPMYAENRRLERREdllelllEKGFAVYK 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823826939  97 GWEFRSPTQTN---EGEGDFAYL---PAAYGGLilagyGFRTEPAAHAEAQDVLGRPVV---SLRLVDPR---FYHLDTA 164
Cdd:pfam19420 106 VLDYSGFEDESkflEGTGDMVFDhenKIAYGAL-----SPRADEEVLEEVCREIGYKPVtfhSEVIVDRKgkpIYHTNVM 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823826939 165 LAALDDRSVTYFPAAFS----TASQRVLRQLFPDAVLADEADAHAFGLNL--VSDGRNVVLNSEATGMA-----RKVEAA 233
Cdd:pfam19420 181 MNVGEDLAVVCLESIPDrkerELVLRALTQSGKEIIDISEEQIFHFAGNVleLCNGNKNLIMSVTAYDSltpvqEQLIEK 260
                         250       260
                  ....*....|....*....|....*...
gi 1823826939 234 GYTPVLVELSEL-KKGGGSVKCCVAELR 260
Cdd:pfam19420 261 YCEVISVDIPTIeRLGGGSARCMIAEIF 288
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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