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Conserved domains on  [gi|1823525841|gb|QIP53275|]
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NADH dehydrogenase subunit 4 (mitochondrion) [Sphaerias blanfordi]

Protein Classification

NADH dehydrogenase subunit 4( domain architecture ID 11475903)

NADH dehydrogenase subunit 4 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND4 MTH00110
NADH dehydrogenase subunit 4; Provisional
1-459 0e+00

NADH dehydrogenase subunit 4; Provisional


:

Pssm-ID: 177172 [Multi-domain]  Cd Length: 459  Bit Score: 772.53  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841   1 MLKIIMPTTMLIPLIWLSKNKMVWINTTAHSLMITLLSLPLLNQFNDTSLNLSITYFSDSLSTPLIMLTMWLLPLTIIAS 80
Cdd:MTH00110    1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  81 QFHLAKESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00110   81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 161 LVALIYLQNIMGSLNILLTQLMSKPLTESWGNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00110  161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 241 YGMLRITTMLNPTTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHG 320
Cdd:MTH00110  241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 321 LTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGINI 400
Cdd:MTH00110  321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1823525841 401 IITALYSLYMLITTQRGKPTHHINNLTPSYTREHTLMTMHLLPLLLLSINPKIIMGTLY 459
Cdd:MTH00110  401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
 
Name Accession Description Interval E-value
ND4 MTH00110
NADH dehydrogenase subunit 4; Provisional
1-459 0e+00

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177172 [Multi-domain]  Cd Length: 459  Bit Score: 772.53  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841   1 MLKIIMPTTMLIPLIWLSKNKMVWINTTAHSLMITLLSLPLLNQFNDTSLNLSITYFSDSLSTPLIMLTMWLLPLTIIAS 80
Cdd:MTH00110    1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  81 QFHLAKESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00110   81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 161 LVALIYLQNIMGSLNILLTQLMSKPLTESWGNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00110  161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 241 YGMLRITTMLNPTTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHG 320
Cdd:MTH00110  241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 321 LTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGINI 400
Cdd:MTH00110  321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1823525841 401 IITALYSLYMLITTQRGKPTHHINNLTPSYTREHTLMTMHLLPLLLLSINPKIIMGTLY 459
Cdd:MTH00110  401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
11-437 5.07e-88

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 276.96  E-value: 5.07e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  11 LIPLIWLSKNKMVWINTTAHSLMITLLSLPLLNQFNDTSLN------------LSITYF--SDSLSTPLIMLTMWLLPLT 76
Cdd:COG1008    19 LLLLLPRRNARLARWVALAVSLLTLLLSLYLLAGFDPGTGGfqfvesypwipsLGISYHlgVDGISLPLVLLTALLTPLA 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  77 IIASqfhlAKESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQtERLNAGLYFLFYTLVG 156
Cdd:COG1008    99 ILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGE-RRIYAAIKFFLYTLAG 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 157 SLPLLVALIYLQNIMGSLNILLTQLMSKPLTESWGnSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLL 236
Cdd:COG1008   174 SLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQ-LLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLL 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 237 KLGGYGMLRITTMLNP-TTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATAL 315
Cdd:COG1008   253 KMGGYGLLRFALPLFPeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQ 332
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 316 MIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVL 395
Cdd:COG1008   333 MVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAIL 412
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|..
gi 1823525841 396 MGINIIITALYSLYMLITTQRGKPTHHINNLTPSYTREHTLM 437
Cdd:COG1008   413 AALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVL 454
NDH_I_M TIGR01972
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ...
31-459 1.98e-77

proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273903 [Multi-domain]  Cd Length: 481  Bit Score: 249.47  E-value: 1.98e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  31 SLMITLLSLPLLNQFNDTS--------------LNLSITYFSDSLSTPLIMLTMWLLPLTIIASQFHLAKesttRKKLYM 96
Cdd:TIGR01972  34 ALATLLLSLLLLFQFDPTGsgfqftedipwipaLGISYHLGVDGISLLLVLLTALLTLLAILASWESIQK----RVKEFY 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  97 TMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQTeRLNAGLYFLFYTLVGSLPLLVALIYLQnIMGSLNI 176
Cdd:TIGR01972 110 ALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLY-FLGGGTF 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 177 LLTQLMSKPLTESWgNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNP-TTN 255
Cdd:TIGR01972 188 DLLELLNLPLPFGV-QTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASL 266
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 256 FMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYE 335
Cdd:TIGR01972 267 YFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYE 346
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 336 RIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGINIIITALYSLYMLITTQ 415
Cdd:TIGR01972 347 RAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVF 426
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*
gi 1823525841 416 RGKPT-HHINNLTPSYTREHTLMTMHLLPLLLLSINPKIIMGTLY 459
Cdd:TIGR01972 427 FGELSnPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLDLTE 471
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
112-397 4.31e-66

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 213.71  E-value: 4.31e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 112 ATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNILLTQLMSKPLTESWG 191
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 192 NSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNPTTNFMAYPFLMLSLWGMIM 271
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 272 TSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANS-NYERIHSRTMILARGLQT 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1823525841 351 LLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMG 397
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAG 287
 
Name Accession Description Interval E-value
ND4 MTH00110
NADH dehydrogenase subunit 4; Provisional
1-459 0e+00

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177172 [Multi-domain]  Cd Length: 459  Bit Score: 772.53  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841   1 MLKIIMPTTMLIPLIWLSKNKMVWINTTAHSLMITLLSLPLLNQFNDTSLNLSITYFSDSLSTPLIMLTMWLLPLTIIAS 80
Cdd:MTH00110    1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  81 QFHLAKESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00110   81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 161 LVALIYLQNIMGSLNILLTQLMSKPLTESWGNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00110  161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 241 YGMLRITTMLNPTTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHG 320
Cdd:MTH00110  241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 321 LTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGINI 400
Cdd:MTH00110  321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1823525841 401 IITALYSLYMLITTQRGKPTHHINNLTPSYTREHTLMTMHLLPLLLLSINPKIIMGTLY 459
Cdd:MTH00110  401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
ND4 MTH00124
NADH dehydrogenase subunit 4; Provisional
1-457 0e+00

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214427 [Multi-domain]  Cd Length: 457  Bit Score: 607.96  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841   1 MLKIIMPTTMLIPLIWLSKNKMVWINTTAHSLMITLLSLPLLNQFNDTSLNLSITYFSDSLSTPLIMLTMWLLPLTIIAS 80
Cdd:MTH00124    1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  81 QFHLAKESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00124   81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 161 LVALIYLQNIMGSLNILLTQLMSKPLTESWGNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00124  161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 241 YGMLRITTMLNPTTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHG 320
Cdd:MTH00124  241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 321 LTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGINI 400
Cdd:MTH00124  321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1823525841 401 IITALYSLYMLITTQRGKPTHHINNLTPSYTREHTLMTMHLLPLLLLSINPKIIMGT 457
Cdd:MTH00124  401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
ND4 MTH00068
NADH dehydrogenase subunit 4; Provisional
1-458 0e+00

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214417 [Multi-domain]  Cd Length: 458  Bit Score: 578.02  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841   1 MLKIIMPTTMLIPLIWLSKNKMVWINTTAHSLMITLLSLPLLNQFNDTSLNLSITYFSDSLSTPLIMLTMWLLPLTIIAS 80
Cdd:MTH00068    1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  81 QFHLAKESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00068   81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 161 LVALIYLQNIMGSLNILLTQLMSKPLTESWGNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00068  161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 241 YGMLRITTMLNPTTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHG 320
Cdd:MTH00068  241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 321 LTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGINI 400
Cdd:MTH00068  321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1823525841 401 IITALYSLYMLITTQRGKPTHHINNLTPSYTREHTLMTMHLLPLLLLSINPKIIMGTL 458
Cdd:MTH00068  401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGMF 458
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
1-456 1.26e-171

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 489.85  E-value: 1.26e-171
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841   1 MLKIIMPTTMLIPLIWLSKNKMVWINTTAHSLMITLLSLPLLNQFNDTSLNLSITYF-SDSLSTPLIMLTMWLLPLTIIA 79
Cdd:MTH00127    1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMaTDPLSTPLLVLTCWLLPLMILA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  80 SQFHLAKESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLP 159
Cdd:MTH00127   81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 160 LLVALIYLQNIMGSLNILLTQLMSKPLTESWGNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00127  161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 240 GYGMLRITTMLNPTTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAH 319
Cdd:MTH00127  241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 320 GLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGIN 399
Cdd:MTH00127  321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1823525841 400 IIITALYSLYMLITTQRGKPTHHINNLTPSYTREHTLMTMHLLPLLLLSINPKIIMG 456
Cdd:MTH00127  401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
ND4 MTH00206
NADH dehydrogenase subunit 4; Provisional
3-454 7.12e-161

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214458 [Multi-domain]  Cd Length: 450  Bit Score: 462.10  E-value: 7.12e-161
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841   3 KIIMPTTMLIPLIWLSKNKMVWINTTAHSLMITLLSLPLLNQFNDTSLNLSITYFS-DSLSTPLIMLTMWLLPLTIIASQ 81
Cdd:MTH00206    1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSyDPLSSPLVILSCWLLPLMFLASQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  82 FHLAKESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLL 161
Cdd:MTH00206   81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 162 VALIYLQNIMGSLNILLTQLMSKpltESWGNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 241
Cdd:MTH00206  161 IALLFLQNSLGSLSLYILYFSKL---TTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 242 GMLRITTMLNPTTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGL 321
Cdd:MTH00206  238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 322 TSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGINII 401
Cdd:MTH00206  318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1823525841 402 ITALYSLYMLITTQRGKPTHHINNLTPSYTREHTLMTMHLLPLLLLSINPKII 454
Cdd:MTH00206  398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
ND4 MTH00044
NADH dehydrogenase subunit 4; Validated
1-455 2.32e-149

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214411 [Multi-domain]  Cd Length: 458  Bit Score: 433.25  E-value: 2.32e-149
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841   1 MLKIIMPTTMLIPLIWLSKNKMVWINTTAHSLMITLLSLPLL-NQFNDTSLNLSITYFSDSLSTPLIMLTMWLLPLTIIA 79
Cdd:MTH00044    1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLnNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  80 SQFHLAKESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLP 159
Cdd:MTH00044   81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 160 LLVALIYLQNIMGSLNILLTQLMSKPLTESWGNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00044  161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 240 GYGMLRITTMLN-PTTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIA 318
Cdd:MTH00044  241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 319 HGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGI 398
Cdd:MTH00044  321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1823525841 399 NIIITALYSLYMLITTQRGKPTHHINNLTPSYTREHTLMTMHLLPLLLLSINPKIIM 455
Cdd:MTH00044  401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
ND4 MTH00150
NADH dehydrogenase subunit 4; Provisional
37-440 2.30e-116

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214435 [Multi-domain]  Cd Length: 417  Bit Score: 347.60  E-value: 2.30e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  37 LSLPLLNQFNDTSLNLSITYFSDSLSTPLIMLTMWLLPLTIIASQFhlAKESTTRKKLYMTMLVMLQIFLIMTFTATELI 116
Cdd:MTH00150    1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 117 LFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNILLTQLMSKPLTESWgnsLLW 196
Cdd:MTH00150   79 MFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWG 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 197 LACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNPTTNFMAYPFLMLSLWGMIMTSSIC 276
Cdd:MTH00150  156 LLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLIC 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 277 LRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMA 356
Cdd:MTH00150  236 LRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLS 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 357 AWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGINIIITALYSLYMLITTQRGKPTHHINNLTPSYTREHTL 436
Cdd:MTH00150  316 LWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLL 395

                  ....
gi 1823525841 437 MTMH 440
Cdd:MTH00150  396 LLLH 399
ND4 MTH00163
NADH dehydrogenase subunit 4; Provisional
1-455 3.96e-115

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214443 [Multi-domain]  Cd Length: 445  Bit Score: 345.22  E-value: 3.96e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841   1 MLKIIMPTTMLIPLIWLSKNKMVWINttahSLMITLLSLPLLNQFNDTSLNLSITYFSDSLSTPLIMLTMWLLPLTIIAS 80
Cdd:MTH00163    1 MLKFLFMLLFLIPLCFLKNSWWLVQS----LLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  81 QfhLAKESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00163   77 E--SVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 161 LVALIYLQNIMGSLNILLTQLMSkpltesWGNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00163  155 LVGIFYLYNNSGSLSFFLLNFFG------SLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 241 YGMLRITTMLNPTTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHG 320
Cdd:MTH00163  229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 321 LTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGINI 400
Cdd:MTH00163  309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1823525841 401 IITALYSLYMLITTQRGKPTHHINNLTPSYTREHTLMTMHLLPLLLLSINPKIIM 455
Cdd:MTH00163  389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
ND4 MTH00205
NADH dehydrogenase subunit 4; Provisional
5-455 1.22e-108

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214457 [Multi-domain]  Cd Length: 448  Bit Score: 328.86  E-value: 1.22e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841   5 IMPTTMLIPLIWLSKNKMVWINTTAHSLMITLLSLPLLNQFNDTSLNLSITYFSDSLSTPLIMLTMWLLPLTIIASQFHL 84
Cdd:MTH00205    2 SIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVF 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  85 akESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLLVAL 164
Cdd:MTH00205   82 --KSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 165 IYLQNIMGSLNILLtqlMSKPLTESWGNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGML 244
Cdd:MTH00205  160 FFLNSLNFSLSMFF---NFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLI 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 245 RITTMLNPTTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSS 324
Cdd:MTH00205  237 RITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSS 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 325 VLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGINIIITA 404
Cdd:MTH00205  317 GMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSG 396
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1823525841 405 LYSLYMLITTQRGKPTHHINNLTPSYTREHTLMTMHLLPLLLLSINPKIIM 455
Cdd:MTH00205  397 AYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
ND4 MTH00014
NADH dehydrogenase subunit 4; Validated
1-454 1.85e-101

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214399 [Multi-domain]  Cd Length: 452  Bit Score: 310.52  E-value: 1.85e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841   1 MLKIIMPTTMLIpLIWLSKNKMVWINTTAHSLMITLLSLPLLNQFNDTSLNLSITYFSDSLSTPLIMLTMWLLPLTIIAS 80
Cdd:MTH00014    1 MLKLIMPLISLL-LLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  81 qfHLAKESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00014   80 --FKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 161 LVALIYLQNIMGSLNILLTQLMSKPLTESwgnSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00014  158 LMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 241 YGMLRITTMLNPTTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHG 320
Cdd:MTH00014  235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 321 LTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGINI 400
Cdd:MTH00014  315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1823525841 401 IITALYSLYMLITTQRGKPTHHINNLTPSYTREHTLMTMHLLPLLLLSINPKII 454
Cdd:MTH00014  395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
11-437 5.07e-88

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 276.96  E-value: 5.07e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  11 LIPLIWLSKNKMVWINTTAHSLMITLLSLPLLNQFNDTSLN------------LSITYF--SDSLSTPLIMLTMWLLPLT 76
Cdd:COG1008    19 LLLLLPRRNARLARWVALAVSLLTLLLSLYLLAGFDPGTGGfqfvesypwipsLGISYHlgVDGISLPLVLLTALLTPLA 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  77 IIASqfhlAKESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQtERLNAGLYFLFYTLVG 156
Cdd:COG1008    99 ILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGE-RRIYAAIKFFLYTLAG 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 157 SLPLLVALIYLQNIMGSLNILLTQLMSKPLTESWGnSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLL 236
Cdd:COG1008   174 SLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQ-LLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLL 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 237 KLGGYGMLRITTMLNP-TTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATAL 315
Cdd:COG1008   253 KMGGYGLLRFALPLFPeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQ 332
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 316 MIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVL 395
Cdd:COG1008   333 MVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAIL 412
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|..
gi 1823525841 396 MGINIIITALYSLYMLITTQRGKPTHHINNLTPSYTREHTLM 437
Cdd:COG1008   413 AALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVL 454
PRK05846 PRK05846
NADH:ubiquinone oxidoreductase subunit M; Reviewed
59-433 4.11e-79

NADH:ubiquinone oxidoreductase subunit M; Reviewed


Pssm-ID: 235622 [Multi-domain]  Cd Length: 497  Bit Score: 253.97  E-value: 4.11e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  59 DSLSTPLIMLTMWLLPLTIIASQfhlaKESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGG 138
Cdd:PRK05846   81 DGISLLLVVLTALLTPLAVLASW----EEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGG 156
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 139 QTeRLNAGLYFLFYTLVGSLPLLVALIYL----QNIMGSLNIllTQLMSKPLTESWGNsLLWLACMMAFMVKMPLYGLHL 214
Cdd:PRK05846  157 KN-RIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDI--ADLLNLPLPPGVQY-WLFLAFFIAFAVKMPMFPLHT 232
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 215 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNPTTNFMAYPFLM-LSLWGMIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK05846  233 WLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIItLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 294 MALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSI 373
Cdd:PRK05846  313 MGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 374 NLIGELFVVMSSFSWSSISIVLMGINIIITALYSLYMLITTQRGKPTHHINNLTPSYTRE 433
Cdd:PRK05846  393 GFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRE 452
NDH_I_M TIGR01972
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ...
31-459 1.98e-77

proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273903 [Multi-domain]  Cd Length: 481  Bit Score: 249.47  E-value: 1.98e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  31 SLMITLLSLPLLNQFNDTS--------------LNLSITYFSDSLSTPLIMLTMWLLPLTIIASQFHLAKesttRKKLYM 96
Cdd:TIGR01972  34 ALATLLLSLLLLFQFDPTGsgfqftedipwipaLGISYHLGVDGISLLLVLLTALLTLLAILASWESIQK----RVKEFY 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  97 TMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQTeRLNAGLYFLFYTLVGSLPLLVALIYLQnIMGSLNI 176
Cdd:TIGR01972 110 ALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLY-FLGGGTF 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 177 LLTQLMSKPLTESWgNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNP-TTN 255
Cdd:TIGR01972 188 DLLELLNLPLPFGV-QTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASL 266
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 256 FMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYE 335
Cdd:TIGR01972 267 YFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYE 346
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 336 RIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGINIIITALYSLYMLITTQ 415
Cdd:TIGR01972 347 RAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVF 426
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*
gi 1823525841 416 RGKPT-HHINNLTPSYTREHTLMTMHLLPLLLLSINPKIIMGTLY 459
Cdd:TIGR01972 427 FGELSnPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLDLTE 471
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
112-397 4.31e-66

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 213.71  E-value: 4.31e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 112 ATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNILLTQLMSKPLTESWG 191
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 192 NSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNPTTNFMAYPFLMLSLWGMIM 271
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 272 TSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANS-NYERIHSRTMILARGLQT 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1823525841 351 LLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMG 397
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAG 287
ND4 MTH00204
NADH dehydrogenase subunit 4; Provisional
59-410 4.65e-65

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 164750 [Multi-domain]  Cd Length: 485  Bit Score: 217.24  E-value: 4.65e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  59 DSLSTPLIMLTMWLLPLTIIASQfhlaKESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGG 138
Cdd:MTH00204   82 DGVSLFFILLTTLLIPICILISW----KSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGS 157
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 139 QTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNILLTQLMSKPL-TESWgnslLWLACMMAFMVKMPLYGLHLWLP 217
Cdd:MTH00204  158 REEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLsIQKW----LLVGFFLSLAVKIPQIPFHIWLP 233
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 218 KAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNPTTNFMAYPF-LMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMAL 296
Cdd:MTH00204  234 QAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLiVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGL 313
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 297 VIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLI 376
Cdd:MTH00204  314 VPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFV 393
                         330       340       350
                  ....*....|....*....|....*....|....
gi 1823525841 377 GELFVVMSSFSWSSISIVLMGINIIITALYSLYM 410
Cdd:MTH00204  394 GEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
ND4 MTH00217
NADH dehydrogenase subunit 4; Provisional
59-410 8.60e-64

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214462 [Multi-domain]  Cd Length: 482  Bit Score: 213.76  E-value: 8.60e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  59 DSLSTPLIMLTMWLLPLTIIAS----QFhLAKEsttrkklYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIIT 134
Cdd:MTH00217   79 DGISIFFLILTALLTPICILISwnsiKF-LIKE-------FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIG 150
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 135 RWGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNIlltQLMSKPLTESWGNSLLWLACMMAFMVKMPLYGLHL 214
Cdd:MTH00217  151 IWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDY---QALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHI 227
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 215 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNPTTNFMAYPFLM-LSLWGMIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:MTH00217  228 WLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQtLSLLAIIYGSLTTCRQVDLKRIIAYSSVAH 307
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 294 MALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSI 373
Cdd:MTH00217  308 MGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSC 387
                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 1823525841 374 NLIGELFVVMSSFSWSSISIVLMGINIIITALYSLYM 410
Cdd:MTH00217  388 NFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
ND4 MTH00226
NADH dehydrogenase subunit 4; Provisional
59-455 6.00e-58

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214466 [Multi-domain]  Cd Length: 505  Bit Score: 198.99  E-value: 6.00e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  59 DSLSTPLIMLTMWLLPLTIIASqFHLAKESTtrkKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGG 138
Cdd:MTH00226  101 DGISIYFIILTGFIVPCSILIS-WHSVKYLT---KSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGS 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 139 QTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNiLLTQLMSKPLTESWGNSLLWLACMMAFMVKMPLYGLHLWLPK 218
Cdd:MTH00226  177 REEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTD-YLTLASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPK 255
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 219 AHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNPT-TNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:MTH00226  256 AHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLV 335
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 298 IVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIG 377
Cdd:MTH00226  336 SITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIG 415
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1823525841 378 ELFVVMSSFSWSSISIVLMGINIIITALYSLYMLITTQRGKPTHHINNLTPSYTREHTLMTMHLLPLLLLSINPKIIM 455
Cdd:MTH00226  416 EYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITASMVFFAFLIGIYPIFIL 493
PRK12561 PRK12561
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
59-411 3.70e-48

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 237137 [Multi-domain]  Cd Length: 504  Bit Score: 172.52  E-value: 3.70e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  59 DSLSTPLIMLTMWLLPLTIIASQfhlakESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGG 138
Cdd:PRK12561   58 DGLSMPLVLLSGLITTLSIFASW-----KVTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 139 QtERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNILLTQLMSKPLTESWGnSLLWLACMMAFMVKMPLYGLHLWLPK 218
Cdd:PRK12561  133 Q-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALE-LLLYAGFLIAFGVKLPIFPLHTWLPD 210
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 219 AHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNPTTNFMAYPFLM-LSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:PRK12561  211 AHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAiLGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 298 IVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIG 377
Cdd:PRK12561  291 LLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1823525841 378 ELFVVM-------SSFSWSSISIVLMGINIIITALYSLYML 411
Cdd:PRK12561  371 ELTVFLgitssdvYSSTFRTITILLAAVGLILTPIYLLSML 411
ND4 MTH00094
NADH dehydrogenase subunit 4; Provisional
82-418 1.12e-44

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177157 [Multi-domain]  Cd Length: 403  Bit Score: 160.84  E-value: 1.12e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  82 FHLAKESTTRKKLYMTMLVMLQIFLIMTFTateLILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLL 161
Cdd:MTH00094   54 LVLLSEKNFNLLILSNLLILICLLFFVSSN---MLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFL 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 162 VALIYlqnimgslNILLTQLMSKPLTESWgnsLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 241
Cdd:MTH00094  131 FVYLK--------NFFFFSLCYFDFFLSW---EMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTA 199
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 242 GMLRITTMLNPTTNFMaypFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGL 321
Cdd:MTH00094  200 GFLRILGSLNFVYNNF---WIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGY 276
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 322 TSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGINII 401
Cdd:MTH00094  277 TSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFL 356
                         330
                  ....*....|....*..
gi 1823525841 402 ITALYSLYMLITTQRGK 418
Cdd:MTH00094  357 VSFYYSLFLIVSSFMGK 373
PRK06473 PRK06473
NADH-quinone oxidoreductase subunit M;
48-430 1.24e-41

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 235810 [Multi-domain]  Cd Length: 500  Bit Score: 154.47  E-value: 1.24e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  48 TSLNLSITYFSDSLSTPLIMLTMWLLPLTIIASQfhlakESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLV 127
Cdd:PRK06473   67 DSLGLSYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELI 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 128 PTLIIITRWGGQtERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNILLTQLMSKPLTESwGNSLLWLACMMAFMVKM 207
Cdd:PRK06473  142 PLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKI 219
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 208 PLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNPTTNFMAYPFL-MLSLWGMIMTSSICLRQTDLKSLI 286
Cdd:PRK06473  220 PLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMV 299
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 287 AYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGL---QTLLPLMAAWWLLAS 363
Cdd:PRK06473  300 AYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGV 379
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1823525841 364 LTNLALPPSINLIGELFVVMSSFSWSSISIVLMGINIIITALYSLYMLITTQRGKPTHHINNLTPSY 430
Cdd:PRK06473  380 MASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPRVL 446
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
52-415 3.05e-41

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 152.22  E-value: 3.05e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  52 LSITYFSDSLSTPLIMLTMWLLPLTIIASQFHLAKESttRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLI 131
Cdd:COG0651    68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYG 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 132 IITrWGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNILLTQLMSKPLTESWGnSLLWLACMMAFMVKMPLYG 211
Cdd:COG0651   146 LVA-LGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLL-LAAFALLLVGFGIKAALFP 223
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 212 LHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNPT--TNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYS 289
Cdd:COG0651   224 LHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGAdpALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYS 303
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 290 SVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLAL 369
Cdd:COG0651   304 SVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGL 383
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 1823525841 370 PPSINLIGELFVVM-SSFSWSSISIVLMGINIIITALYSLYMLITTQ 415
Cdd:COG0651   384 PPLSGFVSKWLLLQaALEAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
PRK02546 PRK02546
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
50-411 8.45e-40

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 235050 [Multi-domain]  Cd Length: 525  Bit Score: 149.86  E-value: 8.45e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  50 LNLSITYFSDSLSTPLIMLTMWLLPLTIIAsqfhlAKESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPT 129
Cdd:PRK02546   77 LGLTWSVGADGLSMPLILLTGFITTLAVLA-----AWPVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPV 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 130 LIIITRWGGQtERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNILLTQLMSKPLTESWGNsLLWLACMMAFMVKMPL 209
Cdd:PRK02546  152 YLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQL-LCYAGLLIAYGVKLPI 229
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 210 YGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNPTTNFMAYPFL-MLSLWGMIMTSSICLRQTDLKSLIAY 288
Cdd:PRK02546  230 VPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLiVLGVVNIIYAALTSFAQRNLKRKIAY 309
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 289 SSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLA 368
Cdd:PRK02546  310 SSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLA 389
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 1823525841 369 LPPSINLIGELFVVM-------SSFSWSSISIVLMGINIIITALYSLYML 411
Cdd:PRK02546  390 LPGMSGFVAELMVFVgfatsdaYTLPFRVVVVFLAAVGVILTPIYLLSML 439
ndhD CHL00011
NADH dehydrogenase subunit 4
11-411 5.00e-39

NADH dehydrogenase subunit 4


Pssm-ID: 176954 [Multi-domain]  Cd Length: 498  Bit Score: 147.40  E-value: 5.00e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  11 LIPLIWLSKNKMV-WinttaHSLMITLLSLPLLN-------QFNDTSLNLS-----ITYFS-------DSLSTPLIMLTM 70
Cdd:CHL00011   20 LIFFLPHRGNKVIrW-----YTLCICLLELLLTTyafcyhfQLDDPLIQLKedykwINFFDfhwrlgiDGLSIGPILLTG 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  71 WLLPLTIiasqfhLAKESTTR--KKLYMTMLVML--QIFLimtFTATELILFYILFEATLVPTLIIITRWGGQtERLNAG 146
Cdd:CHL00011   95 FITTLAT------LAAWPVTRnsRLFYFLMLAMYsgQIGL---FSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSA 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 147 LYFLFYTLVGSLPLLVALI----YLQNIMgSLNILLTQLMSKPLTESwgnSLLWLACMMAFMVKMPLYGLHLWLPKAHVE 222
Cdd:CHL00011  165 TKFILYTAGGSIFLLIGVLgmglYGSNEP-TLNFETLANQSYPVALE---ILFYIGFLIAYAVKLPIIPLHTWLPDTHGE 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 223 APIAGSMVLAAVLLKLGGYGMLRITTMLNPTTNFMAYPFLML-SLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAV 301
Cdd:CHL00011  241 AHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIvGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGI 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 302 LIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIhsRTMILAR--GLQTLLPLMAAWWLLASLTNLALPPSINLIGEL 379
Cdd:CHL00011  321 GSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASLALPGMSGFVAEL 398
                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 1823525841 380 FVVM-------SSFSWSSISIVLMGINIIITALYSLYML 411
Cdd:CHL00011  399 IVFFgiitsqkYLLMPKILITFVMAIGMILTPIYLLSML 437
PRK07363 PRK07363
NADH-quinone oxidoreductase subunit M;
27-418 2.30e-33

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 180945 [Multi-domain]  Cd Length: 501  Bit Score: 131.76  E-value: 2.30e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  27 TTAHSLMITLLSLPLLNQFNDTS--------------LNLSITYFSDSLSTPLIMLTMWLLPLTIIASQfhlakESTTRK 92
Cdd:PRK07363   32 TLVFAVLVLAWSLFLLTQFDLSDpgmqfqeylpwnepLGLSYSLGVDGLSLPLLVLNSLLTWIAIYSIG-----ENTERP 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  93 KLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQtERLNAGLYFLFYTLVGSLPLLVALIYLQNIMG 172
Cdd:PRK07363  107 RLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSG 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 173 SLNILLTQLMSKPLTESwGNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNP 252
Cdd:PRK07363  186 STSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFP 264
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 253 TTNFMAYPflMLSLWGMIMT---SSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCL 329
Cdd:PRK07363  265 QTWSLVAP--GLAIIGTISViygALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHL 342
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 330 ANSNYERIHSRTMILARGLQTL---LPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGINIIITALY 406
Cdd:PRK07363  343 VGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY 422
                         410
                  ....*....|..
gi 1823525841 407 SLYMLITTQRGK 418
Cdd:PRK07363  423 FVILLNRTCFGR 434
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
52-383 3.15e-24

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 104.96  E-value: 3.15e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  52 LSITYFSDSLSTPLIMLTmwlLPLTIIASQFHLAKESTTRKKLYMTMLVMLQIFLIMTFTATeLILFYILFEATLVPTLI 131
Cdd:PRK08375   69 IGIELRADSLSALFLLVT---SILAIAALLYAIGYGEHRQTRFYALFLLLLAGLLGALLTAD-LFNLFVFLEIMSLSSYA 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 132 IITRwGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNIlltQLMSKPLTESWGNSLLWLACMMAFMVKMPLYG 211
Cdd:PRK08375  145 LVAM-GGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNM---ADLAGALAENPTVVTAFGFVLLALALKAAVFP 220
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 212 LHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITtMLNPTTNFMAYP-----FLMLSLWGMIMTSSICLRQTDLKSLI 286
Cdd:PRK08375  221 LHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIY-FTVFGGDFRFALglgwlLAVLALLSMLVGSLAALGQDDVKRVL 299
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 287 AYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTN 366
Cdd:PRK08375  300 AYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSL 379
                         330
                  ....*....|....*..
gi 1823525841 367 LALPPSINLIGELFVVM 383
Cdd:PRK08375  380 IGVPPTSGFVSKWYLVV 396
Oxidored_q5_N pfam01059
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
1-109 4.46e-23

NADH-ubiquinone oxidoreductase chain 4, amino terminus;


Pssm-ID: 366442 [Multi-domain]  Cd Length: 110  Bit Score: 93.36  E-value: 4.46e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841   1 MLKIIMPTTMLIPLIWLSKNKMVWINTTAHSLMITLLSLPLLNQFNDTSLNLSITYFS-DSLSTPLIMLTMWLLPLTIIA 79
Cdd:pfam01059   1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGiDSLSYPLIILSCWLLPLMILA 80
                          90       100       110
                  ....*....|....*....|....*....|
gi 1823525841  80 SQFHLAKESTTRKKLYMTMLVMLQIFLIMT 109
Cdd:pfam01059  81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
ND4 MTH00062
NADH dehydrogenase subunit 4; Provisional
31-382 2.67e-21

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214413 [Multi-domain]  Cd Length: 417  Bit Score: 95.76  E-value: 2.67e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  31 SLMITLLSLPLLNQFNDTSLNLSITYFS----DSLSTPLIMLTMWLlpltIIASQFHLAKESTTRKKLymtMLVMLQIFL 106
Cdd:MTH00062   12 FLLLLLFCLLYSSGVGCCILVVNNVFNGlfifDSLSFYLILLVLFL----GLYSQVMFYNLLSGVSRF---FLFLSLIFS 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 107 IMTFTATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNILLTQLMSkpl 186
Cdd:MTH00062   85 ILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDD--- 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 187 teSWGNSLLWLACMMaFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNPTTNFmAYPFLMLSL 266
Cdd:MTH00062  162 --SVSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFL-GYLFLCCLF 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 267 WGMIMTSSicLRQTDLKSLIAYSSVSHMaLVIVAVLIQTPWSYMGATALM-IAHGLTSSVLFCLANSNYERIHSRTMILA 345
Cdd:MTH00062  238 SVFFLITA--CSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVFLLLWCFYEVSGSRNWVLL 314
                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 1823525841 346 RGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVV 382
Cdd:MTH00062  315 KSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLV 351
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
54-371 2.91e-21

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 96.19  E-value: 2.91e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  54 ITYFSDSLSTPLIMLTMWLLPLTIIASQFHLAKESttRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIII 133
Cdd:PRK12667   76 IVYEVDLLGALLGLLTALVMFLILIYSYWYLEHES--GPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLV 153
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 134 TRWGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNI----LLTQLMSKPLTESWGNSLLW------LACMMAF 203
Cdd:PRK12667  154 AYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMadlsAKIRGLSFPLTGGLAGNPPLalgvalALALWAF 233
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 204 MVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRI-------TTMLNPTTNFMAYPFLMLSLWGMIMTSSIC 276
Cdd:PRK12667  234 TIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMM 313
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 277 LRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMA 356
Cdd:PRK12667  314 VVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIAS 393
                         330
                  ....*....|....*
gi 1823525841 357 AWWLLASLTNLALPP 371
Cdd:PRK12667  394 FAFLIGALSLVGIPP 408
PRK06458 PRK06458
hydrogenase 4 subunit F; Validated
57-413 2.39e-18

hydrogenase 4 subunit F; Validated


Pssm-ID: 235805 [Multi-domain]  Cd Length: 490  Bit Score: 87.29  E-value: 2.39e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  57 FSDSLSTPLIMLTMWLLPLTIIASQFHLAKE------STTRKKLYMTMLvmlQIFL---IMTFTATELILFYILFEATLV 127
Cdd:PRK06458   66 FIDDLNVFFLALIGVVGFLTSLYSIGYMRHEvehgelSPVTLRLYYGMY---QLFLftmLLALTSNNLGLMWVAIEATTL 142
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 128 PTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLL-VALIYL--QNIMGS--LNILLTQLMSKPltESWGNSLLWLACMMA 202
Cdd:PRK06458  143 SSALLVGIYRTRASLEAAWKYIIICSVGVAFALFgTILVYAnaATVMGDgeMAILWTELLKHA--SLLDPTLMKLAFVFL 220
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 203 ---FMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTML--NPTTNFMAYPFLMLSLWGMIMTSSICL 277
Cdd:PRK06458  221 ligFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSVLVAAFFLL 300
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 278 RQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAA 357
Cdd:PRK06458  301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1823525841 358 WWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGINIIITALYSLYMLIT 413
Cdd:PRK06458  381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVA 436
PRK08676 PRK08676
hydrogenase membrane subunit; Validated
101-327 1.67e-14

hydrogenase membrane subunit; Validated


Pssm-ID: 181537 [Multi-domain]  Cd Length: 485  Bit Score: 75.56  E-value: 1.67e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 101 MLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQtERLNAGLYFLFYTLVGSLPLLVALIYL----QNIMGSLNI 176
Cdd:PRK08676  110 LLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSAR-ENIDAALKYIFIASTAMIFAFIGLIFLfsltRQALGTGTL 188
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 177 LLTQLMSK-PLTESWGNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNPTTN 255
Cdd:PRK08676  189 NWTELAAHaSLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGA 268
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1823525841 256 FMAYPFLMLSLwGMIMTSSIC---LRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLF 327
Cdd:PRK08676  269 AEQFSNVLIGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLF 342
PRK08668 PRK08668
NADH dehydrogenase subunit M; Validated
3-327 1.88e-14

NADH dehydrogenase subunit M; Validated


Pssm-ID: 236332 [Multi-domain]  Cd Length: 610  Bit Score: 75.42  E-value: 1.88e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841   3 KIIMPTTMLIPLIWLSKnkMVWINTTAHSLMITLLSLPLLNQFNDTSLNLsitYFSdslstpLIMLtmwllpLTIIASQF 82
Cdd:PRK08668   25 EKIGVIGNALPLLFLIK--LYFTLKVGTGEKLTLFFGGFKLTFTLTHLSW---FFA------MISL------LVIFSVAF 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  83 HLAKESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRwGGQTERLNAGLYFLFyTLVGSLPLLV 162
Cdd:PRK08668   88 FMVSEKTKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLY 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 163 ALIYLQNIMGSLNI--LLTQLMSKPlteSWGNSLLWLACMMAFMV-KMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:PRK08668  166 AIFLIYAKTGTFDFadISQGLINDT---STGFALIVFLFLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLG 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 240 GYGMLRITTMLnPTTNFMA------------YPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPW 307
Cdd:PRK08668  243 AYGFLLVLYVL-PGTKLFSefgtyrgvplfnYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSL 321
                         330       340
                  ....*....|....*....|
gi 1823525841 308 SYMGATALMIAHGLTSSVLF 327
Cdd:PRK08668  322 GFAGGLFHVFNHALFKGLFF 341
PRK08667 PRK08667
hydrogenase membrane subunit; Validated
11-383 8.47e-14

hydrogenase membrane subunit; Validated


Pssm-ID: 236331 [Multi-domain]  Cd Length: 644  Bit Score: 73.61  E-value: 8.47e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  11 LIPLIWLSKNKMVW------INTTAHSLMITLLSL----PLLNQFNDTSLNLSITYFSDSLSTPLIMLTMWLLPLTIIAS 80
Cdd:PRK08667   18 VIPLVFRHKRKRVWqsvlwlVIAIALLLFAGSLQLftgnPLDIPLWGIAPGLDITFHIDRLAAFFIILIGLVSLCVAIYS 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  81 QFHLAKESTTRKKLYMTMLVMLQIF-LIMTFTATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLP 159
Cdd:PRK08667   98 LGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVF 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 160 LLVALIYLQNIMGSLNILLTQLMSKPLteswgnSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:PRK08667  178 LMLGIIVLFIQTGSFELSPLGASAGIL------SLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVA 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 240 GYGMLR-ITTMLNPTtnfMAYPFLMLSLwGMI---MTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATAL 315
Cdd:PRK08667  252 VYGLVRfLMDVLSPE---LWWGVLILLA-GSIsalLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTL 327
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1823525841 316 M-----------IAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVM 383
Cdd:PRK08667  328 AllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYE 406
PRK12665 PRK12665
putative monovalent cation/H+ antiporter subunit D; Reviewed
108-379 4.97e-13

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237165 [Multi-domain]  Cd Length: 521  Bit Score: 70.77  E-value: 4.97e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 108 MTFTATELILFYILFEATLVPTLIIITRwGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNI--LLTQLMSKP 185
Cdd:PRK12665  126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMadLAVRLDELP 204
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 186 lteSWGNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNPtTNFMAYPFLMLS 265
Cdd:PRK12665  205 ---SGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVA 280
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 266 LWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILA 345
Cdd:PRK12665  281 LLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRL 360
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 1823525841 346 RGLQTLLPLMAAWWLLASLtNLA-LPPSINLIGEL 379
Cdd:PRK12665  361 GGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKV 394
PRK06521 PRK06521
hydrogenase 4 subunit B; Validated
145-371 2.99e-12

hydrogenase 4 subunit B; Validated


Pssm-ID: 235820 [Multi-domain]  Cd Length: 667  Bit Score: 68.76  E-value: 2.99e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 145 AGLYFLFYTLVGSLPLLVALIYLQNIMGSLNilLTQLMSKPLTESWGNSLLWLAcMMAFMVKMPLYGLHLWLPKAHVEAP 224
Cdd:PRK06521  165 AGFLYLLMAHAGALAILLAFGLLARESGSYD--FAAMRAAHLSPFWASLVFLLA-LFGFGAKAGLVPLHVWLPRAHPAAP 241
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 225 IAGSMVLAAVLLKLGGYGMLRIT-TMLNPTTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAV-- 301
Cdd:PRK06521  242 SHVSALMSGVMLKVAIYGILRVVfDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLgl 321
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1823525841 302 -LI-----QTPWSYMGATALM---IAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPP 371
Cdd:PRK06521  322 aMVfiaygMPLLAALALTAALyhlLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPP 400
PRK12647 PRK12647
putative monovalent cation/H+ antiporter subunit A; Reviewed
94-377 4.03e-12

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237156 [Multi-domain]  Cd Length: 761  Bit Score: 68.41  E-value: 4.03e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  94 LYMTMLVMLQIFLimtftATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGS 173
Cdd:PRK12647  101 ILLFMASMLGLVL-----SDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGT 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 174 LNILLTQLMSKPLTES-WGNSLLWLACMMAFmVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRittmLN 251
Cdd:PRK12647  176 YSLSELLASGDVIREHpLYLAILLLVLGGAF-TKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LN 249
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 252 PTTNFMAYPFLMLSLWG---MIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFC 328
Cdd:PRK12647  250 PVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFM 329
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1823525841 329 LANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIG 377
Cdd:PRK12647  330 VAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLA 378
PRK12646 PRK12646
DUF4040 family protein;
94-370 8.44e-12

DUF4040 family protein;


Pssm-ID: 183646 [Multi-domain]  Cd Length: 800  Bit Score: 67.47  E-value: 8.44e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  94 LYMTMLVMLQIFLimtftATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGS 173
Cdd:PRK12646  116 LTLFMFSMIGIVL-----SDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGT 190
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 174 LNI--LLTQlmskplTESWGNSLLWLACMMAFMV----KMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRI 246
Cdd:PRK12646  191 NNIteILGQ------ADHIKNHGLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRF 263
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 247 TTMLNpTTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAV-----LIQTPWSYMGATALMIA--- 318
Cdd:PRK12646  264 TPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIASIYVFVLfaa 342
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1823525841 319 ------HGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALP 370
Cdd:PRK12646  343 lfhlmnHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVP 400
PRK07691 PRK07691
putative monovalent cation/H+ antiporter subunit D; Reviewed
2-382 1.02e-11

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 181085 [Multi-domain]  Cd Length: 496  Bit Score: 66.90  E-value: 1.02e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841   2 LKIIMPTTMLIPLIWLSKNKMVW-INTTAHSLMITLLSLPLLNQFND---TSLNL-------SITYFSDSLSTPLIMLTM 70
Cdd:PRK07691    8 LPILIPVITAILLIFLGKRPIIQrYVALIGSLLTLVAAIILVANVYKhgiQTLELgnwkapfGIVFVADMFAALLVLTSS 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  71 WLLPLTIIASQFHLAKEsttRKKLYMTMLVMLQIF-LIMTFTATELILFYILFEATLVPTLIIITrWGGQTERLNAGLYF 149
Cdd:PRK07691   88 IITFLVILYSFQTIGIE---RERYYYYPSVLFMLAgVNGAFLTGDIFNLFVFFEVMLMASYVLIV-IGGTKIQLRESIKY 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 150 LFYTLVGSLPLLVALIYLQNIMGSLNI--LLTQLMSKPLTESWGNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAG 227
Cdd:PRK07691  164 VLINVVSSAFFVVAVAILYSVVGTLNMadISVKIAELSAGQTGLITVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAI 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 228 SMVLAAVLLKLGGYGMLRITTML-NPTTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTP 306
Cdd:PRK07691  244 AALFGALLTKVGVYAIARTFTLFfSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTE 323
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1823525841 307 WSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVV 382
Cdd:PRK07691  324 SGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIV 399
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
96-422 1.21e-11

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 66.71  E-value: 1.21e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  96 MTMLVMlqiflimtftATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLN 175
Cdd:COG1009   124 MLGLVL----------SDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLN 193
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 176 IllTQLMSKPlTESWGNSLLWLACMMAF---MVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRITTMLN 251
Cdd:COG1009   194 F--SELLAAA-PTILSSPLLTLILLLLLlgaFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA 269
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 252 PTTNFMaYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQtpwSYMGATALMIAHGLTSSVLFCLAN 331
Cdd:COG1009   270 LSPVWL-TVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAG 345
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 332 SNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSSISIVLMGINII---ITALYSL 408
Cdd:COG1009   346 SVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSF 425
                         330
                  ....*....|....
gi 1823525841 409 YMLITTQRGKPTHH 422
Cdd:COG1009   426 RLFFLVFFGKPRPK 439
PRK07234 PRK07234
putative monovalent cation/H+ antiporter subunit D; Reviewed
1-339 3.87e-11

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235978 [Multi-domain]  Cd Length: 470  Bit Score: 64.97  E-value: 3.87e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841   1 MLKIIMPTTMLIPLIWLSKNK------MVWINTtAHSLMITLLSLPLLNQFNDtslNLSITYFSDSLSTPLIMLTmwllP 74
Cdd:PRK07234    6 PVWIALPFLLGFAIYLLPKLDrnlalgMAIVSA-VYALGLVASMVPLELTLLD---NFGVTLRADALSGYFILTN----A 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  75 LTIIASQFHLAKESTTRkkLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITrWGGQTERLNAGLYFLFYTL 154
Cdd:PRK07234   78 LVTLAVIFYCWESAKTR--FFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSN 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 155 VGSLPLL--VALIYLQNimGSLNIllTQLMSKPLTESwgnSLLwlacMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLA 232
Cdd:PRK07234  155 VAMLFYLigAVLVYQAN--GTFAF--SGLATADPEAF---ALI----ALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLS 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 233 AVLLKLGGYGMLRITTMLNPTTNFMAYpflmLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIqtpwsymgA 312
Cdd:PRK07234  224 GVVVKAGVFPLVRCALDVPGLDLIVRI----FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------G 291
                         330       340
                  ....*....|....*....|....*..
gi 1823525841 313 TALMIAHGLTSSVLFCLANSNYERIHS 339
Cdd:PRK07234  292 GLYALAHGLVKSTLFLCAGALPSRNFT 318
PRK12662 PRK12662
putative monovalent cation/H+ antiporter subunit D; Reviewed
143-382 1.23e-10

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 183662 [Multi-domain]  Cd Length: 492  Bit Score: 63.21  E-value: 1.23e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 143 LNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNILLTQLMSKPLTESWGNSLLWLACMMAFMVKMPLYGLHLWLPKAHVE 222
Cdd:PRK12662  159 LVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSE 238
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 223 APIAGSMVLAAVLLKLGGYGMLRIT-TMLNPTTNFMAYPF----LMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:PRK12662  239 APSFISVFFSGTSTKVMIYLIIRIVyDVFKANFVFTTLPFnnvfMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYI 318
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 298 IVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIG 377
Cdd:PRK12662  319 ILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVA 398

                  ....*
gi 1823525841 378 ELFVV 382
Cdd:PRK12662  399 KWYIL 403
PRK12650 PRK12650
DUF4040 family protein;
94-330 1.49e-10

DUF4040 family protein;


Pssm-ID: 237158 [Multi-domain]  Cd Length: 962  Bit Score: 63.52  E-value: 1.49e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  94 LYMT--MLVMLQIFLimtftATELILFYILFEATLVPTLIIITRWGGQTErlNAGLYFLFYTLVGSLPLLVALIYLQNIM 171
Cdd:PRK12650  114 LLMTafMAAMLLLVL-----ADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQT 186
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 172 GSlnillTQLMSKPLTESWGNS------LLWLACMMAFmVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLR 245
Cdd:PRK12650  187 GT-----TSLSGILHSDVWAEKpglttvVAVLIAVAAF-TKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLR 260
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 246 ITTMLNpttNFMAYPFLMLSLwGM---IMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLT 322
Cdd:PRK12650  261 FSPVFH---DVAVWNWLLIIV-GMitaLMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALF 336

                  ....*...
gi 1823525841 323 SSVLFCLA 330
Cdd:PRK12650  337 KSSLFMLI 344
PRK12644 PRK12644
putative monovalent cation/H+ antiporter subunit A; Reviewed
111-327 6.76e-10

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237154 [Multi-domain]  Cd Length: 965  Bit Score: 61.48  E-value: 6.76e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 111 TATELILFYILFEATLVPTLIIItrwGGQTERLN---AGLYFLFYTLVGSLPLLVALIYLQNIMGslnillTQLMSKPLT 187
Cdd:PRK12644  124 TSDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAG------TYRLSELLA 194
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 188 ESWGNSLLWLA--CMMAFMV-KMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRITTMLNpTTNFMAYPFLM 263
Cdd:PRK12644  195 DPPTGPAVSVAvvLILVGALsKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLAPGFA-DVPVWRPTVLV 272
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1823525841 264 LSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLF 327
Cdd:PRK12644  273 LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
PRK06589 PRK06589
putative monovalent cation/H+ antiporter subunit D; Reviewed
51-411 1.32e-09

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235835 [Multi-domain]  Cd Length: 489  Bit Score: 60.22  E-value: 1.32e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  51 NLSITYFSDSLSTPLIMLTMWLLPLTIIASQFHLAKESTTRKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTL 130
Cdd:PRK06589   74 NYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTA 153
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 131 IIITrWGGQTERLNAGLYFLFYTLVGSLPL-LVALIYLQNIMGSLNILLTQLMSKplteswGNSLLWLACMMAFMVKMPL 209
Cdd:PRK06589  154 FLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFVSGGLFSK------NQSIILLLMFIYGIAKTAI 226
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 210 YGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTML----NPTTNFMAYPFLMLSLWGMIMTSS-ICLRQTDLKS 284
Cdd:PRK06589  227 FPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIfglsYLQRIFAEFNWLIFIPIVSIFYSSlKALKTDNIKK 306
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 285 LIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASL 364
Cdd:PRK06589  307 ILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSL 386
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 1823525841 365 TNLALPPSINLIGELFVVMSSFSW-SSISIVLMGINIIITA-LYSLYML 411
Cdd:PRK06589  387 SLIGIPIFSGFISKFLILLAASEQnQPWLSIIVMLVVIASSiLSALYLL 435
PRK08377 PRK08377
NADH dehydrogenase subunit N; Validated
162-383 3.37e-09

NADH dehydrogenase subunit N; Validated


Pssm-ID: 181406 [Multi-domain]  Cd Length: 494  Bit Score: 58.62  E-value: 3.37e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 162 VALIYLQniMGSLNIL-LTQLMSK--PLTESWGNSLLWLAcmmaFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKL 238
Cdd:PRK08377  178 VALIYGA--TGTLNMAhIAQLAGTidPTVAQVGLALLIFG----LAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKA 251
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 239 GGYGMLRITTML---NPTTNFMAYPFLMLSLwGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATAL 315
Cdd:PRK08377  252 GLYAMARILYLMqnaNGWSSVLKLVIIMATL-TVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFH 330
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1823525841 316 MIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVM 383
Cdd:PRK08377  331 MINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIIL 398
PRK06525 PRK06525
hydrogenase 4 subunit D; Validated
111-371 8.65e-09

hydrogenase 4 subunit D; Validated


Pssm-ID: 180606 [Multi-domain]  Cd Length: 479  Bit Score: 57.29  E-value: 8.65e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 111 TATELILFYILFEATLVPTLIIITRWGGQtERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNILLTQLMSKPLtesw 190
Cdd:PRK06525  131 YSSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSL---- 205
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 191 gNSLLWLACMMAFMVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRITTMLNPTTNFMAYPFLMLSLWGM 269
Cdd:PRK06525  206 -KYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTL 283
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 270 IMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYM---GATALMIAHGLTSSVLFCLANSNYERIHSRTMILAR 346
Cdd:PRK06525  284 LYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGSRLaleGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLR 363
                         250       260
                  ....*....|....*....|....*
gi 1823525841 347 GLQTLLPLMAAWWLLASLTNLALPP 371
Cdd:PRK06525  364 GVLKKLPLVGVGFCVAALAITGVPP 388
PRK12663 PRK12663
Na+/H+ antiporter subunit D;
21-382 1.30e-08

Na+/H+ antiporter subunit D;


Pssm-ID: 237163 [Multi-domain]  Cd Length: 497  Bit Score: 56.88  E-value: 1.30e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  21 KMVWINTTAHSLMITLLSL-------PLLNQFNDTSLNLSITYFSDSLSTpLIMLTMWLLPLTIIASQFHLAKESTTRKK 93
Cdd:PRK12663   31 RYLAIGTLTILTLISLALLiyvqrhgPITLDFGGWLPPFGIQFTGDSLSA-LMVTTASFVATAIMAYGFGDIEHSGRRYG 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  94 LYMTMLVMLqIFLIMTFTATELILFYILFEATLVPTLIIITrWGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGS 173
Cdd:PRK12663  110 FPPFILLLM-AGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGT 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 174 LNILLTQLMSKPLTESWGNSLLWLACMMAFMVKMPLYGLHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNPT 253
Cdd:PRK12663  188 LNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQ 266
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 254 TNFMAYPFL-MLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANS 332
Cdd:PRK12663  267 ERELLHPLLaTMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGS 346
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 1823525841 333 NYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVV 382
Cdd:PRK12663  347 LVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
NuoN COG1007
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...
10-327 1.57e-08

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440631 [Multi-domain]  Cd Length: 473  Bit Score: 56.66  E-value: 1.57e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  10 MLIPLIWLSKNKMVWINTTAHSLMITLLSLpLLNQFNDTSLNLSITYFSDSLSTPLIMLTMWLLPLTIIASQFHLAKEST 89
Cdd:COG1007    21 LLLDLFLPRRSRRLLAGLALLGLLLALALL-LLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGL 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  90 TRKKLYMTMLVMLQIFLIMTFtATELILFYILFEATLVPTLIIITRWGGQTERLNAGL-YFLFYTLVGSLPLL-VALIYL 167
Cdd:COG1007   100 LRGEFYALLLFATLGMMLMAS-ANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGFLLYgISLLYG 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 168 qnIMGSLNilLTQLMSKPLTESWGNSLLWLACMM---AFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGML 244
Cdd:COG1007   179 --ATGSLN--LAGIAAALAAGGANSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAL 253
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 245 -RI-TTMLNPTTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLT 322
Cdd:COG1007   254 lRLlVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFM 333

                  ....*
gi 1823525841 323 SSVLF 327
Cdd:COG1007   334 NLGAF 338
PRK12668 PRK12668
Na(+)/H(+) antiporter subunit D;
95-327 4.74e-08

Na(+)/H(+) antiporter subunit D;


Pssm-ID: 237168 [Multi-domain]  Cd Length: 581  Bit Score: 55.29  E-value: 4.74e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  95 YMTMLVMLQIfliMTFTATELILFYilfeatlvptliiitrwgGQTERLNAGL-YFLFYTLVGSLpLLVALIYLQNIMGS 173
Cdd:PRK12668  115 LLTLFVFWEL---MAFTSTFLVWAR------------------GTKAAVRAGFrYLLVHVLGGVL-LLAGILLHYAETGS 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 174 LNILLTQLMSKPLTeswgnsllWLAcMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRittmlnpt 253
Cdd:PRK12668  173 FAFGAIAGLGGTAA--------WLI-LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR-------- 235
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1823525841 254 tnfmAYPFLMLSLW-GMIMT---SSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLF 327
Cdd:PRK12668  236 ----AFPGTELLIYiGAAMAvygVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
PRK08376 PRK08376
putative monovalent cation/H+ antiporter subunit D; Reviewed
65-371 1.08e-07

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236252 [Multi-domain]  Cd Length: 521  Bit Score: 53.95  E-value: 1.08e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  65 LIMLTMWLLPLTIIASQFHLAKESTTRKKLYMTMLVMLQIFLIMTFTAtELILFYILFEATLVPTLIIITRWGGQTERLN 144
Cdd:PRK08376   94 FMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITG-DLFNFFVFLEIMSIASYALVAFRNDTWEAIE 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 145 AGLYFLFYTLVGSLPLLVALIYLQNIMGSLNI-LLTQLMSKPLTESWGNSLLWLACMMAFmvKMPLYGLHLWLPKAHVEA 223
Cdd:PRK08376  173 AGIKYMFVGSLASSMVLLGIALLYGQYGTLNMaYLAVKMSENPTVVAKIALALFIAGLAM--KSGAVPVHMWLPDAYPAA 250
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 224 PIAGSMVLaaVLLKLGG-YGMLRIT-TMLNPTTNFMAYPFLM--LSLWGMIMTSSICLRQTDLKSLIAYSSVS---HMAL 296
Cdd:PRK08376  251 PSSISAML--LVIKQAGlYALARVLfSIYGPAINLATVGWVIiiLGCLTMFVGVAMAVVQKDVKRLLAYHSVSqigYMLL 328
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 297 ---VIVAVLIQTPWSYMGATAL------MIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNL 367
Cdd:PRK08376  329 glgVGLAALGDPAMASYGEIALaggiyhIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIV 408

                  ....
gi 1823525841 368 ALPP 371
Cdd:PRK08376  409 GLPP 412
PRK12649 PRK12649
putative monovalent cation/H+ antiporter subunit A; Reviewed
49-295 1.42e-07

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 183649 [Multi-domain]  Cd Length: 789  Bit Score: 54.06  E-value: 1.42e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  49 SLNLSITYFSDSLSTPLIMLTMWLLPLTIIASQFHLA-KESTTRkkLYMTMLVMLQIFLIMTFTATELILFyILFEATLV 127
Cdd:PRK12649   69 SAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMShKEDLPR--YYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSI 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 128 PTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNILlTQLMSKPLTESWGNSLLWLACMMAFMV-- 205
Cdd:PRK12649  146 TSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIA-TILQDSELIENIKGHPLFLITLILIFIga 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 206 --KMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRITTMLNPTTNFmaypFLMLSLWGMI---MTSSICLRQ 279
Cdd:PRK12649  225 aaKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIFSGTEAW----FILVSGTGMItmvLAGFLAFRQ 299
                         250
                  ....*....|....*.
gi 1823525841 280 TDLKSLIAYSSVSHMA 295
Cdd:PRK12649  300 TDIKAILAYSTISQLA 315
PRK12666 PRK12666
putative monovalent cation/H+ antiporter subunit D; Reviewed
137-382 1.28e-06

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237166 [Multi-domain]  Cd Length: 528  Bit Score: 50.62  E-value: 1.28e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 137 GGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNI-LLTQLMS------KPLTESwGNSLLwlacMMAFMVKMPL 209
Cdd:PRK12666  152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMaDLAQRIAqlpaadRALLEA-GAALL----LVVFLIKAAM 226
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 210 YGLHLWLPKAHVEA--PIAGsmvLAAVLLKLGGYGMLRITTML-NPTTNFMAYPFLMLSLWGMIMTSSI----CLRQTDL 282
Cdd:PRK12666  227 WPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLfGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRL 303
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 283 KSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLAnsnyERIHSRTMILARGLQTLLPLMAAWWLLA 362
Cdd:PRK12666  304 RRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA----DLVERQRGAAADRLAVTPELYDLDEEEE 379
                         250       260
                  ....*....|....*....|
gi 1823525841 363 SLTNLALPPSINLIGELFVV 382
Cdd:PRK12666  380 EEVGVAIPATMALLGLLFFI 399
PRK08042 PRK08042
formate hydrogenlyase subunit 3; Reviewed
155-378 1.79e-06

formate hydrogenlyase subunit 3; Reviewed


Pssm-ID: 181206 [Multi-domain]  Cd Length: 593  Bit Score: 50.21  E-value: 1.79e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 155 VGSLPLLVALIYLQNIMGSLNILLTQLMSKPLTEswgNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAV 234
Cdd:PRK08042  145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPL---GSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 235 LLKLGGYGMLRITTMLNPTTNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV-------IVAVLIQTP- 306
Cdd:PRK08042  222 VMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPa 301
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1823525841 307 ---WSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGE 378
Cdd:PRK08042  302 liaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGE 376
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
95-408 8.18e-05

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 45.07  E-value: 8.18e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  95 YMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSL 174
Cdd:MTH00020  113 FMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSL 192
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 175 NILLTQLMSkPLTESWGNSLLWLACMMAFMVKMPLYGLHLWLPKAH-----VEAPI-AGSMVLAAVLLKLGGYG------ 242
Cdd:MTH00020  193 DFSSVFNMV-VSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMegptpVSALIhAATMVTAGVFLLIRSSPlfeqap 271
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 243 -MLRITTMLNPTTNFMAypflmlslwgmimtSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQtpwSYMGATALMIAHGL 321
Cdd:MTH00020  272 lALIIVTIVGSLTVFFA--------------ATVGLVQNDLKKVIAYSTCSQLGYMVVACGLS---HYSISLFHLMNHAF 334
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 322 TSSVLFCLANSnyeRIHS----RTMILARGLQTLLPLMAAWWLLASLTNLALP-----PSINLIGELfvvMSSFSWSSIS 392
Cdd:MTH00020  335 FKALLFLSAGS---VIHAlsdeQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPyltgfYSKDLILEL---AFGQYYLIFA 408
                         330
                  ....*....|....*.
gi 1823525841 393 IVLMGINIIITALYSL 408
Cdd:MTH00020  409 YWLGCFSALLTAFYSI 424
ND2 MTH00196
NADH dehydrogenase subunit 2; Provisional
99-327 8.38e-05

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214453 [Multi-domain]  Cd Length: 365  Bit Score: 44.64  E-value: 8.38e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  99 LVMLQIFLIMTftATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNILL 178
Cdd:MTH00196    1 MVALGILCLIS--SSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSY 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 179 TQLMSKPLTESWGNSLLWLACMM--AFMVKMPLYGLHLWLPKAHVEAPiagsMVLAAVLLKLGGYGMLRITTMLNPTTNF 256
Cdd:MTH00196   79 INLVLNSGQSFSSVSVPIGYLLIivALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNI 154
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1823525841 257 maypFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLF 327
Cdd:MTH00196  155 ----LLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
91-301 1.37e-04

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 44.17  E-value: 1.37e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  91 RKKLYMTMLVMLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNI 170
Cdd:MTH00211  108 NINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLN 187
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 171 MGSLNILLTQLMSKPLTeswgnsLLWLACMMAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAVLLklggygM 243
Cdd:MTH00211  188 LNSWEISQLFILNLDLT------LFLLGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSallhsstMVVAGVFL------L 254
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1823525841 244 LRITTMLNPTTNFMAYPFLMLSLwGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAV 301
Cdd:MTH00211  255 IRLSPLFQNNQLILGAVLLLGAL-TMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTL 311
PRK05777 PRK05777
NADH-quinone oxidoreductase subunit NuoN;
213-323 1.78e-04

NADH-quinone oxidoreductase subunit NuoN;


Pssm-ID: 235603 [Multi-domain]  Cd Length: 476  Bit Score: 43.66  E-value: 1.78e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 213 HLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-LRITTMLNPTTNFMAYPFLM-LSLWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK05777  224 HMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLLVVAFGGLSEDWQQVLAiIAIASMLVGNLAALSQTNIKRLLAYSS 302
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1823525841 291 VSHMALVIVAVLIQTPWSYMGATALMIAHGLTS 323
Cdd:PRK05777  303 IAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
59-370 4.17e-04

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 42.64  E-value: 4.17e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  59 DSLSTPLIMLTMWLLPLTIIASQFHLAKES-TTRKKLYMTMLVMLQIFLImtfTATELILFYILFEATLVPTLIIITRWG 137
Cdd:MTH00032   79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLFTFLMMVLV---TSDNYLQLFIGWEGVGVCSYLLVAFWT 155
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 138 GQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNILLTQ-------LMSKPLTESWGNSLLW-------LACMMAF 203
Cdd:MTH00032  156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsvgsgIMDRGYYGGGAYESPLapfaiigILLLIGC 235
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 204 MVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITtmlnPTTNFMAYPFLMLSLWGMI---MTSSICLRQT 280
Cdd:MTH00032  236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 281 DLKSLIAYSSVSHMALVIVAVLIQTpwSYMGATALMIAHGLTSSVLFCLANS-----NYERIHSRTMilaRGLQTLLPLM 355
Cdd:MTH00032  312 DLKKVIAYSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAGSvihstTVDEQDMRKM---GGLIHSIPFT 386
                         330
                  ....*....|....*
gi 1823525841 356 AAWWLLASLTNLALP 370
Cdd:MTH00032  387 YTMMLIGSFSIMGLP 401
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
178-307 5.98e-04

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 42.27  E-value: 5.98e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 178 LTQLMSKPLTESWGNSLLWLACMMAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAVLLklggygMLRITTML 250
Cdd:MTH00208  221 LNEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSPLI 293
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1823525841 251 NPTTNFMAYPFLMLSLWGmIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPW 307
Cdd:MTH00208  294 SNSPWFLSLCLILGSLTA-LFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPN 349
PRK12645 PRK12645
monovalent cation/H+ antiporter subunit A; Reviewed
49-330 1.86e-03

monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237155 [Multi-domain]  Cd Length: 800  Bit Score: 40.68  E-value: 1.86e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841  49 SLNLSITYFSDSLSTPLIMLTMWLLPLTIIASQFHLAKESTTRKKLY----MTMLVMLQIFLimtftATELILFYILFEA 124
Cdd:PRK12645   67 SLGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLGNFYvyllLFMGAMLGVVL-----SDNLIVLYLFWEL 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 125 TLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNIMGSLNIllTQLMSKplTESWGNSLLWLACMMAFM 204
Cdd:PRK12645  142 TSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSI--REMIAN--ADEIQNSPLFIPAMILIL 217
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 205 V----KMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRITtmlnPTTNFMAYPFLMLSLWGMIM---TSSIC 276
Cdd:PRK12645  218 LgaftKSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFT----PIFAGSQVWFWTVTLVGLITlfwGSLNA 292
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1823525841 277 LRQTDLKSLIAYSSVSHMALVIvavliqtpwSYMGATALMIAHGLTSSVLFCLA 330
Cdd:PRK12645  293 VKQTDLKGILAFSTVSQLGLIM---------SLLGIGAASLHYQGDDSKIYAAA 337
ND2 MTH00144
NADH dehydrogenase subunit 2; Provisional
171-303 7.44e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214432 [Multi-domain]  Cd Length: 328  Bit Score: 38.33  E-value: 7.44e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1823525841 171 MGSLNILLTQLMSKPLTESWGNSLLWlacMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGMLritTML 250
Cdd:MTH00144   65 LGSSLLIFGSLIMYNLSFSWFSMSLL---LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLL---SNF 137
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1823525841 251 NPTtNFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAVLI 303
Cdd:MTH00144  138 LDL-YWLAYLLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILH 189
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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