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Conserved domains on  [gi|1812385372|gb|QID48498|]
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ATP synthase F0 subunit 6 [Bolivaritettix lativertex]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-223 2.14e-93

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 272.43  E-value: 2.14e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372   1 MMTNLFSSFDPSTNWQINLNWMSTMTFIMIIPPTFWIIKSRGNTIFNLIIHLLNKELTIILNNLNKSSTLMFIGVFMMIL 80
Cdd:MTH00157    1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  81 INNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESISNIIRPATLAIRL 160
Cdd:MTH00157   81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1812385372 161 AANMIAGHLLLTLLGNSGNHITEIVMLMLLTTQILLFMLESAVSMIQAYVFSVLSTLYSSEIN 223
Cdd:MTH00157  161 AANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-223 2.14e-93

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 272.43  E-value: 2.14e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372   1 MMTNLFSSFDPSTNWQINLNWMSTMTFIMIIPPTFWIIKSRGNTIFNLIIHLLNKELTIILNNLNKSSTLMFIGVFMMIL 80
Cdd:MTH00157    1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  81 INNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESISNIIRPATLAIRL 160
Cdd:MTH00157   81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1812385372 161 AANMIAGHLLLTLLGNSGNHITEIVMLMLLTTQILLFMLESAVSMIQAYVFSVLSTLYSSEIN 223
Cdd:MTH00157  161 AANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-223 2.30e-47

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 155.44  E-value: 2.30e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372   5 LFSSFDPSTNWQINLNWMSTMTFIMIIP------PTFWIIKSRGNTIFNLIIHLLNKELTIILNNLNKSSTLMFIGVFMM 78
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLILLLSLLIflisssLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  79 ILINNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESISNIIRPATLAI 158
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1812385372 159 RLAANMIAGHLLLTLLGNSG-NHITEIVMLMLLTTQILLFMLESAVSMIQAYVFSVLSTLYSSEIN 223
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLfSLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 65-220 3.13e-44

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 145.23  E-value: 3.13e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  65 NKSSTLMFIGVFMMILINNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCI 144
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1812385372 145 ESISNIIRPATLAIRLAANMIAGHLLLTLLGNSGNHITEIVMLMLLTTQILLFMLESAVSMIQAYVFSVLSTLYSS 220
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
71-220 4.70e-27

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 102.95  E-value: 4.70e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  71 MFIGVFMMILINNMMGLF---PYIFTSTSHLIMTLSIALPMWISLNLYG-WLNKPNHMLEHMVPQGTPSILMPFMVCIES 146
Cdd:pfam00119  60 LLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEI 139

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1812385372 147 ISNIIRPATLAIRLAANMIAGHLLLTLLGNSGNHITEIVMLMLLTT---QILLFMLESAVSMIQAYVFSVLSTLYSS 220
Cdd:pfam00119 140 ISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIPpllGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 75-218 8.29e-24

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 94.37  E-value: 8.29e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  75 VFMMILINNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYG-WLNKPNHMLEHMVPQGTPsILMPFMVCIESISNIIRP 153
Cdd:COG0356    64 LFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFP-WLAPLMLPIEIISELARP 142

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1812385372 154 ATLAIRLAANMIAGHLLLTLLGNSGNHITEIVMLMLLTtqILLFMLESAVSMIQAYVFSVLSTLY 218
Cdd:COG0356   143 LSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLLP--VAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-223 2.14e-93

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 272.43  E-value: 2.14e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372   1 MMTNLFSSFDPSTNWQINLNWMSTMTFIMIIPPTFWIIKSRGNTIFNLIIHLLNKELTIILNNLNKSSTLMFIGVFMMIL 80
Cdd:MTH00157    1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  81 INNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESISNIIRPATLAIRL 160
Cdd:MTH00157   81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1812385372 161 AANMIAGHLLLTLLGNSGNHITEIVMLMLLTTQILLFMLESAVSMIQAYVFSVLSTLYSSEIN 223
Cdd:MTH00157  161 AANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-221 3.02e-48

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 157.89  E-value: 3.02e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372   1 MMTNLFSSFDPSTNWQIN---LNWMSTMTFIMIIPPTFWIIKSRGNTIFNLIIHLLNKELTIILNNLNKSSTLMFIGVFM 77
Cdd:MTH00176    1 MLVDLFSSFDPPNKNIFSmisLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  78 MILINNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESISNIIRPATLA 157
Cdd:MTH00176   81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1812385372 158 IRLAANMIAGHLLLTLLGNSGNHITE---IVMLMLLTTQILLFMLESAVSMIQAYVFSVLSTLYSSE 221
Cdd:MTH00176  161 VRLAANLSAGHLLLGLLGAAMWGLLPvspLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDE 227
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-223 2.30e-47

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 155.44  E-value: 2.30e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372   5 LFSSFDPSTNWQINLNWMSTMTFIMIIP------PTFWIIKSRGNTIFNLIIHLLNKELTIILNNLNKSSTLMFIGVFMM 78
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLILLLSLLIflisssLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  79 ILINNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESISNIIRPATLAI 158
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1812385372 159 RLAANMIAGHLLLTLLGNSG-NHITEIVMLMLLTTQILLFMLESAVSMIQAYVFSVLSTLYSSEIN 223
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLfSLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-221 2.56e-44

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 147.96  E-value: 2.56e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372   1 MMTNLFSSFDPSTNWQIN-----LNWMSTMTFIMIIPPTFWIIKSRGNTIFNLIIHLLNKELTIILNNLNKSSTLMFIGV 75
Cdd:MTH00005    1 MLTDIFSSFDPATNSLFNnlsstAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISAL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  76 FMMILINNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESISNIIRPAT 155
Cdd:MTH00005   81 FTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPIT 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1812385372 156 LAIRLAANMIAGHLLLTLLG---NSGNHITEIVMLMLLTTQILLFMLESAVSMIQAYVFSVLSTLYSSE 221
Cdd:MTH00005  161 LSFRLAANMSAGHIVLSLIGiyaASALFSSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 65-220 3.13e-44

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 145.23  E-value: 3.13e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  65 NKSSTLMFIGVFMMILINNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCI 144
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1812385372 145 ESISNIIRPATLAIRLAANMIAGHLLLTLLGNSGNHITEIVMLMLLTTQILLFMLESAVSMIQAYVFSVLSTLYSS 220
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-222 4.37e-41

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 139.62  E-value: 4.37e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372   1 MMTNLFSSFDPSTNWQINLN---WMSTMTFIMIIPPTFWIIKSRGNTIFNLIIHLLNKELTIILNNLNKSSTLMFIGVFM 77
Cdd:MTH00173    1 MMVDLFSSFDDHNSSFSSLSflmWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  78 MILINNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESISNIIRPATLA 157
Cdd:MTH00173   81 FLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLT 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1812385372 158 IRLAANMIAGHLLLTLLGNSGN----HITEIVMLMLLTTQILLFMLESAVSMIQAYVFSVLSTLYSSEI 222
Cdd:MTH00173  161 VRLLANISAGHIVLTLIGNYLSsslfSSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDEH 229
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-221 1.06e-40

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 138.57  E-value: 1.06e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372   3 TNLFSSFDPSTNWQINLNWMSTM---TFIMIIPPTFWIIkSRGNTIFNLIIHLLnkeLTIILNNLNKSS---TLMFIGVF 76
Cdd:MTH00035    5 NSIFGQFSPDTILFIPLTLLSSVialSWLFFINPTNWLP-SRSQSIWLTFRQEI---LKLIFQNTNPNTapwAGLLTTVF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  77 MMILINNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESISNIIRPATL 156
Cdd:MTH00035   81 ILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIAL 160

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372 157 AIRLAANMIAGHLLLTLLGN-----SGNHITEIVMLMLLttqILLFMLESAVSMIQAYVFSVLSTLYSSE 221
Cdd:MTH00035  161 GLRLAANLTAGHLLIFLLSTaiwelSNSPLISIITLIIF---FLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-221 1.90e-40

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 138.03  E-value: 1.90e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372   1 MMTNLFSSFDPSTNWQINLNWMST-MTFIMIIPPTFWIIKSRGNTIFNLIIHLLNKELTIILNNLNKSSTLMFIGVFMMI 79
Cdd:MTH00120    1 MNLNFFDQFSSPELLGIPLILLAMlIPALLIPSPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  80 LINNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESISNIIRPATLAIR 159
Cdd:MTH00120   81 LLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1812385372 160 LAANMIAGHLLLTLLGNSGNHITEIVMLMLLTTQILLF---MLESAVSMIQAYVFSVLSTLYSSE 221
Cdd:MTH00120  161 LTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLlltILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-221 8.69e-40

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 136.23  E-value: 8.69e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372   1 MMTNLFSSFDPSTNWQINLNWMSTMT-FIMIIPPTFWIIKSRGNTIFNLIIHLLNKELTIILNNLNKSSTLMFIGVFMMI 79
Cdd:MTH00179    1 MMLSMFDQFESPSLLGIPLLALALLLpWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  80 LINNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESISNIIRPATLAIR 159
Cdd:MTH00179   81 LTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1812385372 160 LAANMIAGHLLLTLLGNSGNHITEIVMLMLLTTQILLFM---LESAVSMIQAYVFSVLSTLYSSE 221
Cdd:MTH00179  161 LTANITAGHLLMHLISSAVFVLMNFMGMVALLTLLVLFLltlLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-218 2.34e-37

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 130.07  E-value: 2.34e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372   1 MMTNLFSSFDPSTNWQINLNWMSTMTFIMIIPPTFWIIKSRGNTIFNLIIHLLNKELTIILNNLNKSSTLMFIGVFMMIL 80
Cdd:MTH00101    1 MNENLFASFITPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  81 INNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESISNIIRPATLAIRL 160
Cdd:MTH00101   81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1812385372 161 AANMIAGHLLLTLLGNSGNHITEIVMLMLLTTQILLF---MLESAVSMIQAYVFSVLSTLY 218
Cdd:MTH00101  161 TANITAGHLLIHLIGGATLALMSISTTTALITFIILIlltILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 1-221 6.77e-35

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 123.44  E-value: 6.77e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372   1 MMTNLFSSFDPSTNWQINLNWMS-TMTFIMIIPPTFWIIKSRGNTIFNLIIHLLNKELTIILNNLNKSSTLMFIGVFMMI 79
Cdd:MTH00132    1 MTLSFFDQFMSPTYLGIPLIALAlTLPWILFPTPTSRWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  80 LINNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESISNIIRPATLAIR 159
Cdd:MTH00132   81 ITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1812385372 160 LAANMIAGHLLLTLLGNSGNHITEIVMLMLLTTQILLFM---LESAVSMIQAYVFSVLSTLYSSE 221
Cdd:MTH00132  161 LTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLltlLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-221 1.10e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 117.76  E-value: 1.10e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372   1 MMTNLFSSFDPSTNWQINLNWMSTMTFIMIIP-PTFWIIKSRGNTIFNLIIHLLNKELTIILNNLNKSSTLMFIGVFMMI 79
Cdd:MTH00073    1 MNLSFFDQFLSPTLLGIPLIMLAMLLPWLLFPtPTNKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSLMVFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  80 LINNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESISNIIRPATLAIR 159
Cdd:MTH00073   81 ITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1812385372 160 LAANMIAGHLLLTLLGNSGNHITEI---VMLMLLTTQILLFMLESAVSMIQAYVFSVLSTLYSSE 221
Cdd:MTH00073  161 LTANLTAGHLLIQLISTATLVLLPLmptVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP-synt_A pfam00119
ATP synthase A chain;
71-220 4.70e-27

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 102.95  E-value: 4.70e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  71 MFIGVFMMILINNMMGLF---PYIFTSTSHLIMTLSIALPMWISLNLYG-WLNKPNHMLEHMVPQGTPSILMPFMVCIES 146
Cdd:pfam00119  60 LLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEI 139

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1812385372 147 ISNIIRPATLAIRLAANMIAGHLLLTLLGNSGNHITEIVMLMLLTT---QILLFMLESAVSMIQAYVFSVLSTLYSS 220
Cdd:pfam00119 140 ISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIPpllGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 37-218 4.25e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 98.19  E-value: 4.25e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  37 IIKSRGNTIFNLIIhllNKELTIILNNLNKSSTLMF---IGVFMMILINNMMGLFPYIFTSTSHLIMTLSIALPMWISLN 113
Cdd:MTH00172   40 LIPKRWQSIIEIIY---NHFHGVVKDNLGNEGLKYFpfiISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVT 116

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372 114 LYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESISNIIRPATLAIRLAANMIAGHLLLTLLGNSG-NHITEIVMLMLLTT 192
Cdd:MTH00172  117 LAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGFGfNMLCASGFLSLFPL 196

                         170       180
                  ....*....|....*....|....*...
gi 1812385372 193 QILLFM--LESAVSMIQAYVFSVLSTLY 218
Cdd:MTH00172  197 LIMVFItlLEIAVAVIQAYVFCLLTTIY 224
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 14-218 5.04e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 98.16  E-value: 5.04e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  14 NWQINLNWMSTMTFIMIIppTFWIIKSRGNTIFN---LIIHLLNKEL-TIILNNLNKSSTLMF---IGVFMMILINNMMG 86
Cdd:MTH00175   23 DWLVTFTNSSMMMVLAVI--IFWLLLKGDKLIPNrwqSIMELIYLNIrSVVHDNLGKSGQKYFpfiLSLFLFIAILNILG 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  87 LFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESISNIIRPATLAIRLAANMIA 166
Cdd:MTH00175  101 LFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISA 180

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1812385372 167 GHLLLTLL-GNSGNHIT-EIVMLMLLTTQILLF--MLESAVSMIQAYVFSVLSTLY 218
Cdd:MTH00175  181 GHLLFAILsGFAFNMLSnGLIILSLFPMLIMIFitLLEMAVAVIQAYVFCLLTTIY 236
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 75-218 8.29e-24

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 94.37  E-value: 8.29e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  75 VFMMILINNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYG-WLNKPNHMLEHMVPQGTPsILMPFMVCIESISNIIRP 153
Cdd:COG0356    64 LFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFP-WLAPLMLPIEIISELARP 142

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1812385372 154 ATLAIRLAANMIAGHLLLTLLGNSGNHITEIVMLMLLTtqILLFMLESAVSMIQAYVFSVLSTLY 218
Cdd:COG0356   143 LSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLLP--VAWTAFELLVGFLQAYIFTMLTAVY 205
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 75-218 1.34e-19

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 83.31  E-value: 1.34e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  75 VFMMILINNMMGLFP-YIFTSTSHLIMTLSIALPMWISLNLYG-WLNKPNHMLEHMVPQgtpsiLMPFMVCIESISNIIR 152
Cdd:PRK05815   79 LFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQ-----PHPLLLPIEIISEFSR 153

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1812385372 153 PATLAIRLAANMIAGHLLLTLLGnSGNHITEIVMLMLLTTQILLFMLESAVSMIQAYVFSVLSTLY 218
Cdd:PRK05815  154 PISLSLRLFGNMLAGELILALIA-LLGGAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 73-218 1.53e-16

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 75.75  E-value: 1.53e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  73 IGVFMMILINNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESISNIIR 152
Cdd:MTH00174   95 LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISR 174

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1812385372 153 PATLAIRLAANMIAGHLLLTLLG-------NSGNHITEIVMLMLLttqILLFMLESAVSMIQAYVFSVLSTLY 218
Cdd:MTH00174  175 AISLGVRLAANISSGHLLFSIIAsfawkmiNTGILIGSFVPFAIL---IFVTILEMAVAIIQAYVFTLLTIVY 244
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 75-218 5.09e-14

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 69.77  E-value: 5.09e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  75 VFMMILINNMMGLFPYIFTSTSHLIMTLSIALPMWI--------SLNLYGWLnkpnhmlEHMVpQGTPSILMPFMVCIES 146
Cdd:PRK13419  177 VFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFitqyaaikAHGIKGYL-------AHLT-GGTHWSLWIIMIPIEF 248

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1812385372 147 ISNIIRPATLAIRLAANMIAGHL-LLTLLGNSGNHITEIV-MLMLLTTQILLFMLESAVSMIQAYVFSVLSTLY 218
Cdd:PRK13419  249 IGLFTKPFALTVRLFANMTAGHIvILSLIFISFILKSYIVaVAVSVPFAIFIYLLELFVAFLQAYIFTMLSALF 322
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 93-218 6.88e-09

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 54.90  E-value: 6.88e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  93 TSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPSILMPFMVCIESI-SNIIRPATLAIRLAANMIAGH-LL 170
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHvII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1812385372 171 LTLLGNSGNHITEIVMLMLLTTQILLFMLESAVSMIQAYVFSVLSTLY 218
Cdd:PRK13417  297 LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 68-221 6.53e-08

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 50.75  E-value: 6.53e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  68 STLMFIGVFMMILINNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKpnHMLEHMVPQGTPSILMPF-MVCIES 146
Cdd:MTH00087   51 SSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKS--EKFSVYLSKGSDSFLKTFsMLFVEI 128

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1812385372 147 ISNIIRPATLAIRLAANMIAGHLLLTLLGNSGnhiteivmLMLLTTQILLFMLESAVSMIQAYVFSVLSTLYSSE 221
Cdd:MTH00087  129 VSELSRPLALTLRLTVNLMVGHLISSLLNFLG--------EKYVWLSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 57-176 1.95e-07

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 49.11  E-value: 1.95e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  57 LTIILNNLNKSSTLMFIGVFMMILINNMMGL-FPYIFTSTSHLIMTLSIALPMWISLNLYGWLNKPNHMLEHMVPQGTPS 135
Cdd:MTH00050   10 FSLIYKLILGGSVSYYYSVVLFIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPL 89

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1812385372 136 ILMPFMVCIESISNIIRPATLAIRLAANMIAGHLLLTLLGN 176
Cdd:MTH00050   90 YICPFVCIAETISYIIRPVVLILRPFINISLGCFGGVALGN 130
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 70-218 1.02e-04

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 42.04  E-value: 1.02e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385372  70 LMFIGVF-MMILINNMMGLFPYIFTSTSHLIMTLSIALPMWISLNLYG-----WLNKPNHMLehmvpqgTPS-ILMPFMV 142
Cdd:PRK13420   75 LPFVGTLwIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGiraegLREYLKHYL-------SPSpFLLPFHL 147

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1812385372 143 ciesISNIIRPATLAIRLAANMIAGHLLLTLlgnsgnhiteIVMLMLLTTQILLFMLESAVSMIQAYVFSVLSTLY 218
Cdd:PRK13420  148 ----ISEITRTLALAVRLFGNIMSLELAALL----------VLLVAGFLVPVPILMLHIIEALVQAYIFGMLALIY 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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