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Conserved domains on  [gi|1812385335|gb|QID48464|]
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NADH dehydrogenase subunit 3 [Systolederus spicupennis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009588)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 8.86e-33

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 110.72  E-value: 8.86e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335   1 MIKSMLISMFSSMMIALLMItLSMMISKKKISDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIP 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLL-LGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQ 79

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1812385335  81 IFKTSSLLYWWISSSVFIMILLMGLYYEWNEGVLKWA 117
Cdd:MTH00148   80 SLGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 8.86e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 110.72  E-value: 8.86e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335   1 MIKSMLISMFSSMMIALLMItLSMMISKKKISDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIP 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLL-LGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQ 79

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1812385335  81 IFKTSSLLYWWISSSVFIMILLMGLYYEWNEGVLKWA 117
Cdd:MTH00148   80 SLGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-115 2.27e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 93.64  E-value: 2.27e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335  20 ITLSMMISKKKiSDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIFKtSSLLYWWISSSVFIM 99
Cdd:pfam00507   1 LLLSRLLGPKR-PNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1812385335 100 ILLMGLYYEWNEGVLK 115
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 15-116 3.37e-25

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 91.72  E-value: 3.37e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335  15 IALLMITLSMMISKKKiSDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIFKTSSlLYWWISS 94
Cdd:COG0838    18 LALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELG-WFGLIEM 95

                          90       100
                  ....*....|....*....|..
gi 1812385335  95 SVFIMILLMGLYYEWNEGVLKW 116
Cdd:COG0838    96 LVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 8.86e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 110.72  E-value: 8.86e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335   1 MIKSMLISMFSSMMIALLMItLSMMISKKKISDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIP 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLL-LGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQ 79

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1812385335  81 IFKTSSLLYWWISSSVFIMILLMGLYYEWNEGVLKWA 117
Cdd:MTH00148   80 SLGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 5-116 9.64e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 107.94  E-value: 9.64e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335   5 MLISMFSSMMIALLMITLSMMISKKKISDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIFKT 84
Cdd:MTH00161    2 ILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKT 81

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1812385335  85 SSLLYWWISSSVFIMILLMGLYYEWNEGVLKW 116
Cdd:MTH00161   82 SNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 6-117 2.75e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 99.30  E-value: 2.75e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335   6 LISMFSSMMIALLMITLSMMISKKKISDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIFKTS 85
Cdd:MTH00202    5 LFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSS 84

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1812385335  86 SLLYWWISSSVFIMILLMGLYYEWNEGVLKWA 117
Cdd:MTH00202   85 WSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 5-117 8.81e-27

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 95.70  E-value: 8.81e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335   5 MLISMFSSMMIALLMITLSMMISKKKISDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIFKT 84
Cdd:MTH00012    4 MMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMT 83

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1812385335  85 SSLLYWWISSSVFIMILLMGLYYEWNEGVLKWA 117
Cdd:MTH00012   84 STSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-115 2.27e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 93.64  E-value: 2.27e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335  20 ITLSMMISKKKiSDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIFKtSSLLYWWISSSVFIM 99
Cdd:pfam00507   1 LLLSRLLGPKR-PNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1812385335 100 ILLMGLYYEWNEGVLK 115
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 5-117 2.96e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 91.48  E-value: 2.96e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335   5 MLISMFS-SMMIALLMITLSMMISKKKiSDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIFK 83
Cdd:MTH00113    2 NLISMLTiSLALSTILTTLNFWLTQTK-PDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1812385335  84 TSSLLYWWISSSVFIMILLMGLYYEWNEGVLKWA 117
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 15-116 3.37e-25

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 91.72  E-value: 3.37e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335  15 IALLMITLSMMISKKKiSDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIFKTSSlLYWWISS 94
Cdd:COG0838    18 LALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELG-WFGLIEM 95

                          90       100
                  ....*....|....*....|..
gi 1812385335  95 SVFIMILLMGLYYEWNEGVLKW 116
Cdd:COG0838    96 LVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 4-118 1.37e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 90.04  E-value: 1.37e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335   4 SMLISMFSSMMIALLMITLSMMISKKKISDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIFK 83
Cdd:MTH00042    2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1812385335  84 TSSLLYWWISSSVFIMILLMGLYYEWNEGVLKWAN 118
Cdd:MTH00042   82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 13-117 2.49e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 89.21  E-value: 2.49e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335  13 MMIALLMITLSMMIS---KKKISDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIFKTSSLLY 89
Cdd:MTH00136    8 LTITIALSLILAIVSfwlPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLL 87

                          90       100
                  ....*....|....*....|....*...
gi 1812385335  90 WWISSSVFIMILLMGLYYEWNEGVLKWA 117
Cdd:MTH00136   88 TFFWATAVLILLTLGLIYEWLQGGLEWA 115
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 5-117 1.62e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 87.36  E-value: 1.62e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335   5 MLISMFSSMMIALLMITLSMMISKKKiSDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIFKT 84
Cdd:MTH00069    2 IMLMLLISTILSLILITISFWLPLNN-PDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1812385335  85 SSLLYWWISSSVFIMILLMGLYYEWNEGVLKWA 117
Cdd:MTH00069   81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWA 113
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 15-117 1.02e-22

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 85.30  E-value: 1.02e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335  15 IALLMITLSMMISKKKiSDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIFKTSSLLYWWiSS 94
Cdd:PRK06602   21 LGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWLGFV-EA 98

                          90       100
                  ....*....|....*....|...
gi 1812385335  95 SVFIMILLMGLYYEWNEGVLKWA 117
Cdd:PRK06602   99 MIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 3-116 1.14e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 84.95  E-value: 1.14e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335   3 KSMLISMFSSMMIALLMITLSMMISKKKIsDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIF 82
Cdd:MTH00203    2 NLIMLFFLIALLLSLILLFIAFWLPKVNP-DGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1812385335  83 KTSSLLYWWISSsvFIMILLMGLYYEWNEGVLKW 116
Cdd:MTH00203   81 QLSSLSLLLAFL--FLILLTLGLIYEWLQGGLEW 112
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 5-117 8.24e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 83.07  E-value: 8.24e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335   5 MLISMFSSMMIALLMITLSMMISKKKISdREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIFKT 84
Cdd:MTH00106    3 LMLTLLTNTLLASLLVLIAFWLPQLNIY-SEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQT 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1812385335  85 SSLLYWWISSSVFIMILLMGLYYEWNEGVLKWA 117
Cdd:MTH00106   82 NNLNTMLTMALLLISLLALSLAYEWTQKGLEWT 114
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 3-116 8.65e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 77.79  E-value: 8.65e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335   3 KSMLISMFSSMMIALLMITLSMMISKKkISDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIF 82
Cdd:MTH00018    1 YGLFILLIFSVVLSALFSGASYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLY 79

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1812385335  83 KTSSLLYWWIsSSVFIMILLMGLYYEWNEGVLKW 116
Cdd:MTH00018   80 NQIAPFGFWT-MVGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 5-116 4.92e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 73.21  E-value: 4.92e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335   5 MLISMFSSMMIALLMITLSMMISKK------KISDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPL 78
Cdd:MTH00055    1 MSMEFLGIFILLLFSIGLSTVISGAsyivgvKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPW 80

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1812385335  79 IPIFKTSSLLYWWIsSSVFIMILLMGLYYEWNEGVLKW 116
Cdd:MTH00055   81 CVVYNQIGLFGFWV-MYLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 3-116 6.18e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 70.73  E-value: 6.18e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335   3 KSMLISMFSSMMIALLMITLSMMISKKKIS----DREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPL 78
Cdd:MTH00030    6 KTIFFSTLLGVGIILLLVSISFTLGNSRIGltkpDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPW 85

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1812385335  79 IPIFKTSSLLYWWISSSvFIMILLMGLYYEWNEGVLKW 116
Cdd:MTH00030   86 SIVFNQLNLFSFWIVYT-FLIVLAIGLAYEWIKGGLEW 122
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
17-116 1.65e-10

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 54.29  E-value: 1.65e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335  17 LLMITLSMMISKK---KISDREKLSPFECGFNPQTHARlPFSIQFFMISMLFLIFDIEIALMLPLIPIFKTSSlLYWWIS 93
Cdd:PRK08489   25 FLTTRLARFISRKlaqKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFPWAVDFKLLG-LFGLIE 102

                          90       100
                  ....*....|....*....|...
gi 1812385335  94 SSVFIMILLMGLYYEWNEGVLKW 116
Cdd:PRK08489  103 MLLFIVLLTIGFIYAWKKGALEW 125
ndhC CHL00022
NADH dehydrogenase subunit 3
 8-116 8.70e-10

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 52.30  E-value: 8.70e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335   8 SMFSSMMIALLMITLSMMISK---KKISDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIFKT 84
Cdd:CHL00022    9 IFWAFLIISSLIPILAFLISGllaPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDV 88

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1812385335  85 SSlLYWWISSSVFIMILLMGLYYEWNEGVLKW 116
Cdd:CHL00022   89 LG-VSAFIEALIFVLILIVGLVYAWRKGALEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
33-116 3.96e-09

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 50.51  E-value: 3.96e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335  33 DREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIFKTSSlLYWWISSSVFIMILLMGLYYEWNEG 112
Cdd:PRK07756   39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLG-LFALIEMLIFVVMLLVGLAYAWKKK 117


                  ....
gi 1812385335 113 VLKW 116
Cdd:PRK07756  118 VLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 16-116 9.36e-09

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 49.28  E-value: 9.36e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335  16 ALLMITLSMMISKKKIsDREKLSPFECGFNPQTHARLP--FSIQFFMISMLFLIFDIEIALMLPLIPIFKtSSLLYWWIS 93
Cdd:PRK07928   18 AVVSVVVASLVGPKRY-NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFD-ALGVFGLVE 95

                          90       100
                  ....*....|....*....|...
gi 1812385335  94 SSVFIMILLMGLYYEWNEGVLKW 116
Cdd:PRK07928   96 MALFMLTVFVAYAYVWRRGGLEW 118
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 32-116 8.25e-07

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 44.80  E-value: 8.25e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335  32 SDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIPIFKTSSLLYwWISSSVFIMILLMGLYYEWNE 111
Cdd:PRK06432   59 SDQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIP-FIETLIFLAMPLFAVYYAFKM 137


                  ....*
gi 1812385335 112 GVLKW 116
Cdd:PRK06432  138 GYMRW 142
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 4-116 1.08e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 38.72  E-value: 1.08e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335   4 SMLISMFSSMMIALLMITLSMMISKKKiSDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLPLIpifk 83
Cdd:MTH00092    3 VLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLL---- 77

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1812385335  84 tSSLLYWWISSSVFIMILLMGLYYEWNEGVLKW 116
Cdd:MTH00092   78 -VSDFSSLISFFMLMIFIFFGFYMEWWYGKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 31-118 1.24e-03

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 35.64  E-value: 1.24e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335  31 ISDREKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALmlpLIPIFKTSSLLYWWISSSVFIMILLMGLYYEWN 110
Cdd:MTH00060   32 SGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISL---LLNMPFQGLLFYNFWYYYFFLLLLFLGFVVELF 108


                  ....*...
gi 1812385335 111 EGVLKWAN 118
Cdd:MTH00060  109 SGYVRWVY 116
PRK06073 PRK06073
NADH dehydrogenase subunit A; Validated
 15-107 2.78e-03

NADH dehydrogenase subunit A; Validated


Pssm-ID: 235690  Cd Length: 124  Bit Score: 34.97  E-value: 2.78e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812385335  15 IALLMITLSMMISKKKISDReKLSPFECGFNPQTHARLPFSIQFFMISMLFLIFDIEIALMLpLIPIFKTSSLLYWWISS 94
Cdd:PRK06073   20 AGVGTYKLLKLILPSKPTPL-KVSRYEAGNPPTGPAKLWLPMQYYGYLLLFLTLEPIVVLLL-LIAFAPYYTFRDLLLLI 97

                          90
                  ....*....|...
gi 1812385335  95 SVFIMILLMGLYY 107
Cdd:PRK06073   98 VVALVLMYPVLYY 110
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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