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Conserved domains on  [gi|1812303514|ref|XP_032402790|]
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ubiquinone biosynthesis monooxygenase COQ6, mitochondrial [Xiphophorus hellerii]

Protein Classification

Rossmann-fold NAD(P)-binding domain-containing protein( domain architecture ID 229380)

Rossmann-fold NAD(P)-binding domain-containing protein may function as an oxidoreductase

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NADB_Rossmann super family cl21454
Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a ...
 49-477 0e+00

Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous hydrogen-bonds and van der Waals contacts, in particular H-bonding of residues in a turn between the first strand and the subsequent helix of the Rossmann-fold topology. Characteristically, this turn exhibits a consensus binding pattern similar to GXGXXG, in which the first 2 glycines participate in NAD(P)-binding, and the third facilitates close packing of the helix to the beta-strand. Typically, proteins in this family contain a second domain in addition to the NADB domain, which is responsible for specifically binding a substrate and catalyzing a particular enzymatic reaction.


The actual alignment was detected with superfamily member TIGR01989:

Pssm-ID: 473865 [Multi-domain]  Cd Length: 437  Bit Score: 560.53  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  49 YDVIISGGGMVGSAMACSLGLDPNLAGKKILLLEAGH-KKVMDRV----PDTYSTRVSSISPGSATLLSGIGAWEQVTRM 123
Cdd:TIGR01989   1 FDVVIVGGGPVGLALAAALGNNPLTKDLKVLLLDAVDnPKLKSRNyekpDGPYSNRVSSITPASISFFKKIGAWDHIQSD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 124 RCKPYKRMQVWDACSDALITFDKEDLLDEMAYIVENDIVVAAITRQL-DAMPENVQVKYKTKVVKYTWPMPHhAAESIPW 202
Cdd:TIGR01989  81 RIQPFGRMQVWDGCSLALIRFDRDNGKEDMACIIENDNIQNSLYNRLqEYNGDNVKILNPARLISVTIPSKY-PNDNSNW 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 203 VKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENNVAWQRFLPTGPIAMLPLSDTESS 282
Cdd:TIGR01989 160 VHITLSDGQVLYTKLLIGADGSNSNVRKAANIDTTGWNYNQHAVVATLKLEEATENDVAWQRFLPTGPIALLPLPDNNST 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 283 LVWSTSHHLAEELLELDEESFVDAINSAF---WSNENQSDLVETAGALFRGALSAIMPSAGSPRQLPPSVAGIGPKSRVM 359
Cdd:TIGR01989 240 LVWSTSPEEALRLLSLPPEDFVDALNAAFdlgYSDHPYSYLLDYAMEKLNEDIGFRTEGSKSCFQVPPRVIGVVDKSRAA 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 360 FPLGVGHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMT 439
Cdd:TIGR01989 320 FPLGLGHADEYVTKRVALVGDAAHRVHPLAGQGVNLGFGDVASLVKALAEAVSVGADIGSISSLKPYERERYAKNVVLLG 399

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 1812303514 440 AIDLMKRLYSTNAAPAVLLRTFGLQATNMLPTLKEQIM 477
Cdd:TIGR01989 400 LVDKLHKLYATDFPPVVALRTFGLNLTNYIGPLKNFIM 437
 
Name Accession Description Interval E-value
COQ6 TIGR01989
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase ...
 49-477 0e+00

ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone


Pssm-ID: 273914 [Multi-domain]  Cd Length: 437  Bit Score: 560.53  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  49 YDVIISGGGMVGSAMACSLGLDPNLAGKKILLLEAGH-KKVMDRV----PDTYSTRVSSISPGSATLLSGIGAWEQVTRM 123
Cdd:TIGR01989   1 FDVVIVGGGPVGLALAAALGNNPLTKDLKVLLLDAVDnPKLKSRNyekpDGPYSNRVSSITPASISFFKKIGAWDHIQSD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 124 RCKPYKRMQVWDACSDALITFDKEDLLDEMAYIVENDIVVAAITRQL-DAMPENVQVKYKTKVVKYTWPMPHhAAESIPW 202
Cdd:TIGR01989  81 RIQPFGRMQVWDGCSLALIRFDRDNGKEDMACIIENDNIQNSLYNRLqEYNGDNVKILNPARLISVTIPSKY-PNDNSNW 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 203 VKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENNVAWQRFLPTGPIAMLPLSDTESS 282
Cdd:TIGR01989 160 VHITLSDGQVLYTKLLIGADGSNSNVRKAANIDTTGWNYNQHAVVATLKLEEATENDVAWQRFLPTGPIALLPLPDNNST 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 283 LVWSTSHHLAEELLELDEESFVDAINSAF---WSNENQSDLVETAGALFRGALSAIMPSAGSPRQLPPSVAGIGPKSRVM 359
Cdd:TIGR01989 240 LVWSTSPEEALRLLSLPPEDFVDALNAAFdlgYSDHPYSYLLDYAMEKLNEDIGFRTEGSKSCFQVPPRVIGVVDKSRAA 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 360 FPLGVGHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMT 439
Cdd:TIGR01989 320 FPLGLGHADEYVTKRVALVGDAAHRVHPLAGQGVNLGFGDVASLVKALAEAVSVGADIGSISSLKPYERERYAKNVVLLG 399

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 1812303514 440 AIDLMKRLYSTNAAPAVLLRTFGLQATNMLPTLKEQIM 477
Cdd:TIGR01989 400 LVDKLHKLYATDFPPVVALRTFGLNLTNYIGPLKNFIM 437
PRK07608 PRK07608
UbiH/UbiF family hydroxylase;
49-481 1.83e-80

UbiH/UbiF family hydroxylase;


Pssm-ID: 181057 [Multi-domain]  Cd Length: 388  Bit Score: 254.88  E-value: 1.83e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  49 YDVIISGGGMVGSAMACSLGLdpnlAGKKILLLEAGHKKVMDrvPDTYSTRVSSISPGSATLLSGIGAWEQVTRMRCKPY 128
Cdd:PRK07608    6 FDVVVVGGGLVGASLALALAQ----SGLRVALLAPRAPPRPA--DDAWDSRVYAISPSSQAFLERLGVWQALDAARLAPV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 129 KRMQVW-DAcsDALITFDK-EDLLDEMAYIVENDIVVAAITRQLdAMPENVQVKYKTKVVkytWPMPHHAAEsipwvkVT 206
Cdd:PRK07608   80 YDMRVFgDA--HARLHFSAyQAGVPQLAWIVESSLIERALWAAL-RFQPNLTWFPARAQG---LEVDPDAAT------LT 147

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 207 LANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAMLPLSDTESSLVWS 286
Cdd:PRK07608  148 LADGQVLRADLVVGADGAHSWVRSQAGIKAERRPYRQTGVVANFKAERP-HRGTAYQWFRDDGILALLPLPDGHVSMVWS 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 287 TSHhlaeelleldeesfVDAINSAFWSNENQSDLVETAGALFRGALSAIMPSAGsprqlppsvagigpksrvmFPLGVGH 366
Cdd:PRK07608  227 ART--------------AHADELLALSPEALAARVERASGGRLGRLECVTPAAG-------------------FPLRLQR 273

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 367 ASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAfNGKDLGAIQHLLEYETERQRHNLPMMTAIDLMKR 446
Cdd:PRK07608  274 VDRLVAPRVALVGDAAHLIHPLAGQGMNLGLRDVAALADVLAGRE-PFRDLGDLRLLRRYERARREDILALQVATDGLQR 352

                         410       420       430
                  ....*....|....*....|....*....|....*
gi 1812303514 447 LYSTNAAPAVLLRTFGLQATNMLPTLKEQIMAYAS 481
Cdd:PRK07608  353 LFALPGPLARWLRNAGMALVGALPLVKRWLVRHAL 387
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 46-473 2.71e-56

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 190.15  E-value: 2.71e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  46 TEVYDVIISGGGMVGSAMACSLGLdpnlAGKKILLLEAghkkvmdRVPDTYSTRVSSISPGSATLLSGIGAWEQVtRMRC 125
Cdd:COG0654     1 MMRTDVLIVGGGPAGLALALALAR----AGIRVTVVER-------APPPRPDGRGIALSPRSLELLRRLGLWDRL-LARG 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 126 KPYKRMQVWDACSDALIT-FDKEDLLDEMAYIVENDIVVAAITRQLDAmpENVQVKYKTKVVKYtwpmpHHAAESipwVK 204
Cdd:COG0654    69 APIRGIRVRDGSDGRVLArFDAAETGLPAGLVVPRADLERALLEAARA--LGVELRFGTEVTGL-----EQDADG---VT 138

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 205 VTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAvlhlseptennvawqrflptgpiamlplsdtesslv 284
Cdd:COG0654   139 VTLADGRTLRADLVVGADGARSAVRRLLGIGFTGRDYPQRALWA------------------------------------ 182

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 285 wstshhlaeelleldeesfvdainsafwsnenqsdlveTAGALFRGALSAIMPSAGSPRQLPPsvagigpksRVMFPLGV 364
Cdd:COG0654   183 --------------------------------------GVRTELRARLAAAGPRLGELLELSP---------RSAFPLRR 215

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 365 GHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNGKDLGAiqhLLEYETERQRHNLPMMTAIDLM 444
Cdd:COG0654   216 RRAERWRRGRVVLLGDAAHTMHPLGGQGANLALRDAAALAWKLAAALRGRDDEAA---LARYERERRPRAARVQRAADAL 292

                         410       420
                  ....*....|....*....|....*....
gi 1812303514 445 KRLYSTNAAPAVLLRTFGLQATNMLPTLK 473
Cdd:COG0654   293 GRLFHPDSPPLRLLRNAGLRLLDRLPPLK 321
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 49-433 3.04e-12

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 67.74  E-value: 3.04e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  49 YDVIISGGGMVGSAMAcslgldpnlagkkILLLEAGHKKVM-DRVPDTYST-RVSSISPGSATLLSGIGAWEQVTRMrCK 126
Cdd:pfam01494   2 TDVLIVGGGPAGLMLA-------------LLLARAGVRVVLvERHATTSVLpRAHGLNQRTMELLRQAGLEDRILAE-GV 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 127 PYKRMQVWDACSDALITFDKEDLLDEMAYI----VENDIVVAAITRqldampeNVQVKYKTKVVKYTwpmpHHAAESIPW 202
Cdd:pfam01494  68 PHEGMGLAFYNTRRRADLDFLTSPPRVTVYpqteLEPILVEHAEAR-------GAQVRFGTEVLSLE----QDGDGVTAV 136

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 203 VKVtLANGE--TLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENNVA------WQRFLPTGPIAML 274
Cdd:pfam01494 137 VRD-RRDGEeyTVRAKYLVGCDGGRSPVRKTLGIEFEGFEGVPFGSLDVLFDAPDLSDPVErafvhyLIYAPHSRGFMVG 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 275 PLSDTESS---LVWSTSHHLAEelleldeesfvdainsafWSNEnqsdlvetagaLFRGALSAIMPSAGSPrqlPPSVAG 351
Cdd:pfam01494 216 PWRSAGREryyVQVPWDEEVEE------------------RPEE-----------FTDEELKQRLRSIVGI---DLALVE 263

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 352 IGPKSRvmFPLGVGHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSqAAFNGKdlgAIQHLLE-YETER 430
Cdd:pfam01494 264 ILWKSI--WGVASRVATRYRKGRVFLAGDAAHIHPPTGGQGLNTAIQDAFNLAWKLA-AVLRGQ---AGESLLDtYSAER 337


                  ...
gi 1812303514 431 QRH 433
Cdd:pfam01494 338 LPV 340
 
Name Accession Description Interval E-value
COQ6 TIGR01989
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase ...
 49-477 0e+00

ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone


Pssm-ID: 273914 [Multi-domain]  Cd Length: 437  Bit Score: 560.53  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  49 YDVIISGGGMVGSAMACSLGLDPNLAGKKILLLEAGH-KKVMDRV----PDTYSTRVSSISPGSATLLSGIGAWEQVTRM 123
Cdd:TIGR01989   1 FDVVIVGGGPVGLALAAALGNNPLTKDLKVLLLDAVDnPKLKSRNyekpDGPYSNRVSSITPASISFFKKIGAWDHIQSD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 124 RCKPYKRMQVWDACSDALITFDKEDLLDEMAYIVENDIVVAAITRQL-DAMPENVQVKYKTKVVKYTWPMPHhAAESIPW 202
Cdd:TIGR01989  81 RIQPFGRMQVWDGCSLALIRFDRDNGKEDMACIIENDNIQNSLYNRLqEYNGDNVKILNPARLISVTIPSKY-PNDNSNW 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 203 VKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENNVAWQRFLPTGPIAMLPLSDTESS 282
Cdd:TIGR01989 160 VHITLSDGQVLYTKLLIGADGSNSNVRKAANIDTTGWNYNQHAVVATLKLEEATENDVAWQRFLPTGPIALLPLPDNNST 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 283 LVWSTSHHLAEELLELDEESFVDAINSAF---WSNENQSDLVETAGALFRGALSAIMPSAGSPRQLPPSVAGIGPKSRVM 359
Cdd:TIGR01989 240 LVWSTSPEEALRLLSLPPEDFVDALNAAFdlgYSDHPYSYLLDYAMEKLNEDIGFRTEGSKSCFQVPPRVIGVVDKSRAA 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 360 FPLGVGHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMT 439
Cdd:TIGR01989 320 FPLGLGHADEYVTKRVALVGDAAHRVHPLAGQGVNLGFGDVASLVKALAEAVSVGADIGSISSLKPYERERYAKNVVLLG 399

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 1812303514 440 AIDLMKRLYSTNAAPAVLLRTFGLQATNMLPTLKEQIM 477
Cdd:TIGR01989 400 LVDKLHKLYATDFPPVVALRTFGLNLTNYIGPLKNFIM 437
Ubi-OHases TIGR01988
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ...
 50-481 1.80e-147

Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]


Pssm-ID: 273913 [Multi-domain]  Cd Length: 385  Bit Score: 426.62  E-value: 1.80e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  50 DVIISGGGMVGSAMACSLGLDpnlaGKKILLLEagHKKVMDRVPDTYSTRVSSISPGSATLLSGIGAWEQVTRMRCKPYK 129
Cdd:TIGR01988   1 DIVIVGGGMVGLALALALARS----GLKVALIE--ATPLPAPADPGFDNRVSALSAASIRLLEKLGVWDKIEPARAQPIR 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 130 RMQVWDACSDALITFDKEDL-LDEMAYIVENDIVVAAITRQLDAMPeNVQVKYKTKVVkytwPMPHHAaesiPWVKVTLA 208
Cdd:TIGR01988  75 DIHVSDGGSFGALRFDADEIgLEALGYVVENRVLQQALWERLQELP-NVTLLCPARVV----ELPRHS----DHVELTLD 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 209 NGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTeNNVAWQRFLPTGPIAMLPLSDTESSLVWSTS 288
Cdd:TIGR01988 146 DGQQLRARLLVGADGANSKVRQLAGIPTTGWDYGQSAVVANVKHERPH-QGTAWERFTPTGPLALLPLPDNRSSLVWTLP 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 289 HHLAEELLELDEESFVDAINSAFWSnenqsdlvetagalfrgalsaimpsagsprQLPPSVAgigPKSRVMFPLGVGHAS 368
Cdd:TIGR01988 225 PEEAERLLALSDEEFLAELQRAFGS------------------------------RLGAITL---VGERHAFPLSLTHAK 271

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 369 EYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMTAIDLMKRLY 448
Cdd:TIGR01988 272 RYVAPRLALIGDAAHTIHPLAGQGLNLGLRDVAALAEVLEDARRRGEDIGSLRVLQRYERRRRFDNAAMLGATDGLNRLF 351

                         410       420       430
                  ....*....|....*....|....*....|...
gi 1812303514 449 STNAAPAVLLRTFGLQATNMLPTLKEQIMAYAS 481
Cdd:TIGR01988 352 SNDFPPLRLLRNLGLRLLNNLPPLKNFIARYAM 384
PRK07608 PRK07608
UbiH/UbiF family hydroxylase;
49-481 1.83e-80

UbiH/UbiF family hydroxylase;


Pssm-ID: 181057 [Multi-domain]  Cd Length: 388  Bit Score: 254.88  E-value: 1.83e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  49 YDVIISGGGMVGSAMACSLGLdpnlAGKKILLLEAGHKKVMDrvPDTYSTRVSSISPGSATLLSGIGAWEQVTRMRCKPY 128
Cdd:PRK07608    6 FDVVVVGGGLVGASLALALAQ----SGLRVALLAPRAPPRPA--DDAWDSRVYAISPSSQAFLERLGVWQALDAARLAPV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 129 KRMQVW-DAcsDALITFDK-EDLLDEMAYIVENDIVVAAITRQLdAMPENVQVKYKTKVVkytWPMPHHAAEsipwvkVT 206
Cdd:PRK07608   80 YDMRVFgDA--HARLHFSAyQAGVPQLAWIVESSLIERALWAAL-RFQPNLTWFPARAQG---LEVDPDAAT------LT 147

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 207 LANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAMLPLSDTESSLVWS 286
Cdd:PRK07608  148 LADGQVLRADLVVGADGAHSWVRSQAGIKAERRPYRQTGVVANFKAERP-HRGTAYQWFRDDGILALLPLPDGHVSMVWS 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 287 TSHhlaeelleldeesfVDAINSAFWSNENQSDLVETAGALFRGALSAIMPSAGsprqlppsvagigpksrvmFPLGVGH 366
Cdd:PRK07608  227 ART--------------AHADELLALSPEALAARVERASGGRLGRLECVTPAAG-------------------FPLRLQR 273

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 367 ASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAfNGKDLGAIQHLLEYETERQRHNLPMMTAIDLMKR 446
Cdd:PRK07608  274 VDRLVAPRVALVGDAAHLIHPLAGQGMNLGLRDVAALADVLAGRE-PFRDLGDLRLLRRYERARREDILALQVATDGLQR 352

                         410       420       430
                  ....*....|....*....|....*....|....*
gi 1812303514 447 LYSTNAAPAVLLRTFGLQATNMLPTLKEQIMAYAS 481
Cdd:PRK07608  353 LFALPGPLARWLRNAGMALVGALPLVKRWLVRHAL 387
ubiF PRK08020
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
 49-480 7.45e-79

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed


Pssm-ID: 181199 [Multi-domain]  Cd Length: 391  Bit Score: 251.06  E-value: 7.45e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  49 YDVIISGGGMVGSAMAcsLGLDPNlaGKKILLLE--AGHKKVMDRVPDTystRVSSISPGSATLLSGIGAWEQVTRMRCK 126
Cdd:PRK08020    6 TDIAIVGGGMVGAALA--LGLAQH--GFSVAVLEhaAPAPFDADSQPDV---RISAISAASVALLKGLGVWDAVQAMRSH 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 127 PYKRMQVWDAcSDALITFDKEDL-LDEMAYIVENDIVVAAITRQLDAMPeNVQVKYKTKVVKYTWpmpHHAAesipWvKV 205
Cdd:PRK08020   79 PYRRLETWEW-ETAHVVFDAAELkLPELGYMVENRVLQLALWQALEAHP-NVTLRCPASLQALQR---DDDG----W-EL 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 206 TLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENnVAWQRFLPTGPIAMLPLSDTESSLVW 285
Cdd:PRK08020  149 TLADGEEIQAKLVIGADGANSQVRQMAGIGVHGWQYRQSCMLISVKCENPPGD-STWQQFTPSGPRAFLPLFDNWASLVW 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 286 STSHHLAEELLELDEESFVDAINSAFWSNenqsdlvetagalfrgaLSAIMP-SAGSprqlppsvagigpksrvmFPLGV 364
Cdd:PRK08020  228 YDSPARIRQLQAMSMAQLQQEIAAHFPAR-----------------LGAVTPvAAGA------------------FPLTR 272

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 365 GHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMTAIDLM 444
Cdd:PRK08020  273 RHALQYVQPGLALVGDAAHTINPLAGQGVNLGYRDVDALLDVLVNARSYGEAWASEAVLKRYQRRRMADNLLMQSGMDLF 352

                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 1812303514 445 KRLYSTNAAPAVLLRTFGLQATNMLPTLKEQIMAYA 480
Cdd:PRK08020  353 YAGFSNNLPPLRFARNLGLMAAQRAGVLKRQALKYA 388
PRK08850 PRK08850
2-octaprenyl-6-methoxyphenol hydroxylase; Validated
 50-480 4.81e-75

2-octaprenyl-6-methoxyphenol hydroxylase; Validated


Pssm-ID: 236341 [Multi-domain]  Cd Length: 405  Bit Score: 241.60  E-value: 4.81e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  50 DVIISGGGMVGSAMACSLGlDPNLagkKILLLEaGH--KKVMDRVPDTystRVSSISPGSATLLSGIGAWEQVTRMRCKP 127
Cdd:PRK08850    6 DVAIIGGGMVGLALAAALK-ESDL---RIAVIE-GQlpEEALNELPDV---RVSALSRSSEHILRNLGAWQGIEARRAAP 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 128 YKRMQVWDACSDALITFDKEDLLD-EMAYIVENDIVVAAITRQLDAMpENVQVKyktkvvkytwpMPHHAA-----ESIP 201
Cdd:PRK08850   78 YIAMEVWEQDSFARIEFDAESMAQpDLGHIVENRVIQLALLEQVQKQ-DNVTLL-----------MPARCQsiavgESEA 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 202 WVkvTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAMLPLSDTE- 280
Cdd:PRK08850  146 WL--TLDNGQALTAKLVVGADGANSWLRRQMDIPLTHWDYGHSALVANVRTVDP-HNSVARQIFTPQGPLAFLPMSEPNm 222

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 281 SSLVWSTSHHLAEELLELDEESFVDAINSAFwsnENQSDLVETAGAlfrgalsaimpsagsprqlppsvagigpksRVMF 360
Cdd:PRK08850  223 SSIVWSTEPLRAEALLAMSDEQFNKALTAEF---DNRLGLCEVVGE------------------------------RQAF 269

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 361 PLGVGHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMTA 440
Cdd:PRK08850  270 PLKMRYARDFVRERVALVGDAAHTIHPLAGQGVNLGLLDAASLAQEILALWQQGRDIGLKRNLRGYERWRKAEAAKMIAA 349

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|
gi 1812303514 441 IDLMKRLYSTNAAPAVLLRTFGLQATNMLPTLKEQIMAYA 480
Cdd:PRK08850  350 MQGFRDLFSGSNPAKKLVRGIGMSLAGQLPGAKDEIMKRA 389
PRK07364 PRK07364
FAD-dependent hydroxylase;
49-473 1.82e-74

FAD-dependent hydroxylase;


Pssm-ID: 236001 [Multi-domain]  Cd Length: 415  Bit Score: 240.31  E-value: 1.82e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  49 YDVIISGGGMVGSAMACSLGlDPNLagkKILLLEAGHKKVMDRVPDTYStrvssISPGSATLLSGIGAWEQVTRmRCKPY 128
Cdd:PRK07364   19 YDVAIVGGGIVGLTLAAALK-DSGL---RIALIEAQPAEAAAAKGQAYA-----LSLLSARIFEGIGVWEKILP-QIGKF 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 129 KRMQVWDACSDALITFDKEDL-LDEMAYIVENDIVVAAITRQLDAMPeNVQVKYKTKVVKYtwpmphHAAESIPWVKVTL 207
Cdd:PRK07364   89 RQIRLSDADYPGVVKFQPTDLgTEALGYVGEHQVLLEALQEFLQSCP-NITWLCPAEVVSV------EYQQDAATVTLEI 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 208 ANGE-TLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAMLPLSDTESSLVWS 286
Cdd:PRK07364  162 EGKQqTLQSKLVVAADGARSPIRQAAGIKTKGWKYWQSCVTATVKHEAP-HNDIAYERFWPSGPFAILPLPGNRCQIVWT 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 287 TSHHLAEELLELDEESFVDAINSAFWSNENQSDLVetagalfrgalsaimpsagSPRQLppsvagigpksrvmFPLGVGH 366
Cdd:PRK07364  241 APHAQAKALLALPEAEFLAELQQRYGDQLGKLELL-------------------GDRFL--------------FPVQLMQ 287

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 367 ASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMTAIDLMKR 446
Cdd:PRK07364  288 SDRYVQHRLALVGDAAHCCHPVGGQGLNLGIRDAAALAQVLQTAHQRGEDIGSLAVLKRYERWRKRENWLILGFTDLLDR 367

                         410       420
                  ....*....|....*....|....*..
gi 1812303514 447 LYSTNAAPAVLLRTFGLQATNMLPTLK 473
Cdd:PRK07364  368 LFSNQWWPLVVVRRLGLWLLRHVPPLK 394
UbiH TIGR01984
2-polyprenyl-6-methoxyphenol 4-hydroxylase; This model represents the FAD-dependent ...
 50-480 1.48e-72

2-polyprenyl-6-methoxyphenol 4-hydroxylase; This model represents the FAD-dependent monoxygenase responsible for the second hydroxylation step in the aerobic ubiquinone bioynthetic pathway. The scope of this model is limited to the proteobacteria. This family is closely related to the UbiF hydroxylase which catalyzes the final hydroxylation step. The enzyme has also been named VisB due to a mutant VISible light sensitive phenotype. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]


Pssm-ID: 273911 [Multi-domain]  Cd Length: 382  Bit Score: 234.13  E-value: 1.48e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  50 DVIISGGGMVGSAMAcsLGLDpNLAGKKILLLEAghkKVMDRVPDTYSTRVSSISPGSATLLSGIGAWEQVTRMRCkPYK 129
Cdd:TIGR01984   1 DVIIVGGGLVGLSLA--LALS-RLGKIKIALIEA---NSPSAAQPGFDARSLALSYGSKQILEKLGLWPKLAPFAT-PIL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 130 RMQVWDACSDALITFDKEDL-LDEMAYIVENDIVVAAITRQLDAMPeNVQVKYKTKVVKYTwpmpHHAAESIpwvkVTLA 208
Cdd:TIGR01984  74 DIHVSDQGHFGATHLRASEFgLPALGYVVELADLGQALLSRLALLT-NIQLYCPARYKEII----RNQDYVR----VTLD 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 209 NGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENnVAWQRFLPTGPIAMLPLSDTE-SSLVWST 287
Cdd:TIGR01984 145 NGQQLRAKLLIAADGANSKVRELLSIPTEEHDYNQTALIANIRHEQPHQG-CAFERFTPHGPLALLPLKDNYrSSLVWCL 223

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 288 SHHlaeelleldeesfvdainsafwsnenQSDLVETAG-ALFRGALSAIM-PSAGSPRQlppsvagIGPKSRvmFPLGVG 365
Cdd:TIGR01984 224 PSK--------------------------QADTIANLPdAEFLAELQQAFgWRLGKITQ-------VGERKT--YPLKLR 268

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 366 HASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAfngKDLGAIQHLLEYETERQRHNLPMMTAIDLMK 445
Cdd:TIGR01984 269 IAETHVHPRVVLIGNAAQTLHPIAGQGFNLGLRDVETLAEVLIDAR---IDLGTYALLQEYLRRRQFDQFITIGLTDGLN 345

                         410       420       430
                  ....*....|....*....|....*....|....*
gi 1812303514 446 RLYSTNAAPAVLLRTFGLQATNMLPTLKEQIMAYA 480
Cdd:TIGR01984 346 RLFSNHIPLLRALRNLGLLALENFPPLKKRLARQA 380
PRK05714 PRK05714
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
 50-473 1.31e-70

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional


Pssm-ID: 168201 [Multi-domain]  Cd Length: 405  Bit Score: 230.10  E-value: 1.31e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  50 DVIISGGGMVGSAMACSLgldpNLAGKKILLLEAGHKKVMDRVPDT-YSTRVSSISPGSATLLSGIGAWEQVTRMRCKPY 128
Cdd:PRK05714    4 DLLIVGAGMVGSALALAL----QGSGLEVLLLDGGPLSVKPFDPQApFEPRVSALSAASQRILERLGAWDGIAARRASPY 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 129 KRMQVWDACSDALITFDKEDLLDE-MAYIVENDIVVAAITRQLD----AMPENVQVKyktkvvkytwPMPHHAAEsipWV 203
Cdd:PRK05714   80 SEMQVWDGSGTGQIHFSAASVHAEvLGHIVENRVVQDALLERLHdsdiGLLANARLE----------QMRRSGDD---WL 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 204 kVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAMLPLSDTES-- 281
Cdd:PRK05714  147 -LTLADGRQLRAPLVVAADGANSAVRRLAGCATREWDYLHHAIVTSVRCSEP-HRATAWQRFTDDGPLAFLPLERDGDeh 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 282 --SLVWSTSHHLAEELLELDEESFVDAINSAFwsnENQSDLVETAgalfrgalsaimpsagsprqlppsvagigpKSRVM 359
Cdd:PRK05714  225 wcSIVWSTTPEEAERLMALDDDAFCAALERAF---EGRLGEVLSA------------------------------DPRLC 271

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 360 FPLGVGHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMT 439
Cdd:PRK05714  272 VPLRQRHAKRYVEPGLALIGDAAHTIHPLAGQGVNLGFLDAAVLAEVLLHAAERGERLADVRVLSRFERRRMPHNLALMA 351

                         410       420       430
                  ....*....|....*....|....*....|....
gi 1812303514 440 AIDLMKRLYSTNAAPAVLLRTFGLQATNMLPTLK 473
Cdd:PRK05714  352 AMEGFERLFQADPLPLRWLRNTGLKLVDQMPEAK 385
PRK08013 PRK08013
oxidoreductase; Provisional
 49-480 6.14e-70

oxidoreductase; Provisional


Pssm-ID: 236139 [Multi-domain]  Cd Length: 400  Bit Score: 228.01  E-value: 6.14e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  49 YDVIISGGGMVGSAMACSL-GldpnlAGKKILLLEaghKKVMDRVP--DTYSTRVSSISPGSATLLSGIGAWEQVTRMRC 125
Cdd:PRK08013    4 VDVVIAGGGMVGLAVACGLqG-----SGLRVAVLE---QRVPEPLAadAPPALRVSAINAASEKLLTRLGVWQDILARRA 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 126 KPYKRMQVWDACSDALITFDKEDL-LDEMAYIVENDIVVAAITRQLDAMPEnVQVkyktkvvkytwpMPHHAAESIPW-- 202
Cdd:PRK08013   76 SCYHGMEVWDKDSFGRIAFDDQSMgYSHLGHIIENSVIHYALWQKAQQSSD-ITL------------LAPAELQQVAWge 142

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 203 --VKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAMLPLSDTE 280
Cdd:PRK08013  143 neAFLTLKDGSMLTARLVVGADGANSWLRNKADIPLTFWDYQHHALVATIRTEEP-HDAVARQVFHGDGILAFLPLSDPH 221

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 281 -SSLVWSTSHHLAEELLELDEESFVDAINSAFwsnENQSDLVETAgalfrgalsaimpsagSPRQLppsvagigpksrvm 359
Cdd:PRK08013  222 lCSIVWSLSPEEAQRMQQAPEEEFNRALAIAF---DNRLGLCELE----------------SERQV-------------- 268

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 360 FPLGVGHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNGKDLGaiQHLLEYETERQR-HNLPMM 438
Cdd:PRK08013  269 FPLTGRYARQFAAHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIAELRRLHRQGKDIG--QHLYLRRYERSRkHSAALM 346

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|...
gi 1812303514 439 TA-IDLMKRLYSTNAAPAVLLRTFGLQATNMLPTLKEQIMAYA 480
Cdd:PRK08013  347 LAgMQGFRDLFAGNNPAKKLLRDIGLKLADTLPGVKPQLIRQA 389
PRK08849 PRK08849
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
 49-480 1.57e-67

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional


Pssm-ID: 181564 [Multi-domain]  Cd Length: 384  Bit Score: 221.18  E-value: 1.57e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  49 YDVIISGGGMVGSAMAcsLGLDPNlaGKKILLLEAGHKKVMDRVPDTySTRVSSISPGSATLLSGIGAWEQVTRMRCKPY 128
Cdd:PRK08849    4 YDIAVVGGGMVGAATA--LGFAKQ--GRSVAVIEGGEPKAFEPSQPM-DIRVSAISQTSVDLLESLGAWSSIVAMRVCPY 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 129 KRMQVWDAcSDALITFDKEDL-LDEMAYIVENDIVVAAITRQLDAMPeNVQVKYKTKVVKYTWPMPHHaaesipwvKVTL 207
Cdd:PRK08849   79 KRLETWEH-PECRTRFHSDELnLDQLGYIVENRLIQLGLWQQFAQYP-NLTLMCPEKLADLEFSAEGN--------RVTL 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 208 ANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAMLPLSDTESSLVWST 287
Cdd:PRK08849  149 ESGAEIEAKWVIGADGANSQVRQLAGIGITAWDYRQHCMLINVETEQP-QQDITWQQFTPSGPRSFLPLCGNQGSLVWYD 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 288 SHHLAEELleldeesfvdainSAFWSNENQSDLVetagalfrgalsaimpsagspRQLPPSVAGIGPKSRVMFPLGVGHA 367
Cdd:PRK08849  228 SPKRIKQL-------------SAMNPEQLRSEIL---------------------RHFPAELGEIKVLQHGSFPLTRRHA 273

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 368 SEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNGKDLgaiqhLLEYETERQRHNLPMMTAIDLMKRL 447
Cdd:PRK08849  274 QQYVKNNCVLLGDAAHTINPLAGQGVNLGFKDVDVLLAETEKQGVLNDAS-----FARYERRRRPDNLLMQTGMDLFYKT 348

                         410       420       430
                  ....*....|....*....|....*....|...
gi 1812303514 448 YSTNAAPAVLLRTFGLQATNMLPTLKEQIMAYA 480
Cdd:PRK08849  349 FSNSLTPLKFVRNAALKLAENSGPLKTQVLKYA 381
PRK07333 PRK07333
ubiquinone biosynthesis hydroxylase;
49-474 1.48e-66

ubiquinone biosynthesis hydroxylase;


Pssm-ID: 180935 [Multi-domain]  Cd Length: 403  Bit Score: 219.47  E-value: 1.48e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  49 YDVIISGGGMVGSAMACSL-GLDPNLagkKILLLEAGHKKVMDRVPdtystRVSSISPGSATLLSGIGAWEQVtRMRCKP 127
Cdd:PRK07333    2 CDVVIAGGGYVGLALAVALkQAAPHL---PVTVVDAAPAGAWSRDP-----RASAIAAAARRMLEALGVWDEI-APEAQP 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 128 YKRMQVWDA-CSDA----LITFDKEDLLDE-MAYIVENDIVVAAITRQLDAmpENVQVKYKTKVVKYTwPMPHHAAesip 201
Cdd:PRK07333   73 ITDMVITDSrTSDPvrpvFLTFEGEVEPGEpFAHMVENRVLINALRKRAEA--LGIDLREATSVTDFE-TRDEGVT---- 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 202 wvkVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSA-VVAVLHlsEPTENNVAWQRFLPTGPIAMLPLSDTE 280
Cdd:PRK07333  146 ---VTLSDGSVLEARLLVAADGARSKLRELAGIKTVGWDYGQSGiVCTVEH--ERPHGGRAEEHFLPAGPFAILPLKGNR 220

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 281 SSLVWSTSHHLAEELLELDEESFVDAINSAFwsnenqsdlvetagALFRGALSAImpsaGSPRQlppsvagigpksrvmF 360
Cdd:PRK07333  221 SSLVWTERTADAERLVALDDLVFEAELEQRF--------------GHRLGELKVL----GKRRA---------------F 267

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 361 PLGVGHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMTA 440
Cdd:PRK07333  268 PLGLTLARSFVAPRFALVGDAAHGIHPIAGQGLNLGLKDVAALAEVVVEAARLGLDIGSLDVLERYQRWRRFDTVRMGVT 347

                         410       420       430
                  ....*....|....*....|....*....|....
gi 1812303514 441 IDLMKRLYSTNAAPAVLLRTFGLQATNMLPTLKE 474
Cdd:PRK07333  348 TDVLNRLFSNDSTLLRSVRDIGLGLVDRLPKLKS 381
PRK08773 PRK08773
UbiH/UbiF family hydroxylase;
44-481 6.52e-66

UbiH/UbiF family hydroxylase;


Pssm-ID: 181552 [Multi-domain]  Cd Length: 392  Bit Score: 217.42  E-value: 6.52e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  44 SKTEVYDVIISGGGMVGSAmaCSLGLdpNLAGKKILLLEaGHKKVMDRvPDTYSTRVSSISPGSATLLSGIGAWEQVTRM 123
Cdd:PRK08773    2 SRRSRRDAVIVGGGVVGAA--CALAL--ADAGLSVALVE-GREPPRWQ-ADQPDLRVYAFAADNAALLDRLGVWPAVRAA 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 124 RCKPYKRMQVWDACSDALITFDKEDL-LDEMAYIVENDIVVaaiTRQLDAMPE-NVQVKYKTKVVKYTwpmPHHAAesip 201
Cdd:PRK08773   76 RAQPYRRMRVWDAGGGGELGFDADTLgREQLGWIVENDLLV---DRLWAALHAaGVQLHCPARVVALE---QDADR---- 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 202 wVKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENNvAWQRFLPTGPIAMLPLSDTES 281
Cdd:PRK08773  146 -VRLRLDDGRRLEAALAIAADGAASTLRELAGLPVSRHDYAQRGVVAFVDTEHPHQAT-AWQRFLPTGPLALLPFADGRS 223

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 282 SLVWSTSHHLAEELLELDEESFVDAINSAFwsnenqsdlvetAGALfrGALSAIMPsagsprqlppsvagigpksRVMFP 361
Cdd:PRK08773  224 SIVWTLPDAEAERVLALDEAAFSRELTQAF------------AARL--GEVRVASP-------------------RTAFP 270

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 362 LGVGHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMTAI 441
Cdd:PRK08773  271 LRRQLVQQYVSGRVLTLGDAAHVVHPLAGQGVNLGLRDVAALQQLVRQAHARRADWAAPHRLQRWARTRRSDNTVAAYGF 350

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|
gi 1812303514 442 DLMKRLYSTNAAPAVLLRTFGLQATNMLPTLKEQIMAYAS 481
Cdd:PRK08773  351 DAINRVFSNDEMHLTLLRGSVLGLAGKLPPLVDALWKRAS 390
PRK05732 PRK05732
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
 49-473 8.91e-61

2-octaprenyl-6-methoxyphenyl hydroxylase; Validated


Pssm-ID: 235584 [Multi-domain]  Cd Length: 395  Bit Score: 203.93  E-value: 8.91e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  49 YDVIISGGGMVGSAMAcsLGLDPNLAGK-KILLLEAghKKVMDRVPDTYSTRVSSISPGSATLLSGIGAWeQVTRMRCKP 127
Cdd:PRK05732    4 MDVIIVGGGMAGATLA--LALSRLSHGGlPVALIEA--FAPESDAHPGFDARAIALAAGTCQQLARLGVW-QALADCATP 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 128 YKRMQVWDACSDALITFDKEDL-LDEMAYIVENDIVVAAITRQLDAMPeNVQVKYKTKVVKYTwpmphHAAESipwVKVT 206
Cdd:PRK05732   79 ITHIHVSDRGHAGFVRLDAEDYgVPALGYVVELHDVGQRLFALLDKAP-GVTLHCPARVANVE-----RTQGS---VRVT 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 207 LANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAMLPLSDTESSLVWS 286
Cdd:PRK05732  150 LDDGETLTGRLLVAADGSHSALREALGIDWQQHPYEQVAVIANVTTSEA-HQGRAFERFTEHGPLALLPMSDGRCSLVWC 228

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 287 TSHHLAEElleldeesfVDAINSAFWSNENQSDLVETAGALFRgalsaimpsagsprqlppsvagIGPksRVMFPLGVGH 366
Cdd:PRK05732  229 HPLEDAEE---------VLSWSDAQFLAELQQAFGWRLGRITH----------------------AGK--RSAYPLALVT 275

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 367 ASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNGKDLGAIQHLLEYETERQ--RHNLPMMTaiDLM 444
Cdd:PRK05732  276 AAQQISHRLALVGNAAQTLHPIAGQGFNLGLRDVMSLAETLTQALARGEDIGDYAVLQRYQQRRQqdREATIGFT--DGL 353

                         410       420
                  ....*....|....*....|....*....
gi 1812303514 445 KRLYSTNAAPAVLLRTFGLQATNMLPTLK 473
Cdd:PRK05732  354 VRLFANRWAPLVVGRNLGLMAMDLLPPAR 382
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 46-473 2.71e-56

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 190.15  E-value: 2.71e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  46 TEVYDVIISGGGMVGSAMACSLGLdpnlAGKKILLLEAghkkvmdRVPDTYSTRVSSISPGSATLLSGIGAWEQVtRMRC 125
Cdd:COG0654     1 MMRTDVLIVGGGPAGLALALALAR----AGIRVTVVER-------APPPRPDGRGIALSPRSLELLRRLGLWDRL-LARG 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 126 KPYKRMQVWDACSDALIT-FDKEDLLDEMAYIVENDIVVAAITRQLDAmpENVQVKYKTKVVKYtwpmpHHAAESipwVK 204
Cdd:COG0654    69 APIRGIRVRDGSDGRVLArFDAAETGLPAGLVVPRADLERALLEAARA--LGVELRFGTEVTGL-----EQDADG---VT 138

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 205 VTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAvlhlseptennvawqrflptgpiamlplsdtesslv 284
Cdd:COG0654   139 VTLADGRTLRADLVVGADGARSAVRRLLGIGFTGRDYPQRALWA------------------------------------ 182

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 285 wstshhlaeelleldeesfvdainsafwsnenqsdlveTAGALFRGALSAIMPSAGSPRQLPPsvagigpksRVMFPLGV 364
Cdd:COG0654   183 --------------------------------------GVRTELRARLAAAGPRLGELLELSP---------RSAFPLRR 215

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 365 GHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNGKDLGAiqhLLEYETERQRHNLPMMTAIDLM 444
Cdd:COG0654   216 RRAERWRRGRVVLLGDAAHTMHPLGGQGANLALRDAAALAWKLAAALRGRDDEAA---LARYERERRPRAARVQRAADAL 292

                         410       420
                  ....*....|....*....|....*....
gi 1812303514 445 KRLYSTNAAPAVLLRTFGLQATNMLPTLK 473
Cdd:COG0654   293 GRLFHPDSPPLRLLRNAGLRLLDRLPPLK 321
PRK09126 PRK09126
FAD-dependent hydroxylase;
49-479 1.03e-44

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 161.26  E-value: 1.03e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  49 YDVIISGGGMVGSAMACSLGLdpnlAGKKILLLEaghkkvmdRVPDT------YSTRVSSISPGSATLLSGIGAWEQVTR 122
Cdd:PRK09126    4 SDIVVVGAGPAGLSFARSLAG----SGLKVTLIE--------RQPLAaladpaFDGREIALTHASREILQRLGAWDRIPE 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 123 MRCKPYKRMQVWDACSDALITFD-KEDLLDEMAYIVENDIVVAAITRQLDAMPeNVQVKYKTKVvkytwpmpHHAAESIP 201
Cdd:PRK09126   72 DEISPLRDAKVLNGRSPFALTFDaRGRGADALGYLVPNHLIRRAAYEAVSQQD-GIELLTGTRV--------TAVRTDDD 142

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 202 WVKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAMLPLSDTES 281
Cdd:PRK09126  143 GAQVTLANGRRLTARLLVAADSRFSATRRQLGIGADMHDFGRTMLVCRMRHELP-HHHTAWEWFGYGQTLALLPLNGHLS 221

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 282 SLVWSTSHHLaeelleldeesfVDAINSAfwsneNQSDLVETAGALFRGALSAIMPSAgsprqlppsvagigpkSRVMFP 361
Cdd:PRK09126  222 SLVLTLPPDQ------------IEALLAL-----DPEAFAAEVTARFKGRLGAMRLVS----------------SRHAYP 268

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 362 LGVGHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMTAI 441
Cdd:PRK09126  269 LVAVYAHRFVAKRFALIGDAAVGMHPVTAHGFNLGLKGQDILARLILAAARRGQDIGAASLLERYERKHRLATRPLYHAT 348

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 1812303514 442 DLMKRLYSTNAAPAVLLRTFGLQATNMLPTLKEQIMAY 479
Cdd:PRK09126  349 NAIAALYTDDRPPARLLRRAVLRAANRFPPLKQAIAKQ 386
PRK07494 PRK07494
UbiH/UbiF family hydroxylase;
44-477 4.82e-37

UbiH/UbiF family hydroxylase;


Pssm-ID: 181001 [Multi-domain]  Cd Length: 388  Bit Score: 140.04  E-value: 4.82e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  44 SKTEVYDVIISGGGMVGSAMACSLGldpnlagkkilllEAGHKKVM-DRVPDTYSTRVSSISPGSATLLSGIGAWEqvtr 122
Cdd:PRK07494    3 MEKEHTDIAVIGGGPAGLAAAIALA-------------RAGASVALvAPEPPYADLRTTALLGPSIRFLERLGLWA---- 65

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 123 mRCKPY----KRMQVWDAcSDALI-----TFDKEDL-LDEMAYIVENDIVVAAITRQLDAMPeNVQVkyktkvvkytwpm 192
Cdd:PRK07494   66 -RLAPHaaplQSMRIVDA-TGRLIrapevRFRAAEIgEDAFGYNIPNWLLNRALEARVAELP-NITR------------- 129

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 193 PHHAAESIPW----VKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVV-AVLHlSEPTEnNVAWQRFLP 267
Cdd:PRK07494  130 FGDEAESVRPredeVTVTLADGTTLSARLVVGADGRNSPVREAAGIGVRTWSYPQKALVlNFTH-SRPHQ-NVSTEFHTE 207

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 268 TGPIAMLPLSDTESSLVWstshhlaeelleldeesfVDAINSAfwsnenqsdlvETAGALFRGALSAIMP---------- 337
Cdd:PRK07494  208 GGPFTQVPLPGRRSSLVW------------------VVRPAEA-----------ERLLALSDAALSAAIEermqsmlgkl 258

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 338 SAGSPRQLppsvagigpksrvmFPLGVGHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQaafNGKDL 417
Cdd:PRK07494  259 TLEPGRQA--------------WPLSGQVAHRFAAGRTALVGEAAHVFPPIGAQGLNLGLRDVATLVEIVED---RPEDP 321

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 418 GAIQHLLEYETERQRHNLPMMTAIDLMKRLYSTNAAPAVLLRTFGLQATNMLPTLKEQIM 477
Cdd:PRK07494  322 GSAAVLAAYDRARRPDILSRTASVDLLNRSLLSDFLPVQDLRAAGLHLLYSFGPLRRLFM 381
PRK06996 PRK06996
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;
41-476 4.26e-33

UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;


Pssm-ID: 235905 [Multi-domain]  Cd Length: 398  Bit Score: 129.42  E-value: 4.26e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  41 TDCSKTEVYDVIISGGGMVGSAMACSLGLDPNLAGKKILLLEAGHKKVMDRVPdtystRVSSISPGSATLLSGIGAWEqv 120
Cdd:PRK06996    4 AASMAAPDFDIAIVGAGPVGLALAGWLARRSATRALSIALIDAREPAASANDP-----RAIALSHGSRVLLETLGAWP-- 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 121 trMRCKPYKRMQVwdacSD------ALITFDKEDLlDEMAYIVENDIVVAAITRQLDAMPenvqVKYKTKVVKYTwpmPH 194
Cdd:PRK06996   77 --ADATPIEHIHV----SQrghfgrTLIDRDDHDV-PALGYVVRYGSLVAALARAVRGTP----VRWLTSTTAHA---PA 142

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 195 HAAESIPWVKVTLANGETLQTKLLIGADGP-NSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENnVAWQRFLPTGPIAM 273
Cdd:PRK06996  143 QDADGVTLALGTPQGARTLRARIAVQAEGGlFHDQKADAGDSARRRDYGQTAIVGTVTVSAPRPG-WAWERFTHEGPLAL 221

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 274 LPLSDT---ESSLVWSTSHHLAEELLELDEESFVDAINSAFWSNenqsdlvetagalfRGALSAIMPsagsprqlppsva 350
Cdd:PRK06996  222 LPLGGPrqaDYALVWCCAPDEAARRAALPDDAFLAELGAAFGTR--------------MGRFTRIAG------------- 274

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 351 gigpksRVMFPLGVGHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNGKDLGAIQhlleyeter 430
Cdd:PRK06996  275 ------RHAFPLGLNAARTLVNGRIAAVGNAAQTLHPVAGQGLNLGLRDAHTLADALSDHGATPLALATFA--------- 339

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*....
gi 1812303514 431 QRHNLP-MMT--AIDLMKRLYSTNAAPAVLLRTFGLQATNMLPTLKEQI 476
Cdd:PRK06996  340 ARRALDrRVTigATDLLPRLFTVDSRPLAHLRGAALTALEFVPPLKHAL 388
PRK06617 PRK06617
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
 50-480 3.63e-28

2-octaprenyl-6-methoxyphenyl hydroxylase; Validated


Pssm-ID: 168629 [Multi-domain]  Cd Length: 374  Bit Score: 115.02  E-value: 3.63e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  50 DVIISGGGMVGSAMACSLGLDpnlaGKKILLLEAGHKKVMDRVPDTystRVSSISPGSATLLSGIGAWEQVTRMRCKPYK 129
Cdd:PRK06617    3 NTVILGCGLSGMLTALSFAQK----GIKTTIFESKSVKSPEFFKDI---RTTALTPHSKNFLFSIDIWEELEKFVAEMQD 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 130 RMQVWDACSDALITFDKEDLLdeMAYIVEND----IVVAAITRQ-LDAMPENVQvkyktkvvkYTWPMPHHAAESIPWvk 204
Cdd:PRK06617   76 IYVVDNKASEILDLRNDADAV--LGYVVKNSdfkkILLSKITNNpLITLIDNNQ---------YQEVISHNDYSIIKF-- 142

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 205 vtlaNGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYdQSAVVAVLHLSEPTENnVAWQRFLPTGPIAMLPLSDT-ESSL 283
Cdd:PRK06617  143 ----DDKQIKCNLLIICDGANSKVRSHYFANEIEKPY-QTALTFNIKHEKPHEN-CAMEHFLPLGPFALLPLKDQyASSV 216

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 284 VWSTShhlaeelleldeesfvdainsafwsnENQSDL-----VETAGALfrgalsaIMPSAGSprqlppSVAGIGPKSRV 358
Cdd:PRK06617  217 IWSTS--------------------------SDQAALivnlpVEEVRFL-------TQRNAGN------SLGKITIDSEI 257

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 359 M-FPLGVGHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQaafNGKdlgaiqhLLEYETERQRHNLPM 437
Cdd:PRK06617  258 SsFPLKARIANRYFHNRIVLIADTAHTVHPLAGQGLNQGIKDIEILSMIVSN---NGT-------LQEYQKLRQEDNFIM 327

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|...
gi 1812303514 438 MTAIDLMKRLYSTNAAPAVLLRTFGLQATNMLPTLKEQIMAYA 480
Cdd:PRK06617  328 YKLTDELNNIFSNYSKNLRCLRQIGFKVINNFKPIKNLITSYA 370
PRK07045 PRK07045
putative monooxygenase; Reviewed
 50-410 4.11e-13

putative monooxygenase; Reviewed


Pssm-ID: 136171 [Multi-domain]  Cd Length: 388  Bit Score: 70.71  E-value: 4.11e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  50 DVIISGGGMVGSAMACSLGLDpnlaGKKILLLEAGHKKVMDRVPDTystrvssISPGSATLLSGIGAWEQVTRMRCKPYK 129
Cdd:PRK07045    7 DVLINGSGIAGVALAHLLGAR----GHSVTVVERAARNRAQNGADL-------LKPSGIGVVRAMGLLDDVFAAGGLRRD 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 130 RMQVWDacSDALITFDKEDLLDEMAY--IVENDIVVAAITRQLDAMPeNVQVKYKTKVVKYTWPMPHHAAEsipwvkVTL 207
Cdd:PRK07045   76 AMRLYH--DKELIASLDYRSASALGYfiLIPCEQLRRLLLAKLDGLP-NVRLRFETSIERIERDADGTVTS------VTL 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 208 ANGETLQTKLLIGADGPNSMVRQK-LGIPTVKWNYDQSAVVAVLHLSEPTENNVAWQRFLPTGPIAMLPLSDTESSLVWS 286
Cdd:PRK07045  147 SDGERVAPTVLVGADGARSMIRDDvLRMPAERVPYATPMAFGTIALTDSVRECNRLYVDSNQGLAYFYPIGDQATRLVVS 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 287 tshhlaeelleldeesfvdainsaFWSNENQSDLVETAGALFRGALSAIMPSAGSPrqlppSVAGIGPKSRV-MFPLGVG 365
Cdd:PRK07045  227 ------------------------FPADEMQGYLADTTRTKLLARLNEFVGDESAD-----AMAAIGAGTAFpLIPLGRM 277

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1812303514 366 HASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQA 410
Cdd:PRK07045  278 NLDRYHKRNVVLLGDAAHSIHPITGQGMNLAIEDAGELGACLDLH 322
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 49-433 3.04e-12

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 67.74  E-value: 3.04e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  49 YDVIISGGGMVGSAMAcslgldpnlagkkILLLEAGHKKVM-DRVPDTYST-RVSSISPGSATLLSGIGAWEQVTRMrCK 126
Cdd:pfam01494   2 TDVLIVGGGPAGLMLA-------------LLLARAGVRVVLvERHATTSVLpRAHGLNQRTMELLRQAGLEDRILAE-GV 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 127 PYKRMQVWDACSDALITFDKEDLLDEMAYI----VENDIVVAAITRqldampeNVQVKYKTKVVKYTwpmpHHAAESIPW 202
Cdd:pfam01494  68 PHEGMGLAFYNTRRRADLDFLTSPPRVTVYpqteLEPILVEHAEAR-------GAQVRFGTEVLSLE----QDGDGVTAV 136

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 203 VKVtLANGE--TLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENNVA------WQRFLPTGPIAML 274
Cdd:pfam01494 137 VRD-RRDGEeyTVRAKYLVGCDGGRSPVRKTLGIEFEGFEGVPFGSLDVLFDAPDLSDPVErafvhyLIYAPHSRGFMVG 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 275 PLSDTESS---LVWSTSHHLAEelleldeesfvdainsafWSNEnqsdlvetagaLFRGALSAIMPSAGSPrqlPPSVAG 351
Cdd:pfam01494 216 PWRSAGREryyVQVPWDEEVEE------------------RPEE-----------FTDEELKQRLRSIVGI---DLALVE 263

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 352 IGPKSRvmFPLGVGHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSqAAFNGKdlgAIQHLLE-YETER 430
Cdd:pfam01494 264 ILWKSI--WGVASRVATRYRKGRVFLAGDAAHIHPPTGGQGLNTAIQDAFNLAWKLA-AVLRGQ---AGESLLDtYSAER 337


                  ...
gi 1812303514 431 QRH 433
Cdd:pfam01494 338 LPV 340
PRK06126 PRK06126
hypothetical protein; Provisional
 159-431 3.09e-08

hypothetical protein; Provisional


Pssm-ID: 235704 [Multi-domain]  Cd Length: 545  Bit Score: 56.15  E-value: 3.09e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 159 NDIVVAAITRQLDAMPENVQVKYKTKVVKYTwpmphHAAESIPWVKVTLANGETL--QTKLLIGADGPNSMVRQKLGIP- 235
Cdd:PRK06126  124 PQKYLEPILLEHAAAQPGVTLRYGHRLTDFE-----QDADGVTATVEDLDGGESLtiRADYLVGCDGARSAVRRSLGISy 198

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 236 --TVKWNYDQSAVVAVLHLSEPTENNVAWQRFLpTGPiamlplsDTESSLVwstshhlaeelleldeesfvdAINSA--F 311
Cdd:PRK06126  199 egTSGLQRDLSIYIRAPGLAALVGHDPAWMYWL-FNP-------DRRGVLV---------------------AIDGRdeW 249

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 312 W-----SNENQSDLVET-AGALFRGALsaimpsaGSPrqLPPSVAGIGPKSRVMFPlgvghASEYIRHRVALIGDAAHRV 385
Cdd:PRK06126  250 LfhqlrGGEDEFTIDDVdARAFVRRGV-------GED--IDYEVLSVVPWTGRRLV-----ADSYRRGRVFLAGDAAHLF 315

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1812303514 386 HPLAGQGVNLGFGDVACLTHLLsQAAFNGkdLGAIQHLLEYETERQ 431
Cdd:PRK06126  316 TPTGGYGMNTGIGDAVNLAWKL-AAVLNG--WAGPALLDSYEAERR 358
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
56-249 4.09e-08

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 54.59  E-value: 4.09e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  56 GGMVGSAMACSLGLdpnlAGKKILLLE----AGHKKVMDrvpdtystrvsSISPGSATLLSGIGAWEQVTRmrckPYKRM 131
Cdd:COG0644     1 AGPAGSAAARRLAR----AGLSVLLLEkgsfPGDKICGG-----------GLLPRALEELEPLGLDEPLER----PVRGA 61

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 132 QVWdACSDALITFDKEDlldEMAYIVENDIVVAAITRQldAMPENVQVKYKTKVVKYTWpmphHAAEsipwVKVTLANGE 211
Cdd:COG0644    62 RFY-SPGGKSVELPPGR---GGGYVVDRARFDRWLAEQ--AEEAGAEVRTGTRVTDVLR----DDGR----VVVRTGDGE 127

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1812303514 212 TLQTKLLIGADGPNSMVRQKLGIPTvKWNYDQSAVVAV 249
Cdd:COG0644   128 EIRADYVVDADGARSLLARKLGLKR-RSDEPQDYALAI 164
PRK06834 PRK06834
hypothetical protein; Provisional
 203-409 2.60e-06

hypothetical protein; Provisional


Pssm-ID: 235870 [Multi-domain]  Cd Length: 488  Bit Score: 49.63  E-value: 2.60e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 203 VKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENNV--------AWQRFLPTGPIAML 274
Cdd:PRK06834  133 VDVELSDGRTLRAQYLVGCDGGRSLVRKAAGIDFPGWDPTTSYLIAEVEMTEEPEWGVhrdalgihAFGRLEDEGPVRVM 212

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 275 PlsdTESSLVWSTShhlaeelleldeesfvdainsafwsnENQSDLvetagalfRGALSAIMPS---AGSPRQLppsvag 351
Cdd:PRK06834  213 V---TEKQVGATGE--------------------------PTLDDL--------REALIAVYGTdygIHSPTWI------ 249

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1812303514 352 igpkSRvmFPLGVGHASEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQ 409
Cdd:PRK06834  250 ----SR--FTDMARQAASYRDGRVLLAGDAAHVHSPVGGQGLNTGVQDAVNLGWKLAQ 301
PTZ00367 PTZ00367
squalene epoxidase; Provisional
 48-409 3.78e-06

squalene epoxidase; Provisional


Pssm-ID: 240384 [Multi-domain]  Cd Length: 567  Bit Score: 49.46  E-value: 3.78e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  48 VYDVIISGGGMVGSAMACSLGldpnLAGKKILLLEaghkKVMDRVPDtystRVSS--ISPGSATLLSGIGAWEQVTR--M 123
Cdd:PTZ00367   33 DYDVIIVGGSIAGPVLAKALS----KQGRKVLMLE----RDLFSKPD----RIVGelLQPGGVNALKELGMEECAEGigM 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 124 RCK--------------PYK-----------------RMQVWDACSDAlitfdkedlldemAYIVENdIVVAAITRQLDA 172
Cdd:PTZ00367  101 PCFgyvvfdhkgkqvklPYGagasgvsfhfgdfvqnlRSHVFHNCQDN-------------VTMLEG-TVNSLLEEGPGF 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 173 MPENVQVKYkTKVVKYTWPMPHHAAESIPWVKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVL-- 250
Cdd:PTZ00367  167 SERAYGVEY-TEAEKYDVPENPFREDPPSANPSATTVRKVATAPLVVMCDGGMSKFKSRYQHYTPASENHSHFVGLVLkn 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 251 -HLSEPTENNVAwqrFLPTGPIAMLPLSDTESSLVwstshhlaeelleldeesfVDAINSAFWSNENQSD--LVETAGAL 327
Cdd:PTZ00367  246 vRLPKEQHGTVF---LGKTGPILSYRLDDNELRVL-------------------VDYNKPTLPSLEEQSEwlIEDVAPHL 303

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 328 ---FRGALSAIMPSAGSPRQLPpsVAGIGPKsrvmFPLGVGhaseyirhrVALIGDAAHRVHPLAGQGVNLGFGDVACLT 404
Cdd:PTZ00367  304 penMRESFIRASKDTKRIRSMP--NARYPPA----FPSIKG---------YVGIGDHANQRHPLTGGGMTCCFSDCIRLA 368


                  ....*
gi 1812303514 405 HLLSQ 409
Cdd:PTZ00367  369 KSLTG 373
PRK06753 PRK06753
hypothetical protein; Provisional
 51-433 5.18e-06

hypothetical protein; Provisional


Pssm-ID: 168661 [Multi-domain]  Cd Length: 373  Bit Score: 48.53  E-value: 5.18e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  51 VIISGGGMVGSAMAcslgldpnlagkkILLLEAGHK-KVMDRVPdtystrvsSISPGSAtllsGIGAWEQVTrmrckpyK 129
Cdd:PRK06753    3 IAIIGAGIGGLTAA-------------ALLQEQGHEvKVFEKNE--------SVKEVGA----GIGIGDNVI-------K 50

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 130 RMQVWDaCSDALITFDKEdlLDEMAYIVENDIVVAAITrqLDAMPENVQVKYKT--KVVKYtwpmpHHAAESIPW----- 202
Cdd:PRK06753   51 KLGNHD-LAKGIKNAGQI--LSTMNLLDDKGTLLNKVK--LKSNTLNVTLHRQTliDIIKS-----YVKEDAIFTgkevt 120

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 203 --------VKVTLANGETLQTKLLIGADGPNSMVRQKLGiPTVKWNYDQ----SAVVAVLHLSEPtenNVAWQRFLPTGP 270
Cdd:PRK06753  121 kienetdkVTIHFADGESEAFDLCIGADGIHSKVRQSVN-ADSKVRYQGytcfRGLIDDIDLKLP---DCAKEYWGTKGR 196

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 271 IAMLPLSDTEssLVWSTShhlaeelleldeesfvdaINSAFWSNENQSDLVETAGALFRGALSAImpsagspRQLPPSVA 350
Cdd:PRK06753  197 FGIVPLLNNQ--AYWFIT------------------INAKERDPKYSSFGKPHLQAYFNHYPNEV-------REILDKQS 249

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 351 GIGPKSRVMF---PLgvghaSEYIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAAFNgkdlgaiQHLLEYE 427
Cdd:PRK06753  250 ETGILHHDIYdlkPL-----KSFVYGRIVLLGDAAHATTPNMGQGAGQAMEDAIVLANCLNAYDFE-------KALQRYD 317


                  ....*.
gi 1812303514 428 TERQRH 433
Cdd:PRK06753  318 KIRVKH 323
PRK06184 PRK06184
hypothetical protein; Provisional
 205-431 1.76e-05

hypothetical protein; Provisional


Pssm-ID: 235728 [Multi-domain]  Cd Length: 502  Bit Score: 47.29  E-value: 1.76e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 205 VTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQS-AVVAVLHLS--EPTennvAWQRFLP--TGPIAMLPLSDT 279
Cdd:PRK06184  147 AGPAGEETVRARYLVGADGGRSFVRKALGIGFPGETLGIDrMLVADVSLTglDRD----AWHQWPDgdMGMIALCPLPGT 222

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 280 EsslvwstshhlaeelleldeesfvdainsafwsnenqsdlvetagaLFRgaLSAIMPSAGSPrqlPPSVAGI------- 352
Cdd:PRK06184  223 D----------------------------------------------LFQ--IQAPLPPGGEP---DLSADGLtallaer 251

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 353 --GPKSRV-------MFPLGVGHASEYIRHRVALIGDAAHrVHPLAG-QGVNLGFgdvaclthllsQAAFN-GKDLGAI- 420
Cdd:PRK06184  252 tgRTDIRLhsvtwasAFRMNARLADRYRVGRVFLAGDAAH-VHPPAGgQGLNTSV-----------QDAYNlGWKLAAVl 319

                         250
                  ....*....|....*.
gi 1812303514 421 ----QHLLE-YETERQ 431
Cdd:PRK06184  320 agapEALLDtYEEERR 335
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
374-459 1.97e-05

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 46.82  E-value: 1.97e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 374 RVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSqAAFNGKdlgAIQHLLE-YETERQRHNLPMMTAIDLMKRLYSTNA 452
Cdd:PRK06183  287 RVLLAGDAAHLMPPFAGQGMNSGIRDAANLAWKLA-AVLRGR---AGDALLDtYEQERRPHARAMIDLAVRLGRVICPTD 362


                  ....*..
gi 1812303514 453 APAVLLR 459
Cdd:PRK06183  363 RLAAALR 369
PRK07190 PRK07190
FAD-binding protein;
206-235 2.70e-05

FAD-binding protein;


Pssm-ID: 235955 [Multi-domain]  Cd Length: 487  Bit Score: 46.35  E-value: 2.70e-05
                          10        20        30
                  ....*....|....*....|....*....|
gi 1812303514 206 TLANGETLQTKLLIGADGPNSMVRQKLGIP 235
Cdd:PRK07190  145 TLSNGERIQSRYVIGADGSRSFVRNHFNVP 174
PRK02106 PRK02106
choline dehydrogenase; Validated
 44-84 1.48e-04

choline dehydrogenase; Validated


Pssm-ID: 235000 [Multi-domain]  Cd Length: 560  Bit Score: 44.44  E-value: 1.48e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1812303514  44 SKTEVYDVIISGGGMVGSAMACSLGLDPNlagKKILLLEAG 84
Cdd:PRK02106    1 MTTMEYDYIIIGAGSAGCVLANRLSEDPD---VSVLLLEAG 38
PRK06847 PRK06847
hypothetical protein; Provisional
 46-411 5.07e-04

hypothetical protein; Provisional


Pssm-ID: 235874 [Multi-domain]  Cd Length: 375  Bit Score: 42.17  E-value: 5.07e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514  46 TEVYDVIISGGGMVGSAMACSLGLdpnlAGKKILLLEaghkkvMDRVPDTYSTrvsSISPGSATL--LSGIGAWEQVTRM 123
Cdd:PRK06847    2 AAVKKVLIVGGGIGGLSAAIALRR----AGIAVDLVE------IDPEWRVYGA---GITLQGNALraLRELGVLDECLEA 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 124 RCkPYKRMQVWDACSDALITFDKEDLLDE-------MAYIVENDIVVAAiTRQLDampenVQVKYKTKVVKYTwpmphHA 196
Cdd:PRK06847   69 GF-GFDGVDLFDPDGTLLAELPTPRLAGDdlpggggIMRPALARILADA-ARAAG-----ADVRLGTTVTAIE-----QD 136

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 197 AESipwVKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNY-DQSAVVAVLHLSEPTENNVAWQRflPTGPIAMLP 275
Cdd:PRK06847  137 DDG---VTVTFSDGTTGRYDLVVGADGLYSKVRSLVFPDEPEPEYtGQGVWRAVLPRPAEVDRSLMYLG--PTTKAGVVP 211

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1812303514 276 LSDTESSLvwstshhlaeelleldeesFVDainsafwSNENQSDLVETAgALFRgALSAIMPSAGSPrQLPPSVAGIGPK 355
Cdd:PRK06847  212 LSEDLMYL-------------------FVT-------EPRPDNPRIEPD-TLAA-LLRELLAPFGGP-VLQELREQITDD 262

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1812303514 356 SRVMF-PLGvGHASE--YIRHRVALIGDAAHRVHPLAGQGVNLGFGDVACLTHLLSQAA 411
Cdd:PRK06847  263 AQVVYrPLE-TLLVPapWHRGRVVLIGDAAHATTPHLAQGAGMAIEDAIVLAEELARHD 320
BetA COG2303
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ...
 46-97 5.52e-04

Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441878 [Multi-domain]  Cd Length: 531  Bit Score: 42.51  E-value: 5.52e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1812303514  46 TEVYDVIISGGGMVGSAMACSLGLDPnlaGKKILLLEAG--HKKVMDRVPDTYS 97
Cdd:COG2303     2 LEEYDYVIVGAGSAGCVLANRLSEDA---GLRVLLLEAGgrDDDPLIRMPAGYA 52
PRK06185 PRK06185
FAD-dependent oxidoreductase;
377-421 7.28e-03

FAD-dependent oxidoreductase;


Pssm-ID: 235729 [Multi-domain]  Cd Length: 407  Bit Score: 38.69  E-value: 7.28e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 1812303514 377 LIGDAAHRVHPLAGQGVNLGFGD-VACLTHL---LSQAAFNGKDLGAIQ 421
Cdd:PRK06185  288 CIGDAAHAMSPVGGVGINLAIQDaVAAANILaepLRRGRVSDRDLAAVQ 336
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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