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Conserved domains on  [gi|1811917606|gb|QID03856|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Atractomorpha psittacina]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 7-114 3.72e-39

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 126.81  E-value: 3.72e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   7 SLVISIMIPAMVMFLSKPLSKKN-NDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILPAMITMKSSNM 85
Cdd:MTH00161    5 ILLIILLISIILMILASLLSKKSiMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNM 84

                          90       100
                  ....*....|....*....|....*....
gi 1811917606  86 LIWSCSMSTFMVILLLGLYHEWNQGALKW 114
Cdd:MTH00161   85 MSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 7-114 3.72e-39

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 126.81  E-value: 3.72e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   7 SLVISIMIPAMVMFLSKPLSKKN-NDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILPAMITMKSSNM 85
Cdd:MTH00161    5 ILLIILLISIILMILASLLSKKSiMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNM 84

                          90       100
                  ....*....|....*....|....*....
gi 1811917606  86 LIWSCSMSTFMVILLLGLYHEWNQGALKW 114
Cdd:MTH00161   85 MSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-113 4.60e-31

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 105.58  E-value: 4.60e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606  19 MFLSKPLSKKNNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILP-AMITMKSSNMLIWscSMSTFMV 97
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPwAVSFRELGWFGFV--EMLIFIA 78

                          90
                  ....*....|....*.
gi 1811917606  98 ILLLGLYHEWNQGALK 113
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-114 1.64e-29

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 102.51  E-value: 1.64e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   8 LVISIMIPAMVMFLSKPLSKKNNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILPAMITMKSSNMLI 87
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFG 91

                          90       100
                  ....*....|....*....|....*..
gi 1811917606  88 WScSMSTFMVILLLGLYHEWNQGALKW 114
Cdd:COG0838    92 LI-EMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 7-114 3.72e-39

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 126.81  E-value: 3.72e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   7 SLVISIMIPAMVMFLSKPLSKKN-NDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILPAMITMKSSNM 85
Cdd:MTH00161    5 ILLIILLISIILMILASLLSKKSiMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNM 84

                          90       100
                  ....*....|....*....|....*....
gi 1811917606  86 LIWSCSMSTFMVILLLGLYHEWNQGALKW 114
Cdd:MTH00161   85 MSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 1.18e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 123.04  E-value: 1.18e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   1 MMTTSSSLVISIMIPAMVMFLSKPLSKK-NNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILPAMIT 79
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRsYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1811917606  80 MKSSNMLIWSCSMSTFMVILLLGLYHEWNQGALKWAE 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 1.12e-35

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 118.17  E-value: 1.12e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   1 MMTTSSSLVISIMIPAMVMFLSKPLSKK-NNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILPAMIT 79
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRsLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1811917606  80 MKSSNMLIWSCSMSTFMVILLLGLYHEWNQGALKWAE 116
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 2.52e-31

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 106.99  E-value: 2.52e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   1 MMTTSSSLVISIMIPAMVMFLSKPLSKKNNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILPAMITM 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1811917606  81 KSSNMLIWSCSMSTFMVILLLGLYHEWNQGALKWAE 116
Cdd:MTH00042   81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-113 4.60e-31

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 105.58  E-value: 4.60e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606  19 MFLSKPLSKKNNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILP-AMITMKSSNMLIWscSMSTFMV 97
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPwAVSFRELGWFGFV--EMLIFIA 78

                          90
                  ....*....|....*.
gi 1811917606  98 ILLLGLYHEWNQGALK 113
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 8-116 1.02e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 102.76  E-value: 1.02e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   8 LVISIMIPAMVMFLSKPLSKKNNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILP---AMITMKSSN 84
Cdd:MTH00069    6 LLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPtpwASQLNTPTN 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1811917606  85 MLIWScsmSTFMVILLLGLYHEWNQGALKWAE 116
Cdd:MTH00069   86 TLFWS---TLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 1.11e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 102.65  E-value: 1.11e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   2 MTTSSSLVISIMIPAMVMFLSKPLSKKNNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILP---AMI 78
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPlpwAIN 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1811917606  79 TMKSSNMLIWScsmSTFMVILLLGLYHEWNQGALKWA 115
Cdd:MTH00113   81 LTTPTTTLTWA---TIILTLLTLGLIYEWLQGGLEWA 114
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-114 1.64e-29

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 102.51  E-value: 1.64e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   8 LVISIMIPAMVMFLSKPLSKKNNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILPAMITMKSSNMLI 87
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFG 91

                          90       100
                  ....*....|....*....|....*..
gi 1811917606  88 WScSMSTFMVILLLGLYHEWNQGALKW 114
Cdd:COG0838    92 LI-EMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 3.15e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 101.53  E-value: 3.15e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   1 MMTTSSSLVISIMIPAMVMFLSKPLSKKNNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILP---AM 77
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPlpwGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1811917606  78 ITMKSSNMLIWScsmSTFMVILLLGLYHEWNQGALKWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWA---TAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-115 6.53e-29

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 101.09  E-value: 6.53e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   1 MMTTSSSLVISIMIPAMVMFLSKPL-SKKNNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILPAMIT 79
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLaARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1811917606  80 MKSSNMLIWSCSMSTFMVILLLGLYHEWNQGALKWA 115
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 3.15e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 99.20  E-value: 3.15e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   1 MMTTSSSLVISIMIPAMVMFLSKPLSKKNNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILPAMITM 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1811917606  81 KSSNMLIWscSMSTFMVILLLGLYHEWNQGALKW 114
Cdd:MTH00203   81 QLSSLSLL--LAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 2-116 1.30e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 95.01  E-value: 1.30e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   2 MTTSSSLVISIMIPAMVMFLSKPLSKKNNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILP---AMI 78
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPlpwASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1811917606  79 TMKSSNMLIwscsMSTFMVILL-LGLYHEWNQGALKWAE 116
Cdd:MTH00106   81 TNNLNTMLT----MALLLISLLaLSLAYEWTQKGLEWTE 115
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 8-115 2.82e-26

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 94.16  E-value: 2.82e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   8 LVISIMIPAMVMFLSKPLSKKNNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILPAMITMKSSNML- 86
Cdd:PRK06602   15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWLg 94

                          90       100
                  ....*....|....*....|....*....
gi 1811917606  87 IWscSMSTFMVILLLGLYHEWNQGALKWA 115
Cdd:PRK06602   95 FV--EAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 8-114 6.96e-23

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 85.50  E-value: 6.96e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   8 LVISIMIPAMVMFLSKPLSKKNNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILPAMITMKSSNMLI 87
Cdd:MTH00018    7 LIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFG 86

                          90       100
                  ....*....|....*....|....*..
gi 1811917606  88 WScSMSTFMVILLLGLYHEWNQGALKW 114
Cdd:MTH00018   87 FW-TMVGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 8-114 1.00e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 80.14  E-value: 1.00e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   8 LVISIMIPAMVMFLSKPLSKKNNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILPAMITMKSSNML- 86
Cdd:MTH00055   12 LLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFg 91

                          90       100
                  ....*....|....*....|....*...
gi 1811917606  87 IWscSMSTFMVILLLGLYHEWNQGALKW 114
Cdd:MTH00055   92 FW--VMYLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 31-114 4.10e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 71.12  E-value: 4.10e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606  31 DREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILPAMITMKSSNMLIWSCsMSTFMVILLLGLYHEWNQG 110
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSFWI-VYTFLIVLAIGLAYEWIKG 118


                  ....
gi 1811917606 111 ALKW 114
Cdd:MTH00030  119 GLEW 122
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
9-114 6.83e-13

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 60.45  E-value: 6.83e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   9 VISIMIPAMVMFLSKPLSKKNNDREKSSPFECGFDPKSSARMpLSIQFFLIAVIFLIFDIEIALILPAMITMKSSNMLIW 88
Cdd:PRK08489   22 VAFFLTTRLARFISRKLAQKNTEKLKLAIYECGPEPVKQPNR-ISSHFYIMALLFILFDVEIVFMFPWAVDFKLLGLFGL 100

                          90       100
                  ....*....|....*....|....*.
gi 1811917606  89 sCSMSTFMVILLLGLYHEWNQGALKW 114
Cdd:PRK08489  101 -IEMLLFIVLLTIGFIYAWKKGALEW 125
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
8-114 2.38e-10

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 53.59  E-value: 2.38e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   8 LVISIMIPAMVMFLSKPLSKKNNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILPAMITMKSSNMLI 87
Cdd:PRK07756   16 LLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFA 95

                          90       100
                  ....*....|....*....|....*..
gi 1811917606  88 WsCSMSTFMVILLLGLYHEWNQGALKW 114
Cdd:PRK07756   96 L-IEMLIFVVMLLVGLAYAWKKKVLQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 8-114 5.47e-09

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 49.89  E-value: 5.47e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606   8 LVISIMIPAMVMFLSKPLSKKNNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILPAMITMKSSNMLI 87
Cdd:MTH00092    8 FLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVSDFSSLISF 87

                          90       100
                  ....*....|....*....|....*..
gi 1811917606  88 WscsmsTFMVILLLGLYHEWNQGALKW 114
Cdd:MTH00092   88 F-----MLMIFIFFGFYMEWWYGKLIW 109
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 31-114 1.18e-08

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 49.28  E-value: 1.18e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606  31 DREKSSPFECGFDPKSSA----RMPlsIQFFLIAVIFLIFDIEIALILPAMITMKSSNM--LIwscSMSTFMVILLLGLY 104
Cdd:PRK07928   34 NRAKLEAYECGIEPTPQPagggRFP--VKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVfgLV---EMALFMLTVFVAYA 108

                          90
                  ....*....|
gi 1811917606 105 HEWNQGALKW 114
Cdd:PRK07928  109 YVWRRGGLEW 118
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 31-114 3.76e-05

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 40.18  E-value: 3.76e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606  31 DREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILPAMITMKSSNMLIWSCSMsTFMVILLLGLYHEWNQG 110
Cdd:PRK06432   60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPFIETL-IFLAMPLFAVYYAFKMG 138


                  ....
gi 1811917606 111 ALKW 114
Cdd:PRK06432  139 YMRW 142
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 29-114 1.63e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.95  E-value: 1.63e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1811917606  29 NNDREKSSPFECGFDPKSSARMPLSIQFFLIAVIFLIFDIEIALILpamitmkssNMLIWSCSMST------FMVILLLG 102
Cdd:MTH00060   32 SGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLL---------NMPFQGLLFYNfwyyyfFLLLLFLG 102

                          90
                  ....*....|..
gi 1811917606 103 LYHEWNQGALKW 114
Cdd:MTH00060  103 FVVELFSGYVRW 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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